Rorug04G0389300

Belongs to the cystatin family. Phytocystatin subfamily

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
55751292 .. 55754635
3344 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0389300.1

Sequence Viewer

Length: 1407 bp
ATGGATAGAAGTCAGAAACACAAGATTCACCAAAAGATGTCGGTCGTGGACGAGTCTCCCGTGAAACGTGATCTGGTGGTATGGTATCACAATCCCTATACCGGCGTCGAAATTTACTCCATGCTTGAGGTCCACCCGGATAACAAGAATAAGCGACGTTTGGAGTTTGAGCTCCCTCCCCATAGGTCAATTAAGAAGCTCCACCGAATTGCCTGCAACGCTAGTTGCTCATCTGTATCAGAATGGGCAAGTCTTCCGAAGGACATTCTCCTTTTGATGTTGCACAAGTTGTTCGAACCCATTGACCATGTTCGTCTGGCTGCTGTTTGCAACCATTGGCATAAAGTCTCCAAAGAGCATAATCATACAACTCAGCGCTGGTGCAACCTACTTCCAATGCTCCTGATCCCCCCCTCCCGCCCCCCTAGCCGAATGAAGCAAATGGTTTATAGCCTTTCTGAAGGAGAAACCTATACAAACGTTCAATTACCGGTGCCTTATGATAGGAGGTGCTGTGGCTCCAGCCATGGTTGGTTGGCCACAGCACACGAGAATTTCGCCATAACTCTTTTGAATCCTTTCAGAAAAGCAGCGGCCATTCATTTGCCTCCCTTGACAACCCCACATAATCTCCAAGACTGCCAATTTGGGTTGCAGAAGTTCCAGGATCAGTTGAAGAAGCGCTACGACTATTATGTCTGTAAGGTTATATTATCTGCTGACCCGTCTTTGAATCCGCATAATTATGTGGTTGTGGCAACCTACGACTATTGTTGCAGGTTGGCTTTCATTAAAGCAGGACAAAGAGATTGGACTTATGTCGAGAAAACATATATGTTTTCTGATGCTATTTTTCACAGAAATGAAATTTATGCAGTTGGACTAGGGGGAATAATTGCGTCAGTTGATGTCAATAGTAGTAATGATCCTTCGCGGCCGCCAAAAGCAATTCCACTTACACGTTTACGACCAATGGAACACCCTCTGTTCCCATACAAAGCAGATAAGGCATATCTTGTTGAATCAACCAATGGAGACTTGCTGCATGTTCGAAGGTTTTTGAAACGAAAGGAAGGTCTTGATCAAAAGCTGGGGGTTATCAATTTTGTGGTATACAAGGTGTTATTCAACGACAACGATGGGACCTTTGTGAGGCAGGATCTGGTAGACAGCATTGGGGATGATGCTTTGTTCTTGGGTGATAATCATTCAATATCTGTTTTGGCTTCAAATTTTCCTAGGTGCCAACCAAATTCCATTTACTTCACAAATGACATTAGGAATGGTGGTATGGGTATCTTCAATTTAGCAGACAAAACCGTCACACAACACTACCCTCTAAATCCCAGTGAGAGGTACATCCGACCCGCTATATGGATTGTGCCACCGTTCAATGGTCTTCGCTAG

Protein Analysis

468

Amino Acids

53.86

Weight (kDa)

9.06

Isoelectric Point (pI)

