RH5CG009300

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG009300.1

Sequence Viewer

Length: 3162 bp
ATGAGCAAGCCTTCCCATAGAGTACTGCTTACGAAGCTTGTTTTATCCCTCAACTTTCTTTTTTGGCAGCTTGGGTCTGAACTCAAATTCCAGGCTAGAGCTTATGTAGTACTCCCAGCTGATGAAGTTTATACTCTCACAACCGTGATGAACAAGTTGGAGGTAAAGCAAGCGTCAGATATAAATTATACATCTTGCCAGAATATTGTCTACGGTATCACAATCGGCTGTAATTGTTACTACAAGAACAAAACGGAGTGCCATATCACAAAAATTGGTGGAATATGCAGTTCCATGAATGACATAGCTTTAACTTCAGTTATACCAGAAGAAGTTGGTGACCTTCGGTACCTGTCATTCCTCGACCTATCCGGCGGTAAACTTTATGGCTCCATACCAGCTGCATTAGGGTACTTGCATCGTCTCCAAACCTTGGATCTATCAAGCAATCAACTGACCGGCTCAATACCAGACTTGGGGAGATTGCAAAACCTGCAGTCGCTAAGTCTACACCACAACTTGCTGGAAGGCACTATACCACCAACCTTGGGTTCACTGGTGAAGCTTGATAAACTGGATCTCCAGTCTAATAGGTTATTAGGCACAATTCCTGATGAGTTGGGAAATCTCGTCAATCTGACTACATTGGATATTTCTGAGAACATGCTCACTGGTCCGCTTCCCAAAACACTTGGAAATTTGAGTTCCCTCAGCTCCTTCTGGGCCGAAGCCAATTACTTGAATGATGAATTTCCGTACACTTATGGGAAGCTTACAAGTCTAAAATATTTTTCAATATCCGGGAATGATATCTCTGGAACATTACCTGTTGACATCATAAAGAACTGGACTAATATCAAATATCTGACGCTCATGGGAAACAATTTTAAAGGAAATTTGACTGAAGAAGTATTCAATCTGCCATACCTTCAGCATCTGACGGTAAGTGACCTCGAAGACGCTACTTTCGAGTTACCATCAAACATTACGAATACCAACTATGTTTATCTGGTACTGAGGAACTGCTCAATCAATGGTTCGATCCCCAAATACATTGGTGATAAAATGAAATCTCTAACATACCTAGACTTGAGTTTCAACAGCTTAACGGGTGGACTCCCAGAGTATATGAAATCGGATTTATTTTACGTGTCTTTTTCCACAAATATGCTTAATGGGACGATACCTGGTTGGATCCTTCAGGCAGTCCAAACTAGGATAGATCTATCATTCAATAATTTGTCAGCACTGGACTCTGGAGTACCAACAAACCCATATCTGAACTTGTTCGCTTGCTGCCGCAACTCCTCAGCCACTGAACCAGAAATGAGGGATCCATTAGAAATGATGAATACATACTGTCCGGGAAAGAAAAAAAAATACCATTCTTTGTTTATTAACTGTGGTGGTGGAGAAGCAACTGTTAATGGAATTACTTATGAGCAAGATAACGCCACAGCACCCTTCTTCACAAGTCCAAATAAAAACTGGGCGTATAGCTCTTCGTTAGAAGGATTTGGCGCCAATTCTAGTGATTACACGAAGAACATGACATGTGGAATTTCTGTTGCTGACGCACTTTTGTATGATAGAGCTCGTCGTTCCCCTGTATCTCTCAAGTACTATGCTTTCTGTCTACGTGAAGGCAAATATAATGTGACGCTCAAGTTTGCTGAAATTTTATACACCGAAGATACAGACTATACCAGTTTGAGGAAGCGTGCATTCGATATTTATATTCAGGATGAGATTAAAGTGCTACATGATTTCCACATTAGAGAGAACGCAGGAGGTCCAGATAAACCAATTACCAAAAGTTTTACAGCTGTGGTAAATAAAAATAATACTCTATTAACCATCCACATGTACTGGGATGGCAAGGGGTCTATTGAATACAGACCTGCGTTTAATGGACCTCTAATATCAGCTATTTCTGTTACTCCTGAATTCAAAATTCATGATGGGAAACTACGTCCCTTACATATTGCACTGATCGGGATAGGTTCAACCATTATTGCTGTGCTGCTTTTATTGGGTTTTGCCTGGATGGGCTGGTTCAGAAGCAGAAACTCACCCAAAATAAAAGTAGGTGAAGAAAAAAAAGGGGAAGGGACTCAAGACAAGCATGTCACCCTCAAAGAATTAATAGATGCTACTGGAAAGTTTAGCGACAAAAAGATAATTGGCAGTGGCAGTCTTGGGAAAGTTTATGAGGCACAACTACTAGGTCTTATTAAAACTACTGTAGCTGTGAAGAGACTTTCCTCTCATTTTAAAGAAAATATCCAAAAATTGAAAAAGGAAATCAAATGGTTATATGAATTGGAGCATGAAAATCTCATTAAATTGTTCGATTATCATATTGAGAAAGACCTCCAACTTCTTGTTTATGAATACATGGAAAACAGATCCCTGGAAGATGCATTGACTGTCGACTCAACTACTAGATCATTGAAATTTACTTGGGATACTAGATCCAAGATTTGCTTGGGAATAGCAAGGGGTTTGGAGTATCTACACAATCATCGTAAACTAAATATCGCTCATATGAACATTAAAGCTGTAAATATTCTTCTTGATGGAGATCTTGAGCCAAAGATATCAGATTTTGGATTGGCACATCTTTATGTTGAGGAGGATCAATTTAAGCTCATCAAAAGAGAAGTTTCACAAGGATATACGGCACCAGAGTATTTTCAAGGAAATTTGACGATTAAAGCTGATGTTTACAGCTTTGGGGTGATCCTACTTGAAATTGTTTCTTGGAAAAAAAATGTGATCAAATCACACAATGGAACTGAGGTTCTTGTGGACACGGCTAATGAAAAACATGAACAAGGAAATCTCGAGGACATGATTGATAAGAATTTGGAAACTTGCGATACACAACAAGCCCTGACAGTCTTGAAATTAGCAGTGAAGTGCACCAGTATAGCCCCTAGTGTGAGGCCTTCAATGTCTGACGTTGTGAGTGTTCTGCTAAATAAAAAGACGATTGGTGAGCTTTTTAGATCTGCTGCCCCTAATGTTGGGGAAAAGATCAAGGGCAGTGGGGGCGCCACTTCTATGGACCTTACCTCTATACCATCAACTTCATCTCCTTCTACCAACACCAAAGATGAATGGGAAAGTATTTCTGCGGATATTCCTATGAAATCCTGA

Protein Analysis

1053

Amino Acids

117.53

Weight (kDa)

6.46

Isoelectric Point (pI)

33.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 106 - 195 1.5e-07 Leucine-rich repeat region
LRR_4 PF12799 141 - 175 2.6e-06 Leucine Rich repeats (2 copies)
LRR_8 PF13855 141 - 199 1.3e-06 Leucine rich repeat
LRR_14 PF23598 183 - 266 7.1e-07 Leucine-rich repeat region
Malectin PF11721 463 - 644 1.8e-27 Malectin domain
Pkinase PF00069 723 - 990 1e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 725 - 992 3.3e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2126
Acc36I ACCTGC 2 cut(s) 501, 1909
Acc65I GGTACC 1 cut(s) 348
AccB1I GGYRCC 4 cut(s) 348, 1520, 2683, 3056
AccB7I CCANNNNNTGG 1 cut(s) 433
AccI GTMKAC 4 cut(s) 210, 508, 1636, 2433
AciI CCGC 4 cut(s) 375, 677, 1300, 3140
AcuI CTGAAG 4 cut(s) 300, 914, 924, 1184
AcyI GRCGYC 2 cut(s) 1521, 3057
AfaI GTAC 9 cut(s) 24, 111, 350, 413, 758, 1014, 1263, 1622, 1868
AfiI CCNNNNNNNGG 5 cut(s) 433, 476, 548, 1713, 3029
