Rw5G000940

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
726443 .. 737122
10680 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G000940.1

Sequence Viewer

Length: 3111 bp
ATGAGCAAGCCTTCCCATAGAGTACTGCTTACGAAGCTTGTTTTATCCCTCAACTTTCTTTTTTGGCAGCTTGGGTCTGAACTCAAATTCCAGGCTAGAGCTTATGTAGTACTCCCAGCTGATGAAGTTTATACTCTCACAACCGTGATGAACAAGTTGGAGGTAAAGCAAGCGTCAGATATAAATTATACATCTTGCCAGAATATTGTCTACGGTATCACAATCGGTTGTAATTGTGACTACAAGAACAAAACGGAGTGCCATATCACAAAAATTTCCATGAACGACATAGCTTTAACTTCAGTTATACCAGAAGAAGTTGGTGACCTTGGGTACCTGTCATTCCTCGACCTATCCGGCGGTAAACTTTATGGCTCCATACCAGCTGCATTAGGGTACTTGCATCGTCTCCAAACCTTGGATCTATCAAGCAATCAACTGACCGGCTCAATACCAGACTTGGGGAGATTGCAAAACCTGCAGTCGCTAAGTCTACACCACAACTTGCTGGAAGGCACTATACCACCAACCTTGGGTTCACTGGTGAAGCTTGATAAACTGGATCTCCAGTCTAATAGGTTATTAGGCACAATTCCTGATGAGTTGGGAAATCTCGTCAATCTGACTACATTGGATATTTCTGAGAACATGCTCACTGGTCCGCTTCCCAAAACACTTGGAAATTTGAGTTCCCTCAGCTCCTTCTGGGCCGAAGCCAATTACTTGAATGATGAATTTCCGTACACTTATGGGAAGCTTACAAGTCTAAAATATTTTTCAATATCCGGGAATGATATCTCTGGAACATTACCTGTTGACATCATAAAGAACTGGACTAATATCAAATATCTGACGCTCATGGGAAACAATTTTAAAGGAAATTTGACTGAAGAAGTATTCAATCTGCCATACCTTCAGCATCTGACGGTAAGTGACCTCGAAGACGCTACTTTCGAGTTACCATCAAACATTACGAATACCAACTATGTTTATCTGGTACTGAGGAACTGCTCAATCAATGGTTCGATCCCCAAATACATTGGTGATAAAATGAAATCTCTAACATACCTAGACTTGAGTTTCAACAGCTTAACGGGTGGACTCCCAGAGTATATGAAATCGGATTTATTTTACGTGTCTTTTTCCACAAATATGCTTAATGGGACGATACCTGGTTGGATCCTTCAGGCAGTCCAAACTAGGATAGATCTATCATTCAATAATTTGTCAGCACTGGACTCTGGAGTACCAACAAACCCATATCTGAACTTGTTCGCTTGCTGCCGCAACTCCTCAGCCACTGAACCAGAAATGAGGGATCCATTAGAAATGATGAATACATACTGTCCGGGAAAGAAAAAAAAATACCATTCTTTGTTTATTAACTGTGGTGGTGGAGAAGCAACTGTTAATGGAATTACTTATGAGCAAGATAACGCCACAGCACCCTTCTTCACAAGTCCAAATAAAAACTGGGCGTATAGCTCTTCGTTAGAAGGATTTGGCGCCAATTCTAGTGATTACACGAAGAACATGACATGTGGAATTTCTGTTGCTGACGCACTTTTGTATGATAGAGCTCGTCGTTCCCCTGTATCTCTCAAGTACTATGCTTTCTGTCTACGTGAAGGCAAATATAATGTGACGCTCAAGTTTGCTGAAATTTTATACACCGAAGATACAGACTATACCAGTTTGAGGAAGCGTGCATTCGATATTTATATTCAGGATGAGATTAAAGTGCTACATGATTTCCACATTAGAGAGAACGCAGGAGGTCCAGATAAACCAATTACCAAAAGTTTTACAGCTGTGGTAAATAAAAATAATACTCTATTAACCATCCACCTGTACTGGGATGGCAAGGGGTCTATTGAATACAGACCTGCGTTTAATGGACCTCTAATATCAGCTATTTCTGTTACTCCTGAATTCAAAATTCATGATGGGAAACTACGTCCCTTACATATTGCACTGATCGGGATAGGTTCAACCATTATTGCTGTGCTGCTTTTATTGGCTTTTGCCTGGATGGGCTGGTTCAGAAGCAGAAACTCACCCAAAATAAAAGTAGGTGAAGAAAAAAAAGGGGAAGGGACTCAAGACAAGCATGTCACCCTCAAAGAATTAATAGATGCTACTGGAAAGTTTAGCGACAAAAAGATAATTGGCAGTGGCAGTCTTGGGAAAGTTTATGAGGCACAACTACTAGGTCTTATTAAAACTACTGTAGCTGTGAAGAGACTTTCCTCTCATTTTAAAGAAAATATCCAAAAATTGAAAAAGGAAATCAAATGGTTATATGAATTGGAGCATGAAAATCTCATTAAATTGTTCGATTATCATATTGAGAAAGACCTCCAACTTCTTGTTTATGAATACATGGAAAACAGATCCCTGGAAGATGCATTGACTGTCGACTCAAATACCAGATCATTGAAATTTACTTGGGATACTAGATCCAAGATTTGCTTGGGAATAGCAAGGGGTTTGGAGTATCTACACAATCATCGTAAACTAAATATTGCTCATATGAACATTAAAGCTGTTAATATTCTTCTTGATGGAGATCTTGAGCCAAAGATATCAGATTTTGGATTGGCACATCTTTATGTTGAGGAGGATCAATTTAAGCTCATCAAAAGAGAAGTTTCACAAGGATATACGGCACCAGAGTATTTTCAAGGAAATTTGACGATTAAAGCTGATGTTTACAGCTTTGGGGTGATCCTACTTGAAATTGTTTCTTGGAAAAAAAATGTGATCAAATCACACAATGGAACTGAGGTTCTTGTGGACACGGCTAATGAAAAACATGAACAAGGAAATCTCGAGGACATGATTGATAAGAATTTGGAAACTTGCGATACACAACAAGCCCTGACAGTCTTGAAATTAGCAGTGAAGTGCACCAGTATAGCCCCTAGTGTGAGGCCTTCAATGTCTGACGTTGTGAGTGTTCTGCTAAATAAAAAGACGATTGGTGAGCTTTTTAGATCTGCTGCCCCTAATGTTGGGAAAAAGATCAAGGGCAGTGGGGGCGCCACTTCTATGGACCTTACCTCTATACCATCAACTTCATCTCCTTCTACCAACACCAAAGATGAATAG

Protein Analysis

1036

Amino Acids

115.63

Weight (kDa)

6.55

Isoelectric Point (pI)

33.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 101 - 190 4.6e-07 Leucine-rich repeat region
LRR_4 PF12799 136 - 170 2.6e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 136 - 194 1.4e-06 Leucine rich repeat
LRR_14 PF23598 178 - 261 7.1e-07 Leucine-rich repeat region
Malectin PF11721 458 - 639 1.1e-27 Malectin domain
Pkinase PF00069 718 - 985 1e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 720 - 987 2.9e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2111
Acc36I ACCTGC 2 cut(s) 486, 1894
Acc65I GGTACC 1 cut(s) 333
AccB1I GGYRCC 4 cut(s) 333, 1505, 2668, 3041
AccB7I CCANNNNNTGG 1 cut(s) 418
AccI GTMKAC 4 cut(s) 210, 493, 1621, 2418
AciI CCGC 3 cut(s) 360, 662, 1285
AcuI CTGAAG 4 cut(s) 285, 899, 909, 1169
AcyI GRCGYC 2 cut(s) 1506, 3042
AfaI GTAC 9 cut(s) 24, 111, 335, 398, 743, 999, 1248, 1607, 1853
