Rroxscaffold_1G00075230

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
96039885 .. 96051690
11806 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00075230.1

Sequence Viewer

Length: 2463 bp
ATGATTGGTCCTCCCCACCACGTGTTCCGTGCAGGTGCCCTACGCAAGATTCTCTCTCGATTCACCGCCGTGAATATACAAGAAGCTGTCGAAGAACACAACAACATTCTTCTTGGGACTAATTGTCCTTTGAAATTTGCTGGTCCTAGTCTTCGCTTACTCGGACGAAGGGGTATGTATCTAATATATAGGAGGGATCTATCAAGTAATCAACTGACTGGCTCAATACCGGACTTGGGGGGATTGCAAAATCTTCAGTCTCTGGATCTATCAAGTAATCAACTGACTGGCTCCATACCGGACTTCGGGAGATTGCAAAACCTTTCGAAGCTAGCTCTACACGACAACTTTCTGGAAGGCATTATACCACCAACCTTGGGTTCACTAGTGAATCTTCGGGAACTGTATCTCCAGGCTAATAGGTTATCAGGCTCAATTCCTGATGAATTGGGAAATCTCGTCAATCTTACTCAGTTGCGGATAAGTGACCTGGAAAATGCTGGATTTGAGTTACCATCAGACATTACAAACACCAAATATGTTTCTTTAGACTTGAGTTTCAACAGCTTAACTGGTGGACTTCCAGAGTATATGAAATCAGATTTACTTTACATGTCTTTTTCCACAAATATGCTTAATGGGATGATACCTGCTTGGATCCTTCAGACAGTCCAAACTAGTGATCTATCATTCAATAATTTGTCAGCACCGGACTCTGGAGTACCAATAAACCAAAATCTGAACTTGTTTGCTTGCTGCCCCAACTCCGCAGCCACTGAAATGAGGGATCCATTAGAAATGATGAATACATACTGTCCGGAAAAGGAACAAAAATACCATTCTTTGTTTATTAACTGTGGTGGTGGAGAAACAACTGTTAATGGAGTTACTTATGAGCAAGATAACGCCACAGCACCCTTCTTCATAAGTCCAAATAAAAACTGGGCTCATAGCTTTGGAGGTTCTTGGGAAGGAAATGCCAGTTCTAGTGATTACACGAAGAACATGACATGTGGAGTTTCTGTTGCTGAGGCACCTTTGTATGATAGAGCTCGTCTTTCCCCTGTATCTCTCAAGTACTATGCTTTCTGTCTACGTGAAGGCAAATACAATGTGACGCTCAAGTTTGCTGAAATTGTATACACTGAAGATACAGACTATACCAGTTTGAGGAAGCGTGCATTCGACATTTATATTCAGGATGACAAAATTAAAGTGCTAAATGATTTCCACATTAGAGAGGTGGCAGGAGGTCCAGATAAACCAATTGCCAAAAGTTTTACAGCTGTGGTAAATAAATATAATACTCTATTGAAGATCCACATGTACTGGGATGGCAAGGGGTCTACTGACTTGGGTTATGGAGCTGCTGCTTTTAATGGACCTCTAATATCTGCTATTTCCGTGTCTCCTGAATTCAAAATTCATGATGAGACACTACGTCCCTTACATATTGCACTGATTGGGATAGGGTCAACCATTATTGCTGTGCTGCTTTTATTGGCTTTTGCCTGGATGGGCTGGTTCAGAAGCAGAAACTCACCCAATGCTACTGGAAAGTTTAGCGACAAAAAGATAATTGGCAGTGGCAGTCTTGGGAAAGTTTATGAGGCACAACTACTAGGTCTTATTAAAACTACTGTAGCTGTGAAGAGACTTTCCTCTCATTTTAAAGAAAATATCCAAAAATTGAAAAAGGAAATCAAATGGTTATATGAATTGGAGCATGAAAATCTCATTAAATTGTTCGATTATCATATTGAGAAAGACCTCCAACTTCTTGTTTATGAATACATGGAAAACGGATCCCTGGAAGATGCCTTGACCGTCGACTCAAATACCAGATCATTGAAATTTACTTGGGATACTAGATCCAAGATTTGCTTGGGAATAGCAAGGGGTTTGGAGTATATACACAATCATCGTAAACTAAATATCGCTCATATGAACATTAAAGCTGTTAATATTCTTCTTGATGGAGATCTTGAGCCAAAGATATCAGATTTTGGATTGGCACATCTTTATGTTGAGGAGGATCAATTTAAGGTCATCAAAAGAGAAGTTGCACAAGGATATACGGCACCAGAGTATTTTCAAGGAAATTTGACGATTAAAGCTGATGTTTACAGCTTTGGGGTGATCCTACTTGAAATTGCTAATGAAAAACATGTACAAGGAAATCTCGAGGACATGATTGATAAGAATTTGGAAACTTGCGATACACAACAAGCCCTGACCTTCTTGAAATTAGCAGTGAAGTGCACCAATATAGCCCCTAGTGCGAGGCCTTCAATGTCTGACGTTGTGAGTGTTCTGCTAAATAAAAAGACGATTGGCGAGCTTTTTAGATCTGCTGCCCCTAATGTTGGGGAAAAGATCAAGGGCAGTGGGGGCGCCACTTCTATGGACCTTACCTCTATACCATCAACTTCATCTCCTTCTACCAACACCAAAGATGAATAG

Protein Analysis

820

Amino Acids

91.01

Weight (kDa)

6.18

Isoelectric Point (pI)

37.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 78 - 162 1.7e-06 Leucine-rich repeat region
LRR_8 PF13855 107 - 162 2.4e-06 Leucine rich repeat
Malectin PF11721 281 - 467 1.2e-24 Malectin domain
Pkinase PF00069 522 - 769 3.7e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 524 - 772 2.7e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 23
Acc36I ACCTGC 2 cut(s) 23, 658
AccB1I GGYRCC 4 cut(s) 35, 1033, 2080, 2393
AccI GTMKAC 4 cut(s) 1093, 1140, 1346, 1830
AccIII TCCGGA 1 cut(s) 817
AciI CCGC 3 cut(s) 66, 478, 768
AcsI RAATTY 6 cut(s) 134, 1415, 1422, 1853, 2101, 2203
AcuI CTGAAG 3 cut(s) 239, 647, 1167
AcvI CACGTG 1 cut(s) 22
AcyI GRCGYC 1 cut(s) 2394
AdeI CACNNNGTG 1 cut(s) 22
AfaI GTAC 4 cut(s) 723, 1079, 1328, 2172
AfiI CCNNNNNNNGG 6 cut(s) 236, 305, 377, 716, 1170, 2366
AflIII ACRYGT 5 cut(s) 21, 612, 1010, 1323, 2167
AhdI GACNNNNNGTC 2 cut(s) 123, 1440
AhlI ACTAGT 2 cut(s) 385, 677
AjnI CCWGG 4 cut(s) 411, 489, 1511, 1809
AjuI GAANNNNNNNTTGG 2 cut(s) 364, 396
AleI CACNNNNGTG 1 cut(s) 68
AloI GAACNNNNNNTCC 2 cut(s) 393, 425
Alw21I GWGCWC 2 cut(s) 1054, 2264
Alw26I GTCTC 4 cut(s) 264, 1413, 1427, 1648
Alw44I GTGCAC 1 cut(s) 2260
AlwNI CAGNNNCTG 2 cut(s) 262, 776
Ama87I CYCGRG 1 cut(s) 2183
Aor13HI TCCGGA 1 cut(s) 817
AoxI GGCC 1 cut(s) 2285
ApaLI GTGCAC 1 cut(s) 2260
ApeKI GCWGC 6 cut(s) 756, 770, 1367, 1370, 1492, 2354
ApoI RAATTY 6 cut(s) 134, 1415, 1422, 1853, 2101, 2203
AspLEI GCGC 1 cut(s) 2396
AspS9I GGNCC 5 cut(s) 8, 143, 1253, 1382, 2407
AsuHPI GGTGA 3 cut(s) 55, 1533, 2149
AsuII TTCGAA 1 cut(s) 326
AsuNHI GCTAGC 1 cut(s) 331
AvaI CYCGRG 1 cut(s) 2183
AvaII GGWCC 5 cut(s) 8, 143, 1253, 1382, 2407
BaeGI GKGCMC 2 cut(s) 40, 2264
BamHI GGATCC 3 cut(s) 657, 787, 1805
BanI GGYRCC 4 cut(s) 35, 1033, 2080, 2393
BanII GRGCYC 2 cut(s) 949, 1054
BarI GAAGNNNNNNTAC 2 cut(s) 348, 380
