Rh5AG009000

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000236
Physical Location & Seq
Reverse (-)
617574 .. 628331
10758 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG009000.1

Sequence Viewer

Length: 1707 bp
ATGGCTTTGAGATTCATTCGGAGTGAACTACGGGCTAAAGGTTTGACCGGATTTATTCCTGAAGAACTAGCCAATCTCACATATCTGAAGACACTGGATCTCAGTAAGAATCAATTGACTGGTTTTATACCTGCTAGCTTGGGGAATTTATCTATGCTCAGCACCCTGGATCTTCAGGAAAATCAATTGACTGGACCCATTCCAGCGAGTCTGGGGAATATGAAATTTGAAGTATTCAACCGTACATGTTTGTGCAACGAATCTTCTCCGCCGGGCATCAGTGTTGACTTCAGACTGGATCTTTCATACAATCAATTAAATGGATCCATACCAGCCACTTTAGGAAATGTGAGGGTCTCTTCAGTGACATCTGATCCAAATGCCTACCAGTGGTTCAAGCTTAAGCAATATGACAGGGCTAATGTCCACTCAGACTTCACCCTGGATCTTTCAAACAATCAACTGACTGGGGCGATACCAGAGAGCTTAGGGAATTTGACTTTTGCCAAGTATATTCGTCTGCATGCCAACTTTCTCAACGGCTCTATACCAGCAACTTTGGGTGCATTGACAGATCTCTGGTCACTGCGTTTGCATGACAATGGAATATCTGGTACTCTCCCACAAACACTTGGAAATTTGACAAACCTTTCATACCTCACGGTCGGATCCAACAGTATCACTGGGACAATACCAAAAAGTTTTGCCAGACTTGAGAGCCTGACTGTATTTTCTGTAGATGGTAACTATTTGTCTGGCCCTTTACCTGACTTCATAGTCAACTGGACTTCAATCTATGATCTTATTCTCAACGGAAACAATTTCCGCGGAAAGATACCTACCGGAATTTTTAATTTATCAAATCTACAAATTTTGGCAATAAGTGATGCAGCAGACTCTCATTTCCAGTTCCCACCGCCTAAACATATGACGAAAAACTTCAATATTTTGTTTGGTGAGAGGAAACTAAAGGATTTCAACATTATAGACAAGGTAGGACGTCCCAACGACGTATATCAAGAAGATTTCACGGCTGTAGTAAATGATGGTACATTAGAGATTCACTTCTACTCAGCTGGAAAAGGGCTTGATCAGGGACCTCTCATATCTGCTATATCCGTAACTCCAGAGTACAAGCTACGCAAACAACTATCTCCTCTGCACATAGCGCTCATTACTGTGGCTTCAATCATAGTTTTTGTGTTGCTTTTATTGCTTTTTGCCTGGATGATGGGATGGCTGGGTACAGATCACTTACATGAAATAGATATAGGTCTAGAAAAGCCTGTCACCCTCAAACAATTAAAAGATGCTACTCGGAATTTTAGCAAGAGGAACGAGATTGGTCAAGGGGGTTTTGGGACCGTTTACAAGGCTTATGATTTACAGCAAAAAGGAAGGCTGGTGGACTTGGTTGACAAAACATTATCTACCAAGTATGATGCAAAACAAGCCATCATCATCTTGAATTTAGCAGTAAAGTGCACCAGTATATCCCCAACTCTGAGGCCTACTATGTCTGAAGTTGTGAGTGTACTCGTTGGCGACAAAAAAATTGAGGAGATTTGTCCCCCTGCTCCGAATGATAGTCAAACTGCTCAAGTTGATTCCTCTGTTTCTATCGAAGTAACCTCGAGAGCATCCACTTCATCCAATTTGATCAAAGGGGAAGATGAAACAGAACACATTTCTGTGGGTACCCCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 Malectin Pkinase Pkinase_Tyr

Protein Analysis

568

Amino Acids

62.3

Weight (kDa)

6.09

Isoelectric Point (pI)

