Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0000236

Physical Location & Seq

Genomic Coordinates Reverse (-)

926853 .. 939792

Gene Structure 12940 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG012200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1296 bp

ATGGGTGCTGAAGCTTCAGCAAGACTTGTTAGTGAACTTGTAATTCTATGCCTCATCTCTACTCTTTGTCTGCAGCTTGGATCTGAATTCAAATATCAGAGTATAGCTGAAACGTTGCCCGAGTTGCCCACAGAAGAAGTGAGAGCTCTTTATGAAATAGCATATCAGTTGGGGTTAAACACTGAAAAGTTATCTGGAGGCTCAATTTGCACGGAGAGAAGCTATGAAATCAAATGTAACTGCAGTTTTGAAAACAACACCATTTGCCACATCATAGAAATTGCATTGATTGGCAGCGGTTTGACTGGAGTTATACCTAAAGAACTGGCCAATCTCACACATCTGGAGAGCCTGAATCTCCAGAAAAATCAATTGACTGGTTCCATACCTGCTAGCTTGGGGAATTTATCTTTGCTCCACAGCCTGGATCTTTCGGACAATCAATTGATCGGACCCATTCCAGCAAGTTTGGGGAATTTAAAATTTAAAGCAAAAAGAGAAAATTACAGGTATGATAGGAAGCTGCAGGCCACTAGGCCCACCGCAGGGGCAGCCGTACGTTGCGGCGGCAAAGGCTTTCCACCATGCCATACGAGCGGCGCCGCCGGTCGGGCCGGTCTAACACTGGATCTTTCAAGCAATCAGTTGAGTGGACCTATACCAGCCACTTTAGGGAATCTGGCCATCCTACCGGCTGATGCCGAGATTGCCGACGACCTAACGATCTACCTGGATCTTTCCAACAATCAACTGATTGGGCCTATACCACAGAGTTTAGGGAATTTGACTTTGGCCGGTTCTATTGATCTGCATGATAACTTTCTCAACGGCTCTATACCAGCATCTTTGGGTGCATTGACTCATTTGTATAGACTGGATTTGCATAACAATGGAATCTCTGGTATTCTCCCACGAAGACTTGGAAATTTGACAAAGCTTCGAACCTTCGACGTCGCATCCAACAGTATTACTGGGACATTACCAAACAAATTCGCCAGCCTTAAGAACCTGACTGAATTTTCTGTAGCTGGTAACTATTTGTCTGGCCCTTTACCTGACTTCATAGCCAACTGGACTTCAATCTGGGAACTTTATCTCAGCGGAAACAATTTTCTCGGAATTCTACCTGCCGGAATTTTTAATTTATCAGATCTAGAAATTTTGGCAATAAGTGATGTCGGAGCAAACTCTCATTTCCAGTTCCCACCATCAACACATGTGACGACAAGTTTTCGTATTTTGTTAGTAAATTGTTTGTTGCACATAATATGTTACTTCGATCAAAAAACTATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRR_1 LRR_8 Malectin Pkinase Pkinase_Tyr

Protein Analysis

431

Amino Acids

46.28

Weight (kDa)

5.69

Isoelectric Point (pI)