BbrPI CACGTG 1 cut(s) 22
BbsI GAAGAC 1 cut(s) 143
Bbv12I GWGCWC 2 cut(s) 1054, 2264
BbvCI CCTCAGC 1 cut(s) 1029
BbvI GCAGC 6 cut(s) 743, 782, 1354, 1357, 1479, 2341
BccI CCATC 5 cut(s) 523, 1328, 1510, 1970, 2431
BceAI ACGGC 2 cut(s) 53, 2094
BciT130I CCWGG 4 cut(s) 413, 491, 1513, 1811
BciVI GTATCC 1 cut(s) 1858
BcoDI GTCTC 4 cut(s) 264, 1413, 1427, 1648
BcuI ACTAGT 2 cut(s) 385, 677
BfaI CTAG 8 cut(s) 147, 332, 386, 678, 987, 1622, 1869, 2277
BfmI CTRYAG 1 cut(s) 1641
BfoI RGCGCY 1 cut(s) 2397
BfuAI ACCTGC 2 cut(s) 23, 658
BfuI GTATCC 1 cut(s) 1858
BglII AGATCT 2 cut(s) 1981, 2348
BisI GCNGC 6 cut(s) 757, 771, 1368, 1371, 1493, 2355
BlsI GCNGC 6 cut(s) 758, 772, 1369, 1372, 1494, 2356
BmcAI AGTACT 1 cut(s) 1079
Bme1390I CCNGG 4 cut(s) 413, 491, 1513, 1811
Bme18I GGWCC 5 cut(s) 8, 143, 1253, 1382, 2407
BmeRI GACNNNNNGTC 2 cut(s) 123, 1440
BmeT110I CYCGRG 1 cut(s) 2183
BmgT120I GGNCC 5 cut(s) 8, 143, 1253, 1382, 2407
BmiI GGNNCC 8 cut(s) 37, 292, 659, 789, 1035, 1807, 2082, 2395
BmrFI CCNGG 4 cut(s) 413, 491, 1513, 1811
BmrI ACTGGG 2 cut(s) 952, 1339
BmsI GCATC 1 cut(s) 1807
BmtI GCTAGC 1 cut(s) 335
BmuI ACTGGG 2 cut(s) 952, 1339
BpiI GAAGAC 1 cut(s) 143
BpmI CTGGAG 2 cut(s) 395, 738
Bpu10I CCTNAGC 1 cut(s) 1029
Bpu14I TTCGAA 1 cut(s) 326
BpuEI CTTGAG 4 cut(s) 574, 1058, 1106, 2006
BsaAI YACGTR 2 cut(s) 22, 1097
BsaBI GATNNNNATC 1 cut(s) 1980
BsaHI GRCGYC 1 cut(s) 2394
BsaJI CCNNGG 2 cut(s) 375, 1809
BsaWI WCCGGW 4 cut(s) 229, 298, 709, 817
BsaXI ACNNNNNCTCC 6 cut(s) 393, 423, 1008, 1038, 2419, 2449
Bsc4I CCNNNNNNNGG 6 cut(s) 236, 305, 377, 716, 1170, 2366
Bse1I ACTGG 8 cut(s) 223, 292, 577, 947, 981, 1164, 1334, 1558
Bse8I GATNNNNATC 1 cut(s) 1980
BseAI TCCGGA 1 cut(s) 817
BseBI CCWGG 4 cut(s) 413, 491, 1513, 1811
BseDI CCNNGG 2 cut(s) 375, 1809
BseGI GGATG 4 cut(s) 648, 1207, 1339, 1521
BseJI GATNNNNATC 1 cut(s) 1980
BseLI CCNNNNNNNGG 6 cut(s) 236, 305, 377, 716, 1170, 2366
BseMII CTCAG 2 cut(s) 485, 1020
BseNI ACTGG 8 cut(s) 223, 292, 577, 947, 981, 1164, 1334, 1558
BseRI GAGGAG 1 cut(s) 2045
BseSI GKGCMC 2 cut(s) 40, 2264
BseXI GCAGC 6 cut(s) 743, 782, 1354, 1357, 1479, 2341
BsgI GTGCAG 1 cut(s) 51
BshFI GGCC 1 cut(s) 2287
BshNI GGYRCC 4 cut(s) 35, 1033, 2080, 2393
BsiHKAI GWGCWC 2 cut(s) 1054, 2264
BsiHKCI CYCGRG 1 cut(s) 2183