AflIII ACRYGT 3 cut(s) 1149, 1553, 1863
AjnI CCWGG 4 cut(s) 90, 1186, 2042, 2412
AjuI GAANNNNNNNTTGG 2 cut(s) 535, 567
AleI CACNNNNGTG 1 cut(s) 143
AloI GAACNNNNNNTCC 4 cut(s) 72, 104, 2787, 2819
Alw21I GWGCWC 2 cut(s) 1597, 2927
Alw26I GTCTC 2 cut(s) 428, 2251
Alw44I GTGCAC 1 cut(s) 2923
AlwNI CAGNNNCTG 2 cut(s) 937, 1316
Ama87I CYCGRG 1 cut(s) 2846
AoxI GGCC 2 cut(s) 723, 2948
ApaLI GTGCAC 1 cut(s) 2923
ApeKI GCWGC 5 cut(s) 67, 401, 1296, 2023, 3017
ArsI GACNNNNNNTTYG 2 cut(s) 950, 982
AseI ATTAAT 1 cut(s) 2144
Asp700I GAANNNNTTC 1 cut(s) 1286
Asp718I GGTACC 1 cut(s) 348
AspLEI GCGC 2 cut(s) 1523, 3059
AspS9I GGNCC 5 cut(s) 674, 723, 1793, 1913, 3070
AsuC2I CCSGG 2 cut(s) 802, 1365
AsuHPI GGTGA 8 cut(s) 350, 571, 1070, 2064, 2102, 2122, 2752, 3011
AvaI CYCGRG 1 cut(s) 2846
AvaII GGWCC 4 cut(s) 674, 1793, 1913, 3070
BaeGI GKGCMC 1 cut(s) 2927
BamHI GGATCC 2 cut(s) 1194, 1333
BanI GGYRCC 4 cut(s) 348, 1520, 2683, 3056
BanII GRGCYC 1 cut(s) 1597
BarI GAAGNNNNNNTAC 4 cut(s) 519, 551, 2556, 2588
BbsI GAAGAC 1 cut(s) 963
Bbv12I GWGCWC 2 cut(s) 1597, 2927
BbvCI CCTCAGC 2 cut(s) 710, 1309
BbvI GCAGC 5 cut(s) 79, 388, 1283, 2010, 3004
BccI CCATC 7 cut(s) 985, 1865, 1868, 1955, 2041, 2573, 3094
BceAI ACGGC 2 cut(s) 2697, 2832
BciT130I CCWGG 4 cut(s) 92, 1188, 2044, 2414
BciVI GTATCC 1 cut(s) 2461
BclI TGATCA 1 cut(s) 2778
BcnI CCSGG 2 cut(s) 802, 1365
BcoDI GTCTC 2 cut(s) 428, 2251
BfaI CTAG 8 cut(s) 96, 1085, 1215, 1530, 2225, 2445, 2472, 2940
BfmI CTRYAG 2 cut(s) 494, 2244
BfoI RGCGCY 2 cut(s) 1524, 3060
BfuAI ACCTGC 2 cut(s) 501, 1909
BfuI GTATCC 1 cut(s) 2461
BglII AGATCT 3 cut(s) 1222, 2584, 3011
BisI GCNGC 6 cut(s) 68, 402, 1297, 1300, 2024, 3018
BlsI GCNGC 6 cut(s) 69, 403, 1298, 1301, 2025, 3019
BmcAI AGTACT 3 cut(s) 24, 111, 1622
Bme1390I CCNGG 6 cut(s) 92, 802, 1188, 1365, 2044, 2414
Bme18I GGWCC 4 cut(s) 674, 1793, 1913, 3070
BmeT110I CYCGRG 1 cut(s) 2846
BmgT120I GGNCC 5 cut(s) 674, 723, 1793, 1913, 3070
BmiI GGNNCC 7 cut(s) 350, 391, 1196, 1335, 1522, 2685, 3058
BmrFI CCNGG 6 cut(s) 92, 802, 1188, 1365, 2044, 2414
BmrI ACTGGG 2 cut(s) 1498, 1879
BmsI GCATC 4 cut(s) 427, 943, 2140, 2410
