RchiOBHm_Chr5g0001061

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
567363 .. 574706
7344 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28254

Sequence Viewer

Length: 2703 bp
ATGTTTAGGGATCTATCAAGTAATCAACTGACTGGCTCAATACCGGACTTGGGGGGATTGCAAAATCTTCAGTCTCTGGATCTATCAAGTAATCAACTGACTGGCTCCATACCGGACTTCGGGAGATTGCAAAACCTTTCGAAGCTAGATCTACACGACAACTTTCTGGAAGGCACTATACCACCAACCTTGGGTTCACTGGTGAATCTTCGGGAACTGTATCTCTACTGTAATAGGTTATTAGGCTCAATTCCTGATGAATTGGGAAATCTCGTCAATCTTACTCAGTTGGATATTTCTGAGAACCGGCTCACTGGTCCGCTTCCCAATACACTTGGAAATTTGAGGAATCTCAGCGGCTTTTCAATATCCGGGAATTATATCTCTGGTCTATTACCTGTTGACATCATAAAGAGCTGGACTGATATCACAAGTCTGTCACTCATGGGAAACAATTTTAAAGGAAATTTGACTAAAGAAGTATTCAATTTGCCAAACCTTCAGCATCTGCGGATAAGTGACCTGGAAAATGCTACATTTGAGTTACCATCAGACATTACAAACACCAAATATATTTCTTTGATACTGAGGAACTGCTCAATCAATGGTTCCATCCCCAAATACATTGGTGATCAAATGACATCTCTAAAGTACCTAGACTTGAGTTTCAACAGCTTAACTGGTGGACTTCCAGAGTATATGAAATCAGATTTACTTTACATGTCTTTTTCCACAAATATGCTTCAAGGGATGATACCTACTTGGATCCTTCTGGCAGTCCAAACTAGAGATCTATCATTCAATAATTTGTCTGCACCGGACTCTGGAGTACCAATAAACCAAAATCTGAACTTGTTTGCTTGCTGCCCCAACTCCACAGCCACTGAAATGAGGGATCCATTAGAAATGATGAATACATACTGTCTGGAAAAGGAACAAAAATACCATTCTTTGTTTATTAACTGTGGTGGTGGAGAAACAACTGTTAATGGAGTTACTTATGAGCAAGATAATGCCACAGCACCCTCCTTCACAAGTCCAAATAAAAACTGGGCTTATAGCTTTGGAGGTTCTTGGGAAGGAAATGCAAGTTCTAGTGATTACACGAAGAACATGACATGTGGAGTTTCTGTTGCTGATGCACCTTTGTATGATAGAGCTCGTCTTTCCCCTGTATCTCTCAAGTACTATGCTTTCTGTCTACGTGAAGGCAAATACAATGTGACGCTCAAGTTTGCTGAAATTGTATACACTGAAGATACAGACTATACCAGTTTGAGGAAGCGTGCATTCGACATTTATATTCAGGATGACAAAATTAAAGTGCTAAATGATTTCCACATTAGAGAGCTGGCAGGAGGTCCAGATAAACCAATTACCAAAAGTTTTACAGCTGTGGTAAATAAATATAATACTCTATTGAAGATCCACATGTACTGGGATGGCAAGGGGTCTACTGACTTGGGTTATGGAGCTGCTGCTTTTAATGGACCTCTAATATCTGCTATTTCCGTGTCTCCTGAATTCAAAATTCATGATGAGAAACTACGTCCCTTACATATGGCACTGATCGGGATAGGTTCAACCATTATTGCTGTGCTGCTTTTATTGGCTTTTGCCTGGTTGGGCTGGTTCAGAAGCAGAAACTCACCCAAAATAAAAGTAGGTGAAGAAAAAAAAGGGGAAGGGACTCAAGACAAGCATGTAACCCTCAAAGAATTAATAGATGCTACTGGAAAGTTTAGCGACAAAAAGATAATTGGCAGTGGCAGTCTTGGGAAAGTTTATGAGGCCCAACTACTAGGTCTTATTAAAACTACTGTAGCTGTGAAGAGACTTTCCTCTCATTTTAAAGAAAATATCCAAAAATTGAAAAAGGAAATCAAATGGTTATATGAATTGGAGCATGAAAATCTCATTAAATTGTTCGATTATCATATTGAGAAAGACCTCCAACTTCTTGTTTATGAATACATGGAAAACAGATCCCTGGAAGATGCCTTGACCGTTGACTCAAATACCAGATCATTGAAATTTACTTGGGATACTAGATTCAAGATTTGCTTGGGAATAGCAAGGGGTTTGGAGTATCTACACAATCATCGTAAACTAAATATCGCTCATCTGAACATTAAAGCTGTTAATATTCTTCTTGATGGAGATCTTGAGCCAAAGATATCAGATTTTGGATTGGTACATCTTTATGTTGAGGAGGATCAATTTAAGGTCATCAAAAGAGAAGTTGCACAAGGATATACGGCACCAGAGTATTTTCAAGGAAATTTGACGATTAAAGCTGATGTTTACAGCTTTGGGGTGATCCTACTTGAAATTGTTTCTTGGAAAAAAAATGTGATCAAATCACACAATGGAACTGAGTTTCTTGTGGACACGGCTAATGAAAAACATGAACAAGGAAATCTCGAGGACATGATTGATAAGAATTTGGAAACTTGCGATACACAACAAGCCCTGACCGTCTTGAAATTAGCAGTGAAGTGCACCAGTATAGCCCCTAGTGTGAGGCCTTCAATGTCTGACGTTGTGAGTGTTCTGCTAAATAAAAAGACGATTGGCGAGCTTTTTAGATCTGGTGCCCCTAATGTTGGGGAAAAGATCAAGGGCAGTGGGGGCGCCACTTCTATGGACCTTACCTCTATACCATCAACTTCATCTCCTTCTACCAACACCAAAGATGAATAG

Protein Analysis

900

Amino Acids

100.28

Weight (kDa)

6.01

Isoelectric Point (pI)

28.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 16 - 131 3.7e-08 Leucine-rich repeat region
LRR_8 PF13855 45 - 104 5.7e-07 Leucine rich repeat
LRR_8 PF13855 69 - 128 1.7e-06 Leucine rich repeat
Malectin PF11721 317 - 503 2.8e-26 Malectin domain
Pkinase PF00069 582 - 849 1e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 584 - 851 4.9e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 2260, 2594, 2633
AccI GTMKAC 3 cut(s) 1201, 1248, 1454
AciI CCGC 3 cut(s) 320, 357, 511
AcsI RAATTY 7 cut(s) 340, 466, 1523, 1530, 2033, 2281, 2443
AcuI CTGAAG 3 cut(s) 53, 485, 1275
AcyI GRCGYC 1 cut(s) 2634
AfaI GTAC 5 cut(s) 653, 831, 1187, 1436, 2196
AfiI CCNNNNNNNGG 6 cut(s) 50, 119, 191, 824, 1278, 2606
AflIII ACRYGT 3 cut(s) 720, 1118, 1431
AjnI CCWGG 3 cut(s) 522, 1619, 1989
AjuI GAANNNNNNNTTGG 2 cut(s) 178, 210
Alw21I GWGCWC 2 cut(s) 1162, 2504
Alw26I GTCTC 3 cut(s) 78, 1521, 1828
Alw44I GTGCAC 1 cut(s) 2500
AlwNI CAGNNNCTG 3 cut(s) 76, 508, 884
Ama87I CYCGRG 1 cut(s) 2423
AoxI GGCC 2 cut(s) 1791, 2525
ApaLI GTGCAC 1 cut(s) 2500
ApeKI GCWGC 4 cut(s) 864, 1475, 1478, 1600
ApoI RAATTY 7 cut(s) 340, 466, 1523, 1530, 2033, 2281, 2443
AseI ATTAAT 1 cut(s) 1721
