Rh4DG148200

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
29643730 .. 29658891
15162 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG148200.1

Sequence Viewer

Length: 2676 bp
ATGGGTACTGAAGCTTCATTAAGACTTGTTAGTAAACTTATAATTCTATGCCTCATCTTTACTCTTTGGCAGCTTGGCTCTGAATTCAAATATCAGAGTACAGCTCAACCATTGCCCGATGAAGAAGTGAGAGCTCTTAATGAAATAGCATATAAGTTGGAGTTAAAAGGACGAATGTTCTATGAAGGCTCACTTTGCAATGGAAGCGGCGATGTTGGCGTCTACTGTGACTGCAGTTCCGGCACCATTTGCCACGTCACATATATTGAGCTAACTGCTAGGGGTTTGTCTGGAGTTATACCTGAAGAATTTGCCAATCTCACATATCTGCAAAGCTTGTTTCTCGATAATAATCAATTGACAGGTCCCATACCTGCTAGCTTGGGGAAATTATCTTTGCTCTACAGGCTGGATCTTTCCAATAATCAATTGACCGGGTCCATTCCAGCGAGTTTGGGAAATATGAAGTTTCAAGCATTATTGTTCGACCATCAATTTCTGAATCCTTCTTCTCATCGCCGCGTGGATATTGAATTCACACTGGATCTTTCAGACAATCAATTGAGTGGATCCATACCAGCCACTTTAGGGAATTTGGCCCTCTCTTTGGTGATATCTGATCCAGAAGCCTACCGACTCGTCAAGCTTAAGCAATATGACAGTGCTTATGTAATGTCATCGTTCTACCTGAGTCTTTCAAACAATCAACTGACTGGGCCTATACCAAAGAGCTTAGGGAATTTGATTTTCGCCGATACTATTGATCTGCATGGCAACTTTCTCAACGCCTCTATACCAGCATCTTTGGGGGCGGTGACTTTTCTTAAGTCTCTGCATTTGCATAACAATGGAATCTCTGGTACTCTTCCACAAACGCTTGGAAATTTAACACGCCTTATAGTCTTCACGCTCGGATCCAACAGTATCACTGGGACATTACCAAAAAGTTTTGTCAACCTTACAAGTCTGGAAACATTTTCTGTAGCTGGTAACGATTTGTCTGGCCCTCTACCTGACTTCATAGCCAACTGGACTTCAAGCACTGAACTTTATCTCAACGGAAACAATTTCCACGGGAAGATACCTACCGGAATTTTTAATTTATCATATCTAGAAATTTTGGCAATAAGTGATGTGGGAGACTCTCATTTCCAGTTCCCACCATCTACACAAGTGACGAGCAGCTTTCGTATTTTGATACTGAGAAACTGCTCGATCACAGGTCAAATTCCTTATTACATTGGAAATATGTCATCATTATCAAACCTAGACCTGAGCTTCAACAGCTTAACGGGTAGTATCCCAGATTCTTTGAAAAACTTAGATTTAAGTTACTTGTCCTTTTCAAATAATATGCTTACTGGGGAAGTTCCTAATTGGATTCAAAATGCAGTTTGGAGTAAGATGGATCTTTCATACAATAATTTTTCAAAACTTACCTTTAAACCGTCAACCAAGTTAGACTTGAATTTGTTTTCCTGTTGCTGCAACTCCTCAACATGTCTACCGGATACGATGGACCCAACTCGAATAAAGGAAAAGTATTGTCCCCCGGAAAAACCTAATTACCATTCATTGTTTATAAATTGTGGTGGTGGGGAAACATTTGACATCGTTGATGGAAATGTTTATGATCAAGATAATGATACATCGCAGTTTTACCTGAGTCCAAAAGGAAATTGGGCTCGGAGTAGTGCTGGAAGCACCGTCGACCAAAACTATGCTTCCAATTCTAGTATATTCTTAAAAAGCGTGAGATGTGGGCTTTCCTCTGAAGCACATTTATATGATAGAGCTCGCACTTCTCCTGTCTCTCTAAAATATTACGGATTCTGTTTACGTGGAGGAAAATACAGTGTGACACTTCACTTTGCTGAAATCATTGATGAGGATAATGATCACAGAAGTACAAATAAACGCGTATTTGATGTATACATTCAGGGTGAGAGGAAACTAAAGGATTTCAACATTATGGACAAGGCAGGAGGTCCGAATAACGTATATCAAGAAAATTTCACGGCTGTTAATGTAAATGATAGTACATTAGAGATCCACTTCTACTCGGCTGGAGAAGGGCTTGATCAGGGACCTCTCATATCTGCTATATCCGCTTGTGATTTACAGCGAAAAGGAAAGCTGGTGGACTTGGTTGATAAAACCTTGTCTAATAAGTATGATGCAAAACAAGCCATCATCATCTTGAATTTAGCAGTAAAGTGCATCAATATATCGCCAACTCTGAGGCCTACTATGTCTGAAGTTGTGAGTGTTCTCGTTGGCGACAAAAAAATTGAGGAGATTTGTTCCTCTGCTTTGATTGAGGACATCAACGACCCCCATGTGAAGGAGATCGCGGAGTTCGCGGTGTCGGAGTACAACAAGAAATCCGGGAAGAAGCTGGAGTTACAGAGCGTGGTGAAGGGTGAGACTCAAGTCGTCCCCGGTGAGAATTACCAGCTCGTCATCGCCGTCACTGATAACTCATCGGTGGCCAAATACGAGAGCGTTGTGTATGAGAGGATTTGGGAACATACTAGGGAATTGCTCTCCTTCAATAGTCACAATGCTCAAGTTGACTCCTCTGTTTCTATGGAAGTAACCTCAAGAGTATCCACATCATCCAATTTGATCAAAGGGGAAGATGAAACAGAACACATTTCTGAGTGTACCCCCTAG

Protein Analysis

891

Amino Acids

98.13

Weight (kDa)

5.18

Isoelectric Point (pI)

33.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 85 - 144 6.1e-07 Leucine rich repeat
LRR_8 PF13855 275 - 333 1e-08 Leucine rich repeat
Malectin PF11721 525 - 702 3.5e-30 Malectin domain
SQAPI PF16845 773 - 852 1.1e-29 Aspartic acid proteinase inhibitor
Cystatin PF00031 773 - 840 5e-13 Cystatin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 41, 1583
Acc36I ACCTGC 1 cut(s) 382
AccB1I GGYRCC 1 cut(s) 242
AccI GTMKAC 4 cut(s) 222, 1504, 1710, 1932
AccII CGCG 4 cut(s) 522, 1920, 2354, 2363
AciI CCGC 6 cut(s) 207, 520, 812, 2109, 2354, 2363
AclWI GGATC 9 cut(s) 420, 552, 564, 577, 614, 909, 922, 1416, 2044
AcoI YGGCCR 1 cut(s) 2490
AcuI CTGAAG 4 cut(s) 30, 324, 1794, 2277
AcyI GRCGYC 1 cut(s) 219
AfaI GTAC 7 cut(s) 7, 100, 862, 1909, 2041, 2375, 2668
AfiI CCNNNNNNNGG 3 cut(s) 588, 607, 2344
AflII CTTAAG 2 cut(s) 647, 824
AflIII ACRYGT 2 cut(s) 1499, 1918
AjiI CACGTC 1 cut(s) 256
Alw21I GWGCWC 2 cut(s) 136, 1798
Alw26I GTCTC 4 cut(s) 834, 1134, 1816, 2420
AlwI GGATC 9 cut(s) 420, 552, 564, 577, 614, 909, 922, 1416, 2044
AoxI GGCC 5 cut(s) 597, 716, 1003, 2243, 2490
ApeKI GCWGC 3 cut(s) 70, 1182, 1485
AspS9I GGNCC 8 cut(s) 365, 438, 598, 716, 1004, 1519, 1988, 2087
AsuC2I CCSGG 4 cut(s) 436, 1553, 2389, 2442
AsuHPI GGTGA 6 cut(s) 622, 826, 1955, 2428, 2435, 2456