46.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 82 - 118 2.3e-06 F-box-like
Beta-prop_KIB1-4 PF03478 149 - 435 4.4e-53 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 695, 1319
Acc36I ACCTGC 1 cut(s) 768
AccB1I GGYRCC 2 cut(s) 493, 1242
AccI GTMKAC 2 cut(s) 1113, 1167
AccII CGCG 1 cut(s) 934
AciI CCGC 6 cut(s) 418, 593, 737, 934, 938, 1368
AclI AACGTT 1 cut(s) 480
AclWI GGATC 4 cut(s) 400, 675, 920, 1167
AcoI YGGCCR 3 cut(s) 537, 594, 935
AcsI RAATTY 5 cut(s) 111, 553, 867, 1231, 1252
AcuI CTGAAG 1 cut(s) 480
AcyI GRCGYC 1 cut(s) 105
AfaI GTAC 1 cut(s) 1358
AfeI AGCGCT 2 cut(s) 377, 683
AfiI CCNNNNNNNGG 5 cut(s) 101, 1152, 1353, 1374, 1394
AflIII ACRYGT 1 cut(s) 959
AgeI ACCGGT 1 cut(s) 490
AjnI CCWGG 1 cut(s) 663
AluBI AGCT 3 cut(s) 172, 199, 1090
AluI AGCT 3 cut(s) 172, 199, 1090
Alw21I GWGCWC 1 cut(s) 174
Alw26I GTCTC 3 cut(s) 60, 352, 1029
AlwI GGATC 4 cut(s) 400, 675, 920, 1167
AlwNI CAGNNNCTG 1 cut(s) 1162
Aor51HI AGCGCT 2 cut(s) 377, 683
AoxI GGCC 3 cut(s) 537, 594, 935
ApeKI GCWGC 3 cut(s) 320, 590, 1042
ApoI RAATTY 5 cut(s) 111, 553, 867, 1231, 1252
ArsI GACNNNNNNTTYG 4 cut(s) 629, 661, 1060, 1092
AsiGI ACCGGT 1 cut(s) 490
Asp700I GAANNNNTTC 1 cut(s) 578
AspA2I CCTAGG 1 cut(s) 1238
AspLEI GCGC 2 cut(s) 378, 684
AspS9I GGNCC 2 cut(s) 130, 1143
AsuC2I CCSGG 1 cut(s) 137
AsuHPI GGTGA 2 cut(s) 20, 1211
AsuII TTCGAA 2 cut(s) 294, 1051
AvaII GGWCC 2 cut(s) 130, 1143
AvrII CCTAGG 1 cut(s) 1238
BalI TGGCCA 1 cut(s) 539
BanI GGYRCC 2 cut(s) 493, 1242
BanII GRGCYC 1 cut(s) 174
BarI GAAGNNNNNNTAC 4 cut(s) 668, 700, 913, 945
BauI CACGAG 1 cut(s) 548
BbsI GAAGAC 2 cut(s) 245, 1391
Bbv12I GWGCWC 1 cut(s) 174
BbvI GCAGC 3 cut(s) 307, 602, 1029
BccI CCATC 1 cut(s) 1133
BcgI CGANNNNNNTGC 2 cut(s) 195, 229
BciT130I CCWGG 1 cut(s) 665
BclI TGATCA 1 cut(s) 1081
BcnI CCSGG 1 cut(s) 137
BcoDI GTCTC 3 cut(s) 60, 352, 1029
BfaI CTAG 5 cut(s) 222, 426, 884, 1239, 1405
BfoI RGCGCY 2 cut(s) 379, 685
BfuAI ACCTGC 1 cut(s) 768
BisI GCNGC 6 cut(s) 321, 591, 594, 935, 938, 1043
BlnI CCTAGG 1 cut(s) 1238
BlsI GCNGC 6 cut(s) 322, 592, 595, 936, 939, 1044
Bme1390I CCNGG 2 cut(s) 137, 665
Bme18I GGWCC 2 cut(s) 130, 1143
BmgT120I GGNCC 2 cut(s) 130, 1143
BmiI GGNNCC 4 cut(s) 495, 520, 1144, 1244
BmrFI CCNGG 2 cut(s) 137, 665