AspLEI GCGC 1 cut(s) 2636
AspS9I GGNCC 5 cut(s) 317, 1361, 1490, 1792, 2647
AsuC2I CCSGG 1 cut(s) 373
AsuHPI GGTGA 5 cut(s) 214, 641, 1641, 1679, 2329
AsuII TTCGAA 1 cut(s) 140
AvaI CYCGRG 1 cut(s) 2423
AvaII GGWCC 4 cut(s) 317, 1361, 1490, 2647
BaeGI GKGCMC 2 cut(s) 2504, 2599
BamHI GGATCC 2 cut(s) 765, 895
BanI GGYRCC 3 cut(s) 2260, 2594, 2633
BanII GRGCYC 1 cut(s) 1162
BarI GAAGNNNNNNTAC 2 cut(s) 162, 194
Bbv12I GWGCWC 2 cut(s) 1162, 2504
BbvI GCAGC 4 cut(s) 851, 1462, 1465, 1587
BccI CCATC 5 cut(s) 556, 620, 1436, 2150, 2671
BceAI ACGGC 2 cut(s) 2274, 2409
BciT130I CCWGG 3 cut(s) 524, 1621, 1991
BciVI GTATCC 1 cut(s) 2038
BclI TGATCA 2 cut(s) 631, 2355
BcnI CCSGG 1 cut(s) 373
BcoDI GTCTC 3 cut(s) 78, 1521, 1828
BfaI CTAG 7 cut(s) 146, 656, 786, 1095, 1802, 2049, 2517
BfmI CTRYAG 1 cut(s) 1821
BfoI RGCGCY 1 cut(s) 2637
BfuI GTATCC 1 cut(s) 2038
BglII AGATCT 4 cut(s) 148, 790, 2161, 2588
BisI GCNGC 5 cut(s) 358, 865, 1476, 1479, 1601
BlsI GCNGC 5 cut(s) 359, 866, 1477, 1480, 1602
BmcAI AGTACT 1 cut(s) 1187
Bme1390I CCNGG 4 cut(s) 373, 524, 1621, 1991
Bme18I GGWCC 4 cut(s) 317, 1361, 1490, 2647
BmeT110I CYCGRG 1 cut(s) 2423
BmgT120I GGNCC 5 cut(s) 317, 1361, 1490, 1792, 2647
BmiI GGNNCC 7 cut(s) 106, 610, 767, 897, 2262, 2596, 2635
BmrFI CCNGG 4 cut(s) 373, 524, 1621, 1991
BmrI ACTGGG 2 cut(s) 1060, 1447
BmsI GCATC 4 cut(s) 514, 1129, 1717, 1987
BmuI ACTGGG 2 cut(s) 1060, 1447
BpmI CTGGAG 1 cut(s) 846
Bpu14I TTCGAA 1 cut(s) 140
BpuEI CTTGAG 5 cut(s) 682, 1166, 1214, 1677, 2186
BpuMI CCSGG 1 cut(s) 373
BsaAI YACGTR 1 cut(s) 1205
BsaBI GATNNNNATC 1 cut(s) 2160
BsaHI GRCGYC 1 cut(s) 2634
BsaJI CCNNGG 2 cut(s) 189, 1989
BsaWI WCCGGW 3 cut(s) 43, 112, 817
BsaXI ACNNNNNCTCC 4 cut(s) 1116, 1146, 2659, 2689
Bsc4I CCNNNNNNNGG 6 cut(s) 50, 119, 191, 824, 1278, 2606
Bse118I RCCGGY 1 cut(s) 306
Bse8I GATNNNNATC 1 cut(s) 2160
BseBI CCWGG 3 cut(s) 524, 1621, 1991
BseDI CCNNGG 2 cut(s) 189, 1989
BseGI GGATG 4 cut(s) 612, 756, 1315, 1447
BseJI GATNNNNATC 1 cut(s) 2160
BseLI CCNNNNNNNGG 6 cut(s) 50, 119, 191, 824, 1278, 2606
BseMII CTCAG 5 cut(s) 291, 299, 367, 578, 2367