32.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	99 - 149	1.7e-06	Leucine rich repeat
LRR_4	PF12799	113 - 154	8.3e-06	Leucine Rich repeats (2 copies)
LRR_14	PF23598	281 - 367	8.5e-08	Leucine-rich repeat region
LRR_8	PF13855	288 - 347	1.8e-08	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000236)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica	MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica	Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis	pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis	RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata	RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora	Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa	Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha	Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana	Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	954
Acc36I	ACCTGC	2 cut(s)	397, 1135
AccB1I	GGYRCC	1 cut(s)	599
AccB7I	CCANNNNNTGG	1 cut(s)	424
AccBSI	CCGCTC	1 cut(s)	597
AciI	CCGC	7 cut(s)	297, 543, 564, 567, 597, 603, 1101
AclI	AACGTT	1 cut(s)	113
AclWI	GGATC	4 cut(s)	88, 435, 636, 741
AcoI	YGGCCR	3 cut(s)	327, 681, 792
AcuI	CTGAAG	1 cut(s)	30
AcyI	GRCGYC	2 cut(s)	600, 951
AfaI	GTAC	1 cut(s)	558
AfiI	CCNNNNNNNGG	5 cut(s)	424, 545, 546, 609, 672
AflII	CTTAAG	1 cut(s)	1001
AflIII	ACRYGT	1 cut(s)	1216
AgsI	TTSAA	4 cut(s)	91, 251, 636, 1080
AjnI	CCWGG	2 cut(s)	423, 729
AjuI	GAANNNNNNNTTGG	2 cut(s)	773, 805
AluBI	AGCT	9 cut(s)	14, 76, 107, 146, 222, 396, 523, 937, 1028
AluI	AGCT	9 cut(s)	14, 76, 107, 146, 222, 396, 523, 937, 1028
Alw21I	GWGCWC	1 cut(s)	148
AlwI	GGATC	4 cut(s)	88, 435, 636, 741
Ama87I	CYCGRG	1 cut(s)	119
AoxI	GGCC	8 cut(s)	327, 528, 536, 612, 681, 758, 792, 1045
ApeKI	GCWGC	4 cut(s)	73, 294, 523, 551
AspLEI	GCGC	1 cut(s)	602
AspS9I	GGNCC	6 cut(s)	452, 537, 612, 653, 758, 1046
AsuII	TTCGAA	1 cut(s)	940
AsuNHI	GCTAGC	1 cut(s)	392
AvaI	CYCGRG	1 cut(s)	119
AvaII	GGWCC	2 cut(s)	452, 653
BalI	TGGCCA	2 cut(s)	329, 683
BanI	GGYRCC	1 cut(s)	599
BanII	GRGCYC	1 cut(s)	148
BbsI	GAAGAC	1 cut(s)	922
Bbv12I	GWGCWC	1 cut(s)	148
BbvI	GCAGC	4 cut(s)	85, 306, 510, 563
BccI	CCATC	2 cut(s)	692, 1216
BceAI	ACGGC	2 cut(s)	539, 844
BciT130I	CCWGG	2 cut(s)	425, 731
BfaI	CTAG	3 cut(s)	393, 534, 1154
BfmI	CTRYAG	4 cut(s)	71, 241, 524, 1023