BmuI ACTGGG 2 cut(s) 1498, 1879
BpiI GAAGAC 1 cut(s) 963
BpmI CTGGAG 2 cut(s) 566, 1278
Bpu10I CCTNAGC 2 cut(s) 710, 1309
BpuEI CTTGAG 5 cut(s) 1111, 1601, 1649, 2100, 2609
BpuMI CCSGG 2 cut(s) 802, 1365
BsaAI YACGTR 2 cut(s) 1150, 1640
BsaBI GATNNNNATC 1 cut(s) 2583
BsaHI GRCGYC 2 cut(s) 1521, 3057
BsaJI CCNNGG 3 cut(s) 432, 546, 2412
BsaXI ACNNNNNCTCC 4 cut(s) 564, 594, 3082, 3112
Bsc4I CCNNNNNNNGG 5 cut(s) 433, 476, 548, 1713, 3029
Bse118I RCCGGY 1 cut(s) 458
Bse8I GATNNNNATC 1 cut(s) 2583
BseBI CCWGG 4 cut(s) 92, 1188, 2044, 2414
BseDI CCNNGG 3 cut(s) 432, 546, 2412
BseGI GGATG 4 cut(s) 1750, 1857, 1879, 2052
BseJI GATNNNNATC 1 cut(s) 2583
BseLI CCNNNNNNNGG 5 cut(s) 433, 476, 548, 1713, 3029
BseMII CTCAG 5 cut(s) 648, 724, 1007, 1323, 2790
BseRI GAGGAG 2 cut(s) 1297, 2648
BseSI GKGCMC 1 cut(s) 2927
BseXI GCAGC 5 cut(s) 79, 388, 1283, 2010, 3004
BseYI CCCAGC 1 cut(s) 115
BshFI GGCC 2 cut(s) 725, 2950
BshNI GGYRCC 4 cut(s) 348, 1520, 2683, 3056
BsiHKAI GWGCWC 2 cut(s) 1597, 2927
BsiHKCI CYCGRG 1 cut(s) 2846
BsiSI CCGG 4 cut(s) 372, 459, 801, 1364
BslFI GGGAC 3 cut(s) 1192, 1959, 2125
BslI CCNNNNNNNGG 5 cut(s) 433, 476, 548, 1713, 3029
BsmAI GTCTC 2 cut(s) 428, 2251
BsmBI CGTCTC 1 cut(s) 428
BsmFI GGGAC 3 cut(s) 1192, 1959, 2125
BsmI GAATGC 1 cut(s) 1724
BsnI GGCC 2 cut(s) 725, 2950
BsoBI CYCGRG 1 cut(s) 2846
Bsp1286I GDGCHC 2 cut(s) 1597, 2927
BspACI CCGC 4 cut(s) 375, 677, 1300, 3140
BspANI GGCC 2 cut(s) 725, 2950
BspCNI CTCAG 5 cut(s) 649, 723, 1008, 1322, 2791
BspHI TCATGA 1 cut(s) 1957
BspLI GGNNCC 7 cut(s) 350, 391, 1196, 1335, 1522, 2685, 3058
BspMAI CTGCAG 1 cut(s) 498
BspMI ACCTGC 2 cut(s) 501, 1909
BspQI GCTCTTC 1 cut(s) 1507
BspT107I GGYRCC 4 cut(s) 348, 1520, 2683, 3056
BsrFI RCCGGY 1 cut(s) 458
BssAI RCCGGY 1 cut(s) 458
BssECI CCNNGG 3 cut(s) 432, 546, 2412
BssNI GRCGYC 2 cut(s) 1521, 3057
BssT1I CCWWGG 2 cut(s) 432, 546
Bst2UI CCWGG 4 cut(s) 92, 1188, 2044, 2414
Bst4CI ACNGT 9 cut(s) 145, 215, 943, 1361, 1403, 1423, 2245, 2431, 2902
Bst6I CTCTTC 2 cut(s) 1507, 2249
BstACI GRCGYC 2 cut(s) 1521, 3057
BstAPI GCANNNNNTGC 1 cut(s) 493
BstBAI YACGTR 2 cut(s) 1150, 1640
