RLG00000029911

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000236
Physical Location & Seq
Reverse (-)
51175033 .. 51183294
8262 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029911

Sequence Viewer

Length: 3072 bp
ATGTCCTTCTCATTTTGCAATGAAAGCAGCTATAATGGGATTGATGGCATCACTTGTGATTGCACTTTTCAAAACGGCACCATTTGCCACATCACAGAAATTGTACTGTGGGCTAAAGGTTTGACCGGATTTATTCCCGAAGAACTGGCCAATCTCACATATCTGAAGAGACTGGATCTCAGTAGGAATCAATTGACTGGTTCTATACCTGATTGTTTGGGGAATTTATCTTCACTCAACATCATGAATCTTCGCGAAAATCAATTGACCGGACCCATTCCGGCGAGTTTGGGGAATATGACATTTAAAGTATTCAACCGTACTTCTTCGCAGCGCAACATCGGTGTTGTCTTCCAACTGGATCTTTCGGACAATCAATTAAATGGATCCATACCAGCCATTTTAGGAAATGTGGTGGTCTCTTCAGTGACATCTGATCCAAATGCCTACCGAATGCTCAAGCTTAAGCAATATGACAGGGCTAATGTCGACTCACGCTTCTTCCTAGATCTTTCAAAAAATCAACTGACTGGGACTATACCAGAGAGCTTAGGGAATTTGACTTTCGCTAGATATATTTCTTTGGGTGACAACTTTCTCAACGGCTCTATACCAGCATCTTTGGGTGCATTGACTCATCTCGTTAACCTGTATTTGTATGACAATGGAATCTCTGATACTCTCCCACAAACACTTGGAAATTTGACATACCTTGAAGACATCGACGTCGGATCCAATATTATCACTGGGACGTTACCAAAAAGTTTTGCCAGCCTTACGCGTCTGACCGGGTTTGCTGTACCTGGTAACTACTTATCTGGCCCTTTACCTGACTTCATGGCCAACTGGACTTCAATCTATTCTCTTTTGGTCAACGGAAACAATTTCCACGGAAAGATACCCGCCGGGATTTTTAATTTATCAGATCTACAAAATTTGGCAATAAGCGATGTAGGAGACTGTCATTTCCAGTTCCCACCATCTACAAATGTGACGAGAAGTTTAACTACTTTGATACTTAGAAACTGCTCAATCACTGGTCAAATTCCTTCTTACATGGGAGATATGTCAATGTTACGGAATCTAGATCTGAGCTTCAACAACTTAACGGGCAGAATCCCAGATTCTTTGAAAAACTTAAATTTGAGTTATTTGTCCTTTTCAAACAATATGCTTTCTGGAAAAATTCCTGATTGGATTCAAAGTGCAGCCTGGAGTAAGATGGATCTTTCATTCAATAATTTTTCAAAGCTAACCTTTAAACCGTCGCCCAAGTTAGAACTGAATTTGTTTTCCTGCTGTTGCAACTCCTCAACCTGTCTGCCAAATACGACGGACCCAACCACGGAGAAGTATTGTCCCCAGGGAAAACCTAAGTACCGTTCATTGTTTATAAATTGTGGTGGTGGGGAAACACATGTTGATGGAAATGTCTATGATGAAGATAATGATACTAGTGCTGGAAGCACCATGGATCTAAAGTACAATGCTTTCAATTTTAGTAGTTTCTTAAAAACCGTGAGATGTGGGCTTTCCTCTGAAGCAGTTTTATATGATAATGCTCGCACTTCTCCTGTTTCTCTAAGATATTACGGGTTCTGTTTACATAAAGGCAAATACAATGTCACACTTCACTTTGCTGAAATTGTTGAATATGAAAATGCTTACAGACGTTCAAATAAACGCGTGTTTGATGTATCTATTCAGGGTGTGAGGAAACTAAAGGATTTCAACATTATAGACAAGGCAGGACGTCCCAATAACGTATATCAAGAAACTTTCACGGCTGTCAGTGTAAATGATAGTACATTAGAGATTTTCTTCTACTCGAGTGGAAAATGGCATGATCAGGGACCTCTCATATCTGCTATATCCGTAATTCCAGATTACAAGCTACGCAAACGACTATCTCCTCTGCACATAGCGCTCCTTACTGTGGCTTCAATCATAGTTTTCGTGTTGCTTTTATTGCTGTTTGCCTGGATGATGGGATGGCTGGGTACAGATCATTTACAAGAAATAGATATAGGTCTAGAAAAGCCTGTCACCCTCAAACAATTAAAAGATGCTACTCGGAATTTTAGCAAGAGGAACGAAATTGGTCAAGGGGCTTTTGGGACCGTTTATAGGGCTGAACTGCCAGGGAAAATTGTAGCTGTGAAGAAACTTTCCTCTCATTCAGAGGAAAGGATCAATCAGTTGAAAAATGAGTTTTATAACTTAAAATCAATGAGTCAAGAGAACCTTGTTCAGTTACTGGACGTTTACAACGCAAAAGGCCTGCATTTGCTCATCTATGAATATATGCAAAACCAGTCCCTTGCACACGCCTTATTTGACCCAAAGTCCAAATTGAAACTGGATTGGGAAGCTAGGTTTAACATTTGCTTGGGAATAGCTAGGGGATTGGTGTATCTCCATCAGCATCCCAGGCTGAAGATGGTTCACAGGGACATTAAATCCGCTAATATTCTTCTCGATGGAAACCTCAAGGCTAAAATATCAGACTTTGGATTGGCAATCCTTTACGCCGAAGATGATCAATTCAATTTCATCAAAGTAGAAGTGACAGAGGGATATATGGCACCTGAGTATGTACGAGGAATTGTGACATCTAAAGCTGATGTCTACAGTTTTGGGGTGGTTATACTTGAAACAGTTAGTGGAAGGACAAATGCAGGGCATAGGCGAGATAGAAAGGAAAGTAAATTTCTTTTAGACACGGCTTATGATTTACAGCAAAAAGGAAGGCTGGTGAACTTGGTCGACAAAACATTGTCTACCAAGTATGATGCAAAACAAGCCATCATCATCTTGAATTTAGCAGTAAAGTGCACCAGTATATCCCCAACTCTGAGGCCTACTATGTCTGAAGTTGTAAGTGTTCTTGTTGGCGACAAAAAGATTGAGGAGATTTGTCCCCCTGCTTTGAGTGATAGTCACATTACTCAGGTTGATTCCTCTGTTTCTATGGAAGTAACCTCGGGAGCATCCACGTCATCCAATTTGATCAAAGGGGAAGATGAAACAGAACATATTTCTGAGATAAGGCCCTTAGAGATATCAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 Malectin Pkinase Pkinase_Tyr

Protein Analysis

1024

Amino Acids

113.78

Weight (kDa)

7.01

Isoelectric Point (pI)

35.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 30 - 89 2.8e-07 Leucine rich repeat
Malectin PF11721 463 - 624 5.7e-29 Malectin domain
Pkinase PF00069 695 - 960 2.8e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 697 - 963 1.3e-41 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1394, 2217
AasI GACNNNNNNGTC 1 cut(s) 725
AatII GACGTC 2 cut(s) 729, 1756
AccB1I GGYRCC 2 cut(s) 77, 2584
AccI GTMKAC 4 cut(s) 489, 2628, 2766, 2780
AccII CGCG 3 cut(s) 255, 781, 1686
AciI CCGC 2 cut(s) 903, 2463
AcoI YGGCCR 2 cut(s) 147, 840
AcuI CTGAAG 5 cut(s) 185, 408, 1560, 2456, 2892
AcyI GRCGYC 2 cut(s) 726, 1753