BfoI	RGCGCY	1 cut(s)	603
BfrI	CTTAAG	1 cut(s)	1001
BfuAI	ACCTGC	2 cut(s)	397, 1135
BglI	GCCNNNNNGGC	1 cut(s)	611
BglII	AGATCT	1 cut(s)	1150
BisI	GCNGC	8 cut(s)	74, 295, 524, 552, 565, 568, 598, 603
BlsI	GCNGC	8 cut(s)	75, 296, 525, 553, 566, 569, 599, 604
Bme1390I	CCNGG	2 cut(s)	425, 731
Bme18I	GGWCC	2 cut(s)	452, 653
BmeT110I	CYCGRG	1 cut(s)	119
BmgT120I	GGNCC	6 cut(s)	452, 537, 612, 653, 758, 1046
BmiI	GGNNCC	3 cut(s)	382, 454, 601
BmrFI	CCNGG	2 cut(s)	425, 731
BmrI	ACTGGG	1 cut(s)	981
BmsI	GCATC	3 cut(s)	688, 851, 965
BmtI	GCTAGC	1 cut(s)	396
BmuI	ACTGGG	1 cut(s)	981
BpiI	GAAGAC	1 cut(s)	922
BpmI	CTGGAG	4 cut(s)	216, 327, 344, 365
Bpu14I	TTCGAA	1 cut(s)	940
BsaHI	GRCGYC	2 cut(s)	600, 951
Bsc4I	CCNNNNNNNGG	5 cut(s)	424, 545, 546, 609, 672
Bse118I	RCCGGY	4 cut(s)	605, 614, 691, 794
Bse1I	ACTGG	8 cut(s)	310, 330, 382, 630, 879, 976, 1076, 1198
BseBI	CCWGG	2 cut(s)	425, 731
BseGI	GGATG	2 cut(s)	684, 956
BseLI	CCNNNNNNNGG	5 cut(s)	424, 545, 546, 609, 672
BseMII	CTCAG	1 cut(s)	1111
BseNI	ACTGG	8 cut(s)	310, 330, 382, 630, 879, 976, 1076, 1198
BseXI	GCAGC	4 cut(s)	85, 306, 510, 563
Bsh1285I	CGRYCG	1 cut(s)	610
BshFI	GGCC	8 cut(s)	329, 530, 538, 614, 683, 760, 794, 1047
BshNI	GGYRCC	1 cut(s)	599
BsiEI	CGRYCG	1 cut(s)	610
BsiHKAI	GWGCWC	1 cut(s)	148
BsiHKCI	CYCGRG	1 cut(s)	119
BsiSI	CCGG	5 cut(s)	606, 615, 692, 795, 1131
BsiWI	CGTACG	1 cut(s)	556
BslFI	GGGAC	1 cut(s)	988
BslI	CCNNNNNNNGG	5 cut(s)	424, 545, 546, 609, 672
BsmFI	GGGAC	1 cut(s)	988
BsnI	GGCC	8 cut(s)	329, 530, 538, 614, 683, 760, 794, 1047
BsoBI	CYCGRG	1 cut(s)	119
Bsp119I	TTCGAA	1 cut(s)	940
Bsp1286I	GDGCHC	1 cut(s)	148
Bsp143I	GATC	9 cut(s)	80, 427, 447, 628, 723, 733, 805, 1150, 1279
BspACI	CCGC	7 cut(s)	297, 543, 564, 567, 597, 603, 1101
BspANI	GGCC	8 cut(s)	329, 530, 538, 614, 683, 760, 794, 1047
BspCNI	CTCAG	1 cut(s)	1110
BspLI	GGNNCC	3 cut(s)	382, 454, 601
BspMAI	CTGCAG	3 cut(s)	75, 245, 528
BspMI	ACCTGC	2 cut(s)	397, 1135
BspOI	GCTAGC	1 cut(s)	396
BspPI	GGATC	4 cut(s)	88, 435, 636, 741
BspT104I	TTCGAA	1 cut(s)	940
BspT107I	GGYRCC	1 cut(s)	599
BspTI	CTTAAG	1 cut(s)	1001
BsrBI	CCGCTC	1 cut(s)	597
BsrFI	RCCGGY	4 cut(s)	605, 614, 691, 794
BsrI	ACTGG	8 cut(s)	310, 330, 382, 630, 879, 976, 1076, 1198
BssAI	RCCGGY	4 cut(s)	605, 614, 691, 794
BssMI	GATC	9 cut(s)	80, 427, 447, 628, 723, 733, 805, 1150, 1279