BsiSI CCGG 4 cut(s) 230, 299, 710, 818
BslFI GGGAC 2 cut(s) 130, 1428
BslI CCNNNNNNNGG 6 cut(s) 236, 305, 377, 716, 1170, 2366
BsmAI GTCTC 4 cut(s) 264, 1413, 1427, 1648
BsmFI GGGAC 2 cut(s) 130, 1428
BsmI GAATGC 1 cut(s) 1181
BsnI GGCC 1 cut(s) 2287
BsoBI CYCGRG 1 cut(s) 2183
Bsp119I TTCGAA 1 cut(s) 326
Bsp1286I GDGCHC 4 cut(s) 40, 949, 1054, 2264
Bsp13I TCCGGA 1 cut(s) 817
Bsp1407I TGTACA 1 cut(s) 2170
BspACI CCGC 3 cut(s) 66, 478, 768
BspANI GGCC 1 cut(s) 2287
BspCNI CTCAG 2 cut(s) 484, 1021
BspEI TCCGGA 1 cut(s) 817
BspHI TCATGA 1 cut(s) 1426
BspLI GGNNCC 8 cut(s) 37, 292, 659, 789, 1035, 1807, 2082, 2395
BspMI ACCTGC 2 cut(s) 23, 658
BspOI GCTAGC 1 cut(s) 335
BspT104I TTCGAA 1 cut(s) 326
BspT107I GGYRCC 4 cut(s) 35, 1033, 2080, 2393
BsrGI TGTACA 1 cut(s) 2170
BsrI ACTGG 8 cut(s) 223, 292, 577, 947, 981, 1164, 1334, 1558
BssECI CCNNGG 2 cut(s) 375, 1809
BssNAI GTATAC 1 cut(s) 1141
BssNI GRCGYC 1 cut(s) 2394
BssT1I CCWWGG 1 cut(s) 375
Bst1107I GTATAC 1 cut(s) 1141
Bst2UI CCWGG 4 cut(s) 413, 491, 1513, 1811
Bst4CI ACNGT 7 cut(s) 405, 670, 815, 857, 877, 1642, 1828
Bst6I CTCTTC 1 cut(s) 1646
BstACI GRCGYC 1 cut(s) 2394
BstAUI TGTACA 1 cut(s) 2170
BstBAI YACGTR 2 cut(s) 22, 1097
BstBI TTCGAA 1 cut(s) 326
BstC8I GCNNGC 4 cut(s) 333, 754, 1179, 2339
BstDEI CTNAG 2 cut(s) 471, 1029
BstF5I GGATG 4 cut(s) 648, 1207, 1339, 1521
BstH2I RGCGCY 1 cut(s) 2397
BstHHI GCGC 1 cut(s) 2396
BstMAI GTCTC 4 cut(s) 264, 1413, 1427, 1648
BstMWI GCNNNNNNNGC 2 cut(s) 2279, 2391
BstNI CCWGG 4 cut(s) 413, 491, 1513, 1811
BstNSI RCATGY 4 cut(s) 616, 1014, 1327, 2171
BstSCI CCNGG 4 cut(s) 411, 489, 1511, 1809
BstSFI CTRYAG 1 cut(s) 1641
BstSLI GKGCMC 2 cut(s) 40, 2264
BstV1I GCAGC 6 cut(s) 743, 782, 1354, 1357, 1479, 2341
BstV2I GAAGAC 1 cut(s) 143
BstX2I RGATCY 9 cut(s) 196, 265, 657, 787, 1317, 1805, 1871, 1981, 2348
BstXI CCANNNNNNTGG 1 cut(s) 2404
BstYI RGATCY 9 cut(s) 196, 265, 657, 787, 1317, 1805, 1871, 1981, 2348
BstZ17I GTATAC 1 cut(s) 1141
BsuI GTATCC 1 cut(s) 1858
BsuRI GGCC 1 cut(s) 2287
BtsCI GGATG 4 cut(s) 648, 1207, 1339, 1521
BtsI GCAGTG 3 cut(s) 1591, 2259, 2392
BtsIMutI CAGTG 6 cut(s) 774, 1143, 1457, 1591, 2259, 2392
BveI ACCTGC 2 cut(s) 23, 658
Cac8I GCNNGC 4 cut(s) 333, 754, 1179, 2339
CaiI CAGNNNCTG 2 cut(s) 262, 776
CciI TCATGA 1 cut(s) 1426