AfaI GTAC 8 cut(s) 105, 322, 801, 1379, 1484, 1807, 2002, 2598
AfeI AGCGCT 1 cut(s) 1926
AfiI CCNNNNNNNGG 3 cut(s) 1345, 1936, 2127
AflII CTTAAG 1 cut(s) 464
AflIII ACRYGT 3 cut(s) 779, 1417, 1684
AhdI GACNNNNNGTC 1 cut(s) 2344
AhlI ACTAGT 1 cut(s) 1454
AjiI CACGTC 1 cut(s) 2997
AjnI CCWGG 6 cut(s) 802, 1211, 1362, 1979, 2140, 2429
Alw21I GWGCWC 1 cut(s) 2837
Alw26I GTCTC 3 cut(s) 163, 424, 951
Alw44I GTGCAC 1 cut(s) 2833
AlwNI CAGNNNCTG 1 cut(s) 2257
Ama87I CYCGRG 2 cut(s) 1828, 2983
Aor51HI AGCGCT 1 cut(s) 1926
AoxI GGCC 6 cut(s) 147, 820, 840, 2278, 2858, 3050
ApaLI GTGCAC 1 cut(s) 2833
ApeKI GCWGC 3 cut(s) 27, 331, 1208
ArsI GACNNNNNNTTYG 2 cut(s) 1608, 1640
AspLEI GCGC 2 cut(s) 336, 1927
AspS9I GGNCC 6 cut(s) 272, 821, 1336, 1853, 2118, 3051
AsuC2I CCSGG 2 cut(s) 790, 907
AsuHPI GGTGA 3 cut(s) 599, 2038, 2767
AvaI CYCGRG 2 cut(s) 1828, 2983
AvaII GGWCC 4 cut(s) 272, 1336, 1853, 2118
BaeGI GKGCMC 1 cut(s) 2837
BaeI ACNNNNGTAYC 2 cut(s) 1361, 1394
BalI TGGCCA 2 cut(s) 149, 842
BamHI GGATCC 2 cut(s) 386, 731
BanI GGYRCC 2 cut(s) 77, 2584
BarI GAAGNNNNNNTAC 2 cut(s) 991, 1023
BbsI GAAGAC 2 cut(s) 343, 723
Bbv12I GWGCWC 1 cut(s) 2837
BbvI GCAGC 3 cut(s) 39, 343, 1220
BceAI ACGGC 4 cut(s) 91, 619, 1800, 2739
BciT130I CCWGG 6 cut(s) 804, 1213, 1364, 1981, 2142, 2431
BclI TGATCA 3 cut(s) 1846, 2539, 3009
BcnI CCSGG 2 cut(s) 790, 907
BcoDI GTCTC 3 cut(s) 163, 424, 951
BcuI ACTAGT 1 cut(s) 1454
BfaI CTAG 7 cut(s) 506, 570, 1085, 1455, 2033, 2373, 2400
BfmI CTRYAG 1 cut(s) 2629
BfoI RGCGCY 1 cut(s) 1928
BfrI CTTAAG 1 cut(s) 464
BglII AGATCT 3 cut(s) 508, 925, 1087
BisI GCNGC 3 cut(s) 28, 332, 1209
BlsI GCNGC 3 cut(s) 29, 333, 1210
Bme1390I CCNGG 8 cut(s) 790, 804, 907, 1213, 1364, 1981, 2142, 2431
Bme18I GGWCC 4 cut(s) 272, 1336, 1853, 2118
BmeRI GACNNNNNGTC 1 cut(s) 2344
BmeT110I CYCGRG 2 cut(s) 1828, 2983
BmgBI CACGTC 1 cut(s) 2997
BmgT120I GGNCC 6 cut(s) 272, 821, 1336, 1853, 2118, 3051
BmiI GGNNCC 8 cut(s) 79, 274, 388, 733, 1338, 1854, 2119, 2586
BmrFI CCNGG 8 cut(s) 790, 804, 907, 1213, 1364, 1981, 2142, 2431