AfiI CCNNNNNNNGG 6 cut(s) 418, 461, 533, 1698, 1855, 3014
AflIII ACRYGT 2 cut(s) 1134, 1538
AjnI CCWGG 4 cut(s) 90, 1171, 2027, 2397
AjuI GAANNNNNNNTTGG 2 cut(s) 520, 552
AleI CACNNNNGTG 1 cut(s) 143
AloI GAACNNNNNNTCC 4 cut(s) 72, 104, 2772, 2804
Alw21I GWGCWC 2 cut(s) 1582, 2912
Alw26I GTCTC 2 cut(s) 413, 2236
Alw44I GTGCAC 1 cut(s) 2908
AlwNI CAGNNNCTG 2 cut(s) 922, 1301
Ama87I CYCGRG 1 cut(s) 2831
AoxI GGCC 2 cut(s) 708, 2933
ApaLI GTGCAC 1 cut(s) 2908
ApeKI GCWGC 5 cut(s) 67, 386, 1281, 2008, 3002
ArsI GACNNNNNNTTYG 2 cut(s) 935, 967
AseI ATTAAT 1 cut(s) 2129
Asp700I GAANNNNTTC 1 cut(s) 1271
Asp718I GGTACC 1 cut(s) 333
AspLEI GCGC 2 cut(s) 1508, 3044
AspS9I GGNCC 5 cut(s) 659, 708, 1778, 1898, 3055
AsuC2I CCSGG 2 cut(s) 787, 1350
AsuHPI GGTGA 8 cut(s) 335, 556, 1055, 2049, 2087, 2107, 2737, 2996
AvaI CYCGRG 1 cut(s) 2831
AvaII GGWCC 4 cut(s) 659, 1778, 1898, 3055
BaeGI GKGCMC 1 cut(s) 2912
BamHI GGATCC 2 cut(s) 1179, 1318
BanI GGYRCC 4 cut(s) 333, 1505, 2668, 3041
BanII GRGCYC 1 cut(s) 1582
BarI GAAGNNNNNNTAC 2 cut(s) 504, 536
BbsI GAAGAC 1 cut(s) 948
Bbv12I GWGCWC 2 cut(s) 1582, 2912
BbvCI CCTCAGC 2 cut(s) 695, 1294
BbvI GCAGC 5 cut(s) 79, 373, 1268, 1995, 2989
BccI CCATC 7 cut(s) 970, 1850, 1853, 1940, 2026, 2558, 3079
BceAI ACGGC 2 cut(s) 2682, 2817
BciT130I CCWGG 4 cut(s) 92, 1173, 2029, 2399
BciVI GTATCC 1 cut(s) 2446
BclI TGATCA 1 cut(s) 2763
BcnI CCSGG 2 cut(s) 787, 1350
BcoDI GTCTC 2 cut(s) 413, 2236
BfaI CTAG 7 cut(s) 96, 1070, 1200, 1515, 2210, 2457, 2925
BfmI CTRYAG 2 cut(s) 479, 2229
BfoI RGCGCY 2 cut(s) 1509, 3045
BfuAI ACCTGC 2 cut(s) 486, 1894
BfuI GTATCC 1 cut(s) 2446
BglII AGATCT 3 cut(s) 1207, 2569, 2996
BisI GCNGC 6 cut(s) 68, 387, 1282, 1285, 2009, 3003
BlsI GCNGC 6 cut(s) 69, 388, 1283, 1286, 2010, 3004
BmcAI AGTACT 3 cut(s) 24, 111, 1607
Bme1390I CCNGG 6 cut(s) 92, 787, 1173, 1350, 2029, 2399
Bme18I GGWCC 4 cut(s) 659, 1778, 1898, 3055
BmeT110I CYCGRG 1 cut(s) 2831
BmgT120I GGNCC 5 cut(s) 659, 708, 1778, 1898, 3055
BmiI GGNNCC 7 cut(s) 335, 376, 1181, 1320, 1507, 2670, 3043
BmrFI CCNGG 6 cut(s) 92, 787, 1173, 1350, 2029, 2399
BmrI ACTGGG 2 cut(s) 1483, 1864
BmsI GCATC 4 cut(s) 412, 928, 2125, 2395