CfoI GCGC 1 cut(s) 2396
Cfr13I GGNCC 5 cut(s) 8, 143, 1253, 1382, 2407
CseI GACGC 1 cut(s) 1126
Csp6I GTAC 4 cut(s) 722, 1078, 1327, 2171
CspCI CAANNNNNGTGG 4 cut(s) 357, 392, 2368, 2403
CviAII CATG 9 cut(s) 613, 1006, 1011, 1324, 1427, 1727, 1795, 2168, 2191
CviQI GTAC 4 cut(s) 722, 1078, 1327, 2171
DdeI CTNAG 2 cut(s) 471, 1029
DinI GGCGCC 1 cut(s) 2395
DraI TTTAAA 1 cut(s) 1672
DraIII CACNNNGTG 1 cut(s) 22
DriI GACNNNNNGTC 2 cut(s) 123, 1440
Eam1104I CTCTTC 1 cut(s) 1646
Eam1105I GACNNNNNGTC 2 cut(s) 123, 1440
EarI CTCTTC 1 cut(s) 1646
Ecl136II GAGCTC 1 cut(s) 1052
Eco130I CCWWGG 1 cut(s) 375
Eco147I AGGCCT 1 cut(s) 2287
Eco24I GRGCYC 2 cut(s) 949, 1054
Eco32I GATATC 1 cut(s) 1998
Eco47I GGWCC 5 cut(s) 8, 143, 1253, 1382, 2407
Eco53kI GAGCTC 1 cut(s) 1052
Eco57I CTGAAG 3 cut(s) 239, 647, 1167
Eco72I CACGTG 1 cut(s) 22
Eco88I CYCGRG 1 cut(s) 2183
EcoICRI GAGCTC 1 cut(s) 1052
EcoRI GAATTC 1 cut(s) 1415
EcoRII CCWGG 4 cut(s) 411, 489, 1511, 1809
EcoRV GATATC 1 cut(s) 1998
EcoT14I CCWWGG 1 cut(s) 375
EcoT38I GRGCYC 2 cut(s) 949, 1054
EgeI GGCGCC 1 cut(s) 2395
EheI GGCGCC 1 cut(s) 2395
ErhI CCWWGG 1 cut(s) 375
FaeI CATG 9 cut(s) 616, 1009, 1014, 1327, 1430, 1730, 1798, 2171, 2194
FalI AAGNNNNNCTT 2 cut(s) 1868, 1900
FaqI GGGAC 2 cut(s) 130, 1428
FatI CATG 9 cut(s) 612, 1005, 1010, 1323, 1426, 1726, 1794, 2167, 2190
FauNDI CATATG 1 cut(s) 1944
FblI GTMKAC 4 cut(s) 1093, 1140, 1346, 1830
Fnu4HI GCNGC 6 cut(s) 757, 771, 1368, 1371, 1493, 2355
FokI GGATG 4 cut(s) 655, 1214, 1346, 1528
FriOI GRGCYC 2 cut(s) 949, 1054
Fsp4HI GCNGC 6 cut(s) 757, 771, 1368, 1371, 1493, 2355
FspBI CTAG 8 cut(s) 147, 332, 386, 678, 987, 1622, 1869, 2277
GlaI GCGC 1 cut(s) 2395
GluI GCNGC 6 cut(s) 757, 771, 1368, 1371, 1493, 2355
GsuI CTGGAG 2 cut(s) 395, 738
HaeII RGCGCY 1 cut(s) 2397
HaeIII GGCC 1 cut(s) 2287
HapII CCGG 4 cut(s) 230, 299, 710, 818
HgaI GACGC 1 cut(s) 1126
HhaI GCGC 1 cut(s) 2396
Hin1I GRCGYC 1 cut(s) 2394
Hin1II CATG 9 cut(s) 616, 1009, 1014, 1327, 1430, 1730, 1798, 2171, 2194
Hin6I GCGC 1 cut(s) 2394
HinP1I GCGC 1 cut(s) 2394
HincII GTYRAC 2 cut(s) 1476, 1831
HindII GTYRAC 2 cut(s) 1476, 1831
HinfI GANTC 5 cut(s) 49, 60, 391, 713, 1832
HpaII CCGG 4 cut(s) 230, 299, 710, 818
HphI GGTGA 3 cut(s) 55, 1533, 2149
Hpy188I TCNGA 8 cut(s) 164, 520, 601, 666, 741, 1529, 2002, 2299