31.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 20 - 63 4.8e-07 Leucine rich repeat
LRR_14 PF23598 148 - 245 2.6e-07 Leucine-rich repeat region
LRR_8 PF13855 195 - 251 6e-08 Leucine rich repeat
Malectin PF11721 311 - 372 1.7e-06 Malectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 776
AatII GACGTC 1 cut(s) 1003
Acc36I ACCTGC 1 cut(s) 139
Acc65I GGTACC 1 cut(s) 1697
AccB1I GGYRCC 1 cut(s) 1697
AccII CGCG 1 cut(s) 828
AciI CCGC 4 cut(s) 269, 826, 828, 917
AclWI GGATC 9 cut(s) 105, 177, 306, 318, 331, 368, 453, 663, 676
AcsI RAATTY 8 cut(s) 145, 224, 493, 637, 846, 870, 1321, 1468
AcuI CTGAAG 6 cut(s) 81, 107, 158, 274, 345, 1542
AcyI GRCGYC 1 cut(s) 1000
AfaI GTAC 7 cut(s) 244, 616, 1051, 1133, 1246, 1536, 1699
AfeI AGCGCT 1 cut(s) 1170
AfiI CCNNNNNNNGG 1 cut(s) 390
AflII CTTAAG 1 cut(s) 401
AflIII ACRYGT 1 cut(s) 245
AgsI TTSAA 9 cut(s) 230, 238, 397, 453, 792, 943, 979, 1188, 1468
AjnI CCWGG 3 cut(s) 165, 441, 1223
AluBI AGCT 5 cut(s) 138, 400, 486, 1076, 1138
AluI AGCT 5 cut(s) 138, 400, 486, 1076, 1138
Alw21I GWGCWC 1 cut(s) 1487
Alw26I GTCTC 1 cut(s) 361
Alw44I GTGCAC 1 cut(s) 1483
AlwI GGATC 9 cut(s) 105, 177, 306, 318, 331, 368, 453, 663, 676
Ama87I CYCGRG 1 cut(s) 1633
Aor51HI AGCGCT 1 cut(s) 1170
AoxI GGCC 2 cut(s) 757, 1508
ApaLI GTGCAC 1 cut(s) 1483
ApeKI GCWGC 1 cut(s) 890
ApoI RAATTY 8 cut(s) 145, 224, 493, 637, 846, 870, 1321, 1468
Asp700I GAANNNNTTC 1 cut(s) 938
Asp718I GGTACC 1 cut(s) 1697
AspLEI GCGC 1 cut(s) 1171
AspS9I GGNCC 4 cut(s) 194, 758, 1097, 1362
AsuC2I CCSGG 1 cut(s) 273
AsuHPI GGTGA 3 cut(s) 430, 968, 1282
AsuNHI GCTAGC 1 cut(s) 134
AvaI CYCGRG 1 cut(s) 1633
AvaII GGWCC 3 cut(s) 194, 1097, 1362
BaeGI GKGCMC 1 cut(s) 1487
BamHI GGATCC 2 cut(s) 323, 668
BanI GGYRCC 1 cut(s) 1697
BbsI GAAGAC 1 cut(s) 95
Bbv12I GWGCWC 1 cut(s) 1487
BbvI GCAGC 1 cut(s) 902
BccI CCATC 5 cut(s) 734, 1040, 1225, 1230, 1463
BceAI ACGGC 2 cut(s) 556, 1047
BciT130I CCWGG 3 cut(s) 167, 443, 1225
BclI TGATCA 2 cut(s) 1090, 1659
BcnI CCSGG 1 cut(s) 273
BcoDI GTCTC 1 cut(s) 361
BfaI CTAG 4 cut(s) 68, 135, 1277, 1705
BfmI CTRYAG 2 cut(s) 735, 1035
BfoI RGCGCY 1 cut(s) 1172
BfrI CTTAAG 1 cut(s) 401
BfuAI ACCTGC 1 cut(s) 139
BglII AGATCT 1 cut(s) 574
BisI GCNGC 1 cut(s) 891
BlpI GCTNAGC 1 cut(s) 158
BlsI GCNGC 1 cut(s) 892
Bme1390I CCNGG 4 cut(s) 167, 273, 443, 1225
Bme18I GGWCC 3 cut(s) 194, 1097, 1362
BmeT110I CYCGRG 1 cut(s) 1633
BmgT120I GGNCC 4 cut(s) 194, 758, 1097, 1362
BmiI GGNNCC 6 cut(s) 196, 325, 670, 1098, 1363, 1699
BmrFI CCNGG 4 cut(s) 167, 273, 443, 1225
BmrI ACTGGG 2 cut(s) 477, 693
BmsI GCATC 5 cut(s) 285, 877, 1300, 1432, 1649
BmtI GCTAGC 1 cut(s) 138
BmuI ACTGGG 2 cut(s) 477, 693
BpiI GAAGAC 1 cut(s) 95
BpmI CTGGAG 1 cut(s) 1110
Bpu10I CCTNAGC 1 cut(s) 487
Bpu1102I GCTNAGC 1 cut(s) 158
BpuEI CTTGAG 2 cut(s) 734, 1584
BpuMI CCSGG 1 cut(s) 273
BsaHI GRCGYC 1 cut(s) 1000
BsaI GGTCTC 1 cut(s) 361
BsaJI CCNNGG 3 cut(s) 165, 441, 826
BsaWI WCCGGW 2 cut(s) 47, 842
Bsc4I CCNNNNNNNGG 1 cut(s) 390
BseBI CCWGG 3 cut(s) 167, 443, 1225
BseDI CCNNGG 3 cut(s) 165, 441, 826
BseGI GGATG 4 cut(s) 1233, 1241, 1640, 1649
BseLI CCNNNNNNNGG 1 cut(s) 390
BseMII CTCAG 5 cut(s) 115, 172, 444, 1086, 1496
BseRI GAGGAG 2 cut(s) 1146, 1574
BseSI GKGCMC 1 cut(s) 1487
BseXI GCAGC 1 cut(s) 902
BseYI CCCAGC 1 cut(s) 1240
BsgI GTGCAG 1 cut(s) 1145
Bsh1236I CGCG 1 cut(s) 828
Bsh1285I CGRYCG 1 cut(s) 666
BshFI GGCC 2 cut(s) 759, 1510
BshNI GGYRCC 1 cut(s) 1697
BsiEI CGRYCG 1 cut(s) 666
BsiHKAI GWGCWC 1 cut(s) 1487
BsiHKCI CYCGRG 1 cut(s) 1633
BsiSI CCGG 3 cut(s) 48, 272, 843
BslFI GGGAC 5 cut(s) 700, 987, 1110, 1375, 1554
BslI CCNNNNNNNGG 1 cut(s) 390
BsmAI GTCTC 1 cut(s) 361
BsmFI GGGAC 5 cut(s) 700, 987, 1110, 1375, 1554
BsnI GGCC 2 cut(s) 759, 1510
Bso31I GGTCTC 1 cut(s) 361
BsoBI CYCGRG 1 cut(s) 1633
Bsp1286I GDGCHC 1 cut(s) 1487
Bsp1720I GCTNAGC 1 cut(s) 158
BspACI CCGC 4 cut(s) 269, 826, 828, 917
BspANI GGCC 2 cut(s) 759, 1510
BspCNI CTCAG 5 cut(s) 114, 171, 443, 1085, 1497
BspFNI CGCG 1 cut(s) 828
BspLI GGNNCC 6 cut(s) 196, 325, 670, 1098, 1363, 1699
BspMI ACCTGC 1 cut(s) 139
BspOI GCTAGC 1 cut(s) 138
BspPI GGATC 9 cut(s) 105, 177, 306, 318, 331, 368, 453, 663, 676
BspT107I GGYRCC 1 cut(s) 1697
BspTI CTTAAG 1 cut(s) 401
BspTNI GGTCTC 1 cut(s) 361
BssECI CCNNGG 3 cut(s) 165, 441, 826
BssNI GRCGYC 1 cut(s) 1000
Bst2UI CCWGG 3 cut(s) 167, 443, 1225
Bst4CI ACNGT 6 cut(s) 242, 664, 677, 727, 1180, 1366
Bst6I CTCTTC 1 cut(s) 364
BstACI GRCGYC 1 cut(s) 1000
BstAFI CTTAAG 1 cut(s) 401
BstC8I GCNNGC 2 cut(s) 136, 525
BstDEI CTNAG 6 cut(s) 101, 158, 430, 487, 1072, 1505
