RchiOBHm_Chr4g0409301

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000236
Physical Location & Seq
Forward (+)
32675647 .. 32678482
2836 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38034

Sequence Viewer

Length: 1848 bp
ATGCCTTTAATATCTTCAGACCATTCATTGTTTATAAATTGTGGTGGTGGAGAAACATTTGACATCGTTGATGGAAATGTTTATGATCAAGATAATGATACATCGCAGTTTTACCTGAGTCCAAAAGGAAACTGGGCTCGGAGTAGTGCTGGAAGCACCGTCGACCAAAACGATGTTTCCAATTCTAGTATGTACTTAAAAAGCGTGAGATGTGGACTTTCCTCAGAAGCACCTTTATACGATAGAGCTCGCACTTCTCCTGTCTCTCTAAAATATTACGGATTCTGTTTACGTGGAGGAAAATACAGTGTGACACTTCACTTTGCTGAAATCATTGAGGAGGAGGATAATGATTACAGAAGTACAAATAAACGCGTATTTGATGTATACATTCAGGGTGAGAGGAAACTAAAGGATTTCAACATTATGGACAAGGCAGGAGGTCCGAATAACGTATATCAAGAAAATTTCACGGCTGTTAATGTAAATGATAGTACATTAGAGATCCACTTCTACTCGGCTGGAGAAGGGCTTGATCAGGGACCTCTCATATCTGCTATATCCGTAACTCCAGAAATAGATATAGGTCTAGAAAAGCCCGTCACCCTCAAACAATTAAAAGATGCTACTCGGAATTTTAGCCAGAGGAACGAGATTGGTCAAGGGGGTTTTGGAACCGTTTACAAGGCTGAAGTGCAAGGGAAAATTGTAGCTGTGAAAAAACTTTCCTCTCATTCAGAGGAAAGGATCATTCAATTGAAAAATGAGTTTTATAACTTAAAATCAATGAGTCAAGAGAACCTTGTTCAGTTGCTGGACGTTTACAACACAAAAGGCCTGCATTTGCTCATCTATGAATATATGCAAAATAAGTCCCTTGCACACGCCTTATTTGACCCAAAGTCCAAACTGAAACTTGATTGGGAAGCTAGGTTTAACATTTGCTTGGGAATAGCTAGGGGATTGGTGTATCTACATGAGCATCCCAGGCTGAAGATGGTTCACAGGGACATTAAATCAGCTAATATTCTTCTCGATGGAAACCTCAAGGCTAAAATATCAGACTTTGGATTGGCAAGCCTTTACACCGAAGATGATCAATTCAGGTTCATCAAAGTAGAAATGCCTGAGGGATATATGGCACCTGAGTATGTTCGAGGAGTTGTGACATCCAAAGCTGATGTCTACAGTTTTGGGGTGGTTATACTTGAAACTGTTAGTGGAAGGAAAAATGCAGGACACAAGCGAGATGGCCAGGAAACTGAATTTCTTTTAGACACGGCTTGTGATTTACAGCGAAAAGGAAAGCTGGTGGACTTGGTTGATAAAACCTTGTCTAATAAGTATGATGCAAAACAAGCCATCATCATCTTGAATTTAGCAGTAAAGTGCATCAATATATCGCCAACTCTGAGGCCTACCATGTCTGAAGTTGTGAGTGTTCTCGTTGGCGACAAAAAAATTGAGGATATTTGTTCCTCTGCTTTGATTGAGGACATCAACGACCCCCATGTGAAGGAGATCGCGGAGTTCGCGGTGTCGGAGTACAACAAGAAATCCGGGAAGAAGCTGGAGTTACAGAGCGTGGTGAAGGGTGAGACTCAAGTCGTCCCCGGCGAGAATTACCAACTCGTCATCGCCGTCACAGATAACTCATCGGTGGCCAAGTATGAGAGCGTTGTGTATGAGAGGATTTGGGAACATACTAGGGAATTGCTCTCCTTCAATAGTCACAATGCTCAAGTTGACTTCTCTGTTTCTATGGAAGTAACCTCAAGAGTATCCACATCATCCAATTTGATCAAAGGGGAAGATGAAACAGAACACATTTCTGAGTGTACCCCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 Malectin Pkinase Pkinase_Tyr

Protein Analysis

615

Amino Acids

68.85

Weight (kDa)

5.48

Isoelectric Point (pI)

