Rh5BG011800

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Reverse (-)
839238 .. 849464
10227 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG011800.1

Sequence Viewer

Length: 2457 bp
ATGGGTACTGAAGCTTCAGCAAGACTTGTTATCATTCTAGGCCTCGTCTTCACTCTTTGTCAGCTTGGTTCTGAATTCAAGTATCAGAGTATAGCTCAAGCGTTGCCCTATGAAGAAAGGAGTGCTTTTTATCAAATAGCATCTGAGTTGGGGTTAAAGTTCTTTGGGGATCAAATAGAATCAATTTGCTCGGAGAGAAGCTATGGAACCACATGTGACTGCGGTTTTCGAAATAACACCATTTGCCACATCACAGAAATTGCACTGATTGGCAGCGGTTTGACTGGAGTTATACCTAAAGAACTGGCCAATCTCACACATTTGGAAAGCCTATACAGTGGGTACGCCGCCAGCTGCGACCGCAAGGGCTTTCCACCGTGCCATCAGGGAAACCTAGGCCGTAAGGGCGACAACCCAGGGTACGCCGCCAGCTGCGACCGCAAGGGCTTTCCACCATGCCATTATAGCCGCAGCAGACGTCTAAGTCTAACACTGGATCTTTCAAGCAATCAGTTGAGTGGACCCATACCAGCCACTTTAGGGAATTTGGCTGACCGATCGGCTAAAGCCGACAACGTAACGGTCGACCTATACGTAGATCTTTCAGACAATCAGCTGACTGGGCCTATACCAGAGAGCTTAGGCAATTTGAGTTTCGTCAGATATCTCAATCTGCGTGACAACTTTCTCAACGGTTCGATACCAGCATCTTTGGGTAGAATGACTAGTTTGGTTGACCTGATTTTGACTAACAATGGAATCTCTGGTGCTCTCCCACAAACACTTGGAAACTTGACAAACCTTCAAACTTTCTCTGTCGGATACAACAGTATCAATGGGACGTTACCAAAAGAATTTGGCAGCCTTACGAGCCTGAATGGATTTTCTGTAGCTGGTAACAATTTGTCTGGACCTTTCCCTGACTTCATAGCCAACTGGACTTCTATCTACAGTCTTTATCTCAACGGAAACAATTTCCACGGGAAGATACCTCCAGGAGTTTTTAATTTATTGTGGCTAAATATTTTGGCAATAAGTGATGTCGGAGCAGATTCTCATTTCCAGTTCCCACCGTCTACAAATGTGTCATTTCGTATTTTGATACTAAGAAACTGCTCGATCAATGGTTCAATTCCTTCTTACATTGGAAATATGTCATCATTATTGAACCTGTCTTTTTCAAACAATAACCTTTCTGGAGAAATGCCTGATTGGATTCAAAATGCAAGCTGGACTAAAATGGATCTTTCATACAATAATTTTTCAAAACCCTTTAAAACGTTGTCCAAGTTAGACCTGAATTTGTTTTCCTGCTGCTGCAACTCCTCAACCTGTCTGCCAAATACGACGGACCCAACCATGGAGAATTATTGTCCCCGGAAAAAACCTAATTACCATTCATTGTTTATAAATTGTGGTGGTGGGGAAACAATTAACAGCGTTGATGGAAATATTTATGATCAAGATAATGATACATTGCAGTTTTACCTGAGTCCAAAAGGAAACTGGGCTCGGAGTAGTGCTGGAAACACTGTCGATCTAGACTATGCTTCCAATACTAGTCAATTCTTAAAGGCCGTGAGATGTGGGCTTTCCTCTGAAGCAGTTTTATACAATAATGCTCGCACTTCTCCTGTCTCTCTAAAATATTACGGGTTCTGTTTACGTAAAGGCAAATACAGTGTAACACTTCACTTTGCTGAAATTGTTGATGATGATAATGATTACAAAAGTACAGATAAACGCGTATTTGATGTATATATTCAGGGTGAGAGGAAACTAAAGGATTTCAACATCATAGACAAGGCAGGAGGTCCGAATAACGTATATCAAGAAAATTTCACGGCTGTCAGTGTAAATGATAGTACATTAGAGATCCACTTCTACTCGGTTGGAAAAGGGCTTCATCAGGGACCTCTCATATCTGCTATATCCGTAACTCCAGAGTACAAGCTACGCAAACCATCATCTCCTCTGCACATAGCGCTCATTACTGTGTCTTCAATCATAGTTTTCGTGTTGCTTTTCTTGCTTTTTGCCTGGATGATGGGATGGCTGGGTGCAGATCACTTAAAAGAAATAGATATAGGTCTAGAAAAGCCTGTCACCCTCAAACAATTAAAAGATGCTACTCGGAATTTTAGCAAGAGGAACGAGATTGGTAAAGGGGCTTTTGGGACCGTTTACAAGGCTGAAGTGCAAGGGAGAATTGTAGCTGTGAAGAGACTTTCCTCTCATTCAGAGGAAAGGATGTCCTCTCATTCAGAGGAAAGGATCTCCTCTCATTCAGAGGAAAGGATCAATCAGTTGAAAAATGAGTTTTATGCCTTAAATTCAATGAGTCAAGAGAACCTTGTTCAGTTGCTGGACGTTTACAACGCAAAAGGCCTGCATTTGCTCATCTATGAATATATGCAAAACAACTCCCTTGCACACGCCTTATTTGGTACATTTTAA

