Rh5AG272100

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000236
Physical Location & Seq
Reverse (-)
36248638 .. 36309844
61207 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG272100.1

Sequence Viewer

Length: 2370 bp
ATGCTACTCAAGATGGGGCCATTCGGTCCGTTATCAACGGATGGAACAACAGAGGCTTTTACTATGAAGCTTGTGAAAAGTTCAGTATTTAGCTATGAGCAAGCATGGCACAGATTGATATACATTCGAGTAACAGGAATGGATGATGGGTTAGACATCAAGGAGAGAATTTGTTATCTTGGTTCTGAATTCAAAAATCGAAGTATAGCTCAAACGTTGCCCGATGAAGAAGTGAGAGCTTTTAAGCAAGTAGCAAAAAAGTTGGGGTTAAACCTTGGATATCCTGGAGTGTTCTTAGATGGCTCATTCTGCAACCAGAGCTTATTTCTTGGCATCGGCTGTAACTGCACTTTTCAAAACGACACCATCTGCCATATCAGAAAAATTGAACTGAGTGCTAGCAGTTTGACTGGAGTTATACCTGATGAACTGGCCAATCTCACACATCTAGAGAGCCTGGATCTCAGTATGAATCAATTGACTGGTTCCATACCTGCTAGCTTGGGGAATTTATCTTGGCTCAATGACCTGGATATTTCAAACAATCAATTGATCGGGTCCATTCCAGAGAGTTTGGGGAATATAAAACTTCAAGCGCACTACTCCAATAAGAAGGTTGACATGATTCGGGAATACTTTTATCTGGATCTTTCAAGCAATCATTTGAGTGGATCCATACCCGTCACTTTAGGGAAGTTGGCTGTCCCATCGGCTGCCGACAGCGGATCGCCCCTAGCGCTCTCCCTGGATCTTTCAAACAATCAATTGACTGGGCCTATACCAGAGAGCTTAGGGAATTTGACTTTTGGGACCATATATATTTATCTGTACGACAACTTTCTCAGCGGCTCTATACCAGCATCTTTGGGTGCATTGTCTCATCTCTGGACACTGGATTTGCATAACAATGGAATCTTTGGTACTCTCCCACAGACGCTTGGAAATTTGACATACCTTGAACGCTTCACGGTCGGATCCAACAGTATCAGCGGGACATTACCAGAAAGTTTTGCCAGCCTTCAATCGCTGACGACATTTTCTGTAGCTGGTAACTATTTGTCTGGCCCTTTACCTGACTTCATAGCCAACTGGACTGAAATCAACGAACTTTATCTCAACGGAAACAATTTCCACGGAAGGATACCTGCCGGAATTTTTAATATATCGTATCTACAAATTTTGGCAATAAGTGACGTCGGAGCAGACTCTAATTTCCAGTTCCCACCATCTACACATGTGACGACAAGTTTTATTCATCGTATTCTGATACTAAGAAACTGCTCAATCACTGGTCAAATTCCTTCTTACATTGGAAATATGTCATCATTATCAAACCTAGACTTGAGCTTCAACAACTTAACGGGTAGAATCCCAGATGCTTTGAAAAACTTAAATTTAAGTTACATATCTTTTTCAAACAATATGCTTTCTGGGGAAATTCCTGATTGGATTCAAAATGCAAACTGGAGTAAGATTGATCTTTCATACAATAATTTTTCAAAACCAACATTTGAAAAATCGTCCAAGTTAGACTGGAATTTGTTTTCCTGCTGCTGCAACTTCTCAACCTGTCTGCCAAATACAACGGACCCAACCACGGAGAAGTATTGTCCAAGGCCTAATTACAATTCATTGTTTATAAATTGTGGTGGTGGGGAACCGATTAAAGTTGATGGAAATGTATATGATCAAGATAATGATACATCACAGTTTTACCTAAGTCCAAAAGGAAACTGGGCTCGAAGTAGTGCTGGAAGCACCGTTGATGCCTTCAATTCCAGTGAATTCTTAAAAAGCATGAGATGTGGGCTTTCCTCTGAAGCAACTTTATACAAGAGTGCTCGCAGTTCTCCGGTCTCTCTAAAATATTACGGGTTCTGTTTACGTAAAGGCAAATACAGGGTAATACTTCATTTTGCTGAAATTGTTTGCGAGGATATGAGGTACAAAAGTACAGATAAACGCATATTTGATGTATATATTCAGGGTGAGAGGAAACTAAAGGATTTCAACATTATAGAGAAGGCAGGAGGACCGAATTTAGTACATGAAGAAAATTTCACAGCGGTTAATGTAAATGATGGTGTATTAGAGATACACTTCTACTCGGCTGGAAAAGGGACTCTTCAGGGACCTCTCATATCTGCTATATCCGCTGAACTGCAAGGAAAAAGTGTAGCTGTGAAGAAACTTTCCTCTCATTCAGAGGAAAGGATAAATCAGTTGAAAAATGAGTTTTATGCTTTGAAATCAATGAGTCAAGAGAACCTTGTTCAGTTACTGGACGTTTACAATGCAAAAGGCCTGCATTTGCTCATCTATGAATATATGCAAAACAAATCCCTTGCACACGCTTTATTTGGTAAATAA

Protein Analysis

789

Amino Acids

87.16

Weight (kDa)

5.93

Isoelectric Point (pI)

32.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 125 - 184 2.3e-07 Leucine rich repeat
LRR_4 PF12799 148 - 189 6.9e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 285 - 348 2.6e-06 Leucine-rich repeat region
Malectin PF11721 545 - 716 9.3e-31 Malectin domain
PK_Tyr_Ser-Thr PF07714 719 - 786 6.9e-07 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 720 - 786 7.2e-07 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1640
AatII GACGTC 1 cut(s) 1197
Acc36I ACCTGC 2 cut(s) 502, 1153
AciI CCGC 5 cut(s) 723, 846, 990, 2066, 2154
AclI AACGTT 1 cut(s) 215
AclWI GGATC 8 cut(s) 468, 654, 666, 679, 733, 756, 969, 982
AcoI YGGCCR 1 cut(s) 432
AcuI CTGAAG 2 cut(s) 1839, 2111
AcyI GRCGYC 1 cut(s) 1194
AfaI GTAC 5 cut(s) 830, 922, 1946, 1954, 2046
AfeI AGCGCT 1 cut(s) 738
AfiI CCNNNNNNNGG 1 cut(s) 1597
AflIII ACRYGT 1 cut(s) 1234
AjnI CCWGG 4 cut(s) 283, 456, 528, 744
Alw21I GWGCWC 1 cut(s) 1843
Alw26I GTCTC 2 cut(s) 882, 1861
AlwI GGATC 8 cut(s) 468, 654, 666, 679, 733, 756, 969, 982
AlwNI CAGNNNCTG 1 cut(s) 2281
Aor51HI AGCGCT 1 cut(s) 738
AoxI GGCC 6 cut(s) 17, 432, 773, 1063, 1616, 2302
ApeKI GCWGC 3 cut(s) 713, 1551, 1554
ArsI GACNNNNNNTTYG 2 cut(s) 880, 912
AspLEI GCGC 2 cut(s) 598, 739
AspS9I GGNCC 9 cut(s) 17, 26, 558, 773, 810, 1064, 1588, 2033, 2132
AsuHPI GGTGA 1 cut(s) 2000
AsuNHI GCTAGC 2 cut(s) 398, 497
AvaII GGWCC 6 cut(s) 26, 558, 810, 1588, 2033, 2132
BaeI ACNNNNGTAYC 2 cut(s) 1936, 1969
BalI TGGCCA 1 cut(s) 434
BamHI GGATCC 2 cut(s) 671, 974
BanII GRGCYC 1 cut(s) 1741
Bbv12I GWGCWC 1 cut(s) 1843
BbvI GCAGC 3 cut(s) 700, 1538, 1541