BstC8I GCNNGC 4 cut(s) 8, 171, 1294, 1722
BstDEI CTNAG 6 cut(s) 503, 657, 710, 1016, 1309, 2799
BstEII GGTNACC 1 cut(s) 338
BstF5I GGATG 4 cut(s) 1750, 1857, 1879, 2052
BstH2I RGCGCY 2 cut(s) 1524, 3060
BstHHI GCGC 2 cut(s) 1523, 3059
BstMAI GTCTC 2 cut(s) 428, 2251
BstMWI GCNNNNNNNGC 3 cut(s) 34, 493, 3054
BstNI CCWGG 4 cut(s) 92, 1188, 2044, 2414
BstNSI RCATGY 4 cut(s) 667, 1557, 1867, 2129
BstPI GGTNACC 1 cut(s) 338
BstSCI CCNGG 6 cut(s) 90, 800, 1186, 1363, 2042, 2412
BstSFI CTRYAG 2 cut(s) 494, 2244
BstSLI GKGCMC 1 cut(s) 2927
BstV1I GCAGC 5 cut(s) 79, 388, 1283, 2010, 3004
BstV2I GAAGAC 1 cut(s) 963
BstX2I RGATCY 9 cut(s) 436, 577, 1194, 1222, 1333, 2408, 2474, 2584, 3011
BstXI CCANNNNNNTGG 1 cut(s) 3067
BstYI RGATCY 9 cut(s) 436, 577, 1194, 1222, 1333, 2408, 2474, 2584, 3011
BsuI GTATCC 1 cut(s) 2461
BsuRI GGCC 2 cut(s) 725, 2950
BtsCI GGATG 4 cut(s) 1750, 1857, 1879, 2052
BtsI GCAGTG 3 cut(s) 2194, 2922, 3055
BtsIMutI CAGTG 8 cut(s) 554, 669, 1247, 1314, 1988, 2194, 2922, 3055
BveI ACCTGC 2 cut(s) 501, 1909
Cac8I GCNNGC 4 cut(s) 8, 171, 1294, 1722
CaiI CAGNNNCTG 2 cut(s) 937, 1316
CciI TCATGA 1 cut(s) 1957
CfoI GCGC 2 cut(s) 1523, 3059
Cfr10I RCCGGY 1 cut(s) 458
Cfr13I GGNCC 5 cut(s) 674, 723, 1793, 1913, 3070
CseI GACGC 5 cut(s) 162, 877, 968, 1583, 1669
CsiI ACCWGGT 1 cut(s) 1186
Csp6I GTAC 9 cut(s) 23, 110, 349, 412, 757, 1013, 1262, 1621, 1867
CspCI CAANNNNNGTGG 4 cut(s) 528, 563, 3031, 3066
CviQI GTAC 9 cut(s) 23, 110, 349, 412, 757, 1013, 1262, 1621, 1867
DdeI CTNAG 6 cut(s) 503, 657, 710, 1016, 1309, 2799
DinI GGCGCC 2 cut(s) 1522, 3058
DraI TTTAAA 2 cut(s) 889, 2275
DrdI GACNNNNNNGTC 1 cut(s) 2126
DseDI GACNNNNNNGTC 1 cut(s) 2126
Eam1104I CTCTTC 2 cut(s) 1507, 2249
EarI CTCTTC 2 cut(s) 1507, 2249
Ecl136II GAGCTC 1 cut(s) 1595
Eco130I CCWWGG 2 cut(s) 432, 546
Eco147I AGGCCT 1 cut(s) 2950
Eco24I GRGCYC 1 cut(s) 1597
Eco32I GATATC 2 cut(s) 811, 2601
Eco47I GGWCC 4 cut(s) 674, 1793, 1913, 3070
Eco53kI GAGCTC 1 cut(s) 1595
Eco57I CTGAAG 4 cut(s) 300, 914, 924, 1184
Eco88I CYCGRG 1 cut(s) 2846
Eco91I GGTNACC 1 cut(s) 338
EcoICRI GAGCTC 1 cut(s) 1595
EcoO65I GGTNACC 1 cut(s) 338
EcoRI GAATTC 1 cut(s) 1946