Protein Analysis

818

Amino Acids

90.27

Weight (kDa)

6.51

Isoelectric Point (pI)

35.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 243 - 302 8.6e-06 Leucine rich repeat
Malectin PF11721 467 - 644 3.1e-30 Malectin domain
Pkinase PF00069 715 - 814 2.3e-10 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 717 - 814 3.1e-07 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1409
AasI GACNNNNNNGTC 1 cut(s) 483
AatII GACGTC 1 cut(s) 481
AccI GTMKAC 2 cut(s) 585, 1076
AccII CGCG 1 cut(s) 1746
AciI CCGC 7 cut(s) 222, 276, 348, 361, 426, 439, 469
AclI AACGTT 1 cut(s) 1280
AclWI GGATC 6 cut(s) 177, 504, 1251, 1870, 2282, 2306
AcoI YGGCCR 1 cut(s) 306
AcsI RAATTY 7 cut(s) 74, 544, 854, 1300, 1837, 2137, 2332
AcuI CTGAAG 3 cut(s) 30, 1620, 2214
AcyI GRCGYC 1 cut(s) 478
AfaI GTAC 7 cut(s) 7, 344, 422, 1735, 1867, 1949, 2449
AfeI AGCGCT 1 cut(s) 1986
AfiI CCNNNNNNNGG 2 cut(s) 540, 1360
AflIII ACRYGT 2 cut(s) 212, 1744
AhlI ACTAGT 2 cut(s) 725, 1559
AjnI CCWGG 3 cut(s) 415, 994, 2039
Alw21I GWGCWC 1 cut(s) 772
Alw26I GTCTC 2 cut(s) 1642, 2218
AlwI GGATC 6 cut(s) 177, 504, 1251, 1870, 2282, 2306
AlwNI CAGNNNCTG 1 cut(s) 2365
Aor51HI AGCGCT 1 cut(s) 1986
AoxI GGCC 6 cut(s) 40, 306, 397, 623, 1575, 2386
ApeKI GCWGC 7 cut(s) 273, 354, 432, 471, 861, 1314, 1317
ApoI RAATTY 7 cut(s) 74, 544, 854, 1300, 1837, 2137, 2332
AspA2I CCTAGG 1 cut(s) 394
AspLEI GCGC 1 cut(s) 1987
AspS9I GGNCC 7 cut(s) 521, 623, 911, 1351, 1814, 1913, 2178
AsuC2I CCSGG 1 cut(s) 1378
AsuHPI GGTGA 2 cut(s) 1781, 2098
AsuII TTCGAA 1 cut(s) 229
AvaII GGWCC 6 cut(s) 521, 911, 1351, 1814, 1913, 2178
AvrII CCTAGG 1 cut(s) 394
BaeI ACNNNNGTAYC 4 cut(s) 814, 814, 847, 847
BalI TGGCCA 1 cut(s) 308
BanII GRGCYC 1 cut(s) 1513
BarI GAAGNNNNNNTAC 1 cut(s) 30
BbsI GAAGAC 2 cut(s) 40, 1992
Bbv12I GWGCWC 1 cut(s) 772
BbvI GCAGC 7 cut(s) 285, 341, 419, 483, 873, 1301, 1304
BccI CCATC 5 cut(s) 390, 1439, 1972, 2041, 2046
BceAI ACGGC 3 cut(s) 384, 1562, 1860
BciT130I CCWGG 3 cut(s) 417, 996, 2041
BciVI GTATCC 1 cut(s) 815
BclI TGATCA 1 cut(s) 1459