BccI CCATC 9 cut(s) 7, 35, 140, 293, 374, 715, 1234, 1667, 2075
BciT130I CCWGG 4 cut(s) 285, 458, 530, 746
BciVI GTATCC 1 cut(s) 1134
BclI TGATCA 1 cut(s) 1687
BcoDI GTCTC 2 cut(s) 882, 1861
BfaI CTAG 5 cut(s) 399, 449, 498, 734, 1337
BfmI CTRYAG 1 cut(s) 1041
BfoI RGCGCY 1 cut(s) 740
BfuAI ACCTGC 2 cut(s) 502, 1153
BfuI GTATCC 1 cut(s) 1134
BisI GCNGC 4 cut(s) 714, 847, 1552, 1555
BlsI GCNGC 4 cut(s) 715, 848, 1553, 1556
Bme1390I CCNGG 4 cut(s) 285, 458, 530, 746
Bme18I GGWCC 6 cut(s) 26, 558, 810, 1588, 2033, 2132
BmgT120I GGNCC 9 cut(s) 17, 26, 558, 773, 810, 1064, 1588, 2033, 2132
BmiI GGNNCC 9 cut(s) 18, 487, 559, 673, 811, 976, 1590, 1659, 2133
BmrFI CCNGG 4 cut(s) 285, 458, 530, 746
BmrI ACTGGG 2 cut(s) 780, 1744
BmsI GCATC 4 cut(s) 342, 869, 1366, 1756
BmtI GCTAGC 2 cut(s) 402, 501
BmuI ACTGGG 2 cut(s) 780, 1744
BpmI CTGGAG 3 cut(s) 306, 432, 1486
Bpu10I CCTNAGC 1 cut(s) 790
BpuEI CTTGAG 1 cut(s) 1363
BsaAI YACGTR 1 cut(s) 1886
BsaHI GRCGYC 1 cut(s) 1194
BsaI GGTCTC 1 cut(s) 1861
BsaJI CCNNGG 5 cut(s) 274, 744, 1132, 1596, 1613
BsaWI WCCGGW 1 cut(s) 1852
Bsc4I CCNNNNNNNGG 1 cut(s) 1597
BseBI CCWGG 4 cut(s) 285, 458, 530, 746
BseDI CCNNGG 5 cut(s) 274, 744, 1132, 1596, 1613
BseGI GGATG 2 cut(s) 46, 148
BseLI CCNNNNNNNGG 1 cut(s) 1597
BseMII CTCAG 3 cut(s) 383, 478, 856
BseXI GCAGC 3 cut(s) 700, 1538, 1541
BsgI GTGCAG 1 cut(s) 331
Bsh1285I CGRYCG 1 cut(s) 972
BshFI GGCC 6 cut(s) 19, 434, 775, 1065, 1618, 2304
BsiEI CGRYCG 1 cut(s) 972
BsiHKAI GWGCWC 1 cut(s) 1843
BsiSI CCGG 2 cut(s) 1149, 1853
BslFI GGGAC 5 cut(s) 689, 823, 1006, 2134, 2145
BslI CCNNNNNNNGG 1 cut(s) 1597
BsmAI GTCTC 2 cut(s) 882, 1861
BsmFI GGGAC 5 cut(s) 689, 823, 1006, 2134, 2145
BsnI GGCC 6 cut(s) 19, 434, 775, 1065, 1618, 2304
Bso31I GGTCTC 1 cut(s) 1861
Bsp1286I GDGCHC 2 cut(s) 1741, 1843
Bsp143I GATC 9 cut(s) 460, 552, 646, 671, 725, 748, 974, 1477, 1687
BspACI CCGC 5 cut(s) 723, 846, 990, 2066, 2154
BspANI GGCC 6 cut(s) 19, 434, 775, 1065, 1618, 2304
BspCNI CTCAG 3 cut(s) 384, 477, 855
BspLI GGNNCC 9 cut(s) 18, 487, 559, 673, 811, 976, 1590, 1659, 2133
BspMI ACCTGC 2 cut(s) 502, 1153
BspOI GCTAGC 2 cut(s) 402, 501