Hpy99I CGWCG 1 cut(s) 1832
HpyAV CCTTC 9 cut(s) 162, 350, 671, 928, 965, 1094, 2248, 2298, 2448
HpyCH4III ACNGT 7 cut(s) 405, 670, 815, 857, 877, 1642, 1828
HpyCH4IV ACGT 4 cut(s) 21, 1096, 1441, 2301
HpyCH4V TGCA 7 cut(s) 32, 247, 316, 1181, 1457, 2066, 2262
HpyF10VI GCNNNNNNNGC 2 cut(s) 2279, 2391
HpyF3I CTNAG 2 cut(s) 471, 1029
HpySE526I ACGT 4 cut(s) 21, 1096, 1441, 2301
Hsp92I GRCGYC 1 cut(s) 2394
Hsp92II CATG 9 cut(s) 616, 1009, 1014, 1327, 1430, 1730, 1798, 2171, 2194
HspAI GCGC 1 cut(s) 2394
KasI GGCGCC 1 cut(s) 2393
Kpn2I TCCGGA 1 cut(s) 817
LmnI GCTCC 3 cut(s) 296, 1364, 1723
Lsp1109I GCAGC 6 cut(s) 743, 782, 1354, 1357, 1479, 2341
LweI GCATC 1 cut(s) 1807
MaeI CTAG 8 cut(s) 147, 332, 386, 678, 987, 1622, 1869, 2277
MaeII ACGT 4 cut(s) 21, 1096, 1441, 2301
MaeIII GTNAC 4 cut(s) 485, 510, 886, 1114
MfeI CAATTG 1 cut(s) 1266
MflI RGATCY 9 cut(s) 196, 265, 657, 787, 1317, 1805, 1871, 1981, 2348
MhlI GDGCHC 4 cut(s) 40, 949, 1054, 2264
Mly113I GGCGCC 1 cut(s) 2394
MlyI GAGTC 2 cut(s) 707, 1826
MmeI TCCRAC 1 cut(s) 1798
MroI TCCGGA 1 cut(s) 817
MslI CAYNNNNRTG 5 cut(s) 68, 629, 779, 2022, 2402
MspA1I CMGCKG 1 cut(s) 1286
MspI CCGG 4 cut(s) 230, 299, 710, 818
MspR9I CCNGG 4 cut(s) 413, 491, 1513, 1811
MunI CAATTG 1 cut(s) 1266
Mva1269I GAATGC 1 cut(s) 1181
MvaI CCWGG 4 cut(s) 413, 491, 1513, 1811
MwoI GCNNNNNNNGC 2 cut(s) 2279, 2391
NarI GGCGCC 1 cut(s) 2394
NdeI CATATG 1 cut(s) 1944
NheI GCTAGC 1 cut(s) 331
NlaIII CATG 9 cut(s) 616, 1009, 1014, 1327, 1430, 1730, 1798, 2171, 2194
NlaIV GGNNCC 8 cut(s) 37, 292, 659, 789, 1035, 1807, 2082, 2395
NmuCI GTSAC 2 cut(s) 485, 1114
NspI RCATGY 4 cut(s) 616, 1014, 1327, 2171
NspV TTCGAA 1 cut(s) 326
OliI CACNNNNGTG 1 cut(s) 68
PaeR7I CTCGAG 1 cut(s) 2183
PagI TCATGA 1 cut(s) 1426
PaqCI CACCTGC 1 cut(s) 23
PceI AGGCCT 1 cut(s) 2287
PciI ACATGT 4 cut(s) 612, 1010, 1323, 2167
PctI GAATGC 1 cut(s) 1181
PfeI GAWTC 3 cut(s) 49, 60, 391
PkrI GCNGC 6 cut(s) 758, 772, 1369, 1372, 1494, 2356
PleI GAGTC 2 cut(s) 707, 1826
PluTI GGCGCC 1 cut(s) 2397
PmaCI CACGTG 1 cut(s) 22
PmlI CACGTG 1 cut(s) 22
PpsI GAGTC 2 cut(s) 707, 1826
Ppu21I YACGTR 2 cut(s) 22, 1097
PscI ACATGT 4 cut(s) 612, 1010, 1323, 2167
Psp124BI GAGCTC 1 cut(s) 1054
Psp6I CCWGG 4 cut(s) 411, 489, 1511, 1809
PspCI CACGTG 1 cut(s) 22