BmuI ACTGGG 2 cut(s) 1483, 1864
BpiI GAAGAC 1 cut(s) 948
BpmI CTGGAG 2 cut(s) 551, 1263
Bpu10I CCTNAGC 2 cut(s) 695, 1294
BpuEI CTTGAG 5 cut(s) 1096, 1586, 1634, 2085, 2594
BpuMI CCSGG 2 cut(s) 787, 1350
BsaAI YACGTR 2 cut(s) 1135, 1625
BsaBI GATNNNNATC 1 cut(s) 2568
BsaHI GRCGYC 2 cut(s) 1506, 3042
BsaJI CCNNGG 4 cut(s) 328, 417, 531, 2397
BsaXI ACNNNNNCTCC 4 cut(s) 549, 579, 3067, 3097
Bsc4I CCNNNNNNNGG 6 cut(s) 418, 461, 533, 1698, 1855, 3014
Bse118I RCCGGY 1 cut(s) 443
Bse8I GATNNNNATC 1 cut(s) 2568
BseBI CCWGG 4 cut(s) 92, 1173, 2029, 2399
BseDI CCNNGG 4 cut(s) 328, 417, 531, 2397
BseGI GGATG 4 cut(s) 1735, 1842, 1864, 2037
BseJI GATNNNNATC 1 cut(s) 2568
BseLI CCNNNNNNNGG 6 cut(s) 418, 461, 533, 1698, 1855, 3014
BseMII CTCAG 5 cut(s) 633, 709, 992, 1308, 2775
BseRI GAGGAG 2 cut(s) 1282, 2633
BseSI GKGCMC 1 cut(s) 2912
BseXI GCAGC 5 cut(s) 79, 373, 1268, 1995, 2989
BseYI CCCAGC 1 cut(s) 115
BshFI GGCC 2 cut(s) 710, 2935
BshNI GGYRCC 4 cut(s) 333, 1505, 2668, 3041
BsiHKAI GWGCWC 2 cut(s) 1582, 2912
BsiHKCI CYCGRG 1 cut(s) 2831
BsiSI CCGG 4 cut(s) 357, 444, 786, 1349
BslFI GGGAC 3 cut(s) 1177, 1944, 2110
BslI CCNNNNNNNGG 6 cut(s) 418, 461, 533, 1698, 1855, 3014
BsmAI GTCTC 2 cut(s) 413, 2236
BsmBI CGTCTC 1 cut(s) 413
BsmFI GGGAC 3 cut(s) 1177, 1944, 2110
BsmI GAATGC 1 cut(s) 1709
BsnI GGCC 2 cut(s) 710, 2935
BsoBI CYCGRG 1 cut(s) 2831
Bsp1286I GDGCHC 2 cut(s) 1582, 2912
BspACI CCGC 3 cut(s) 360, 662, 1285
BspANI GGCC 2 cut(s) 710, 2935
BspCNI CTCAG 5 cut(s) 634, 708, 993, 1307, 2776
BspHI TCATGA 1 cut(s) 1942
BspLI GGNNCC 7 cut(s) 335, 376, 1181, 1320, 1507, 2670, 3043
BspMAI CTGCAG 1 cut(s) 483
BspMI ACCTGC 2 cut(s) 486, 1894
BspQI GCTCTTC 1 cut(s) 1492
BspT107I GGYRCC 4 cut(s) 333, 1505, 2668, 3041
BsrFI RCCGGY 1 cut(s) 443
BssAI RCCGGY 1 cut(s) 443
BssECI CCNNGG 4 cut(s) 328, 417, 531, 2397
BssNI GRCGYC 2 cut(s) 1506, 3042
BssT1I CCWWGG 3 cut(s) 328, 417, 531
Bst2UI CCWGG 4 cut(s) 92, 1173, 2029, 2399
Bst4CI ACNGT 9 cut(s) 145, 215, 928, 1346, 1388, 1408, 2230, 2416, 2887
Bst6I CTCTTC 2 cut(s) 1492, 2234
BstACI GRCGYC 2 cut(s) 1506, 3042
BstAPI GCANNNNNTGC 1 cut(s) 478