BmrI ACTGGG 1 cut(s) 1341
BmsI GCATC 2 cut(s) 835, 1174
BmuI ACTGGG 1 cut(s) 1341
BoxI GACNNNNGTC 1 cut(s) 818
BpiI GAAGAC 2 cut(s) 245, 1391
BpmI CTGGAG 1 cut(s) 505
Bpu14I TTCGAA 2 cut(s) 294, 1051
BpuEI CTTGAG 1 cut(s) 146
BpuMI CCSGG 1 cut(s) 137
BsaHI GRCGYC 1 cut(s) 105
BsaJI CCNNGG 2 cut(s) 526, 1238
BsaWI WCCGGW 1 cut(s) 490
BsaXI ACNNNNNCTCC 4 cut(s) 499, 529, 615, 645
Bsc4I CCNNNNNNNGG 5 cut(s) 101, 1152, 1353, 1374, 1394
Bse118I RCCGGY 2 cut(s) 101, 490
Bse1I ACTGG 1 cut(s) 1347
BseBI CCWGG 1 cut(s) 665
BseDI CCNNGG 2 cut(s) 526, 1238
BseGI GGATG 2 cut(s) 1186, 1359
BseLI CCNNNNNNNGG 5 cut(s) 101, 1152, 1353, 1374, 1394
BseMII CTCAG 1 cut(s) 386
BseNI ACTGG 1 cut(s) 1347
BseX3I CGGCCG 1 cut(s) 935
BseXI GCAGC 3 cut(s) 307, 602, 1029
BseYI CCCAGC 1 cut(s) 1090
Bsh1236I CGCG 1 cut(s) 934
Bsh1285I CGRYCG 2 cut(s) 45, 938
BshFI GGCC 3 cut(s) 539, 596, 937
BshNI GGYRCC 2 cut(s) 493, 1242
BshTI ACCGGT 1 cut(s) 490
BsiEI CGRYCG 2 cut(s) 45, 938
BsiHKAI GWGCWC 1 cut(s) 174
BsiSI CCGG 3 cut(s) 102, 137, 491
BslFI GGGAC 1 cut(s) 1156
BslI CCNNNNNNNGG 5 cut(s) 101, 1152, 1353, 1374, 1394
BsmAI GTCTC 3 cut(s) 60, 352, 1029
BsmFI GGGAC 1 cut(s) 1156
BsnI GGCC 3 cut(s) 539, 596, 937
Bsp119I TTCGAA 2 cut(s) 294, 1051
Bsp1286I GDGCHC 1 cut(s) 174
Bsp143I GATC 6 cut(s) 70, 405, 667, 925, 1081, 1159
Bsp19I CCATGG 1 cut(s) 526
BspACI CCGC 6 cut(s) 418, 593, 737, 934, 938, 1368
BspANI GGCC 3 cut(s) 539, 596, 937
BspCNI CTCAG 1 cut(s) 385
BspFNI CGCG 1 cut(s) 934
BspLI GGNNCC 4 cut(s) 495, 520, 1144, 1244
BspMI ACCTGC 1 cut(s) 768
BspPI GGATC 4 cut(s) 400, 675, 920, 1167
BspT104I TTCGAA 2 cut(s) 294, 1051
BspT107I GGYRCC 2 cut(s) 493, 1242
BsrFI RCCGGY 2 cut(s) 101, 490
BsrI ACTGG 1 cut(s) 1347
BssAI RCCGGY 2 cut(s) 101, 490
BssECI CCNNGG 2 cut(s) 526, 1238
BssMI GATC 6 cut(s) 70, 405, 667, 925, 1081, 1159
BssNAI GTATAC 1 cut(s) 1114
BssNI GRCGYC 1 cut(s) 105
BssSI CACGAG 1 cut(s) 548
BssT1I CCWWGG 2 cut(s) 526, 1238
Bst1107I GTATAC 1 cut(s) 1114
Bst2BI CACGAG 1 cut(s) 548
Bst2UI CCWGG 1 cut(s) 665
Bst4CI ACNGT 2 cut(s) 1321, 1389
BstACI GRCGYC 1 cut(s) 105
BstBI TTCGAA 2 cut(s) 294, 1051
BstC8I GCNNGC 1 cut(s) 214
BstDEI CTNAG 1 cut(s) 372
BstDSI CCRYGG 1 cut(s) 526
BstENI CCTNNNNNAGG 1 cut(s) 1150
BstF5I GGATG 2 cut(s) 1186, 1359