BspPI GGATC 8 cut(s) 468, 654, 666, 679, 733, 756, 969, 982
BspTNI GGTCTC 1 cut(s) 1861
BssECI CCNNGG 5 cut(s) 274, 744, 1132, 1596, 1613
BssMI GATC 9 cut(s) 460, 552, 646, 671, 725, 748, 974, 1477, 1687
BssNI GRCGYC 1 cut(s) 1194
BssT1I CCWWGG 2 cut(s) 274, 1613
Bst2UI CCWGG 4 cut(s) 285, 458, 530, 746
Bst4CI ACNGT 4 cut(s) 970, 983, 1710, 1762
Bst6I CTCTTC 1 cut(s) 2130
BstACI GRCGYC 1 cut(s) 1194
BstBAI YACGTR 1 cut(s) 1886
BstC8I GCNNGC 6 cut(s) 102, 400, 499, 1015, 1843, 2306
BstDEI CTNAG 7 cut(s) 295, 392, 464, 790, 842, 1271, 1718
BstDSI CCRYGG 2 cut(s) 1132, 1596
BstF5I GGATG 2 cut(s) 46, 148
BstH2I RGCGCY 1 cut(s) 740
BstHHI GCGC 2 cut(s) 598, 739
BstKTI GATC 9 cut(s) 463, 555, 649, 674, 728, 751, 977, 1480, 1690
BstMAI GTCTC 2 cut(s) 882, 1861
BstMBI GATC 9 cut(s) 460, 552, 646, 671, 725, 748, 974, 1477, 1687
BstMCI CGRYCG 1 cut(s) 972
BstMWI GCNNNNNNNGC 6 cut(s) 106, 309, 318, 345, 736, 2153
BstNI CCWGG 4 cut(s) 285, 458, 530, 746
BstNSI RCATGY 1 cut(s) 1238
BstSCI CCNGG 4 cut(s) 283, 456, 528, 744
BstSFI CTRYAG 1 cut(s) 1041
BstSNI TACGTA 1 cut(s) 1886
BstV1I GCAGC 3 cut(s) 700, 1538, 1541
BstX2I RGATCY 5 cut(s) 460, 646, 671, 748, 974
BstYI RGATCY 5 cut(s) 460, 646, 671, 748, 974
BsuI GTATCC 1 cut(s) 1134
BsuRI GGCC 6 cut(s) 19, 434, 775, 1065, 1618, 2304
BtgI CCRYGG 2 cut(s) 1132, 1596
BtsCI GGATG 2 cut(s) 46, 148
BtsIMutI CAGTG 3 cut(s) 890, 1287, 1786
BveI ACCTGC 2 cut(s) 502, 1153
Cac8I GCNNGC 6 cut(s) 102, 400, 499, 1015, 1843, 2306
CaiI CAGNNNCTG 1 cut(s) 2281
CfoI GCGC 2 cut(s) 598, 739
Cfr13I GGNCC 9 cut(s) 17, 26, 558, 773, 810, 1064, 1588, 2033, 2132
CpoI CGGWCCG 1 cut(s) 26
CseI GACGC 1 cut(s) 943
Csp6I GTAC 5 cut(s) 829, 921, 1945, 1953, 2045
CspI CGGWCCG 1 cut(s) 26
CviAII CATG 5 cut(s) 105, 622, 1235, 1798, 2048
CviQI GTAC 5 cut(s) 829, 921, 1945, 1953, 2045
DdeI CTNAG 7 cut(s) 295, 392, 464, 790, 842, 1271, 1718
DpnI GATC 9 cut(s) 462, 554, 648, 673, 727, 750, 976, 1479, 1689
DpnII GATC 9 cut(s) 460, 552, 646, 671, 725, 748, 974, 1477, 1687
EaeI YGGCCR 1 cut(s) 432
Eam1104I CTCTTC 1 cut(s) 2130
EarI CTCTTC 1 cut(s) 2130
Eco105I TACGTA 1 cut(s) 1886