BstDSI CCRYGG 1 cut(s) 826
BstF5I GGATG 4 cut(s) 1233, 1241, 1640, 1649
BstFNI CGCG 1 cut(s) 828
BstH2I RGCGCY 1 cut(s) 1172
BstHHI GCGC 1 cut(s) 1171
BstMAI GTCTC 1 cut(s) 361
BstMCI CGRYCG 1 cut(s) 666
BstMWI GCNNNNNNNGC 3 cut(s) 1168, 1213, 1451
BstNI CCWGG 3 cut(s) 167, 443, 1225
BstNSI RCATGY 2 cut(s) 249, 527
BstSCI CCNGG 4 cut(s) 165, 271, 441, 1223
BstSFI CTRYAG 2 cut(s) 735, 1035
BstSLI GKGCMC 1 cut(s) 1487
BstUI CGCG 1 cut(s) 828
BstV1I GCAGC 1 cut(s) 902
BstV2I GAAGAC 1 cut(s) 95
BstX2I RGATCY 7 cut(s) 97, 169, 298, 323, 445, 574, 668
BstYI RGATCY 7 cut(s) 97, 169, 298, 323, 445, 574, 668
BsuRI GGCC 2 cut(s) 759, 1510
BtgI CCRYGG 1 cut(s) 826
BtsCI GGATG 4 cut(s) 1233, 1241, 1640, 1649
BtsI GCAGTG 1 cut(s) 584
BtsIMutI CAGTG 6 cut(s) 92, 286, 369, 395, 584, 681
BveI ACCTGC 1 cut(s) 139
Cac8I GCNNGC 2 cut(s) 136, 525
CfoI GCGC 1 cut(s) 1171
Cfr13I GGNCC 4 cut(s) 194, 758, 1097, 1362
Cfr42I CCGCGG 1 cut(s) 829
Csp6I GTAC 7 cut(s) 243, 615, 1050, 1132, 1245, 1535, 1698
CviAII CATG 4 cut(s) 246, 524, 596, 1259
CviQI GTAC 7 cut(s) 243, 615, 1050, 1132, 1245, 1535, 1698
DdeI CTNAG 6 cut(s) 101, 158, 430, 487, 1072, 1505
DrdI GACNNNNNNGTC 1 cut(s) 776
DseDI GACNNNNNNGTC 1 cut(s) 776
Eam1104I CTCTTC 1 cut(s) 364
EarI CTCTTC 1 cut(s) 364
EciI GGCGGA 1 cut(s) 258
Eco147I AGGCCT 1 cut(s) 1510
Eco31I GGTCTC 1 cut(s) 361
Eco47I GGWCC 3 cut(s) 194, 1097, 1362
Eco47III AGCGCT 1 cut(s) 1170
Eco57I CTGAAG 6 cut(s) 81, 107, 158, 274, 345, 1542
Eco88I CYCGRG 1 cut(s) 1633
EcoO109I RGGNCCY 1 cut(s) 1097
EcoRII CCWGG 3 cut(s) 165, 441, 1223
FaeI CATG 4 cut(s) 249, 527, 599, 1262
FaqI GGGAC 5 cut(s) 700, 987, 1110, 1375, 1554
FatI CATG 4 cut(s) 245, 523, 595, 1258
FauNDI CATATG 1 cut(s) 927
FbaI TGATCA 2 cut(s) 1090, 1659
Fnu4HI GCNGC 1 cut(s) 891
FokI GGATG 4 cut(s) 1240, 1248, 1627, 1636
Fsp4HI GCNGC 1 cut(s) 891
FspBI CTAG 4 cut(s) 68, 135, 1277, 1705
GlaI GCGC 1 cut(s) 1170
GluI GCNGC 1 cut(s) 891
GsaI CCCAGC 1 cut(s) 1244
GsuI CTGGAG 1 cut(s) 1110
HaeII RGCGCY 1 cut(s) 1172
HaeIII GGCC 2 cut(s) 759, 1510
HapII CCGG 3 cut(s) 48, 272, 843
HhaI GCGC 1 cut(s) 1171
Hin1I GRCGYC 1 cut(s) 1000
Hin1II CATG 4 cut(s) 249, 527, 599, 1262
Hin6I GCGC 1 cut(s) 1169
HinP1I GCGC 1 cut(s) 1169
HincII GTYRAC 3 cut(s) 286, 781, 1417
HindII GTYRAC 3 cut(s) 286, 781, 1417