BstFNI CGCG 1 cut(s) 934
BstH2I RGCGCY 2 cut(s) 379, 685
BstHHI GCGC 2 cut(s) 378, 684
BstKTI GATC 6 cut(s) 73, 408, 670, 928, 1084, 1162
BstMAI GTCTC 3 cut(s) 60, 352, 1029
BstMBI GATC 6 cut(s) 70, 405, 667, 925, 1081, 1159
BstMCI CGRYCG 2 cut(s) 45, 938
BstMWI GCNNNNNNNGC 3 cut(s) 218, 426, 1007
BstNI CCWGG 1 cut(s) 665
BstNSI RCATGY 1 cut(s) 1049
BstPAI GACNNNNGTC 1 cut(s) 818
BstSCI CCNGG 2 cut(s) 135, 663
BstUI CGCG 1 cut(s) 934
BstV1I GCAGC 3 cut(s) 307, 602, 1029
BstV2I GAAGAC 2 cut(s) 245, 1391
BstX2I RGATCY 1 cut(s) 1159
BstYI RGATCY 1 cut(s) 1159
BstZ17I GTATAC 1 cut(s) 1114
BstZI CGGCCG 1 cut(s) 935
BsuRI GGCC 3 cut(s) 539, 596, 937
BtgI CCRYGG 1 cut(s) 526
BtsCI GGATG 2 cut(s) 1186, 1359
BtsIMutI CAGTG 1 cut(s) 1354
BveI ACCTGC 1 cut(s) 768
Cac8I GCNNGC 1 cut(s) 214
CaiI CAGNNNCTG 1 cut(s) 1162
CciNI GCGGCCGC 1 cut(s) 935
CfoI GCGC 2 cut(s) 378, 684
Cfr10I RCCGGY 2 cut(s) 101, 490
Cfr13I GGNCC 2 cut(s) 130, 1143
CseI GACGC 2 cut(s) 94, 888
Csp6I GTAC 1 cut(s) 1357
CspAI ACCGGT 1 cut(s) 490
CviAII CATG 4 cut(s) 121, 308, 527, 1046
CviQI GTAC 1 cut(s) 1357
DdeI CTNAG 1 cut(s) 372
DpnI GATC 6 cut(s) 72, 407, 669, 927, 1083, 1161
DpnII GATC 6 cut(s) 70, 405, 667, 925, 1081, 1159
DrdI GACNNNNNNGTC 2 cut(s) 695, 1319
DseDI GACNNNNNNGTC 2 cut(s) 695, 1319
EaeI YGGCCR 3 cut(s) 537, 594, 935
EagI CGGCCG 1 cut(s) 935
Ecl136II GAGCTC 1 cut(s) 172
EclXI CGGCCG 1 cut(s) 935
Eco130I CCWWGG 2 cut(s) 526, 1238
Eco24I GRGCYC 1 cut(s) 174
Eco47I GGWCC 2 cut(s) 130, 1143
Eco47III AGCGCT 2 cut(s) 377, 683
Eco52I CGGCCG 1 cut(s) 935
Eco53kI GAGCTC 1 cut(s) 172
Eco57I CTGAAG 1 cut(s) 480
EcoICRI GAGCTC 1 cut(s) 172
EcoNI CCTNNNNNAGG 1 cut(s) 1150
EcoO109I RGGNCCY 1 cut(s) 1143
EcoRII CCWGG 1 cut(s) 663
EcoT14I CCWWGG 2 cut(s) 526, 1238
EcoT38I GRGCYC 1 cut(s) 174
ErhI CCWWGG 2 cut(s) 526, 1238
FaeI CATG 4 cut(s) 124, 311, 530, 1049
FaqI GGGAC 1 cut(s) 1156
FatI CATG 4 cut(s) 120, 307, 526, 1045
FauI CCCGC 2 cut(s) 425, 1375
FbaI TGATCA 1 cut(s) 1081
FblI GTMKAC 2 cut(s) 1113, 1167
Fnu4HI GCNGC 6 cut(s) 321, 591, 594, 935, 938, 1043
FokI GGATG 2 cut(s) 1193, 1346
FriOI GRGCYC 1 cut(s) 174
Fsp4HI GCNGC 6 cut(s) 321, 591, 594, 935, 938, 1043
FspBI CTAG 5 cut(s) 222, 426, 884, 1239, 1405
GlaI GCGC 2 cut(s) 377, 683