BmrI ACTGGG 2 cut(s) 540, 756
BmsI GCATC 6 cut(s) 57, 626, 2056, 2434, 2782, 2999
BmuI ACTGGG 2 cut(s) 540, 756
BpiI GAAGAC 2 cut(s) 343, 723
BpmI CTGGAG 1 cut(s) 1234
Bpu10I CCTNAGC 1 cut(s) 550
BpuEI CTTGAG 2 cut(s) 443, 2474
BpuMI CCSGG 2 cut(s) 790, 907
BsaHI GRCGYC 2 cut(s) 726, 1753
BsaI GGTCTC 1 cut(s) 424
BsaJI CCNNGG 8 cut(s) 889, 1344, 1362, 1363, 1470, 2141, 2429, 2982
BsaWI WCCGGW 2 cut(s) 125, 269
Bsc4I CCNNNNNNNGG 3 cut(s) 1345, 1936, 2127
Bse3DI GCAATG 1 cut(s) 25
BseBI CCWGG 6 cut(s) 804, 1213, 1364, 1981, 2142, 2431
BseDI CCNNGG 8 cut(s) 889, 1344, 1362, 1363, 1470, 2141, 2429, 2982
BseGI GGATG 5 cut(s) 1989, 1997, 2425, 2990, 2999
BseLI CCNNNNNNNGG 3 cut(s) 1345, 1936, 2127
BseMI GCAATG 1 cut(s) 25
BseMII CTCAG 6 cut(s) 193, 1082, 2580, 2846, 2963, 3033
BseRI GAGGAG 3 cut(s) 1300, 1902, 2924
BseSI GKGCMC 1 cut(s) 2837
BseXI GCAGC 3 cut(s) 39, 343, 1220
BseYI CCCAGC 1 cut(s) 1996
BsgI GTGCAG 2 cut(s) 1227, 1901
Bsh1236I CGCG 3 cut(s) 255, 781, 1686
BshFI GGCC 6 cut(s) 149, 822, 842, 2280, 2860, 3052
BshNI GGYRCC 2 cut(s) 77, 2584
BsiHKAI GWGCWC 1 cut(s) 2837
BsiHKCI CYCGRG 2 cut(s) 1828, 2983
BsiSI CCGG 5 cut(s) 126, 270, 281, 789, 906
BslFI GGGAC 9 cut(s) 547, 763, 1344, 1740, 1866, 2131, 2302, 2465, 2904
BslI CCNNNNNNNGG 3 cut(s) 1345, 1936, 2127
BsmAI GTCTC 3 cut(s) 163, 424, 951
BsmFI GGGAC 9 cut(s) 547, 763, 1344, 1740, 1866, 2131, 2302, 2465, 2904
BsmI GAATGC 1 cut(s) 459
BsnI GGCC 6 cut(s) 149, 822, 842, 2280, 2860, 3052
Bso31I GGTCTC 1 cut(s) 424
BsoBI CYCGRG 2 cut(s) 1828, 2983
Bsp1286I GDGCHC 1 cut(s) 2837
Bsp19I CCATGG 1 cut(s) 1470
Bsp68I TCGCGA 1 cut(s) 255
BspACI CCGC 2 cut(s) 903, 2463
BspANI GGCC 6 cut(s) 149, 822, 842, 2280, 2860, 3052
BspCNI CTCAG 6 cut(s) 192, 1083, 2581, 2847, 2962, 3034
BspFNI CGCG 3 cut(s) 255, 781, 1686
BspHI TCATGA 1 cut(s) 243
BspLI GGNNCC 8 cut(s) 79, 274, 388, 733, 1338, 1854, 2119, 2586
BspT107I GGYRCC 2 cut(s) 77, 2584
BspTI CTTAAG 1 cut(s) 464
BspTNI GGTCTC 1 cut(s) 424
BsrDI GCAATG 1 cut(s) 25