BcnI CCSGG 1 cut(s) 1378
BcoDI GTCTC 2 cut(s) 1642, 2218
BcuI ACTAGT 2 cut(s) 725, 1559
BfaI CTAG 6 cut(s) 38, 395, 726, 1541, 1560, 2093
BfmI CTRYAG 2 cut(s) 888, 949
BfoI RGCGCY 1 cut(s) 1988
BfuI GTATCC 1 cut(s) 815
BglI GCCNNNNNGGC 1 cut(s) 405
BglII AGATCT 1 cut(s) 598
BlnI CCTAGG 1 cut(s) 394
Bme1390I CCNGG 4 cut(s) 417, 996, 1378, 2041
Bme18I GGWCC 6 cut(s) 521, 911, 1351, 1814, 1913, 2178
BmgT120I GGNCC 7 cut(s) 521, 623, 911, 1351, 1814, 1913, 2178
BmiI GGNNCC 5 cut(s) 208, 523, 1353, 1914, 2179
BmrFI CCNGG 4 cut(s) 417, 996, 1378, 2041
BmrI ACTGGG 2 cut(s) 630, 1516
BmsI GCATC 3 cut(s) 149, 716, 2116
BmuI ACTGGG 2 cut(s) 630, 1516
BpiI GAAGAC 2 cut(s) 40, 1992
BplI GAGNNNNNCTC 2 cut(s) 79, 111
BpmI CTGGAG 4 cut(s) 306, 978, 1218, 1926
Bpu10I CCTNAGC 1 cut(s) 640
Bpu14I TTCGAA 1 cut(s) 229
BpuEI CTTGAG 1 cut(s) 81
BpuMI CCSGG 1 cut(s) 1378
BsaAI YACGTR 2 cut(s) 595, 1667
BsaHI GRCGYC 1 cut(s) 478
BsaJI CCNNGG 6 cut(s) 394, 415, 416, 979, 1359, 1376
Bsc4I CCNNNNNNNGG 2 cut(s) 540, 1360
Bse1I ACTGG 7 cut(s) 289, 309, 498, 625, 941, 1063, 1511
Bse3DI GCAATG 1 cut(s) 1475
BseBI CCWGG 3 cut(s) 417, 996, 2041
BseDI CCNNGG 6 cut(s) 394, 415, 416, 979, 1359, 1376
BseGI GGATG 3 cut(s) 2049, 2057, 2256
BseLI CCNNNNNNNGG 2 cut(s) 540, 1360
BseMI GCAATG 1 cut(s) 1475
BseMII CTCAG 2 cut(s) 135, 1481
BseNI ACTGG 7 cut(s) 289, 309, 498, 625, 941, 1063, 1511
BseRI GAGGAG 3 cut(s) 1315, 1962, 2269
BseXI GCAGC 7 cut(s) 285, 341, 419, 483, 873, 1301, 1304
BseYI CCCAGC 1 cut(s) 2056
BsgI GTGCAG 2 cut(s) 1961, 2082
Bsh1236I CGCG 1 cut(s) 1746
Bsh1285I CGRYCG 4 cut(s) 361, 439, 560, 585
BshFI GGCC 6 cut(s) 42, 308, 399, 625, 1577, 2388
BsiEI CGRYCG 4 cut(s) 361, 439, 560, 585
BsiHKAI GWGCWC 1 cut(s) 772
BsiSI CCGG 1 cut(s) 1378
BslFI GGGAC 4 cut(s) 853, 1359, 1926, 2191
BslI CCNNNNNNNGG 2 cut(s) 540, 1360
BsmAI GTCTC 2 cut(s) 1642, 2218
BsmFI GGGAC 4 cut(s) 853, 1359, 1926, 2191
BsnI GGCC 6 cut(s) 42, 308, 399, 625, 1577, 2388
Bsp119I TTCGAA 1 cut(s) 229
Bsp1286I GDGCHC 2 cut(s) 772, 1513
Bsp19I CCATGG 1 cut(s) 1359