HindIII AAGCTT 1 cut(s) 398
HinfI GANTC 7 cut(s) 12, 109, 208, 260, 896, 1060, 1607
HpaII CCGG 3 cut(s) 48, 272, 843
HphI GGTGA 3 cut(s) 430, 968, 1282
Hpy166II GTNNAC 9 cut(s) 26, 286, 427, 781, 1369, 1408, 1417, 1485, 1535
Hpy188III TCNNGA 7 cut(s) 59, 176, 1019, 1127, 1277, 1465, 1635
Hpy8I GTNNAC 9 cut(s) 26, 286, 427, 781, 1369, 1408, 1417, 1485, 1535
Hpy99I CGWCG 1 cut(s) 1013
HpyAV CCTTC 1 cut(s) 1392
HpyCH4III ACNGT 6 cut(s) 242, 664, 677, 727, 1180, 1366
HpyCH4IV ACGT 2 cut(s) 1000, 1011
HpyCH4V TGCA 8 cut(s) 255, 523, 566, 595, 890, 1162, 1445, 1485
HpyF10VI GCNNNNNNNGC 3 cut(s) 1168, 1213, 1451
HpyF3I CTNAG 6 cut(s) 101, 158, 430, 487, 1072, 1505
HpySE526I ACGT 2 cut(s) 1000, 1011
Hsp92I GRCGYC 1 cut(s) 1000
Hsp92II CATG 4 cut(s) 249, 527, 599, 1262
HspAI GCGC 1 cut(s) 1169
KpnI GGTACC 1 cut(s) 1701
Ksp22I TGATCA 2 cut(s) 1090, 1659
KspI CCGCGG 1 cut(s) 829
LmnI GCTCC 1 cut(s) 1582
Lsp1109I GCAGC 1 cut(s) 902
LweI GCATC 5 cut(s) 285, 877, 1300, 1432, 1649
MaeI CTAG 4 cut(s) 68, 135, 1277, 1705
MaeII ACGT 2 cut(s) 1000, 1011
MaeIII GTNAC 6 cut(s) 364, 582, 743, 1120, 1288, 1627
MboII GAAGA 7 cut(s) 74, 100, 164, 255, 351, 1034, 1682
MfeI CAATTG 2 cut(s) 113, 185
MflI RGATCY 7 cut(s) 97, 169, 298, 323, 445, 574, 668
MhlI GDGCHC 1 cut(s) 1487
MlyI GAGTC 2 cut(s) 217, 890
MmeI TCCRAC 2 cut(s) 646, 696
MroXI GAANNNNTTC 1 cut(s) 938
MseI TTAA 4 cut(s) 317, 402, 852, 1304
MslI CAYNNNNRTG 5 cut(s) 250, 600, 1178, 1257, 1691
MspA1I CMGCKG 2 cut(s) 828, 1076
MspCI CTTAAG 1 cut(s) 401
MspI CCGG 3 cut(s) 48, 272, 843
MspR9I CCNGG 4 cut(s) 167, 273, 443, 1225
MunI CAATTG 2 cut(s) 113, 185
MvaI CCWGG 3 cut(s) 167, 443, 1225
MvnI CGCG 1 cut(s) 828
MwoI GCNNNNNNNGC 3 cut(s) 1168, 1213, 1451
NciI CCSGG 1 cut(s) 273
NdeI CATATG 1 cut(s) 927
NheI GCTAGC 1 cut(s) 134
NlaIII CATG 4 cut(s) 249, 527, 599, 1262
NlaIV GGNNCC 6 cut(s) 196, 325, 670, 1098, 1363, 1699
NmuCI GTSAC 3 cut(s) 364, 582, 1288
NspI RCATGY 2 cut(s) 249, 527
PaeI GCATGC 1 cut(s) 527
PaeR7I CTCGAG 1 cut(s) 1633
PceI AGGCCT 1 cut(s) 1510
PciI ACATGT 1 cut(s) 245
PdmI GAANNNNTTC 1 cut(s) 938
PfeI GAWTC 5 cut(s) 12, 109, 260, 1060, 1607
PkrI GCNGC 1 cut(s) 892
PleI GAGTC 2 cut(s) 216, 890
PpsI GAGTC 2 cut(s) 216, 890
PpuMI RGGWCCY 1 cut(s) 1097
PscI ACATGT 1 cut(s) 245