40.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 9 - 187 3.4e-30 Malectin domain
Pkinase PF00069 214 - 479 1.4e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 215 - 482 2.1e-42 Protein tyrosine and serine/threonine kinase
SQAPI PF16845 497 - 576 6.8e-30 Aspartic acid proteinase inhibitor
Cystatin PF00031 497 - 564 3.2e-13 Cystatin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 35, 774
AccB1I GGYRCC 1 cut(s) 1141
AccI GTMKAC 3 cut(s) 162, 387, 1185
AccII CGCG 3 cut(s) 375, 1526, 1535
AciI CCGC 2 cut(s) 1526, 1535
AclWI GGATC 2 cut(s) 499, 755
AcoI YGGCCR 2 cut(s) 1252, 1662
AcsI RAATTY 4 cut(s) 466, 634, 1265, 1375
AcuI CTGAAG 3 cut(s) 711, 1013, 1449
AfaI GTAC 5 cut(s) 194, 364, 496, 1547, 1840
AfiI CCNNNNNNNGG 1 cut(s) 1516
AflIII ACRYGT 1 cut(s) 373
AgsI TTSAA 6 cut(s) 421, 755, 760, 1211, 1375, 1726
AhdI GACNNNNNGTC 1 cut(s) 901
AjnI CCWGG 2 cut(s) 986, 1254
AluBI AGCT 8 cut(s) 248, 713, 929, 956, 1022, 1178, 1309, 1570
AluI AGCT 8 cut(s) 248, 713, 929, 956, 1022, 1178, 1309, 1570
Alw21I GWGCWC 1 cut(s) 250
Alw26I GTCTC 2 cut(s) 268, 1592
AlwI GGATC 2 cut(s) 499, 755
AlwNI CAGNNNCTG 1 cut(s) 814
AoxI GGCC 4 cut(s) 835, 1252, 1415, 1662
ApoI RAATTY 4 cut(s) 466, 634, 1265, 1375
ArsI GACNNNNNNTTYG 2 cut(s) 1167, 1199
AspS9I GGNCC 2 cut(s) 443, 542
AsuC2I CCSGG 2 cut(s) 1561, 1614
AsuHPI GGTGA 4 cut(s) 410, 595, 1600, 1607
AvaII GGWCC 2 cut(s) 443, 542
AxyI CCTNAGG 1 cut(s) 1128
BalI TGGCCA 2 cut(s) 1254, 1664
BanI GGYRCC 1 cut(s) 1141
BanII GRGCYC 2 cut(s) 139, 250
Bbv12I GWGCWC 1 cut(s) 250
BccI CCATC 5 cut(s) 65, 991, 1031, 1244, 1370
BceAI ACGGC 3 cut(s) 489, 1296, 1625
BciT130I CCWGG 2 cut(s) 988, 1256
BciVI GTATCC 1 cut(s) 1792
BclI TGATCA 4 cut(s) 85, 535, 1096, 1800
BcnI CCSGG 2 cut(s) 1561, 1614
BcoDI GTCTC 2 cut(s) 268, 1592
BfaI CTAG 6 cut(s) 186, 590, 930, 957, 1707, 1846
BfmI CTRYAG 1 cut(s) 1186
BfuI GTATCC 1 cut(s) 1792
Bme1390I CCNGG 4 cut(s) 988, 1256, 1561, 1614
Bme18I GGWCC 2 cut(s) 443, 542
BmeRI GACNNNNNGTC 1 cut(s) 901
BmgT120I GGNCC 2 cut(s) 443, 542
BmiI GGNNCC 3 cut(s) 543, 676, 1143
BmrFI CCNGG 4 cut(s) 988, 1256, 1561, 1614
BmrI ACTGGG 1 cut(s) 142
BmsI GCATC 4 cut(s) 613, 991, 1339, 1401
BmuI ACTGGG 1 cut(s) 142
BoxI GACNNNNGTC 1 cut(s) 1604
BpmI CTGGAG 3 cut(s) 543, 555, 1592
BpuEI CTTGAG 4 cut(s) 1031, 1587, 1725, 1759
BpuMI CCSGG 2 cut(s) 1561, 1614
BsaAI YACGTR 1 cut(s) 293
BsaJI CCNNGG 2 cut(s) 986, 1612
Bsc4I CCNNNNNNNGG 1 cut(s) 1516
Bse1I ACTGG 1 cut(s) 137
Bse21I CCTNAGG 1 cut(s) 1128