BssNI	GRCGYC	2 cut(s)	600, 951
Bst2UI	CCWGG	2 cut(s)	425, 731
Bst4CI	ACNGT	1 cut(s)	965
BstACI	GRCGYC	2 cut(s)	600, 951
BstAFI	CTTAAG	1 cut(s)	1001
BstBI	TTCGAA	1 cut(s)	940
BstC8I	GCNNGC	3 cut(s)	394, 528, 997
BstDEI	CTNAG	1 cut(s)	1097
BstF5I	GGATG	2 cut(s)	684, 956
BstH2I	RGCGCY	1 cut(s)	603
BstHHI	GCGC	1 cut(s)	602
BstKTI	GATC	9 cut(s)	83, 430, 450, 631, 726, 736, 808, 1153, 1282
BstMBI	GATC	9 cut(s)	80, 427, 447, 628, 723, 733, 805, 1150, 1279
BstMCI	CGRYCG	1 cut(s)	610
BstMWI	GCNNNNNNNGC	7 cut(s)	124, 207, 551, 573, 594, 611, 707
BstNI	CCWGG	2 cut(s)	425, 731
BstNSI	RCATGY	1 cut(s)	1220
BstSCI	CCNGG	2 cut(s)	423, 729
BstSFI	CTRYAG	4 cut(s)	71, 241, 524, 1023
BstV1I	GCAGC	4 cut(s)	85, 306, 510, 563
BstV2I	GAAGAC	1 cut(s)	922
BstX2I	RGATCY	5 cut(s)	80, 427, 628, 733, 1150
BstYI	RGATCY	5 cut(s)	80, 427, 628, 733, 1150
BsuRI	GGCC	8 cut(s)	329, 530, 538, 614, 683, 760, 794, 1047
BtsCI	GGATG	2 cut(s)	684, 956
BtsIMutI	CAGTG	2 cut(s)	180, 623
BveI	ACCTGC	2 cut(s)	397, 1135
Cac8I	GCNNGC	3 cut(s)	394, 528, 997
CfoI	GCGC	1 cut(s)	602
Cfr10I	RCCGGY	4 cut(s)	605, 614, 691, 794
Cfr13I	GGNCC	6 cut(s)	452, 537, 612, 653, 758, 1046
Csp6I	GTAC	1 cut(s)	557
CviAII	CATG	3 cut(s)	585, 812, 1217
CviQI	GTAC	1 cut(s)	557
DdeI	CTNAG	1 cut(s)	1097
DinI	GGCGCC	1 cut(s)	601
DpnI	GATC	9 cut(s)	82, 429, 449, 630, 725, 735, 807, 1152, 1281
DpnII	GATC	9 cut(s)	80, 427, 447, 628, 723, 733, 805, 1150, 1279
DraI	TTTAAA	2 cut(s)	480, 487
EaeI	YGGCCR	3 cut(s)	327, 681, 792
Ecl136II	GAGCTC	1 cut(s)	146
Eco24I	GRGCYC	1 cut(s)	148
Eco47I	GGWCC	2 cut(s)	452, 653
Eco53kI	GAGCTC	1 cut(s)	146
Eco57I	CTGAAG	1 cut(s)	30
Eco88I	CYCGRG	1 cut(s)	119
EcoICRI	GAGCTC	1 cut(s)	146
EcoRI	GAATTC	2 cut(s)	86, 1119
EcoRII	CCWGG	2 cut(s)	423, 729
EcoT38I	GRGCYC	1 cut(s)	148
EgeI	GGCGCC	1 cut(s)	601
EheI	GGCGCC	1 cut(s)	601
FaeI	CATG	3 cut(s)	588, 815, 1220
FaqI	GGGAC	1 cut(s)	988
FatI	CATG	3 cut(s)	584, 811, 1216
Fnu4HI	GCNGC	8 cut(s)	74, 295, 524, 552, 565, 568, 598, 603
FokI	GGATG	2 cut(s)	671, 943
FriOI	GRGCYC	1 cut(s)	148
Fsp4HI	GCNGC	8 cut(s)	74, 295, 524, 552, 565, 568, 598, 603
FspBI	CTAG	3 cut(s)	393, 534, 1154
GlaI	GCGC	1 cut(s)	601
GluI	GCNGC	8 cut(s)	74, 295, 524, 552, 565, 568, 598, 603
GsuI	CTGGAG	4 cut(s)	216, 327, 344, 365
HaeII	RGCGCY	1 cut(s)	603
HaeIII	GGCC	8 cut(s)	329, 530, 538, 614, 683, 760, 794, 1047
HapII	CCGG	5 cut(s)	606, 615, 692, 795, 1131
HhaI	GCGC	1 cut(s)	602
Hin1I	GRCGYC	2 cut(s)	600, 951
Hin1II	CATG	3 cut(s)	588, 815, 1220
Hin6I	GCGC	1 cut(s)	600
HinP1I	GCGC	1 cut(s)	600
HindIII	AAGCTT	2 cut(s)	12, 935
HinfI	GANTC	4 cut(s)	355, 676, 859, 894
HpaII	CCGG	5 cut(s)	606, 615, 692, 795, 1131
Hpy166II	GTNNAC	2 cut(s)	35, 653
Hpy188I	TCNGA	7 cut(s)	85, 99, 436, 452, 1118, 1150, 1181
Hpy188III	TCNNGA	4 cut(s)	195, 344, 361, 1154
Hpy8I	GTNNAC	2 cut(s)	35, 653
Hpy99I	CGWCG	3 cut(s)	716, 953, 956
HpyAV	CCTTC	1 cut(s)	955
HpyCH4III	ACNGT	1 cut(s)	965
HpyCH4IV	ACGT	3 cut(s)	113, 559, 951
HpyCH4V	TGCA	9 cut(s)	73, 210, 243, 284, 526, 811, 854, 883, 1261
HpyF10VI	GCNNNNNNNGC	7 cut(s)	124, 207, 551, 573, 594, 611, 707
HpyF3I	CTNAG	1 cut(s)	1097
HpySE526I	ACGT	3 cut(s)	113, 559, 951
Hsp92I	GRCGYC	2 cut(s)	600, 951
Hsp92II	CATG	3 cut(s)	588, 815, 1220
HspAI	GCGC	1 cut(s)	600
KasI	GGCGCC	1 cut(s)	599
Kzo9I	GATC	9 cut(s)	80, 427, 447, 628, 723, 733, 805, 1150, 1279
LmnI	GCTCC	2 cut(s)	420, 1181
Lsp1109I	GCAGC	4 cut(s)	85, 306, 510, 563
LweI	GCATC	3 cut(s)	688, 851, 965
MaeI	CTAG	3 cut(s)	393, 534, 1154
MaeII	ACGT	3 cut(s)	113, 559, 951
MaeIII	GTNAC	4 cut(s)	236, 1031, 1219, 1271
MalI	GATC	9 cut(s)	82, 429, 449, 630, 725, 735, 807, 1152, 1281
MbiI	CCGCTC	1 cut(s)	597
MboI	GATC	9 cut(s)	80, 427, 447, 628, 723, 733, 805, 1150, 1279
MboII	GAAGA	2 cut(s)	146, 927
MfeI	CAATTG	2 cut(s)	371, 443
MflI	RGATCY	5 cut(s)	80, 427, 628, 733, 1150
MhlI	GDGCHC	1 cut(s)	148
MlsI	TGGCCA	2 cut(s)	329, 683
MluNI	TGGCCA	2 cut(s)	329, 683
Mly113I	GGCGCC	1 cut(s)	600
MlyI	GAGTC	1 cut(s)	853
MmeI	TCCRAC	3 cut(s)	765, 984, 1159
MnlI	CCTC	2 cut(s)	62, 191
Mox20I	TGGCCA	2 cut(s)	329, 683
MscI	TGGCCA	2 cut(s)	329, 683
MseI	TTAA	5 cut(s)	176, 479, 486, 1002, 1140
MslI	CAYNNNNRTG	1 cut(s)	888
Msp20I	TGGCCA	2 cut(s)	329, 683
MspA1I	CMGCKG	2 cut(s)	297, 1101
MspCI	CTTAAG	1 cut(s)	1001
MspI	CCGG	5 cut(s)	606, 615, 692, 795, 1131
MspR9I	CCNGG	2 cut(s)	425, 731
MunI	CAATTG	2 cut(s)	371, 443
MvaI	CCWGG	2 cut(s)	425, 731
MwoI	GCNNNNNNNGC	7 cut(s)	124, 207, 551, 573, 594, 611, 707
NarI	GGCGCC	1 cut(s)	600
NdeII	GATC	9 cut(s)	80, 427, 447, 628, 723, 733, 805, 1150, 1279
NheI	GCTAGC	1 cut(s)	392
NlaIII	CATG	3 cut(s)	588, 815, 1220