Eco130I CCWWGG 2 cut(s) 274, 1613
Eco147I AGGCCT 2 cut(s) 1618, 2304
Eco24I GRGCYC 1 cut(s) 1741
Eco31I GGTCTC 1 cut(s) 1861
Eco32I GATATC 1 cut(s) 281
Eco47I GGWCC 6 cut(s) 26, 558, 810, 1588, 2033, 2132
Eco47III AGCGCT 1 cut(s) 738
Eco57I CTGAAG 2 cut(s) 1839, 2111
EcoO109I RGGNCCY 1 cut(s) 2132
EcoRI GAATTC 2 cut(s) 188, 1784
EcoRII CCWGG 4 cut(s) 283, 456, 528, 744
EcoRV GATATC 1 cut(s) 281
EcoT14I CCWWGG 2 cut(s) 274, 1613
EcoT38I GRGCYC 1 cut(s) 1741
ErhI CCWWGG 2 cut(s) 274, 1613
FaeI CATG 5 cut(s) 108, 625, 1238, 1801, 2051
FalI AAGNNNNNCTT 4 cut(s) 2109, 2141, 2253, 2285
FaqI GGGAC 5 cut(s) 689, 823, 1006, 2134, 2145
FatI CATG 5 cut(s) 104, 621, 1234, 1797, 2047
FauI CCCGC 1 cut(s) 983
FbaI TGATCA 1 cut(s) 1687
Fnu4HI GCNGC 4 cut(s) 714, 847, 1552, 1555
FokI GGATG 2 cut(s) 53, 155
FriOI GRGCYC 1 cut(s) 1741
Fsp4HI GCNGC 4 cut(s) 714, 847, 1552, 1555
FspBI CTAG 5 cut(s) 399, 449, 498, 734, 1337
GlaI GCGC 2 cut(s) 597, 738
GluI GCNGC 4 cut(s) 714, 847, 1552, 1555
GsuI CTGGAG 3 cut(s) 306, 432, 1486
HaeII RGCGCY 1 cut(s) 740
HaeIII GGCC 6 cut(s) 19, 434, 775, 1065, 1618, 2304
HapII CCGG 2 cut(s) 1149, 1853
HgaI GACGC 1 cut(s) 943
HhaI GCGC 2 cut(s) 598, 739
Hin1I GRCGYC 1 cut(s) 1194
Hin1II CATG 5 cut(s) 108, 625, 1238, 1801, 2051
Hin6I GCGC 2 cut(s) 596, 737
HinP1I GCGC 2 cut(s) 596, 737
HincII GTYRAC 1 cut(s) 619
HindII GTYRAC 1 cut(s) 619
HindIII AAGCTT 1 cut(s) 68
HinfI GANTC 8 cut(s) 472, 625, 912, 1205, 1368, 1450, 2122, 2257
HpaII CCGG 2 cut(s) 1149, 1853
HphI GGTGA 1 cut(s) 2000
Hpy166II GTNNAC 3 cut(s) 619, 1883, 2290
Hpy188I TCNGA 7 cut(s) 187, 380, 974, 1199, 1266, 1819, 2206
Hpy188III TCNNGA 9 cut(s) 10, 449, 566, 629, 644, 886, 1442, 1691, 2261
Hpy8I GTNNAC 3 cut(s) 619, 1883, 2290
Hpy99I CGWCG 1 cut(s) 1199
HpyAV CCTTC 6 cut(s) 607, 1028, 1131, 1311, 1780, 2017
HpyCH4III ACNGT 4 cut(s) 970, 983, 1710, 1762
HpyCH4IV ACGT 4 cut(s) 215, 1194, 1885, 2286
HpyF10VI GCNNNNNNNGC 6 cut(s) 106, 309, 318, 345, 736, 2153
HpyF3I CTNAG 7 cut(s) 295, 392, 464, 790, 842, 1271, 1718
HpySE526I ACGT 4 cut(s) 215, 1194, 1885, 2286
Hsp92I GRCGYC 1 cut(s) 1194
Hsp92II CATG 5 cut(s) 108, 625, 1238, 1801, 2051