BseRI GAGGAG 1 cut(s) 2225
BseSI GKGCMC 2 cut(s) 2504, 2599
BseXI GCAGC 4 cut(s) 851, 1462, 1465, 1587
BsgI GTGCAG 1 cut(s) 798
BshFI GGCC 2 cut(s) 1793, 2527
BshNI GGYRCC 3 cut(s) 2260, 2594, 2633
BsiHKAI GWGCWC 2 cut(s) 1162, 2504
BsiHKCI CYCGRG 1 cut(s) 2423
BsiSI CCGG 5 cut(s) 44, 113, 307, 372, 818
BslFI GGGAC 2 cut(s) 1536, 1702
BslI CCNNNNNNNGG 6 cut(s) 50, 119, 191, 824, 1278, 2606
BsmAI GTCTC 3 cut(s) 78, 1521, 1828
BsmFI GGGAC 2 cut(s) 1536, 1702
BsmI GAATGC 1 cut(s) 1289
BsnI GGCC 2 cut(s) 1793, 2527
BsoBI CYCGRG 1 cut(s) 2423
Bsp119I TTCGAA 1 cut(s) 140
Bsp1286I GDGCHC 3 cut(s) 1162, 2504, 2599
BspACI CCGC 3 cut(s) 320, 357, 511
BspANI GGCC 2 cut(s) 1793, 2527
BspCNI CTCAG 5 cut(s) 292, 298, 366, 579, 2368
BspHI TCATGA 1 cut(s) 1534
BspLI GGNNCC 7 cut(s) 106, 610, 767, 897, 2262, 2596, 2635
BspT104I TTCGAA 1 cut(s) 140
BspT107I GGYRCC 3 cut(s) 2260, 2594, 2633
BsrFI RCCGGY 1 cut(s) 306
BssAI RCCGGY 1 cut(s) 306
BssECI CCNNGG 2 cut(s) 189, 1989
BssNAI GTATAC 1 cut(s) 1249
BssNI GRCGYC 1 cut(s) 2634
BssT1I CCWWGG 1 cut(s) 189
Bst1107I GTATAC 1 cut(s) 1249
Bst2UI CCWGG 3 cut(s) 524, 1621, 1991
Bst4CI ACNGT 8 cut(s) 219, 230, 923, 965, 985, 1822, 2008, 2479
Bst6I CTCTTC 1 cut(s) 1826
BstACI GRCGYC 1 cut(s) 2634
BstBAI YACGTR 1 cut(s) 1205
BstBI TTCGAA 1 cut(s) 140
BstC8I GCNNGC 4 cut(s) 862, 1287, 1353, 2579
BstDEI CTNAG 5 cut(s) 285, 300, 353, 587, 2376
BstF5I GGATG 4 cut(s) 612, 756, 1315, 1447
BstH2I RGCGCY 1 cut(s) 2637
BstHHI GCGC 1 cut(s) 2636
BstMAI GTCTC 3 cut(s) 78, 1521, 1828
BstMWI GCNNNNNNNGC 1 cut(s) 2631
BstNI CCWGG 3 cut(s) 524, 1621, 1991
BstNSI RCATGY 4 cut(s) 724, 1122, 1435, 1706
BstSCI CCNGG 4 cut(s) 371, 522, 1619, 1989
BstSFI CTRYAG 1 cut(s) 1821
BstSLI GKGCMC 2 cut(s) 2504, 2599
BstV1I GCAGC 4 cut(s) 851, 1462, 1465, 1587
BstXI CCANNNNNNTGG 1 cut(s) 2644
BstZ17I GTATAC 1 cut(s) 1249
BsuI GTATCC 1 cut(s) 2038
BsuRI GGCC 2 cut(s) 1793, 2527
BtsCI GGATG 4 cut(s) 612, 756, 1315, 1447
BtsI GCAGTG 3 cut(s) 1771, 2499, 2632
BtsIMutI CAGTG 8 cut(s) 197, 312, 882, 1251, 1565, 1771, 2499, 2632