EcoRII CCWGG 4 cut(s) 90, 1186, 2042, 2412
EcoRV GATATC 2 cut(s) 811, 2601
EcoT14I CCWWGG 2 cut(s) 432, 546
EcoT22I ATGCAT 1 cut(s) 2425
EcoT38I GRGCYC 1 cut(s) 1597
EgeI GGCGCC 2 cut(s) 1522, 3058
EheI GGCGCC 2 cut(s) 1522, 3058
ErhI CCWWGG 2 cut(s) 432, 546
Esp3I CGTCTC 1 cut(s) 428
FalI AAGNNNNNCTT 2 cut(s) 2471, 2503
FaqI GGGAC 3 cut(s) 1192, 1959, 2125
FauNDI CATATG 1 cut(s) 2547
FbaI TGATCA 1 cut(s) 2778
FblI GTMKAC 4 cut(s) 210, 508, 1636, 2433
Fnu4HI GCNGC 6 cut(s) 68, 402, 1297, 1300, 2024, 3018
FokI GGATG 4 cut(s) 1757, 1844, 1886, 2059
FriOI GRGCYC 1 cut(s) 1597
Fsp4HI GCNGC 6 cut(s) 68, 402, 1297, 1300, 2024, 3018
FspBI CTAG 8 cut(s) 96, 1085, 1215, 1530, 2225, 2445, 2472, 2940
GlaI GCGC 2 cut(s) 1522, 3058
GluI GCNGC 6 cut(s) 68, 402, 1297, 1300, 2024, 3018
GsaI CCCAGC 1 cut(s) 119
GsuI CTGGAG 2 cut(s) 566, 1278
HaeII RGCGCY 2 cut(s) 1524, 3060
HaeIII GGCC 2 cut(s) 725, 2950
HapII CCGG 4 cut(s) 372, 459, 801, 1364
HgaI GACGC 5 cut(s) 162, 877, 968, 1583, 1669
HhaI GCGC 2 cut(s) 1523, 3059
Hin1I GRCGYC 2 cut(s) 1521, 3057
Hin6I GCGC 2 cut(s) 1521, 3057
HinP1I GCGC 2 cut(s) 1521, 3057
HincII GTYRAC 2 cut(s) 832, 2434
HindII GTYRAC 2 cut(s) 832, 2434
HindIII AAGCTT 3 cut(s) 35, 563, 770
HinfI GANTC 4 cut(s) 1116, 1253, 2113, 2435
HpaII CCGG 4 cut(s) 372, 459, 801, 1364
HphI GGTGA 8 cut(s) 350, 571, 1070, 2064, 2102, 2122, 2752, 3011
Hpy99I CGWCG 1 cut(s) 1602
HpyCH4III ACNGT 9 cut(s) 145, 215, 943, 1361, 1403, 1423, 2245, 2431, 2902
HpyCH4IV ACGT 4 cut(s) 1149, 1639, 1972, 2964
HpyCH4V TGCA 9 cut(s) 288, 404, 418, 487, 496, 1724, 1988, 2423, 2925
HpyF10VI GCNNNNNNNGC 3 cut(s) 34, 493, 3054
HpyF3I CTNAG 6 cut(s) 503, 657, 710, 1016, 1309, 2799
HpySE526I ACGT 4 cut(s) 1149, 1639, 1972, 2964
Hsp92I GRCGYC 2 cut(s) 1521, 3057
HspAI GCGC 2 cut(s) 1521, 3057
KasI GGCGCC 2 cut(s) 1520, 3056
KpnI GGTACC 1 cut(s) 352
Ksp22I TGATCA 1 cut(s) 2778
LguI GCTCTTC 1 cut(s) 1507
LmnI GCTCC 3 cut(s) 395, 719, 2326
Lsp1109I GCAGC 5 cut(s) 79, 388, 1283, 2010, 3004
LweI GCATC 4 cut(s) 427, 943, 2140, 2410
MabI ACCWGGT 1 cut(s) 1186
MaeI CTAG 8 cut(s) 96, 1085, 1215, 1530, 2225, 2445, 2472, 2940