HspAI GCGC 2 cut(s) 596, 737
Ksp22I TGATCA 1 cut(s) 1687
Kzo9I GATC 9 cut(s) 460, 552, 646, 671, 725, 748, 974, 1477, 1687
LmnI GCTCC 1 cut(s) 1199
Lsp1109I GCAGC 3 cut(s) 700, 1538, 1541
LweI GCATC 4 cut(s) 342, 869, 1366, 1756
MaeI CTAG 5 cut(s) 399, 449, 498, 734, 1337
MaeII ACGT 4 cut(s) 215, 1194, 1885, 2286
MaeIII GTNAC 8 cut(s) 130, 341, 682, 1049, 1190, 1237, 1400, 2277
MalI GATC 9 cut(s) 462, 554, 648, 673, 727, 750, 976, 1479, 1689
MboI GATC 9 cut(s) 460, 552, 646, 671, 725, 748, 974, 1477, 1687
MboII GAAGA 4 cut(s) 239, 2063, 2117, 2197
MfeI CAATTG 3 cut(s) 476, 548, 764
MflI RGATCY 5 cut(s) 460, 646, 671, 748, 974
MhlI GDGCHC 2 cut(s) 1741, 1843
MlsI TGGCCA 1 cut(s) 434
MluNI TGGCCA 1 cut(s) 434
MlyI GAGTC 3 cut(s) 1199, 2116, 2266
MmeI TCCRAC 3 cut(s) 952, 1002, 1177
MnlI CCTC 9 cut(s) 46, 1825, 1927, 1935, 1986, 2024, 2145, 2200, 2206
Mox20I TGGCCA 1 cut(s) 434
MscI TGGCCA 1 cut(s) 434
MseI TTAA 9 cut(s) 243, 269, 1158, 1358, 1391, 1397, 1665, 1790, 2070
MslI CAYNNNNRTG 2 cut(s) 666, 906
Msp20I TGGCCA 1 cut(s) 434
MspA1I CMGCKG 5 cut(s) 723, 846, 990, 2066, 2156
MspI CCGG 2 cut(s) 1149, 1853
MspR9I CCNGG 4 cut(s) 285, 458, 530, 746
MunI CAATTG 3 cut(s) 476, 548, 764
MvaI CCWGG 4 cut(s) 285, 458, 530, 746
MwoI GCNNNNNNNGC 6 cut(s) 106, 309, 318, 345, 736, 2153
NdeII GATC 9 cut(s) 460, 552, 646, 671, 725, 748, 974, 1477, 1687
NheI GCTAGC 2 cut(s) 398, 497
NlaIII CATG 5 cut(s) 108, 625, 1238, 1801, 2051
NlaIV GGNNCC 9 cut(s) 18, 487, 559, 673, 811, 976, 1590, 1659, 2133
NmeAIII GCCGAG 1 cut(s) 2087
NmuCI GTSAC 3 cut(s) 682, 1190, 1237
NspI RCATGY 1 cut(s) 1238
PceI AGGCCT 2 cut(s) 1618, 2304
PciI ACATGT 1 cut(s) 1234
PfeI GAWTC 5 cut(s) 472, 625, 912, 1368, 1450
PfoI TCCNGGA 1 cut(s) 283
PkrI GCNGC 4 cut(s) 715, 848, 1553, 1556
PleI GAGTC 3 cut(s) 1199, 2116, 2265
PpsI GAGTC 3 cut(s) 1199, 2116, 2265
Ppu21I YACGTR 1 cut(s) 1886
PpuMI RGGWCCY 1 cut(s) 2132
PscI ACATGT 1 cut(s) 1234
PsiI TTATAA 1 cut(s) 1640
Psp1406I AACGTT 1 cut(s) 215
Psp5II RGGWCCY 1 cut(s) 2132
Psp6I CCWGG 4 cut(s) 283, 456, 528, 744
PspGI CCWGG 4 cut(s) 283, 456, 528, 744