AsuNHI GCTAGC 1 cut(s) 377
AvaII GGWCC 5 cut(s) 365, 438, 1519, 1988, 2087
BalI TGGCCA 1 cut(s) 2492
BamHI GGATCC 2 cut(s) 569, 914
BanI GGYRCC 1 cut(s) 242
BanII GRGCYC 3 cut(s) 136, 1687, 1798
BarI GAAGNNNNNNTAC 1 cut(s) 30
BbsI GAAGAC 1 cut(s) 895
Bbv12I GWGCWC 2 cut(s) 136, 1798
BbvI GCAGC 3 cut(s) 82, 1194, 1472
BccI CCATC 6 cut(s) 498, 1171, 1399, 1510, 1613, 2198
BceAI ACGGC 2 cut(s) 2034, 2453
BciVI GTATCC 3 cut(s) 1310, 1504, 2620
BclI TGATCA 4 cut(s) 1633, 1897, 2080, 2628
BcnI CCSGG 4 cut(s) 436, 1553, 2389, 2442
BcoDI GTCTC 4 cut(s) 834, 1134, 1816, 2420
BfaI CTAG 7 cut(s) 279, 378, 1112, 1268, 1734, 2535, 2674
BfmI CTRYAG 3 cut(s) 232, 403, 981
BfrI CTTAAG 2 cut(s) 647, 824
BfuAI ACCTGC 1 cut(s) 382
BfuI GTATCC 3 cut(s) 1310, 1504, 2620
BisI GCNGC 5 cut(s) 71, 208, 520, 1183, 1486
BlsI GCNGC 5 cut(s) 72, 209, 521, 1184, 1487
Bme1390I CCNGG 4 cut(s) 436, 1553, 2389, 2442
Bme18I GGWCC 5 cut(s) 365, 438, 1519, 1988, 2087
BmgBI CACGTC 1 cut(s) 256
BmgT120I GGNCC 8 cut(s) 365, 438, 598, 716, 1004, 1519, 1988, 2087
BmiI GGNNCC 7 cut(s) 244, 367, 439, 571, 916, 1521, 2088
BmrFI CCNGG 4 cut(s) 436, 1553, 2389, 2442
BmrI ACTGGG 3 cut(s) 723, 939, 1371
BmsI GCATC 3 cut(s) 809, 2167, 2229
BmtI GCTAGC 1 cut(s) 381
BmuI ACTGGG 3 cut(s) 723, 939, 1371
BoxI GACNNNNGTC 1 cut(s) 2432
BpiI GAAGAC 1 cut(s) 895
BplI GAGNNNNNCTC 2 cut(s) 88, 120
BpmI CTGGAG 3 cut(s) 312, 2088, 2420
Bpu10I CCTNAGC 2 cut(s) 733, 1274
BpuEI CTTGAG 3 cut(s) 2415, 2553, 2587
BpuMI CCSGG 4 cut(s) 436, 1553, 2389, 2442
BsaAI YACGTR 1 cut(s) 1841
BsaBI GATNNNNATC 2 cut(s) 351, 1896
BsaHI GRCGYC 1 cut(s) 219
BsaJI CCNNGG 3 cut(s) 1072, 1551, 2440
BsaWI WCCGGW 2 cut(s) 1088, 1507
Bsc4I CCNNNNNNNGG 3 cut(s) 588, 607, 2344
Bse1I ACTGG 6 cut(s) 546, 718, 934, 1034, 1153, 1366
Bse3DI GCAATG 2 cut(s) 110, 205
Bse8I GATNNNNATC 2 cut(s) 351, 1896
BseDI CCNNGG 3 cut(s) 1072, 1551, 2440
BseGI GGATG 1 cut(s) 2618
BseJI GATNNNNATC 2 cut(s) 351, 1896
BseLI CCNNNNNNNGG 3 cut(s) 588, 607, 2344
BseMI GCAATG 2 cut(s) 110, 205
BseMII CTCAG 6 cut(s) 680, 1193, 1265, 1655, 2231, 2652
BseNI ACTGG 6 cut(s) 546, 718, 934, 1034, 1153, 1366