BssECI CCNNGG 8 cut(s) 889, 1344, 1362, 1363, 1470, 2141, 2429, 2982
BssNI GRCGYC 2 cut(s) 726, 1753
BssT1I CCWWGG 1 cut(s) 1470
Bst2UI CCWGG 6 cut(s) 804, 1213, 1364, 1981, 2142, 2431
Bst6I CTCTTC 2 cut(s) 161, 427
BstACI GRCGYC 2 cut(s) 726, 1753
BstAFI CTTAAG 1 cut(s) 464
BstAPI GCANNNNNTGC 1 cut(s) 84
BstC8I GCNNGC 3 cut(s) 772, 1564, 2282
BstDSI CCRYGG 3 cut(s) 889, 1344, 1470
BstF5I GGATG 5 cut(s) 1989, 1997, 2425, 2990, 2999
BstFNI CGCG 3 cut(s) 255, 781, 1686
BstH2I RGCGCY 1 cut(s) 1928
BstHHI GCGC 2 cut(s) 336, 1927
BstMAI GTCTC 3 cut(s) 163, 424, 951
BstMWI GCNNNNNNNGC 6 cut(s) 24, 84, 1924, 1969, 2431, 2801
BstNI CCWGG 6 cut(s) 804, 1213, 1364, 1981, 2142, 2431
BstNSI RCATGY 1 cut(s) 1421
BstSCI CCNGG 8 cut(s) 788, 802, 905, 1211, 1362, 1979, 2140, 2429
BstSFI CTRYAG 1 cut(s) 2629
BstSLI GKGCMC 1 cut(s) 2837
BstUI CGCG 3 cut(s) 255, 781, 1686
BstV1I GCAGC 3 cut(s) 39, 343, 1220
BstV2I GAAGAC 2 cut(s) 343, 723
BstX2I RGATCY 9 cut(s) 175, 361, 386, 508, 731, 925, 1087, 1225, 1474
BstYI RGATCY 9 cut(s) 175, 361, 386, 508, 731, 925, 1087, 1225, 1474
BsuRI GGCC 6 cut(s) 149, 822, 842, 2280, 2860, 3052
BtgI CCRYGG 3 cut(s) 889, 1344, 1470
BtgZI GCGATG 1 cut(s) 963
BtrI CACGTC 1 cut(s) 2997
BtsCI GGATG 5 cut(s) 1989, 1997, 2425, 2990, 2999
BtsIMutI CAGTG 4 cut(s) 432, 744, 1035, 1798
BtuMI TCGCGA 1 cut(s) 255
Cac8I GCNNGC 3 cut(s) 772, 1564, 2282
CaiI CAGNNNCTG 1 cut(s) 2257
CciI TCATGA 1 cut(s) 243
CfoI GCGC 2 cut(s) 336, 1927
Cfr13I GGNCC 6 cut(s) 272, 821, 1336, 1853, 2118, 3051
CseI GACGC 1 cut(s) 770
CsiI ACCWGGT 1 cut(s) 802
Csp6I GTAC 8 cut(s) 104, 321, 800, 1378, 1483, 1806, 2001, 2597
CviAII CATG 6 cut(s) 244, 838, 1057, 1418, 1471, 1844
CviQI GTAC 8 cut(s) 104, 321, 800, 1378, 1483, 1806, 2001, 2597
DraI TTTAAA 2 cut(s) 307, 1261
DrdI GACNNNNNNGTC 1 cut(s) 725
DriI GACNNNNNGTC 1 cut(s) 2344
DseDI GACNNNNNNGTC 1 cut(s) 725
EaeI YGGCCR 2 cut(s) 147, 840
Eam1104I CTCTTC 2 cut(s) 161, 427
Eam1105I GACNNNNNGTC 1 cut(s) 2344
EarI CTCTTC 2 cut(s) 161, 427
Eco130I CCWWGG 1 cut(s) 1470
Eco147I AGGCCT 2 cut(s) 2280, 2860