NlaIV	GGNNCC	3 cut(s)	382, 454, 601
NmeAIII	GCCGAG	1 cut(s)	727
NmuCI	GTSAC	1 cut(s)	1219
NspI	RCATGY	1 cut(s)	1220
NspV	TTCGAA	1 cut(s)	940
PciI	ACATGT	1 cut(s)	1216
PfeI	GAWTC	3 cut(s)	355, 676, 894
Pfl23II	CGTACG	1 cut(s)	556
PflMI	CCANNNNNTGG	1 cut(s)	424
PkrI	GCNGC	8 cut(s)	75, 296, 525, 553, 566, 569, 599, 604
PleI	GAGTC	1 cut(s)	853
PluTI	GGCGCC	1 cut(s)	603
PpsI	GAGTC	1 cut(s)	853
PscI	ACATGT	1 cut(s)	1216
Psp124BI	GAGCTC	1 cut(s)	148
Psp1406I	AACGTT	1 cut(s)	113
Psp6I	CCWGG	2 cut(s)	423, 729
PspGI	CCWGG	2 cut(s)	423, 729
PspLI	CGTACG	1 cut(s)	556
PspN4I	GGNNCC	3 cut(s)	382, 454, 601
PspPI	GGNCC	6 cut(s)	452, 537, 612, 653, 758, 1046
PstI	CTGCAG	3 cut(s)	75, 245, 528
PsuI	RGATCY	5 cut(s)	80, 427, 628, 733, 1150
RsaI	GTAC	1 cut(s)	558
RsaNI	GTAC	1 cut(s)	557
RseI	CAYNNNNRTG	1 cut(s)	888
SacI	GAGCTC	1 cut(s)	148
SaqAI	TTAA	5 cut(s)	176, 479, 486, 1002, 1140
SatI	GCNGC	8 cut(s)	74, 295, 524, 552, 565, 568, 598, 603
Sau3AI	GATC	9 cut(s)	80, 427, 447, 628, 723, 733, 805, 1150, 1279
Sau96I	GGNCC	6 cut(s)	452, 537, 612, 653, 758, 1046
SchI	GAGTC	1 cut(s)	853
ScrFI	CCNGG	2 cut(s)	425, 731
SduI	GDGCHC	1 cut(s)	148
SfaNI	GCATC	3 cut(s)	688, 851, 965
SfcI	CTRYAG	4 cut(s)	71, 241, 524, 1023
SfoI	GGCGCC	1 cut(s)	601
SfuI	TTCGAA	1 cut(s)	940
SinI	GGWCC	2 cut(s)	452, 653
SmiMI	CAYNNNNRTG	1 cut(s)	888
SmlI	CTYRAG	1 cut(s)	1001
SmoI	CTYRAG	1 cut(s)	1001
SsiI	CCGC	7 cut(s)	297, 543, 564, 567, 597, 603, 1101
SspDI	GGCGCC	1 cut(s)	599
SspMI	CTAG	3 cut(s)	393, 534, 1154
SstI	GAGCTC	1 cut(s)	148
StyD4I	CCNGG	2 cut(s)	423, 729
TaaI	ACNGT	1 cut(s)	965
TaiI	ACGT	3 cut(s)	116, 562, 954
TaqI	TCGA	3 cut(s)	940, 948, 1278
TauI	GCSGC	4 cut(s)	567, 570, 600, 605
TfiI	GAWTC	3 cut(s)	355, 676, 894
Tru1I	TTAA	5 cut(s)	176, 479, 486, 1002, 1140
Tru9I	TTAA	5 cut(s)	176, 479, 486, 1002, 1140
TscAI	CASTG	2 cut(s)	187, 630
TseFI	GTSAC	1 cut(s)	1219
TseI	GCWGC	4 cut(s)	73, 294, 523, 551
Tsp45I	GTSAC	1 cut(s)	1219
TspDTI	ATGAA	3 cut(s)	168, 240, 1051
TspGWI	ACGGA	1 cut(s)	227
TspRI	CASTG	2 cut(s)	187, 630
Van91I	CCANNNNNTGG	1 cut(s)	424
Vha464I	CTTAAG	1 cut(s)	1001
VpaK11BI	GGWCC	2 cut(s)	452, 653
XbaI	TCTAGA	1 cut(s)	1153
XceI	RCATGY	1 cut(s)	1220
XspI	CTAG	3 cut(s)	393, 534, 1154
ZraI	GACGTC	1 cut(s)	952

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.