BseRI GAGGAG 3 cut(s) 1483, 2309, 2569
BseXI GCAGC 3 cut(s) 82, 1194, 1472
Bsh1236I CGCG 4 cut(s) 522, 1920, 2354, 2363
BshFI GGCC 5 cut(s) 599, 718, 1005, 2245, 2492
BshNI GGYRCC 1 cut(s) 242
BsiHKAI GWGCWC 2 cut(s) 136, 1798
BsiSI CCGG 7 cut(s) 240, 435, 1089, 1508, 1553, 2388, 2442
BslFI GGGAC 5 cut(s) 351, 946, 1533, 2100, 2423
BslI CCNNNNNNNGG 3 cut(s) 588, 607, 2344
BsmAI GTCTC 4 cut(s) 834, 1134, 1816, 2420
BsmFI GGGAC 5 cut(s) 351, 946, 1533, 2100, 2423
BsnI GGCC 5 cut(s) 599, 718, 1005, 2245, 2492
Bsp1286I GDGCHC 3 cut(s) 136, 1687, 1798
BspACI CCGC 6 cut(s) 207, 520, 812, 2109, 2354, 2363
BspANI GGCC 5 cut(s) 599, 718, 1005, 2245, 2492
BspCNI CTCAG 6 cut(s) 681, 1194, 1266, 1656, 2232, 2653
BspFNI CGCG 4 cut(s) 522, 1920, 2354, 2363
BspLI GGNNCC 7 cut(s) 244, 367, 439, 571, 916, 1521, 2088
BspMAI CTGCAG 1 cut(s) 236
BspMI ACCTGC 1 cut(s) 382
BspOI GCTAGC 1 cut(s) 381
BspPI GGATC 9 cut(s) 420, 552, 564, 577, 614, 909, 922, 1416, 2044
BspT107I GGYRCC 1 cut(s) 242
BspTI CTTAAG 2 cut(s) 647, 824
BsrDI GCAATG 2 cut(s) 110, 205
BsrI ACTGG 6 cut(s) 546, 718, 934, 1034, 1153, 1366
BssECI CCNNGG 3 cut(s) 1072, 1551, 2440
BssNAI GTATAC 1 cut(s) 1933
BssNI GRCGYC 1 cut(s) 219
Bst1107I GTATAC 1 cut(s) 1933
Bst4CI ACNGT 6 cut(s) 227, 662, 923, 1449, 1708, 1856
Bst6I CTCTTC 1 cut(s) 870
BstACI GRCGYC 1 cut(s) 219
BstAFI CTTAAG 2 cut(s) 647, 824
BstAPI GCANNNNNTGC 1 cut(s) 249
BstBAI YACGTR 1 cut(s) 1841
BstC8I GCNNGC 2 cut(s) 379, 1798
BstDEI CTNAG 8 cut(s) 689, 733, 1202, 1274, 1321, 1664, 2240, 2661
BstDSI CCRYGG 1 cut(s) 1072
BstF5I GGATG 1 cut(s) 2618
BstFNI CGCG 4 cut(s) 522, 1920, 2354, 2363
BstMAI GTCTC 4 cut(s) 834, 1134, 1816, 2420
BstNSI RCATGY 1 cut(s) 1503
BstPAI GACNNNNGTC 1 cut(s) 2432
BstSCI CCNGG 4 cut(s) 434, 1551, 2387, 2440
BstSFI CTRYAG 3 cut(s) 232, 403, 981
BstUI CGCG 4 cut(s) 522, 1920, 2354, 2363
BstV1I GCAGC 3 cut(s) 82, 1194, 1472
BstV2I GAAGAC 1 cut(s) 895
BstX2I RGATCY 6 cut(s) 412, 544, 569, 914, 1408, 2049
BstYI RGATCY 6 cut(s) 412, 544, 569, 914, 1408, 2049
BstZ17I GTATAC 1 cut(s) 1933
BsuI GTATCC 3 cut(s) 1310, 1504, 2620
BsuRI GGCC 5 cut(s) 599, 718, 1005, 2245, 2492