GluI GCNGC 6 cut(s) 321, 591, 594, 935, 938, 1043
GsaI CCCAGC 1 cut(s) 1094
GsuI CTGGAG 1 cut(s) 505
HaeII RGCGCY 2 cut(s) 379, 685
HaeIII GGCC 3 cut(s) 539, 596, 937
HapII CCGG 3 cut(s) 102, 137, 491
HgaI GACGC 2 cut(s) 94, 888
HhaI GCGC 2 cut(s) 378, 684
Hin1I GRCGYC 1 cut(s) 105
Hin1II CATG 4 cut(s) 124, 311, 530, 1049
Hin6I GCGC 2 cut(s) 376, 682
HinP1I GCGC 2 cut(s) 376, 682
HinfI GANTC 5 cut(s) 25, 53, 574, 733, 1022
HpaII CCGG 3 cut(s) 102, 137, 491
HphI GGTGA 2 cut(s) 20, 1211
Hpy166II GTNNAC 5 cut(s) 49, 133, 965, 1114, 1168
Hpy188I TCNGA 7 cut(s) 15, 241, 258, 460, 584, 844, 1364
Hpy188III TCNNGA 3 cut(s) 403, 823, 1079
Hpy8I GTNNAC 5 cut(s) 49, 133, 965, 1114, 1168
Hpy99I CGWCG 2 cut(s) 110, 159
HpyAV CCTTC 5 cut(s) 253, 455, 939, 1047, 1067
HpyCH4III ACNGT 2 cut(s) 1321, 1389
HpyCH4IV ACGT 4 cut(s) 67, 157, 480, 961
HpyCH4V TGCA 8 cut(s) 216, 283, 330, 384, 655, 777, 875, 1045
HpyF10VI GCNNNNNNNGC 3 cut(s) 218, 426, 1007
HpyF3I CTNAG 1 cut(s) 372
HpySE526I ACGT 4 cut(s) 67, 157, 480, 961
Hsp92I GRCGYC 1 cut(s) 105
Hsp92II CATG 4 cut(s) 124, 311, 530, 1049
HspAI GCGC 2 cut(s) 376, 682
Ksp22I TGATCA 1 cut(s) 1081
Kzo9I GATC 6 cut(s) 70, 405, 667, 925, 1081, 1159
LmnI GCTCC 4 cut(s) 177, 204, 405, 524
Lsp1109I GCAGC 3 cut(s) 307, 602, 1029
LweI GCATC 2 cut(s) 835, 1174
MaeI CTAG 5 cut(s) 222, 426, 884, 1239, 1405
MaeII ACGT 4 cut(s) 67, 157, 480, 961
MaeIII GTNAC 1 cut(s) 1321
MalI GATC 6 cut(s) 72, 407, 669, 927, 1083, 1161
MboI GATC 6 cut(s) 70, 405, 667, 925, 1081, 1159
MboII GAAGA 4 cut(s) 245, 688, 1291, 1391
MflI RGATCY 1 cut(s) 1159
MhlI GDGCHC 1 cut(s) 174
MlsI TGGCCA 1 cut(s) 539
MluNI TGGCCA 1 cut(s) 539
MlyI GAGTC 1 cut(s) 62
MmeI TCCRAC 2 cut(s) 859, 1387
MnlI CCTC 9 cut(s) 121, 186, 424, 501, 618, 993, 1146, 1347, 1347
Mox20I TGGCCA 1 cut(s) 539
MroXI GAANNNNTTC 1 cut(s) 578
MscI TGGCCA 1 cut(s) 539
MseI TTAA 2 cut(s) 192, 792
MslI CAYNNNNRTG 2 cut(s) 744, 861
Msp20I TGGCCA 1 cut(s) 539
MspA1I CMGCKG 1 cut(s) 593
MspI CCGG 3 cut(s) 102, 137, 491
MspR9I CCNGG 2 cut(s) 137, 665
MvaI CCWGG 1 cut(s) 665
MvnI CGCG 1 cut(s) 934
MwoI GCNNNNNNNGC 3 cut(s) 218, 426, 1007
NciI CCSGG 1 cut(s) 137
NcoI CCATGG 1 cut(s) 526
NdeII GATC 6 cut(s) 70, 405, 667, 925, 1081, 1159
NlaIII CATG 4 cut(s) 124, 311, 530, 1049