Eco31I GGTCTC 1 cut(s) 424
Eco32I GATATC 1 cut(s) 3063
Eco47I GGWCC 4 cut(s) 272, 1336, 1853, 2118
Eco47III AGCGCT 1 cut(s) 1926
Eco57I CTGAAG 5 cut(s) 185, 408, 1560, 2456, 2892
Eco88I CYCGRG 2 cut(s) 1828, 2983
EcoO109I RGGNCCY 2 cut(s) 1853, 3051
EcoRII CCWGG 6 cut(s) 802, 1211, 1362, 1979, 2140, 2429
EcoRV GATATC 1 cut(s) 3063
EcoT14I CCWWGG 1 cut(s) 1470
ErhI CCWWGG 1 cut(s) 1470
FaeI CATG 6 cut(s) 247, 841, 1060, 1421, 1474, 1847
FalI AAGNNNNNCTT 4 cut(s) 1241, 1273, 2229, 2261
FaqI GGGAC 9 cut(s) 547, 763, 1344, 1740, 1866, 2131, 2302, 2465, 2904
FatI CATG 6 cut(s) 243, 837, 1056, 1417, 1470, 1843
FauI CCCGC 1 cut(s) 910
FbaI TGATCA 3 cut(s) 1846, 2539, 3009
FblI GTMKAC 4 cut(s) 489, 2628, 2766, 2780
Fnu4HI GCNGC 3 cut(s) 28, 332, 1209
FokI GGATG 5 cut(s) 1996, 2004, 2412, 2977, 2986
Fsp4HI GCNGC 3 cut(s) 28, 332, 1209
FspBI CTAG 7 cut(s) 506, 570, 1085, 1455, 2033, 2373, 2400
GlaI GCGC 2 cut(s) 335, 1926
GluI GCNGC 3 cut(s) 28, 332, 1209
GsaI CCCAGC 1 cut(s) 2000
GsuI CTGGAG 1 cut(s) 1234
HaeII RGCGCY 1 cut(s) 1928
HaeIII GGCC 6 cut(s) 149, 822, 842, 2280, 2860, 3052
HapII CCGG 5 cut(s) 126, 270, 281, 789, 906
HgaI GACGC 1 cut(s) 770
HhaI GCGC 2 cut(s) 336, 1927
Hin1I GRCGYC 2 cut(s) 726, 1753
Hin1II CATG 6 cut(s) 247, 841, 1060, 1421, 1474, 1847
Hin6I GCGC 2 cut(s) 334, 1925
HinP1I GCGC 2 cut(s) 334, 1925
HincII GTYRAC 4 cut(s) 490, 646, 874, 2767
HindII GTYRAC 4 cut(s) 490, 646, 874, 2767
HindIII AAGCTT 1 cut(s) 461
HpaI GTTAAC 1 cut(s) 646
HpaII CCGG 5 cut(s) 126, 270, 281, 789, 906
HphI GGTGA 3 cut(s) 599, 2038, 2767
Hpy99I CGWCG 4 cut(s) 728, 731, 1270, 1336
HpyAV CCTTC 4 cut(s) 16, 1059, 2661, 2742
HpyCH4IV ACGT 7 cut(s) 726, 752, 1672, 1753, 1764, 2262, 2996
HpyF10VI GCNNNNNNNGC 6 cut(s) 24, 84, 1924, 1969, 2431, 2801
HpySE526I ACGT 7 cut(s) 726, 752, 1672, 1753, 1764, 2262, 2996
Hsp92I GRCGYC 2 cut(s) 726, 1753
Hsp92II CATG 6 cut(s) 247, 841, 1060, 1421, 1474, 1847
HspAI GCGC 2 cut(s) 334, 1925
Ksp22I TGATCA 3 cut(s) 1846, 2539, 3009
KspAI GTTAAC 1 cut(s) 646
LmnI GCTCC 2 cut(s) 1932, 2987