BtgI CCRYGG 1 cut(s) 1072
BtgZI GCGATG 4 cut(s) 225, 500, 1635, 2449
BtrI CACGTC 1 cut(s) 256
BtsCI GGATG 1 cut(s) 2618
BtsIMutI CAGTG 6 cut(s) 539, 667, 927, 1041, 1861, 2472
BveI ACCTGC 1 cut(s) 382
Cac8I GCNNGC 2 cut(s) 379, 1798
Cfr13I GGNCC 8 cut(s) 365, 438, 598, 716, 1004, 1519, 1988, 2087
CseI GACGC 1 cut(s) 208
Csp6I GTAC 7 cut(s) 6, 99, 861, 1908, 2040, 2374, 2667
CviAII CATG 3 cut(s) 770, 1500, 2339
CviQI GTAC 7 cut(s) 6, 99, 861, 1908, 2040, 2374, 2667
DdeI CTNAG 8 cut(s) 689, 733, 1202, 1274, 1321, 1664, 2240, 2661
DraI TTTAAA 1 cut(s) 1444
EaeI YGGCCR 1 cut(s) 2490
Eam1104I CTCTTC 1 cut(s) 870
EarI CTCTTC 1 cut(s) 870
Ecl136II GAGCTC 2 cut(s) 134, 1796
Eco147I AGGCCT 1 cut(s) 2245
Eco24I GRGCYC 3 cut(s) 136, 1687, 1798
Eco32I GATATC 1 cut(s) 615
Eco47I GGWCC 5 cut(s) 365, 438, 1519, 1988, 2087
Eco53kI GAGCTC 2 cut(s) 134, 1796
Eco57I CTGAAG 4 cut(s) 30, 324, 1794, 2277
EcoICRI GAGCTC 2 cut(s) 134, 1796
EcoO109I RGGNCCY 2 cut(s) 365, 2087
EcoRI GAATTC 2 cut(s) 83, 533
EcoRV GATATC 1 cut(s) 615
EcoT38I GRGCYC 3 cut(s) 136, 1687, 1798
FaeI CATG 3 cut(s) 773, 1503, 2342
FalI AAGNNNNNCTT 4 cut(s) 177, 209, 1448, 1480
FaqI GGGAC 5 cut(s) 351, 946, 1533, 2100, 2423
FatI CATG 3 cut(s) 769, 1499, 2338
FbaI TGATCA 4 cut(s) 1633, 1897, 2080, 2628
FblI GTMKAC 4 cut(s) 222, 1504, 1710, 1932
Fnu4HI GCNGC 5 cut(s) 71, 208, 520, 1183, 1486
FokI GGATG 1 cut(s) 2605
FriOI GRGCYC 3 cut(s) 136, 1687, 1798
Fsp4HI GCNGC 5 cut(s) 71, 208, 520, 1183, 1486
FspBI CTAG 7 cut(s) 279, 378, 1112, 1268, 1734, 2535, 2674
GluI GCNGC 5 cut(s) 71, 208, 520, 1183, 1486
GsuI CTGGAG 3 cut(s) 312, 2088, 2420
HaeIII GGCC 5 cut(s) 599, 718, 1005, 2245, 2492
HapII CCGG 7 cut(s) 240, 435, 1089, 1508, 1553, 2388, 2442
HgaI GACGC 1 cut(s) 208
Hin1I GRCGYC 1 cut(s) 219
Hin1II CATG 3 cut(s) 773, 1503, 2342
HincII GTYRAC 4 cut(s) 955, 1452, 1711, 2575
HindII GTYRAC 4 cut(s) 955, 1452, 1711, 2575
HindIII AAGCTT 3 cut(s) 12, 334, 644
HpaII CCGG 7 cut(s) 240, 435, 1089, 1508, 1553, 2388, 2442
HphI GGTGA 6 cut(s) 622, 826, 1955, 2428, 2435, 2456
Hpy188III TCNNGA 9 cut(s) 291, 344, 623, 968, 1112, 1637, 2006, 2200, 2604
Hpy99I CGWCG 1 cut(s) 1712