BspACI CCGC 7 cut(s) 222, 276, 348, 361, 426, 439, 469
BspANI GGCC 6 cut(s) 42, 308, 399, 625, 1577, 2388
BspCNI CTCAG 2 cut(s) 136, 1482
BspFNI CGCG 1 cut(s) 1746
BspLI GGNNCC 5 cut(s) 208, 523, 1353, 1914, 2179
BspPI GGATC 6 cut(s) 177, 504, 1251, 1870, 2282, 2306
BspT104I TTCGAA 1 cut(s) 229
BsrDI GCAATG 1 cut(s) 1475
BsrI ACTGG 7 cut(s) 289, 309, 498, 625, 941, 1063, 1511
BssECI CCNNGG 6 cut(s) 394, 415, 416, 979, 1359, 1376
BssNI GRCGYC 1 cut(s) 478
BssT1I CCWWGG 2 cut(s) 394, 1359
Bst2UI CCWGG 3 cut(s) 417, 996, 2041
Bst6I CTCTTC 1 cut(s) 2216
BstACI GRCGYC 1 cut(s) 478
BstBAI YACGTR 2 cut(s) 595, 1667
BstBI TTCGAA 1 cut(s) 229
BstC8I GCNNGC 5 cut(s) 352, 430, 1228, 1624, 2390
BstDEI CTNAG 5 cut(s) 144, 482, 640, 1106, 1490
BstDSI CCRYGG 2 cut(s) 979, 1359
BstF5I GGATG 3 cut(s) 2049, 2057, 2256
BstFNI CGCG 1 cut(s) 1746
BstH2I RGCGCY 1 cut(s) 1988
BstHHI GCGC 1 cut(s) 1987
BstMAI GTCTC 2 cut(s) 1642, 2218
BstMCI CGRYCG 4 cut(s) 361, 439, 560, 585
BstMWI GCNNNNNNNGC 8 cut(s) 360, 405, 438, 465, 622, 870, 1984, 2029
BstNI CCWGG 3 cut(s) 417, 996, 2041
BstNSI RCATGY 1 cut(s) 216
BstSCI CCNGG 4 cut(s) 415, 994, 1376, 2039
BstSFI CTRYAG 2 cut(s) 888, 949
BstSNI TACGTA 2 cut(s) 595, 1667
BstUI CGCG 1 cut(s) 1746
BstV1I GCAGC 7 cut(s) 285, 341, 419, 483, 873, 1301, 1304
BstV2I GAAGAC 2 cut(s) 40, 1992
BstX2I RGATCY 5 cut(s) 496, 598, 1243, 1875, 2274
BstYI RGATCY 5 cut(s) 496, 598, 1243, 1875, 2274
BsuI GTATCC 1 cut(s) 815
BsuRI GGCC 6 cut(s) 42, 308, 399, 625, 1577, 2388
BtgI CCRYGG 2 cut(s) 979, 1359
BtsCI GGATG 3 cut(s) 2049, 2057, 2256
BtsIMutI CAGTG 6 cut(s) 263, 343, 491, 1530, 1687, 1858
Cac8I GCNNGC 5 cut(s) 352, 430, 1228, 1624, 2390
CaiI CAGNNNCTG 1 cut(s) 2365
CfoI GCGC 1 cut(s) 1987
Cfr13I GGNCC 7 cut(s) 521, 623, 911, 1351, 1814, 1913, 2178
Csp6I GTAC 7 cut(s) 6, 343, 421, 1734, 1866, 1948, 2448
CviAII CATG 3 cut(s) 213, 456, 1360
CviQI GTAC 7 cut(s) 6, 343, 421, 1734, 1866, 1948, 2448
DdeI CTNAG 5 cut(s) 144, 482, 640, 1106, 1490
DraI TTTAAA 1 cut(s) 1276
DrdI GACNNNNNNGTC 1 cut(s) 483
DseDI GACNNNNNNGTC 1 cut(s) 483