Lsp1109I GCAGC 3 cut(s) 39, 343, 1220
LweI GCATC 6 cut(s) 57, 626, 2056, 2434, 2782, 2999
MabI ACCWGGT 1 cut(s) 802
MaeI CTAG 7 cut(s) 506, 570, 1085, 1455, 2033, 2373, 2400
MaeII ACGT 7 cut(s) 726, 752, 1672, 1753, 1764, 2262, 2996
MfeI CAATTG 2 cut(s) 191, 263
MflI RGATCY 9 cut(s) 175, 361, 386, 508, 731, 925, 1087, 1225, 1474
MhlI GDGCHC 1 cut(s) 2837
MlsI TGGCCA 2 cut(s) 149, 842
MluI ACGCGT 2 cut(s) 779, 1684
MluNI TGGCCA 2 cut(s) 149, 842
MlyI GAGTC 3 cut(s) 485, 628, 2242
MmeI TCCRAC 2 cut(s) 379, 709
Mox20I TGGCCA 2 cut(s) 149, 842
MscI TGGCCA 2 cut(s) 149, 842
MslI CAYNNNNRTG 1 cut(s) 1422
Msp20I TGGCCA 2 cut(s) 149, 842
MspCI CTTAAG 1 cut(s) 464
MspI CCGG 5 cut(s) 126, 270, 281, 789, 906
MspR9I CCNGG 8 cut(s) 790, 804, 907, 1213, 1364, 1981, 2142, 2431
MunI CAATTG 2 cut(s) 191, 263
Mva1269I GAATGC 1 cut(s) 459
MvaI CCWGG 6 cut(s) 804, 1213, 1364, 1981, 2142, 2431
MvnI CGCG 3 cut(s) 255, 781, 1686
MwoI GCNNNNNNNGC 6 cut(s) 24, 84, 1924, 1969, 2431, 2801
NciI CCSGG 2 cut(s) 790, 907
NcoI CCATGG 1 cut(s) 1470
NlaIII CATG 6 cut(s) 247, 841, 1060, 1421, 1474, 1847
NlaIV GGNNCC 8 cut(s) 79, 274, 388, 733, 1338, 1854, 2119, 2586
NmuCI GTSAC 8 cut(s) 427, 587, 991, 1624, 2044, 2566, 2608, 2939
NruI TCGCGA 1 cut(s) 255
NspI RCATGY 1 cut(s) 1421
PaeR7I CTCGAG 1 cut(s) 1828
PagI TCATGA 1 cut(s) 243
PasI CCCWGGG 1 cut(s) 1363
PceI AGGCCT 2 cut(s) 2280, 2860
PciI ACATGT 1 cut(s) 1417
PctI GAATGC 1 cut(s) 459
PfeI GAWTC 8 cut(s) 187, 247, 669, 1081, 1116, 1124, 1198, 2957
PkrI GCNGC 3 cut(s) 29, 333, 1210
PleI GAGTC 3 cut(s) 485, 628, 2241
PpsI GAGTC 3 cut(s) 485, 628, 2241
PpuMI RGGWCCY 1 cut(s) 1853
PscI ACATGT 1 cut(s) 1417
PsiI TTATAA 2 cut(s) 1394, 2217
Psp5II RGGWCCY 1 cut(s) 1853
Psp6I CCWGG 6 cut(s) 802, 1211, 1362, 1979, 2140, 2429
PspFI CCCAGC 1 cut(s) 1996
PspGI CCWGG 6 cut(s) 802, 1211, 1362, 1979, 2140, 2429
PspN4I GGNNCC 8 cut(s) 79, 274, 388, 733, 1338, 1854, 2119, 2586
PspPI GGNCC 6 cut(s) 272, 821, 1336, 1853, 2118, 3051
PspPPI RGGWCCY 1 cut(s) 1853
PspXI VCTCGAGB 1 cut(s) 1828
PstNI CAGNNNCTG 1 cut(s) 2257