HpyAV CCTTC 6 cut(s) 179, 516, 2066, 2338, 2413, 2560
HpyCH4III ACNGT 6 cut(s) 227, 662, 923, 1449, 1708, 1856
HpyCH4IV ACGT 3 cut(s) 255, 1840, 1998
HpyF3I CTNAG 8 cut(s) 689, 733, 1202, 1274, 1321, 1664, 2240, 2661
HpySE526I ACGT 3 cut(s) 255, 1840, 1998
Hsp92I GRCGYC 1 cut(s) 219
Hsp92II CATG 3 cut(s) 773, 1503, 2342
Ksp22I TGATCA 4 cut(s) 1633, 1897, 2080, 2628
Lsp1109I GCAGC 3 cut(s) 82, 1194, 1472
LweI GCATC 3 cut(s) 809, 2167, 2229
MaeI CTAG 7 cut(s) 279, 378, 1112, 1268, 1734, 2535, 2674
MaeII ACGT 3 cut(s) 255, 1840, 1998
MboII GAAGA 8 cut(s) 134, 317, 501, 857, 895, 1090, 2404, 2651
MfeI CAATTG 3 cut(s) 356, 428, 560
MflI RGATCY 6 cut(s) 412, 544, 569, 914, 1408, 2049
MhlI GDGCHC 3 cut(s) 136, 1687, 1798
MlsI TGGCCA 1 cut(s) 2492
MluI ACGCGT 1 cut(s) 1918
MluNI TGGCCA 1 cut(s) 2492
MlyI GAGTC 6 cut(s) 630, 700, 1136, 1675, 2422, 2570
MmeI TCCRAC 3 cut(s) 138, 942, 2349
Mox20I TGGCCA 1 cut(s) 2492
MscI TGGCCA 1 cut(s) 2492
MslI CAYNNNNRTG 2 cut(s) 846, 1785
Msp20I TGGCCA 1 cut(s) 2492
MspCI CTTAAG 2 cut(s) 647, 824
MspI CCGG 7 cut(s) 240, 435, 1089, 1508, 1553, 2388, 2442
MspR9I CCNGG 4 cut(s) 436, 1553, 2389, 2442
MunI CAATTG 3 cut(s) 356, 428, 560
MvnI CGCG 4 cut(s) 522, 1920, 2354, 2363
NciI CCSGG 4 cut(s) 436, 1553, 2389, 2442
NheI GCTAGC 1 cut(s) 377
NlaIII CATG 3 cut(s) 773, 1503, 2342
NlaIV GGNNCC 7 cut(s) 244, 367, 439, 571, 916, 1521, 2088
NmeAIII GCCGAG 1 cut(s) 2042
NmuCI GTSAC 7 cut(s) 227, 256, 814, 1174, 1858, 2470, 2558
NspI RCATGY 1 cut(s) 1503
PceI AGGCCT 1 cut(s) 2245
PciI ACATGT 1 cut(s) 1499
PcsI WCGNNNNNNNCGW 1 cut(s) 2466
PfeI GAWTC 5 cut(s) 502, 852, 1307, 1381, 1830
PflFI GACNNNGTC 1 cut(s) 436
PfoI TCCNGGA 1 cut(s) 2387
PkrI GCNGC 5 cut(s) 72, 209, 521, 1184, 1487
PleI GAGTC 6 cut(s) 630, 699, 1136, 1674, 2422, 2570
PpsI GAGTC 6 cut(s) 630, 699, 1136, 1674, 2422, 2570
Ppu21I YACGTR 1 cut(s) 1841
PpuMI RGGWCCY 2 cut(s) 365, 2087
PscI ACATGT 1 cut(s) 1499
PshAI GACNNNNGTC 1 cut(s) 2432
PsiI TTATAA 2 cut(s) 41, 1583
Psp124BI GAGCTC 2 cut(s) 136, 1798
Psp5II RGGWCCY 2 cut(s) 365, 2087
PspN4I GGNNCC 7 cut(s) 244, 367, 439, 571, 916, 1521, 2088