Cac8I GCNNGC 4 cut(s) 862, 1287, 1353, 2579
CaiI CAGNNNCTG 3 cut(s) 76, 508, 884
CciI TCATGA 1 cut(s) 1534
CfoI GCGC 1 cut(s) 2636
Cfr10I RCCGGY 1 cut(s) 306
Cfr13I GGNCC 5 cut(s) 317, 1361, 1490, 1792, 2647
CseI GACGC 1 cut(s) 1234
Csp6I GTAC 5 cut(s) 652, 830, 1186, 1435, 2195
CspCI CAANNNNNGTGG 4 cut(s) 171, 206, 2608, 2643
CviQI GTAC 5 cut(s) 652, 830, 1186, 1435, 2195
DdeI CTNAG 5 cut(s) 285, 300, 353, 587, 2376
DinI GGCGCC 1 cut(s) 2635
DraI TTTAAA 2 cut(s) 460, 1852
Eam1104I CTCTTC 1 cut(s) 1826
EarI CTCTTC 1 cut(s) 1826
Ecl136II GAGCTC 1 cut(s) 1160
Eco130I CCWWGG 1 cut(s) 189
Eco147I AGGCCT 1 cut(s) 2527
Eco24I GRGCYC 1 cut(s) 1162
Eco32I GATATC 2 cut(s) 427, 2178
Eco47I GGWCC 4 cut(s) 317, 1361, 1490, 2647
Eco53kI GAGCTC 1 cut(s) 1160
Eco57I CTGAAG 3 cut(s) 53, 485, 1275
Eco88I CYCGRG 1 cut(s) 2423
EcoICRI GAGCTC 1 cut(s) 1160
EcoRI GAATTC 1 cut(s) 1523
EcoRII CCWGG 3 cut(s) 522, 1619, 1989
EcoRV GATATC 2 cut(s) 427, 2178
EcoT14I CCWWGG 1 cut(s) 189
EcoT38I GRGCYC 1 cut(s) 1162
EgeI GGCGCC 1 cut(s) 2635
EheI GGCGCC 1 cut(s) 2635
ErhI CCWWGG 1 cut(s) 189
FalI AAGNNNNNCTT 2 cut(s) 2048, 2080
FaqI GGGAC 2 cut(s) 1536, 1702
FauNDI CATATG 1 cut(s) 1560
FbaI TGATCA 2 cut(s) 631, 2355
FblI GTMKAC 3 cut(s) 1201, 1248, 1454
Fnu4HI GCNGC 5 cut(s) 358, 865, 1476, 1479, 1601
FokI GGATG 4 cut(s) 599, 763, 1322, 1454
FriOI GRGCYC 1 cut(s) 1162
Fsp4HI GCNGC 5 cut(s) 358, 865, 1476, 1479, 1601
FspBI CTAG 7 cut(s) 146, 656, 786, 1095, 1802, 2049, 2517
GlaI GCGC 1 cut(s) 2635
GluI GCNGC 5 cut(s) 358, 865, 1476, 1479, 1601
GsuI CTGGAG 1 cut(s) 846
HaeII RGCGCY 1 cut(s) 2637
HaeIII GGCC 2 cut(s) 1793, 2527
HapII CCGG 5 cut(s) 44, 113, 307, 372, 818
HgaI GACGC 1 cut(s) 1234
HhaI GCGC 1 cut(s) 2636
Hin1I GRCGYC 1 cut(s) 2634
Hin6I GCGC 1 cut(s) 2634
HinP1I GCGC 1 cut(s) 2634
HincII GTYRAC 2 cut(s) 403, 2011
HindII GTYRAC 2 cut(s) 403, 2011
HinfI GANTC 6 cut(s) 205, 349, 821, 1690, 2012, 2052
HpaII CCGG 5 cut(s) 44, 113, 307, 372, 818
HphI GGTGA 5 cut(s) 214, 641, 1641, 1679, 2329
Hpy188I TCNGA 8 cut(s) 301, 553, 709, 849, 1637, 2127, 2182, 2539