BseBI CCWGG 2 cut(s) 988, 1256
BseDI CCNNGG 2 cut(s) 986, 1612
BseGI GGATG 3 cut(s) 982, 1169, 1790
BseLI CCNNNNNNNGG 1 cut(s) 1516
BseMII CTCAG 6 cut(s) 107, 237, 1119, 1137, 1403, 1824
BseNI ACTGG 1 cut(s) 137
BseRI GAGGAG 3 cut(s) 353, 356, 1173
Bsh1236I CGCG 3 cut(s) 375, 1526, 1535
BshFI GGCC 4 cut(s) 837, 1254, 1417, 1664
BshNI GGYRCC 1 cut(s) 1141
BsiHKAI GWGCWC 1 cut(s) 250
BsiSI CCGG 2 cut(s) 1560, 1614
BslFI GGGAC 4 cut(s) 555, 859, 1022, 1595
BslI CCNNNNNNNGG 1 cut(s) 1516
BsmAI GTCTC 2 cut(s) 268, 1592
BsmFI GGGAC 4 cut(s) 555, 859, 1022, 1595
BsnI GGCC 4 cut(s) 837, 1254, 1417, 1664
Bsp1286I GDGCHC 2 cut(s) 139, 250
Bsp143I GATC 7 cut(s) 85, 504, 535, 747, 1096, 1521, 1800
BspACI CCGC 2 cut(s) 1526, 1535
BspANI GGCC 4 cut(s) 837, 1254, 1417, 1664
BspCNI CTCAG 6 cut(s) 108, 236, 1120, 1138, 1404, 1825
BspFNI CGCG 3 cut(s) 375, 1526, 1535
BspLI GGNNCC 3 cut(s) 543, 676, 1143
BspPI GGATC 2 cut(s) 499, 755
BspT107I GGYRCC 1 cut(s) 1141
BsrI ACTGG 1 cut(s) 137
BssECI CCNNGG 2 cut(s) 986, 1612
BssMI GATC 7 cut(s) 85, 504, 535, 747, 1096, 1521, 1800
BssNAI GTATAC 1 cut(s) 388
Bst1107I GTATAC 1 cut(s) 388
Bst2UI CCWGG 2 cut(s) 988, 1256
Bst4CI ACNGT 5 cut(s) 160, 308, 679, 1190, 1216
BstBAI YACGTR 1 cut(s) 293
BstC8I GCNNGC 3 cut(s) 250, 839, 1078
BstDEI CTNAG 6 cut(s) 116, 223, 1128, 1146, 1412, 1833
BstF5I GGATG 3 cut(s) 982, 1169, 1790
BstFNI CGCG 3 cut(s) 375, 1526, 1535
BstKTI GATC 7 cut(s) 88, 507, 538, 750, 1099, 1524, 1803
BstMAI GTCTC 2 cut(s) 268, 1592
BstMBI GATC 7 cut(s) 85, 504, 535, 747, 1096, 1521, 1800
BstMWI GCNNNNNNNGC 3 cut(s) 988, 1358, 1532
BstNI CCWGG 2 cut(s) 988, 1256
BstPAI GACNNNNGTC 1 cut(s) 1604
BstSCI CCNGG 4 cut(s) 986, 1254, 1559, 1612
BstSFI CTRYAG 1 cut(s) 1186
BstUI CGCG 3 cut(s) 375, 1526, 1535
BstX2I RGATCY 1 cut(s) 504
BstYI RGATCY 1 cut(s) 504
BstZ17I GTATAC 1 cut(s) 388
Bsu36I CCTNAGG 1 cut(s) 1128
BsuI GTATCC 1 cut(s) 1792
BsuRI GGCC 4 cut(s) 837, 1254, 1417, 1664
BtgZI GCGATG 2 cut(s) 87, 1621
BtsCI GGATG 3 cut(s) 982, 1169, 1790
BtsIMutI CAGTG 1 cut(s) 313
Cac8I GCNNGC 3 cut(s) 250, 839, 1078
CaiI CAGNNNCTG 1 cut(s) 814
Cfr13I GGNCC 2 cut(s) 443, 542
Csp6I GTAC 5 cut(s) 193, 363, 495, 1546, 1839
CviAII CATG 3 cut(s) 977, 1423, 1511
CviQI GTAC 5 cut(s) 193, 363, 495, 1546, 1839
DdeI CTNAG 6 cut(s) 116, 223, 1128, 1146, 1412, 1833
DpnI GATC 7 cut(s) 87, 506, 537, 749, 1098, 1523, 1802
DpnII GATC 7 cut(s) 85, 504, 535, 747, 1096, 1521, 1800
DriI GACNNNNNGTC 1 cut(s) 901
EaeI YGGCCR 2 cut(s) 1252, 1662