MaeII ACGT 4 cut(s) 1149, 1639, 1972, 2964
MaeIII GTNAC 7 cut(s) 236, 338, 947, 972, 1657, 1936, 2128
MflI RGATCY 9 cut(s) 436, 577, 1194, 1222, 1333, 2408, 2474, 2584, 3011
MhlI GDGCHC 2 cut(s) 1597, 2927
Mly113I GGCGCC 2 cut(s) 1521, 3057
MlyI GAGTC 4 cut(s) 1110, 1247, 2107, 2429
MmeI TCCRAC 3 cut(s) 138, 1172, 2401
Mph1103I ATGCAT 1 cut(s) 2425
MroXI GAANNNNTTC 1 cut(s) 1286
MslI CAYNNNNRTG 5 cut(s) 143, 1166, 1862, 2625, 3065
MspA1I CMGCKG 3 cut(s) 119, 401, 1826
MspI CCGG 4 cut(s) 372, 459, 801, 1364
MspR9I CCNGG 6 cut(s) 92, 802, 1188, 1365, 2044, 2414
Mva1269I GAATGC 1 cut(s) 1724
MvaI CCWGG 4 cut(s) 92, 1188, 2044, 2414
MwoI GCNNNNNNNGC 3 cut(s) 34, 493, 3054
NarI GGCGCC 2 cut(s) 1521, 3057
NciI CCSGG 2 cut(s) 802, 1365
NdeI CATATG 1 cut(s) 2547
NlaIV GGNNCC 7 cut(s) 350, 391, 1196, 1335, 1522, 2685, 3058
NmuCI GTSAC 4 cut(s) 338, 947, 1657, 2128
NsiI ATGCAT 1 cut(s) 2425
NspI RCATGY 4 cut(s) 667, 1557, 1867, 2129
OliI CACNNNNGTG 1 cut(s) 143
PaeR7I CTCGAG 1 cut(s) 2846
PagI TCATGA 1 cut(s) 1957
PceI AGGCCT 1 cut(s) 2950
PciI ACATGT 2 cut(s) 1553, 1863
PciSI GCTCTTC 1 cut(s) 1507
PcsI WCGNNNNNNNCGW 1 cut(s) 966
PctI GAATGC 1 cut(s) 1724
PdmI GAANNNNTTC 1 cut(s) 1286
PflMI CCANNNNNTGG 1 cut(s) 433
PfoI TCCNGGA 2 cut(s) 800, 1363
PkrI GCNGC 6 cut(s) 69, 403, 1298, 1301, 2025, 3019
PleI GAGTC 4 cut(s) 1110, 1247, 2107, 2429
PluTI GGCGCC 2 cut(s) 1524, 3060
PpsI GAGTC 4 cut(s) 1110, 1247, 2107, 2429
Ppu21I YACGTR 2 cut(s) 1150, 1640
PscI ACATGT 2 cut(s) 1553, 1863
PshBI ATTAAT 1 cut(s) 2144
Psp124BI GAGCTC 1 cut(s) 1597
Psp6I CCWGG 4 cut(s) 90, 1186, 2042, 2412
PspEI GGTNACC 1 cut(s) 338
PspFI CCCAGC 1 cut(s) 115
PspGI CCWGG 4 cut(s) 90, 1186, 2042, 2412
PspN4I GGNNCC 7 cut(s) 350, 391, 1196, 1335, 1522, 2685, 3058
PspPI GGNCC 5 cut(s) 674, 723, 1793, 1913, 3070
PstI CTGCAG 1 cut(s) 498
PstNI CAGNNNCTG 2 cut(s) 937, 1316
PsuI RGATCY 9 cut(s) 436, 577, 1194, 1222, 1333, 2408, 2474, 2584, 3011
PvuII CAGCTG 3 cut(s) 119, 401, 1826
RsaI GTAC 9 cut(s) 24, 111, 350, 413, 758, 1014, 1263, 1622, 1868
RsaNI GTAC 9 cut(s) 23, 110, 349, 412, 757, 1013, 1262, 1621, 1867