HpyAV CCTTC 9 cut(s) 164, 509, 779, 1039, 1073, 1202, 1679, 2538, 2688
HpyCH4III ACNGT 8 cut(s) 219, 230, 923, 965, 985, 1822, 2008, 2479
HpyCH4IV ACGT 3 cut(s) 1204, 1549, 2541
HpyCH4V TGCA 8 cut(s) 61, 130, 815, 1088, 1142, 1289, 2246, 2502
HpyF10VI GCNNNNNNNGC 1 cut(s) 2631
HpyF3I CTNAG 5 cut(s) 285, 300, 353, 587, 2376
HpySE526I ACGT 3 cut(s) 1204, 1549, 2541
Hsp92I GRCGYC 1 cut(s) 2634
HspAI GCGC 1 cut(s) 2634
KasI GGCGCC 1 cut(s) 2633
Ksp22I TGATCA 2 cut(s) 631, 2355
LmnI GCTCC 3 cut(s) 110, 1472, 1903
Lsp1109I GCAGC 4 cut(s) 851, 1462, 1465, 1587
LweI GCATC 4 cut(s) 514, 1129, 1717, 1987
MaeI CTAG 7 cut(s) 146, 656, 786, 1095, 1802, 2049, 2517
MaeII ACGT 3 cut(s) 1204, 1549, 2541
MaeIII GTNAC 6 cut(s) 438, 518, 543, 994, 1222, 1705
MboII GAAGA 9 cut(s) 59, 200, 1120, 1268, 1435, 1682, 1843, 2006, 2141
MhlI GDGCHC 3 cut(s) 1162, 2504, 2599
Mly113I GGCGCC 1 cut(s) 2634
MlyI GAGTC 3 cut(s) 815, 1684, 2006
MmeI TCCRAC 2 cut(s) 270, 1978
MslI CAYNNNNRTG 4 cut(s) 737, 887, 2202, 2642
MspA1I CMGCKG 2 cut(s) 357, 1394
MspI CCGG 5 cut(s) 44, 113, 307, 372, 818
MspR9I CCNGG 4 cut(s) 373, 524, 1621, 1991
Mva1269I GAATGC 1 cut(s) 1289
MvaI CCWGG 3 cut(s) 524, 1621, 1991
MwoI GCNNNNNNNGC 1 cut(s) 2631
NarI GGCGCC 1 cut(s) 2634
NciI CCSGG 1 cut(s) 373
NdeI CATATG 1 cut(s) 1560
NlaIV GGNNCC 7 cut(s) 106, 610, 767, 897, 2262, 2596, 2635
NmuCI GTSAC 3 cut(s) 438, 518, 1222
NspI RCATGY 4 cut(s) 724, 1122, 1435, 1706
NspV TTCGAA 1 cut(s) 140
PaeR7I CTCGAG 1 cut(s) 2423
PagI TCATGA 1 cut(s) 1534
PceI AGGCCT 1 cut(s) 2527
PciI ACATGT 3 cut(s) 720, 1118, 1431
PctI GAATGC 1 cut(s) 1289
PfeI GAWTC 3 cut(s) 205, 349, 2052
PfoI TCCNGGA 1 cut(s) 371
PkrI GCNGC 5 cut(s) 359, 866, 1477, 1480, 1602
PleI GAGTC 3 cut(s) 815, 1684, 2006
PluTI GGCGCC 1 cut(s) 2637
PpsI GAGTC 3 cut(s) 815, 1684, 2006
Ppu21I YACGTR 1 cut(s) 1205
PscI ACATGT 3 cut(s) 720, 1118, 1431
PshBI ATTAAT 1 cut(s) 1721
Psp124BI GAGCTC 1 cut(s) 1162
Psp6I CCWGG 3 cut(s) 522, 1619, 1989
PspGI CCWGG 3 cut(s) 522, 1619, 1989
PspN4I GGNNCC 7 cut(s) 106, 610, 767, 897, 2262, 2596, 2635
PspPI GGNCC 5 cut(s) 317, 1361, 1490, 1792, 2647