Eam1105I GACNNNNNGTC 1 cut(s) 901
Ecl136II GAGCTC 1 cut(s) 248
Eco147I AGGCCT 2 cut(s) 837, 1417
Eco24I GRGCYC 2 cut(s) 139, 250
Eco47I GGWCC 2 cut(s) 443, 542
Eco53kI GAGCTC 1 cut(s) 248
Eco57I CTGAAG 3 cut(s) 711, 1013, 1449
Eco81I CCTNAGG 1 cut(s) 1128
EcoICRI GAGCTC 1 cut(s) 248
EcoO109I RGGNCCY 1 cut(s) 542
EcoRII CCWGG 2 cut(s) 986, 1254
EcoT38I GRGCYC 2 cut(s) 139, 250
FaeI CATG 3 cut(s) 980, 1426, 1514
FalI AAGNNNNNCTT 2 cut(s) 786, 818
FaqI GGGAC 4 cut(s) 555, 859, 1022, 1595
FatI CATG 3 cut(s) 976, 1422, 1510
FbaI TGATCA 4 cut(s) 85, 535, 1096, 1800
FblI GTMKAC 3 cut(s) 162, 387, 1185
FokI GGATG 3 cut(s) 969, 1156, 1777
FriOI GRGCYC 2 cut(s) 139, 250
FspBI CTAG 6 cut(s) 186, 590, 930, 957, 1707, 1846
GsuI CTGGAG 3 cut(s) 543, 555, 1592
HaeIII GGCC 4 cut(s) 837, 1254, 1417, 1664
HapII CCGG 2 cut(s) 1560, 1614
Hin1II CATG 3 cut(s) 980, 1426, 1514
HincII GTYRAC 2 cut(s) 163, 1747
HindII GTYRAC 2 cut(s) 163, 1747
HinfI GANTC 4 cut(s) 118, 282, 790, 1600
HpaII CCGG 2 cut(s) 1560, 1614
HphI GGTGA 4 cut(s) 410, 595, 1600, 1607
Hpy188III TCNNGA 8 cut(s) 89, 461, 572, 590, 794, 1034, 1372, 1776
Hpy99I CGWCG 1 cut(s) 164
HpyAV CCTTC 5 cut(s) 521, 1218, 1510, 1585, 1732
HpyCH4III ACNGT 5 cut(s) 160, 308, 679, 1190, 1216
HpyCH4IV ACGT 3 cut(s) 292, 453, 819
HpyCH4V TGCA 7 cut(s) 697, 841, 865, 881, 1235, 1352, 1392
HpyF10VI GCNNNNNNNGC 3 cut(s) 988, 1358, 1532
HpyF3I CTNAG 6 cut(s) 116, 223, 1128, 1146, 1412, 1833
HpySE526I ACGT 3 cut(s) 292, 453, 819
Hsp92II CATG 3 cut(s) 980, 1426, 1514
Ksp22I TGATCA 4 cut(s) 85, 535, 1096, 1800
Kzo9I GATC 7 cut(s) 85, 504, 535, 747, 1096, 1521, 1800
LweI GCATC 4 cut(s) 613, 991, 1339, 1401
MaeI CTAG 6 cut(s) 186, 590, 930, 957, 1707, 1846
MaeII ACGT 3 cut(s) 292, 453, 819
MaeIII GTNAC 8 cut(s) 310, 565, 601, 1165, 1575, 1642, 1730, 1768
MalI GATC 7 cut(s) 87, 506, 537, 749, 1098, 1523, 1802
MboI GATC 7 cut(s) 85, 504, 535, 747, 1096, 1521, 1800
MboII GAAGA 6 cut(s) 6, 1006, 1022, 1103, 1576, 1823
MfeI CAATTG 1 cut(s) 755
MflI RGATCY 1 cut(s) 504
MhlI GDGCHC 2 cut(s) 139, 250
MlsI TGGCCA 2 cut(s) 1254, 1664
MluI ACGCGT 1 cut(s) 373
MluNI TGGCCA 2 cut(s) 1254, 1664
MlyI GAGTC 3 cut(s) 127, 799, 1594
MmeI TCCRAC 1 cut(s) 1521
Mox20I TGGCCA 2 cut(s) 1254, 1664
MscI TGGCCA 2 cut(s) 1254, 1664
MseI TTAA 7 cut(s) 8, 197, 480, 617, 779, 936, 1014
Msp20I TGGCCA 2 cut(s) 1254, 1664
MspI CCGG 2 cut(s) 1560, 1614
MspR9I CCNGG 4 cut(s) 988, 1256, 1561, 1614
MunI CAATTG 1 cut(s) 755
MvaI CCWGG 2 cut(s) 988, 1256