BstBAI YACGTR 2 cut(s) 1135, 1625
BstC8I GCNNGC 4 cut(s) 8, 171, 1279, 1707
BstDEI CTNAG 6 cut(s) 488, 642, 695, 1001, 1294, 2784
BstEII GGTNACC 1 cut(s) 323
BstF5I GGATG 4 cut(s) 1735, 1842, 1864, 2037
BstH2I RGCGCY 2 cut(s) 1509, 3045
BstHHI GCGC 2 cut(s) 1508, 3044
BstMAI GTCTC 2 cut(s) 413, 2236
BstMWI GCNNNNNNNGC 3 cut(s) 34, 478, 3039
BstNI CCWGG 4 cut(s) 92, 1173, 2029, 2399
BstNSI RCATGY 3 cut(s) 652, 1542, 2114
BstPI GGTNACC 1 cut(s) 323
BstSCI CCNGG 6 cut(s) 90, 785, 1171, 1348, 2027, 2397
BstSFI CTRYAG 2 cut(s) 479, 2229
BstSLI GKGCMC 1 cut(s) 2912
BstV1I GCAGC 5 cut(s) 79, 373, 1268, 1995, 2989
BstV2I GAAGAC 1 cut(s) 948
BstX2I RGATCY 9 cut(s) 421, 562, 1179, 1207, 1318, 2393, 2459, 2569, 2996
BstXI CCANNNNNNTGG 1 cut(s) 3052
BstYI RGATCY 9 cut(s) 421, 562, 1179, 1207, 1318, 2393, 2459, 2569, 2996
BsuI GTATCC 1 cut(s) 2446
BsuRI GGCC 2 cut(s) 710, 2935
BtsCI GGATG 4 cut(s) 1735, 1842, 1864, 2037
BtsI GCAGTG 3 cut(s) 2179, 2907, 3040
BtsIMutI CAGTG 8 cut(s) 539, 654, 1232, 1299, 1973, 2179, 2907, 3040
BveI ACCTGC 2 cut(s) 486, 1894
Cac8I GCNNGC 4 cut(s) 8, 171, 1279, 1707
CaiI CAGNNNCTG 2 cut(s) 922, 1301
CciI TCATGA 1 cut(s) 1942
CfoI GCGC 2 cut(s) 1508, 3044
Cfr10I RCCGGY 1 cut(s) 443
Cfr13I GGNCC 5 cut(s) 659, 708, 1778, 1898, 3055
CseI GACGC 5 cut(s) 162, 862, 953, 1568, 1654
CsiI ACCWGGT 1 cut(s) 1171
Csp6I GTAC 9 cut(s) 23, 110, 334, 397, 742, 998, 1247, 1606, 1852
CspCI CAANNNNNGTGG 4 cut(s) 513, 548, 3016, 3051
CviQI GTAC 9 cut(s) 23, 110, 334, 397, 742, 998, 1247, 1606, 1852
DdeI CTNAG 6 cut(s) 488, 642, 695, 1001, 1294, 2784
DinI GGCGCC 2 cut(s) 1507, 3043
DraI TTTAAA 2 cut(s) 874, 2260
DrdI GACNNNNNNGTC 1 cut(s) 2111
DseDI GACNNNNNNGTC 1 cut(s) 2111
Eam1104I CTCTTC 2 cut(s) 1492, 2234
EarI CTCTTC 2 cut(s) 1492, 2234
Ecl136II GAGCTC 1 cut(s) 1580
Eco130I CCWWGG 3 cut(s) 328, 417, 531
Eco147I AGGCCT 1 cut(s) 2935
Eco24I GRGCYC 1 cut(s) 1582
Eco32I GATATC 2 cut(s) 796, 2586
Eco47I GGWCC 4 cut(s) 659, 1778, 1898, 3055
Eco53kI GAGCTC 1 cut(s) 1580
Eco57I CTGAAG 4 cut(s) 285, 899, 909, 1169
Eco88I CYCGRG 1 cut(s) 2831
Eco91I GGTNACC 1 cut(s) 323
EcoICRI GAGCTC 1 cut(s) 1580