PsuI RGATCY 9 cut(s) 175, 361, 386, 508, 731, 925, 1087, 1225, 1474
RruI TCGCGA 1 cut(s) 255
RsaI GTAC 8 cut(s) 105, 322, 801, 1379, 1484, 1807, 2002, 2598
RsaNI GTAC 8 cut(s) 104, 321, 800, 1378, 1483, 1806, 2001, 2597
RseI CAYNNNNRTG 1 cut(s) 1422
SalI GTCGAC 2 cut(s) 488, 2765
SatI GCNGC 3 cut(s) 28, 332, 1209
Sau96I GGNCC 6 cut(s) 272, 821, 1336, 1853, 2118, 3051
SchI GAGTC 3 cut(s) 485, 628, 2242
ScrFI CCNGG 8 cut(s) 790, 804, 907, 1213, 1364, 1981, 2142, 2431
SduI GDGCHC 1 cut(s) 2837
SexAI ACCWGGT 1 cut(s) 802
SfaNI GCATC 6 cut(s) 57, 626, 2056, 2434, 2782, 2999
SfcI CTRYAG 1 cut(s) 2629
Sfr274I CTCGAG 1 cut(s) 1828
SinI GGWCC 4 cut(s) 272, 1336, 1853, 2118
SlaI CTCGAG 1 cut(s) 1828
SmiMI CAYNNNNRTG 1 cut(s) 1422
SmlI CTYRAG 4 cut(s) 458, 464, 1828, 2489
SmoI CTYRAG 4 cut(s) 458, 464, 1828, 2489
SpeI ACTAGT 1 cut(s) 1454
SseBI AGGCCT 2 cut(s) 2280, 2860
SsiI CCGC 2 cut(s) 903, 2463
SspI AATATT 2 cut(s) 739, 2470
SspMI CTAG 7 cut(s) 506, 570, 1085, 1455, 2033, 2373, 2400
StuI AGGCCT 2 cut(s) 2280, 2860
StyD4I CCNGG 8 cut(s) 788, 802, 905, 1211, 1362, 1979, 2140, 2429
StyI CCWWGG 1 cut(s) 1470
TaiI ACGT 7 cut(s) 729, 755, 1675, 1756, 1767, 2265, 2999
TaqI TCGA 5 cut(s) 489, 723, 1829, 2478, 2766
TatI WGTACW 3 cut(s) 103, 1482, 1805
TfiI GAWTC 8 cut(s) 187, 247, 669, 1081, 1116, 1124, 1198, 2957
TscAI CASTG 4 cut(s) 432, 751, 1042, 1798
TseFI GTSAC 8 cut(s) 427, 587, 991, 1624, 2044, 2566, 2608, 2939
TseI GCWGC 3 cut(s) 27, 331, 1208
Tsp45I GTSAC 8 cut(s) 427, 587, 991, 1624, 2044, 2566, 2608, 2939
TspGWI ACGGA 6 cut(s) 891, 906, 1093, 1349, 1361, 1864
TspRI CASTG 4 cut(s) 432, 751, 1042, 1798
Vha464I CTTAAG 1 cut(s) 464
VneI GTGCAC 1 cut(s) 2833
VpaK11BI GGWCC 4 cut(s) 272, 1336, 1853, 2118
XbaI TCTAGA 2 cut(s) 1084, 2032
XceI RCATGY 1 cut(s) 1421
XcmI CCANNNNNNNNNTGG 2 cut(s) 2356, 2437
XhoI CTCGAG 1 cut(s) 1828
XmiI GTMKAC 4 cut(s) 489, 2628, 2766, 2780
XspI CTAG 7 cut(s) 506, 570, 1085, 1455, 2033, 2373, 2400
ZraI GACGTC 2 cut(s) 727, 1754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.