EaeI YGGCCR 1 cut(s) 306
Eam1104I CTCTTC 1 cut(s) 2216
EarI CTCTTC 1 cut(s) 2216
Eco105I TACGTA 2 cut(s) 595, 1667
Eco130I CCWWGG 2 cut(s) 394, 1359
Eco147I AGGCCT 2 cut(s) 42, 2388
Eco24I GRGCYC 1 cut(s) 1513
Eco32I GATATC 1 cut(s) 665
Eco47I GGWCC 6 cut(s) 521, 911, 1351, 1814, 1913, 2178
Eco47III AGCGCT 1 cut(s) 1986
Eco57I CTGAAG 3 cut(s) 30, 1620, 2214
EcoO109I RGGNCCY 1 cut(s) 1913
EcoRI GAATTC 1 cut(s) 74
EcoRII CCWGG 3 cut(s) 415, 994, 2039
EcoRV GATATC 1 cut(s) 665
EcoT14I CCWWGG 2 cut(s) 394, 1359
EcoT38I GRGCYC 1 cut(s) 1513
ErhI CCWWGG 2 cut(s) 394, 1359
FaeI CATG 3 cut(s) 216, 459, 1363
FalI AAGNNNNNCTT 4 cut(s) 109, 141, 2337, 2369
FaqI GGGAC 4 cut(s) 853, 1359, 1926, 2191
FatI CATG 3 cut(s) 212, 455, 1359
FbaI TGATCA 1 cut(s) 1459
FblI GTMKAC 2 cut(s) 585, 1076
FokI GGATG 3 cut(s) 2056, 2064, 2263
FriOI GRGCYC 1 cut(s) 1513
FspBI CTAG 6 cut(s) 38, 395, 726, 1541, 1560, 2093
GlaI GCGC 1 cut(s) 1986
GsaI CCCAGC 1 cut(s) 2060
GsuI CTGGAG 4 cut(s) 306, 978, 1218, 1926
HaeII RGCGCY 1 cut(s) 1988
HaeIII GGCC 6 cut(s) 42, 308, 399, 625, 1577, 2388
HapII CCGG 1 cut(s) 1378
HhaI GCGC 1 cut(s) 1987
Hin1I GRCGYC 1 cut(s) 478
Hin1II CATG 3 cut(s) 216, 459, 1363
Hin6I GCGC 1 cut(s) 1985
HinP1I GCGC 1 cut(s) 1985
HincII GTYRAC 2 cut(s) 586, 736
HindII GTYRAC 2 cut(s) 586, 736
HindIII AAGCTT 1 cut(s) 12
HinfI GANTC 6 cut(s) 179, 759, 1052, 1216, 1492, 2341
HpaII CCGG 1 cut(s) 1378
HphI GGTGA 2 cut(s) 1781, 2098
Hpy166II GTNNAC 7 cut(s) 521, 586, 736, 1077, 1664, 2185, 2374
Hpy188III TCNNGA 8 cut(s) 909, 1197, 1463, 1541, 1832, 1943, 2093, 2345
Hpy8I GTNNAC 7 cut(s) 521, 586, 736, 1077, 1664, 2185, 2374
Hpy99I CGWCG 1 cut(s) 1351
HpyAV CCTTC 2 cut(s) 812, 1146
HpyCH4IV ACGT 8 cut(s) 478, 576, 594, 842, 1280, 1666, 1824, 2370
HpyF10VI GCNNNNNNNGC 8 cut(s) 360, 405, 438, 465, 622, 870, 1984, 2029
HpyF3I CTNAG 5 cut(s) 144, 482, 640, 1106, 1490
HpySE526I ACGT 8 cut(s) 478, 576, 594, 842, 1280, 1666, 1824, 2370
Hsp92I GRCGYC 1 cut(s) 478
Hsp92II CATG 3 cut(s) 216, 459, 1363
HspAI GCGC 1 cut(s) 1985