EcoO65I GGTNACC 1 cut(s) 323
EcoRI GAATTC 1 cut(s) 1931
EcoRII CCWGG 4 cut(s) 90, 1171, 2027, 2397
EcoRV GATATC 2 cut(s) 796, 2586
EcoT14I CCWWGG 3 cut(s) 328, 417, 531
EcoT22I ATGCAT 1 cut(s) 2410
EcoT38I GRGCYC 1 cut(s) 1582
EgeI GGCGCC 2 cut(s) 1507, 3043
EheI GGCGCC 2 cut(s) 1507, 3043
ErhI CCWWGG 3 cut(s) 328, 417, 531
Esp3I CGTCTC 1 cut(s) 413
FalI AAGNNNNNCTT 2 cut(s) 2456, 2488
FaqI GGGAC 3 cut(s) 1177, 1944, 2110
FauNDI CATATG 1 cut(s) 2532
FbaI TGATCA 1 cut(s) 2763
FblI GTMKAC 4 cut(s) 210, 493, 1621, 2418
Fnu4HI GCNGC 6 cut(s) 68, 387, 1282, 1285, 2009, 3003
FokI GGATG 4 cut(s) 1742, 1829, 1871, 2044
FriOI GRGCYC 1 cut(s) 1582
Fsp4HI GCNGC 6 cut(s) 68, 387, 1282, 1285, 2009, 3003
FspBI CTAG 7 cut(s) 96, 1070, 1200, 1515, 2210, 2457, 2925
GlaI GCGC 2 cut(s) 1507, 3043
GluI GCNGC 6 cut(s) 68, 387, 1282, 1285, 2009, 3003
GsaI CCCAGC 1 cut(s) 119
GsuI CTGGAG 2 cut(s) 551, 1263
HaeII RGCGCY 2 cut(s) 1509, 3045
HaeIII GGCC 2 cut(s) 710, 2935
HapII CCGG 4 cut(s) 357, 444, 786, 1349
HgaI GACGC 5 cut(s) 162, 862, 953, 1568, 1654
HhaI GCGC 2 cut(s) 1508, 3044
Hin1I GRCGYC 2 cut(s) 1506, 3042
Hin6I GCGC 2 cut(s) 1506, 3042
HinP1I GCGC 2 cut(s) 1506, 3042
HincII GTYRAC 2 cut(s) 817, 2419
HindII GTYRAC 2 cut(s) 817, 2419
HindIII AAGCTT 3 cut(s) 35, 548, 755
HinfI GANTC 4 cut(s) 1101, 1238, 2098, 2420
HpaII CCGG 4 cut(s) 357, 444, 786, 1349
HphI GGTGA 8 cut(s) 335, 556, 1055, 2049, 2087, 2107, 2737, 2996
Hpy99I CGWCG 1 cut(s) 1587
HpyCH4III ACNGT 9 cut(s) 145, 215, 928, 1346, 1388, 1408, 2230, 2416, 2887
HpyCH4IV ACGT 4 cut(s) 1134, 1624, 1957, 2949
HpyCH4V TGCA 8 cut(s) 389, 403, 472, 481, 1709, 1973, 2408, 2910
HpyF10VI GCNNNNNNNGC 3 cut(s) 34, 478, 3039
HpyF3I CTNAG 6 cut(s) 488, 642, 695, 1001, 1294, 2784
HpySE526I ACGT 4 cut(s) 1134, 1624, 1957, 2949
Hsp92I GRCGYC 2 cut(s) 1506, 3042
HspAI GCGC 2 cut(s) 1506, 3042
KasI GGCGCC 2 cut(s) 1505, 3041
KpnI GGTACC 1 cut(s) 337
Ksp22I TGATCA 1 cut(s) 2763
LguI GCTCTTC 1 cut(s) 1492
LmnI GCTCC 3 cut(s) 380, 704, 2311
Lsp1109I GCAGC 5 cut(s) 79, 373, 1268, 1995, 2989
LweI GCATC 4 cut(s) 412, 928, 2125, 2395
MabI ACCWGGT 1 cut(s) 1171