PstNI CAGNNNCTG 3 cut(s) 76, 508, 884
PvuII CAGCTG 1 cut(s) 1394
RsaI GTAC 5 cut(s) 653, 831, 1187, 1436, 2196
RsaNI GTAC 5 cut(s) 652, 830, 1186, 1435, 2195
RseI CAYNNNNRTG 4 cut(s) 737, 887, 2202, 2642
SacI GAGCTC 1 cut(s) 1162
SatI GCNGC 5 cut(s) 358, 865, 1476, 1479, 1601
Sau96I GGNCC 5 cut(s) 317, 1361, 1490, 1792, 2647
ScaI AGTACT 1 cut(s) 1187
SchI GAGTC 3 cut(s) 815, 1684, 2006
ScrFI CCNGG 4 cut(s) 373, 524, 1621, 1991
SduI GDGCHC 3 cut(s) 1162, 2504, 2599
SfaNI GCATC 4 cut(s) 514, 1129, 1717, 1987
SfcI CTRYAG 1 cut(s) 1821
SfoI GGCGCC 1 cut(s) 2635
Sfr274I CTCGAG 1 cut(s) 2423
SfuI TTCGAA 1 cut(s) 140
SinI GGWCC 4 cut(s) 317, 1361, 1490, 2647
SlaI CTCGAG 1 cut(s) 2423
SmiMI CAYNNNNRTG 4 cut(s) 737, 887, 2202, 2642
SmlI CTYRAG 6 cut(s) 661, 1181, 1229, 1692, 2165, 2423
SmoI CTYRAG 6 cut(s) 661, 1181, 1229, 1692, 2165, 2423
SseBI AGGCCT 1 cut(s) 2527
SsiI CCGC 3 cut(s) 320, 357, 511
SspDI GGCGCC 1 cut(s) 2633
SspI AATATT 1 cut(s) 2146
SspMI CTAG 7 cut(s) 146, 656, 786, 1095, 1802, 2049, 2517
SstI GAGCTC 1 cut(s) 1162
StuI AGGCCT 1 cut(s) 2527
StyD4I CCNGG 4 cut(s) 371, 522, 1619, 1989
StyI CCWWGG 1 cut(s) 189
TaaI ACNGT 8 cut(s) 219, 230, 923, 965, 985, 1822, 2008, 2479
TaiI ACGT 3 cut(s) 1207, 1552, 2544
TaqI TCGA 4 cut(s) 140, 1293, 1929, 2424
TatI WGTACW 2 cut(s) 1185, 1434
TauI GCSGC 1 cut(s) 360
TfiI GAWTC 3 cut(s) 205, 349, 2052
TscAI CASTG 8 cut(s) 204, 319, 889, 1258, 1572, 1771, 2499, 2632
TseFI GTSAC 3 cut(s) 438, 518, 1222
TseI GCWGC 4 cut(s) 864, 1475, 1478, 1600
Tsp45I GTSAC 3 cut(s) 438, 518, 1222
TspGWI ACGGA 1 cut(s) 1501
TspRI CASTG 8 cut(s) 204, 319, 889, 1258, 1572, 1771, 2499, 2632
VneI GTGCAC 1 cut(s) 2500
VpaK11BI GGWCC 4 cut(s) 317, 1361, 1490, 2647
VspI ATTAAT 1 cut(s) 1721
XapI RAATTY 7 cut(s) 340, 466, 1523, 1530, 2033, 2281, 2443
XceI RCATGY 4 cut(s) 724, 1122, 1435, 1706
XcmI CCANNNNNNNNNTGG 1 cut(s) 1047
XhoI CTCGAG 1 cut(s) 2423
XmiI GTMKAC 3 cut(s) 1201, 1248, 1454
XspI CTAG 7 cut(s) 146, 656, 786, 1095, 1802, 2049, 2517
ZrmI AGTACT 1 cut(s) 1187
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.