PspPI GGNCC 8 cut(s) 365, 438, 598, 716, 1004, 1519, 1988, 2087
PspPPI RGGWCCY 2 cut(s) 365, 2087
PstI CTGCAG 1 cut(s) 236
PsuI RGATCY 6 cut(s) 412, 544, 569, 914, 1408, 2049
PsyI GACNNNGTC 1 cut(s) 436
RsaI GTAC 7 cut(s) 7, 100, 862, 1909, 2041, 2375, 2668
RsaNI GTAC 7 cut(s) 6, 99, 861, 1908, 2040, 2374, 2667
RseI CAYNNNNRTG 2 cut(s) 846, 1785
SacI GAGCTC 2 cut(s) 136, 1798
SalI GTCGAC 1 cut(s) 1709
SatI GCNGC 5 cut(s) 71, 208, 520, 1183, 1486
Sau96I GGNCC 8 cut(s) 365, 438, 598, 716, 1004, 1519, 1988, 2087
SchI GAGTC 6 cut(s) 630, 700, 1136, 1675, 2422, 2570
ScrFI CCNGG 4 cut(s) 436, 1553, 2389, 2442
SduI GDGCHC 3 cut(s) 136, 1687, 1798
SfaNI GCATC 3 cut(s) 809, 2167, 2229
SfcI CTRYAG 3 cut(s) 232, 403, 981
SinI GGWCC 5 cut(s) 365, 438, 1519, 1988, 2087
SmiMI CAYNNNNRTG 2 cut(s) 846, 1785
SmlI CTYRAG 5 cut(s) 647, 824, 2430, 2568, 2602
SmoI CTYRAG 5 cut(s) 647, 824, 2430, 2568, 2602
SseBI AGGCCT 1 cut(s) 2245
SsiI CCGC 6 cut(s) 207, 520, 812, 2109, 2354, 2363
SspI AATATT 1 cut(s) 1823
SspMI CTAG 7 cut(s) 279, 378, 1112, 1268, 1734, 2535, 2674
SstI GAGCTC 2 cut(s) 136, 1798
StuI AGGCCT 1 cut(s) 2245
StyD4I CCNGG 4 cut(s) 434, 1551, 2387, 2440
TaaI ACNGT 6 cut(s) 227, 662, 923, 1449, 1708, 1856
TaiI ACGT 3 cut(s) 258, 1843, 2001
TaqI TCGA 5 cut(s) 345, 486, 1214, 1528, 1710
TatI WGTACW 4 cut(s) 98, 1907, 2039, 2373
TauI GCSGC 2 cut(s) 210, 522
TfiI GAWTC 5 cut(s) 502, 852, 1307, 1381, 1830
TscAI CASTG 6 cut(s) 546, 667, 934, 1048, 1861, 2479
TseFI GTSAC 7 cut(s) 227, 256, 814, 1174, 1858, 2470, 2558
TseI GCWGC 3 cut(s) 70, 1182, 1485
Tsp45I GTSAC 7 cut(s) 227, 256, 814, 1174, 1858, 2470, 2558
TspDTI ATGAA 9 cut(s) 6, 135, 156, 198, 479, 1009, 1404, 1563, 2658
TspGWI ACGGA 2 cut(s) 1074, 1842
TspRI CASTG 6 cut(s) 546, 667, 934, 1048, 1861, 2479
Tth111I GACNNNGTC 1 cut(s) 436
Vha464I CTTAAG 2 cut(s) 647, 824
VpaK11BI GGWCC 5 cut(s) 365, 438, 1519, 1988, 2087
XbaI TCTAGA 1 cut(s) 1111
XceI RCATGY 1 cut(s) 1503
XcmI CCANNNNNNNNNTGG 1 cut(s) 1677
XmiI GTMKAC 4 cut(s) 222, 1504, 1710, 1932
XspI CTAG 7 cut(s) 279, 378, 1112, 1268, 1734, 2535, 2674
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.