NlaIV GGNNCC 4 cut(s) 495, 520, 1144, 1244
NmuCI GTSAC 1 cut(s) 1321
NotI GCGGCCGC 1 cut(s) 935
NspI RCATGY 1 cut(s) 1049
NspV TTCGAA 2 cut(s) 294, 1051
PcsI WCGNNNNNNNCGW 1 cut(s) 57
PdmI GAANNNNTTC 1 cut(s) 578
PfeI GAWTC 4 cut(s) 25, 574, 733, 1022
PfoI TCCNGGA 1 cut(s) 663
PinAI ACCGGT 1 cut(s) 490
PkrI GCNGC 6 cut(s) 322, 592, 595, 936, 939, 1044
PleI GAGTC 1 cut(s) 61
PpsI GAGTC 1 cut(s) 61
PpuMI RGGWCCY 1 cut(s) 1143
PshAI GACNNNNGTC 1 cut(s) 818
Psp124BI GAGCTC 1 cut(s) 174
Psp1406I AACGTT 1 cut(s) 480
Psp5II RGGWCCY 1 cut(s) 1143
Psp6I CCWGG 1 cut(s) 663
PspFI CCCAGC 1 cut(s) 1090
PspGI CCWGG 1 cut(s) 663
PspN4I GGNNCC 4 cut(s) 495, 520, 1144, 1244
PspPI GGNCC 2 cut(s) 130, 1143
PspPPI RGGWCCY 1 cut(s) 1143
PstNI CAGNNNCTG 1 cut(s) 1162
PsuI RGATCY 1 cut(s) 1159
RsaI GTAC 1 cut(s) 1358
RsaNI GTAC 1 cut(s) 1357
RseI CAYNNNNRTG 2 cut(s) 744, 861
SacI GAGCTC 1 cut(s) 174
SaqAI TTAA 2 cut(s) 192, 792
SatI GCNGC 6 cut(s) 321, 591, 594, 935, 938, 1043
Sau3AI GATC 6 cut(s) 70, 405, 667, 925, 1081, 1159
Sau96I GGNCC 2 cut(s) 130, 1143
SchI GAGTC 1 cut(s) 62
ScrFI CCNGG 2 cut(s) 137, 665
SduI GDGCHC 1 cut(s) 174
SfaNI GCATC 2 cut(s) 835, 1174
SfuI TTCGAA 2 cut(s) 294, 1051
SinI GGWCC 2 cut(s) 130, 1143
SmiMI CAYNNNNRTG 2 cut(s) 744, 861
SmlI CTYRAG 1 cut(s) 125
SmoI CTYRAG 1 cut(s) 125
SsiI CCGC 6 cut(s) 418, 593, 737, 934, 938, 1368
SspMI CTAG 5 cut(s) 222, 426, 884, 1239, 1405
SstI GAGCTC 1 cut(s) 174
StyD4I CCNGG 2 cut(s) 135, 663
StyI CCWWGG 2 cut(s) 526, 1238
TaaI ACNGT 2 cut(s) 1321, 1389
TaiI ACGT 4 cut(s) 70, 160, 483, 964
TaqI TCGA 4 cut(s) 108, 294, 822, 1051
TaqII GACCGA 1 cut(s) 31
TauI GCSGC 3 cut(s) 596, 937, 940
TfiI GAWTC 4 cut(s) 25, 574, 733, 1022
Tru1I TTAA 2 cut(s) 192, 792
Tru9I TTAA 2 cut(s) 192, 792
TscAI CASTG 1 cut(s) 1354
TseFI GTSAC 1 cut(s) 1321
TseI GCWGC 3 cut(s) 320, 590, 1042
Tsp45I GTSAC 1 cut(s) 1321
TspDTI ATGAA 4 cut(s) 449, 590, 778, 879
TspRI CASTG 1 cut(s) 1354
VpaK11BI GGWCC 2 cut(s) 130, 1143
XagI CCTNNNNNAGG 1 cut(s) 1150
XapI RAATTY 5 cut(s) 111, 553, 867, 1231, 1252
XceI RCATGY 1 cut(s) 1049
XmaJI CCTAGG 1 cut(s) 1238
XmiI GTMKAC 2 cut(s) 1113, 1167
XmnI GAANNNNTTC 1 cut(s) 578
XspI CTAG 5 cut(s) 222, 426, 884, 1239, 1405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.