MvnI CGCG 3 cut(s) 375, 1526, 1535
MwoI GCNNNNNNNGC 3 cut(s) 988, 1358, 1532
NciI CCSGG 2 cut(s) 1561, 1614
NdeII GATC 7 cut(s) 85, 504, 535, 747, 1096, 1521, 1800
NlaIII CATG 3 cut(s) 980, 1426, 1514
NlaIV GGNNCC 3 cut(s) 543, 676, 1143
NmeAIII GCCGAG 1 cut(s) 497
NmuCI GTSAC 5 cut(s) 310, 601, 1165, 1642, 1730
PceI AGGCCT 2 cut(s) 837, 1417
PcsI WCGNNNNNNNCGW 3 cut(s) 168, 1614, 1638
PfeI GAWTC 1 cut(s) 282
PfoI TCCNGGA 1 cut(s) 1559
PleI GAGTC 3 cut(s) 126, 798, 1594
PpsI GAGTC 3 cut(s) 126, 798, 1594
Ppu21I YACGTR 1 cut(s) 293
PpuMI RGGWCCY 1 cut(s) 542
PshAI GACNNNNGTC 1 cut(s) 1604
PsiI TTATAA 2 cut(s) 35, 774
Psp124BI GAGCTC 1 cut(s) 250
Psp5II RGGWCCY 1 cut(s) 542
Psp6I CCWGG 2 cut(s) 986, 1254
PspGI CCWGG 2 cut(s) 986, 1254
PspN4I GGNNCC 3 cut(s) 543, 676, 1143
PspPI GGNCC 2 cut(s) 443, 542
PspPPI RGGWCCY 1 cut(s) 542
PstNI CAGNNNCTG 1 cut(s) 814
PsuI RGATCY 1 cut(s) 504
RsaI GTAC 5 cut(s) 194, 364, 496, 1547, 1840
RsaNI GTAC 5 cut(s) 193, 363, 495, 1546, 1839
SacI GAGCTC 1 cut(s) 250
SalI GTCGAC 1 cut(s) 161
SaqAI TTAA 7 cut(s) 8, 197, 480, 617, 779, 936, 1014
Sau3AI GATC 7 cut(s) 85, 504, 535, 747, 1096, 1521, 1800
Sau96I GGNCC 2 cut(s) 443, 542
SchI GAGTC 3 cut(s) 127, 799, 1594
ScrFI CCNGG 4 cut(s) 988, 1256, 1561, 1614
SduI GDGCHC 2 cut(s) 139, 250
SfaNI GCATC 4 cut(s) 613, 991, 1339, 1401
SfcI CTRYAG 1 cut(s) 1186
SinI GGWCC 2 cut(s) 443, 542
SmlI CTYRAG 4 cut(s) 1046, 1602, 1740, 1774
SmoI CTYRAG 4 cut(s) 1046, 1602, 1740, 1774
SseBI AGGCCT 2 cut(s) 837, 1417
SsiI CCGC 2 cut(s) 1526, 1535
SspI AATATT 2 cut(s) 275, 1027
SspMI CTAG 6 cut(s) 186, 590, 930, 957, 1707, 1846
SstI GAGCTC 1 cut(s) 250
StuI AGGCCT 2 cut(s) 837, 1417
StyD4I CCNGG 4 cut(s) 986, 1254, 1559, 1612
TaaI ACNGT 5 cut(s) 160, 308, 679, 1190, 1216
TaiI ACGT 3 cut(s) 295, 456, 822
TaqI TCGA 3 cut(s) 162, 1035, 1156
TatI WGTACW 4 cut(s) 192, 362, 494, 1545
TfiI GAWTC 1 cut(s) 282
Tru1I TTAA 7 cut(s) 8, 197, 480, 617, 779, 936, 1014
Tru9I TTAA 7 cut(s) 8, 197, 480, 617, 779, 936, 1014
TscAI CASTG 1 cut(s) 313
TseFI GTSAC 5 cut(s) 310, 601, 1165, 1642, 1730
Tsp45I GTSAC 5 cut(s) 310, 601, 1165, 1642, 1730
TspDTI ATGAA 4 cut(s) 15, 870, 1099, 1830
TspGWI ACGGA 2 cut(s) 294, 553
TspRI CASTG 1 cut(s) 313
VpaK11BI GGWCC 2 cut(s) 443, 542
XapI RAATTY 4 cut(s) 466, 634, 1265, 1375
XbaI TCTAGA 1 cut(s) 589
XcmI CCANNNNNNNNNTGG 2 cut(s) 129, 994
XmiI GTMKAC 3 cut(s) 162, 387, 1185
XspI CTAG 6 cut(s) 186, 590, 930, 957, 1707, 1846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.