MaeI CTAG 7 cut(s) 96, 1070, 1200, 1515, 2210, 2457, 2925
MaeII ACGT 4 cut(s) 1134, 1624, 1957, 2949
MaeIII GTNAC 7 cut(s) 236, 323, 932, 957, 1642, 1921, 2113
MflI RGATCY 9 cut(s) 421, 562, 1179, 1207, 1318, 2393, 2459, 2569, 2996
MhlI GDGCHC 2 cut(s) 1582, 2912
Mly113I GGCGCC 2 cut(s) 1506, 3042
MlyI GAGTC 4 cut(s) 1095, 1232, 2092, 2414
MmeI TCCRAC 3 cut(s) 138, 1157, 2386
Mph1103I ATGCAT 1 cut(s) 2410
MroXI GAANNNNTTC 1 cut(s) 1271
MslI CAYNNNNRTG 4 cut(s) 143, 1151, 2610, 3050
MspA1I CMGCKG 3 cut(s) 119, 386, 1811
MspI CCGG 4 cut(s) 357, 444, 786, 1349
MspR9I CCNGG 6 cut(s) 92, 787, 1173, 1350, 2029, 2399
Mva1269I GAATGC 1 cut(s) 1709
MvaI CCWGG 4 cut(s) 92, 1173, 2029, 2399
MwoI GCNNNNNNNGC 3 cut(s) 34, 478, 3039
NarI GGCGCC 2 cut(s) 1506, 3042
NciI CCSGG 2 cut(s) 787, 1350
NdeI CATATG 1 cut(s) 2532
NlaIV GGNNCC 7 cut(s) 335, 376, 1181, 1320, 1507, 2670, 3043
NmuCI GTSAC 5 cut(s) 236, 323, 932, 1642, 2113
NsiI ATGCAT 1 cut(s) 2410
NspI RCATGY 3 cut(s) 652, 1542, 2114
OliI CACNNNNGTG 1 cut(s) 143
PaeR7I CTCGAG 1 cut(s) 2831
PagI TCATGA 1 cut(s) 1942
PceI AGGCCT 1 cut(s) 2935
PciI ACATGT 1 cut(s) 1538
PciSI GCTCTTC 1 cut(s) 1492
PcsI WCGNNNNNNNCGW 1 cut(s) 951
PctI GAATGC 1 cut(s) 1709
PdmI GAANNNNTTC 1 cut(s) 1271
PflMI CCANNNNNTGG 1 cut(s) 418
PfoI TCCNGGA 2 cut(s) 785, 1348
PkrI GCNGC 6 cut(s) 69, 388, 1283, 1286, 2010, 3004
PleI GAGTC 4 cut(s) 1095, 1232, 2092, 2414
PluTI GGCGCC 2 cut(s) 1509, 3045
PpsI GAGTC 4 cut(s) 1095, 1232, 2092, 2414
Ppu21I YACGTR 2 cut(s) 1135, 1625
PscI ACATGT 1 cut(s) 1538
PshBI ATTAAT 1 cut(s) 2129
Psp124BI GAGCTC 1 cut(s) 1582
Psp6I CCWGG 4 cut(s) 90, 1171, 2027, 2397
PspEI GGTNACC 1 cut(s) 323
PspFI CCCAGC 1 cut(s) 115
PspGI CCWGG 4 cut(s) 90, 1171, 2027, 2397
PspN4I GGNNCC 7 cut(s) 335, 376, 1181, 1320, 1507, 2670, 3043
PspPI GGNCC 5 cut(s) 659, 708, 1778, 1898, 3055
PstI CTGCAG 1 cut(s) 483
PstNI CAGNNNCTG 2 cut(s) 922, 1301
PsuI RGATCY 9 cut(s) 421, 562, 1179, 1207, 1318, 2393, 2459, 2569, 2996
PvuII CAGCTG 3 cut(s) 119, 386, 1811
RsaI GTAC 9 cut(s) 24, 111, 335, 398, 743, 999, 1248, 1607, 1853
RsaNI GTAC 9 cut(s) 23, 110, 334, 397, 742, 998, 1247, 1606, 1852