RseI CAYNNNNRTG 5 cut(s) 143, 1166, 1862, 2625, 3065
SacI GAGCTC 1 cut(s) 1597
SalI GTCGAC 1 cut(s) 2432
SapI GCTCTTC 1 cut(s) 1507
SatI GCNGC 6 cut(s) 68, 402, 1297, 1300, 2024, 3018
Sau96I GGNCC 5 cut(s) 674, 723, 1793, 1913, 3070
ScaI AGTACT 3 cut(s) 24, 111, 1622
SchI GAGTC 4 cut(s) 1110, 1247, 2107, 2429
ScrFI CCNGG 6 cut(s) 92, 802, 1188, 1365, 2044, 2414
SduI GDGCHC 2 cut(s) 1597, 2927
SexAI ACCWGGT 1 cut(s) 1186
SfaNI GCATC 4 cut(s) 427, 943, 2140, 2410
SfcI CTRYAG 2 cut(s) 494, 2244
SfoI GGCGCC 2 cut(s) 1522, 3058
Sfr274I CTCGAG 1 cut(s) 2846
SinI GGWCC 4 cut(s) 674, 1793, 1913, 3070
SlaI CTCGAG 1 cut(s) 2846
SmiMI CAYNNNNRTG 5 cut(s) 143, 1166, 1862, 2625, 3065
SmlI CTYRAG 6 cut(s) 1090, 1616, 1664, 2115, 2588, 2846
SmoI CTYRAG 6 cut(s) 1090, 1616, 1664, 2115, 2588, 2846
SseBI AGGCCT 1 cut(s) 2950
SsiI CCGC 4 cut(s) 375, 677, 1300, 3140
SspDI GGCGCC 2 cut(s) 1520, 3056
SspI AATATT 3 cut(s) 205, 788, 2569
SspMI CTAG 8 cut(s) 96, 1085, 1215, 1530, 2225, 2445, 2472, 2940
SstI GAGCTC 1 cut(s) 1597
StuI AGGCCT 1 cut(s) 2950
StyD4I CCNGG 6 cut(s) 90, 800, 1186, 1363, 2042, 2412
StyI CCWWGG 2 cut(s) 432, 546
TaaI ACNGT 9 cut(s) 145, 215, 943, 1361, 1403, 1423, 2245, 2431, 2902
TaiI ACGT 4 cut(s) 1152, 1642, 1975, 2967
TaqI TCGA 8 cut(s) 363, 954, 969, 1040, 1728, 2352, 2433, 2847
TatI WGTACW 4 cut(s) 22, 109, 1620, 1866
TauI GCSGC 1 cut(s) 1302
TscAI CASTG 8 cut(s) 561, 676, 1254, 1321, 1995, 2194, 2922, 3055
TseFI GTSAC 4 cut(s) 338, 947, 1657, 2128
TseI GCWGC 5 cut(s) 67, 401, 1296, 2023, 3017
Tsp45I GTSAC 4 cut(s) 338, 947, 1657, 2128
TspGWI ACGGA 2 cut(s) 269, 744
TspRI CASTG 8 cut(s) 561, 676, 1254, 1321, 1995, 2194, 2922, 3055
Van91I CCANNNNNTGG 1 cut(s) 433
VneI GTGCAC 1 cut(s) 2923
VpaK11BI GGWCC 4 cut(s) 674, 1793, 1913, 3070
VspI ATTAAT 1 cut(s) 2144
XceI RCATGY 4 cut(s) 667, 1557, 1867, 2129
XcmI CCANNNNNNNNNTGG 2 cut(s) 1485, 2485
XhoI CTCGAG 1 cut(s) 2846
XmiI GTMKAC 4 cut(s) 210, 508, 1636, 2433
XmnI GAANNNNTTC 1 cut(s) 1286
XspI CTAG 8 cut(s) 96, 1085, 1215, 1530, 2225, 2445, 2472, 2940
ZrmI AGTACT 3 cut(s) 24, 111, 1622
Zsp2I ATGCAT 1 cut(s) 2425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.