PspN4I GGNNCC 9 cut(s) 18, 487, 559, 673, 811, 976, 1590, 1659, 2133
PspPI GGNCC 9 cut(s) 17, 26, 558, 773, 810, 1064, 1588, 2033, 2132
PspPPI RGGWCCY 1 cut(s) 2132
PstNI CAGNNNCTG 1 cut(s) 2281
PsuI RGATCY 5 cut(s) 460, 646, 671, 748, 974
RsaI GTAC 5 cut(s) 830, 922, 1946, 1954, 2046
RsaNI GTAC 5 cut(s) 829, 921, 1945, 1953, 2045
RseI CAYNNNNRTG 2 cut(s) 666, 906
Rsr2I CGGWCCG 1 cut(s) 26
RsrII CGGWCCG 1 cut(s) 26
SaqAI TTAA 9 cut(s) 243, 269, 1158, 1358, 1391, 1397, 1665, 1790, 2070
SatI GCNGC 4 cut(s) 714, 847, 1552, 1555
Sau3AI GATC 9 cut(s) 460, 552, 646, 671, 725, 748, 974, 1477, 1687
Sau96I GGNCC 9 cut(s) 17, 26, 558, 773, 810, 1064, 1588, 2033, 2132
SchI GAGTC 3 cut(s) 1199, 2116, 2266
ScrFI CCNGG 4 cut(s) 285, 458, 530, 746
SduI GDGCHC 2 cut(s) 1741, 1843
SfaNI GCATC 4 cut(s) 342, 869, 1366, 1756
SfcI CTRYAG 1 cut(s) 1041
SinI GGWCC 6 cut(s) 26, 558, 810, 1588, 2033, 2132
SmiMI CAYNNNNRTG 2 cut(s) 666, 906
SmlI CTYRAG 2 cut(s) 8, 1342
SmoI CTYRAG 2 cut(s) 8, 1342
SnaBI TACGTA 1 cut(s) 1886
SseBI AGGCCT 2 cut(s) 1618, 2304
SsiI CCGC 5 cut(s) 723, 846, 990, 2066, 2154
SspI AATATT 1 cut(s) 1868
SspMI CTAG 5 cut(s) 399, 449, 498, 734, 1337
StuI AGGCCT 2 cut(s) 1618, 2304
StyD4I CCNGG 4 cut(s) 283, 456, 528, 744
StyI CCWWGG 2 cut(s) 274, 1613
TaaI ACNGT 4 cut(s) 970, 983, 1710, 1762
TaiI ACGT 4 cut(s) 218, 1197, 1888, 2289
TaqI TCGA 3 cut(s) 127, 199, 1741
TaqII GACCGA 2 cut(s) 14, 2050
TatI WGTACW 2 cut(s) 1952, 2044
TauI GCSGC 1 cut(s) 849
TfiI GAWTC 5 cut(s) 472, 625, 912, 1368, 1450
Tru1I TTAA 9 cut(s) 243, 269, 1158, 1358, 1391, 1397, 1665, 1790, 2070
Tru9I TTAA 9 cut(s) 243, 269, 1158, 1358, 1391, 1397, 1665, 1790, 2070
TscAI CASTG 3 cut(s) 897, 1294, 1786
TseFI GTSAC 3 cut(s) 682, 1190, 1237
TseI GCWGC 3 cut(s) 713, 1551, 1554
Tsp45I GTSAC 3 cut(s) 682, 1190, 1237
TspGWI ACGGA 6 cut(s) 18, 53, 1134, 1149, 1601, 1613
TspRI CASTG 3 cut(s) 897, 1294, 1786
VpaK11BI GGWCC 6 cut(s) 26, 558, 810, 1588, 2033, 2132
XbaI TCTAGA 1 cut(s) 448
XceI RCATGY 1 cut(s) 1238
XcmI CCANNNNNNNNNTGG 1 cut(s) 1731
XspI CTAG 5 cut(s) 399, 449, 498, 734, 1337
ZraI GACGTC 1 cut(s) 1195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.