RseI CAYNNNNRTG 4 cut(s) 143, 1151, 2610, 3050
SacI GAGCTC 1 cut(s) 1582
SalI GTCGAC 1 cut(s) 2417
SapI GCTCTTC 1 cut(s) 1492
SatI GCNGC 6 cut(s) 68, 387, 1282, 1285, 2009, 3003
Sau96I GGNCC 5 cut(s) 659, 708, 1778, 1898, 3055
ScaI AGTACT 3 cut(s) 24, 111, 1607
SchI GAGTC 4 cut(s) 1095, 1232, 2092, 2414
ScrFI CCNGG 6 cut(s) 92, 787, 1173, 1350, 2029, 2399
SduI GDGCHC 2 cut(s) 1582, 2912
SexAI ACCWGGT 1 cut(s) 1171
SfaNI GCATC 4 cut(s) 412, 928, 2125, 2395
SfcI CTRYAG 2 cut(s) 479, 2229
SfoI GGCGCC 2 cut(s) 1507, 3043
Sfr274I CTCGAG 1 cut(s) 2831
SinI GGWCC 4 cut(s) 659, 1778, 1898, 3055
SlaI CTCGAG 1 cut(s) 2831
SmiMI CAYNNNNRTG 4 cut(s) 143, 1151, 2610, 3050
SmlI CTYRAG 6 cut(s) 1075, 1601, 1649, 2100, 2573, 2831
SmoI CTYRAG 6 cut(s) 1075, 1601, 1649, 2100, 2573, 2831
SseBI AGGCCT 1 cut(s) 2935
SsiI CCGC 3 cut(s) 360, 662, 1285
SspDI GGCGCC 2 cut(s) 1505, 3041
SspI AATATT 4 cut(s) 205, 773, 2524, 2554
SspMI CTAG 7 cut(s) 96, 1070, 1200, 1515, 2210, 2457, 2925
SstI GAGCTC 1 cut(s) 1582
StuI AGGCCT 1 cut(s) 2935
StyD4I CCNGG 6 cut(s) 90, 785, 1171, 1348, 2027, 2397
StyI CCWWGG 3 cut(s) 328, 417, 531
TaaI ACNGT 9 cut(s) 145, 215, 928, 1346, 1388, 1408, 2230, 2416, 2887
TaiI ACGT 4 cut(s) 1137, 1627, 1960, 2952
TaqI TCGA 8 cut(s) 348, 939, 954, 1025, 1713, 2337, 2418, 2832
TatI WGTACW 4 cut(s) 22, 109, 1605, 1851
TauI GCSGC 1 cut(s) 1287
TscAI CASTG 8 cut(s) 546, 661, 1239, 1306, 1980, 2179, 2907, 3040
TseFI GTSAC 5 cut(s) 236, 323, 932, 1642, 2113
TseI GCWGC 5 cut(s) 67, 386, 1281, 2008, 3002
Tsp45I GTSAC 5 cut(s) 236, 323, 932, 1642, 2113
TspGWI ACGGA 2 cut(s) 269, 729
TspRI CASTG 8 cut(s) 546, 661, 1239, 1306, 1980, 2179, 2907, 3040
Van91I CCANNNNNTGG 1 cut(s) 418
VneI GTGCAC 1 cut(s) 2908
VpaK11BI GGWCC 4 cut(s) 659, 1778, 1898, 3055
VspI ATTAAT 1 cut(s) 2129
XceI RCATGY 3 cut(s) 652, 1542, 2114
XcmI CCANNNNNNNNNTGG 2 cut(s) 1470, 2470
XhoI CTCGAG 1 cut(s) 2831
XmiI GTMKAC 4 cut(s) 210, 493, 1621, 2418
XmnI GAANNNNTTC 1 cut(s) 1271
XspI CTAG 7 cut(s) 96, 1070, 1200, 1515, 2210, 2457, 2925
ZrmI AGTACT 3 cut(s) 24, 111, 1607
Zsp2I ATGCAT 1 cut(s) 2410
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.