PspGI CCWGG 4 cut(s) 411, 489, 1511, 1809
PspN4I GGNNCC 8 cut(s) 37, 292, 659, 789, 1035, 1807, 2082, 2395
PspPI GGNCC 5 cut(s) 8, 143, 1253, 1382, 2407
PstNI CAGNNNCTG 2 cut(s) 262, 776
PsuI RGATCY 9 cut(s) 196, 265, 657, 787, 1317, 1805, 1871, 1981, 2348
PvuII CAGCTG 1 cut(s) 1286
RsaI GTAC 4 cut(s) 723, 1079, 1328, 2172
RsaNI GTAC 4 cut(s) 722, 1078, 1327, 2171
RseI CAYNNNNRTG 5 cut(s) 68, 629, 779, 2022, 2402
SacI GAGCTC 1 cut(s) 1054
SalI GTCGAC 1 cut(s) 1829
SatI GCNGC 6 cut(s) 757, 771, 1368, 1371, 1493, 2355
Sau96I GGNCC 5 cut(s) 8, 143, 1253, 1382, 2407
ScaI AGTACT 1 cut(s) 1079
SchI GAGTC 2 cut(s) 707, 1826
ScrFI CCNGG 4 cut(s) 413, 491, 1513, 1811
SduI GDGCHC 4 cut(s) 40, 949, 1054, 2264
SfaNI GCATC 1 cut(s) 1807
SfcI CTRYAG 1 cut(s) 1641
SfoI GGCGCC 1 cut(s) 2395
Sfr274I CTCGAG 1 cut(s) 2183
SfuI TTCGAA 1 cut(s) 326
SinI GGWCC 5 cut(s) 8, 143, 1253, 1382, 2407
SlaI CTCGAG 1 cut(s) 2183
SmiMI CAYNNNNRTG 5 cut(s) 68, 629, 779, 2022, 2402
SmlI CTYRAG 5 cut(s) 553, 1073, 1121, 1985, 2183
SmoI CTYRAG 5 cut(s) 553, 1073, 1121, 1985, 2183
SpeI ACTAGT 2 cut(s) 385, 677
SseBI AGGCCT 1 cut(s) 2287
SsiI CCGC 3 cut(s) 66, 478, 768
SspDI GGCGCC 1 cut(s) 2393
SspI AATATT 1 cut(s) 1966
SspMI CTAG 8 cut(s) 147, 332, 386, 678, 987, 1622, 1869, 2277
SstI GAGCTC 1 cut(s) 1054
StuI AGGCCT 1 cut(s) 2287
StyD4I CCNGG 4 cut(s) 411, 489, 1511, 1809
StyI CCWWGG 1 cut(s) 375
TaaI ACNGT 7 cut(s) 405, 670, 815, 857, 877, 1642, 1828
TaiI ACGT 4 cut(s) 24, 1099, 1444, 2304
TaqI TCGA 7 cut(s) 58, 90, 326, 1185, 1749, 1830, 2184
TatI WGTACW 3 cut(s) 1077, 1326, 2170
TfiI GAWTC 3 cut(s) 49, 60, 391
TscAI CASTG 6 cut(s) 781, 1150, 1464, 1591, 2259, 2392
TseFI GTSAC 2 cut(s) 485, 1114
TseI GCWGC 6 cut(s) 756, 770, 1367, 1370, 1492, 2354
Tsp45I GTSAC 2 cut(s) 485, 1114
TspGWI ACGGA 3 cut(s) 17, 1393, 1818
TspRI CASTG 6 cut(s) 781, 1150, 1464, 1591, 2259, 2392
VneI GTGCAC 1 cut(s) 2260
VpaK11BI GGWCC 5 cut(s) 8, 143, 1253, 1382, 2407
XapI RAATTY 6 cut(s) 134, 1415, 1422, 1853, 2101, 2203
XceI RCATGY 4 cut(s) 616, 1014, 1327, 2171
XcmI CCANNNNNNNNNTGG 2 cut(s) 939, 1882
XhoI CTCGAG 1 cut(s) 2183
XmiI GTMKAC 4 cut(s) 1093, 1140, 1346, 1830
XspI CTAG 8 cut(s) 147, 332, 386, 678, 987, 1622, 1869, 2277
ZrmI AGTACT 1 cut(s) 1079
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.