Psp5II RGGWCCY 1 cut(s) 1097
Psp6I CCWGG 3 cut(s) 165, 441, 1223
PspFI CCCAGC 1 cut(s) 1240
PspGI CCWGG 3 cut(s) 165, 441, 1223
PspN4I GGNNCC 6 cut(s) 196, 325, 670, 1098, 1363, 1699
PspPI GGNCC 4 cut(s) 194, 758, 1097, 1362
PspPPI RGGWCCY 1 cut(s) 1097
PsuI RGATCY 7 cut(s) 97, 169, 298, 323, 445, 574, 668
PvuII CAGCTG 1 cut(s) 1076
RsaI GTAC 7 cut(s) 244, 616, 1051, 1133, 1246, 1536, 1699
RsaNI GTAC 7 cut(s) 243, 615, 1050, 1132, 1245, 1535, 1698
RseI CAYNNNNRTG 5 cut(s) 250, 600, 1178, 1257, 1691
SacII CCGCGG 1 cut(s) 829
SaqAI TTAA 4 cut(s) 317, 402, 852, 1304
SatI GCNGC 1 cut(s) 891
Sau96I GGNCC 4 cut(s) 194, 758, 1097, 1362
SchI GAGTC 2 cut(s) 217, 890
ScrFI CCNGG 4 cut(s) 167, 273, 443, 1225
SduI GDGCHC 1 cut(s) 1487
SfaNI GCATC 5 cut(s) 285, 877, 1300, 1432, 1649
SfcI CTRYAG 2 cut(s) 735, 1035
Sfr274I CTCGAG 1 cut(s) 1633
Sfr303I CCGCGG 1 cut(s) 829
SgrBI CCGCGG 1 cut(s) 829
SinI GGWCC 3 cut(s) 194, 1097, 1362
SlaI CTCGAG 1 cut(s) 1633
SmiMI CAYNNNNRTG 5 cut(s) 250, 600, 1178, 1257, 1691
SmlI CTYRAG 4 cut(s) 401, 713, 1599, 1633
SmoI CTYRAG 4 cut(s) 401, 713, 1599, 1633
SphI GCATGC 1 cut(s) 527
SseBI AGGCCT 1 cut(s) 1510
SsiI CCGC 4 cut(s) 269, 826, 828, 917
SspI AATATT 1 cut(s) 946
SspMI CTAG 4 cut(s) 68, 135, 1277, 1705
StuI AGGCCT 1 cut(s) 1510
StyD4I CCNGG 4 cut(s) 165, 271, 441, 1223
TaaI ACNGT 6 cut(s) 242, 664, 677, 727, 1180, 1366
TaiI ACGT 2 cut(s) 1003, 1014
TaqI TCGA 2 cut(s) 1623, 1634
TatI WGTACW 2 cut(s) 1131, 1534
TfiI GAWTC 5 cut(s) 12, 109, 260, 1060, 1607
Tru1I TTAA 4 cut(s) 317, 402, 852, 1304
Tru9I TTAA 4 cut(s) 317, 402, 852, 1304
TscAI CASTG 6 cut(s) 99, 286, 369, 395, 591, 688
TseFI GTSAC 3 cut(s) 364, 582, 1288
TseI GCWGC 1 cut(s) 890
Tsp45I GTSAC 3 cut(s) 364, 582, 1288
TspDTI ATGAA 8 cut(s) 4, 236, 294, 642, 763, 1275, 1638, 1689
TspGWI ACGGA 2 cut(s) 828, 1108
TspRI CASTG 6 cut(s) 99, 286, 369, 395, 591, 688
Vha464I CTTAAG 1 cut(s) 401
VneI GTGCAC 1 cut(s) 1483
VpaK11BI GGWCC 3 cut(s) 194, 1097, 1362
XapI RAATTY 8 cut(s) 145, 224, 493, 637, 846, 870, 1321, 1468
XbaI TCTAGA 1 cut(s) 1276
XceI RCATGY 2 cut(s) 249, 527
XhoI CTCGAG 1 cut(s) 1633
XmnI GAANNNNTTC 1 cut(s) 938
XspI CTAG 4 cut(s) 68, 135, 1277, 1705
ZraI GACGTC 1 cut(s) 1001
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.