Ksp22I TGATCA 1 cut(s) 1459
LmnI GCTCC 1 cut(s) 1046
Lsp1109I GCAGC 7 cut(s) 285, 341, 419, 483, 873, 1301, 1304
LweI GCATC 3 cut(s) 149, 716, 2116
MaeI CTAG 6 cut(s) 38, 395, 726, 1541, 1560, 2093
MaeII ACGT 8 cut(s) 478, 576, 594, 842, 1280, 1666, 1824, 2370
MaeIII GTNAC 8 cut(s) 215, 577, 677, 843, 896, 1684, 1936, 2104
MboII GAAGA 5 cut(s) 40, 125, 997, 1992, 2233
MflI RGATCY 5 cut(s) 496, 598, 1243, 1875, 2274
MhlI GDGCHC 2 cut(s) 772, 1513
MlsI TGGCCA 1 cut(s) 308
MluI ACGCGT 1 cut(s) 1744
MluNI TGGCCA 1 cut(s) 308
MlyI GAGTC 2 cut(s) 1501, 2350
MmeI TCCRAC 3 cut(s) 799, 1024, 1873
Mox20I TGGCCA 1 cut(s) 308
MscI TGGCCA 1 cut(s) 308
MseI TTAA 9 cut(s) 155, 1005, 1275, 1434, 1571, 2072, 2120, 2330, 2455
MslI CAYNNNNRTG 1 cut(s) 1994
Msp20I TGGCCA 1 cut(s) 308
MspA1I CMGCKG 4 cut(s) 276, 354, 432, 616
MspI CCGG 1 cut(s) 1378
MspR9I CCNGG 4 cut(s) 417, 996, 1378, 2041
MvaI CCWGG 3 cut(s) 417, 996, 2041
MvnI CGCG 1 cut(s) 1746
MwoI GCNNNNNNNGC 8 cut(s) 360, 405, 438, 465, 622, 870, 1984, 2029
NciI CCSGG 1 cut(s) 1378
NcoI CCATGG 1 cut(s) 1359
NlaIII CATG 3 cut(s) 216, 459, 1363
NlaIV GGNNCC 5 cut(s) 208, 523, 1353, 1914, 2179
NmuCI GTSAC 3 cut(s) 215, 677, 2104
NspI RCATGY 1 cut(s) 216
NspV TTCGAA 1 cut(s) 229
PasI CCCWGGG 1 cut(s) 416
PceI AGGCCT 2 cut(s) 42, 2388
PciI ACATGT 1 cut(s) 212
PcsI WCGNNNNNNNCGW 2 cut(s) 582, 591
PfeI GAWTC 4 cut(s) 179, 759, 1052, 1216
PfoI TCCNGGA 1 cut(s) 994
Ple19I CGATCG 1 cut(s) 560
PleI GAGTC 2 cut(s) 1500, 2349
PpsI GAGTC 2 cut(s) 1500, 2349
Ppu21I YACGTR 2 cut(s) 595, 1667
PpuMI RGGWCCY 1 cut(s) 1913
PscI ACATGT 1 cut(s) 212
PsiI TTATAA 1 cut(s) 1409
Psp1406I AACGTT 1 cut(s) 1280
Psp5II RGGWCCY 1 cut(s) 1913
Psp6I CCWGG 3 cut(s) 415, 994, 2039
PspFI CCCAGC 1 cut(s) 2056
PspGI CCWGG 3 cut(s) 415, 994, 2039
PspN4I GGNNCC 5 cut(s) 208, 523, 1353, 1914, 2179
PspPI GGNCC 7 cut(s) 521, 623, 911, 1351, 1814, 1913, 2178
PspPPI RGGWCCY 1 cut(s) 1913
PstNI CAGNNNCTG 1 cut(s) 2365
PsuI RGATCY 5 cut(s) 496, 598, 1243, 1875, 2274
PvuI CGATCG 1 cut(s) 560
PvuII CAGCTG 3 cut(s) 354, 432, 616
RsaI GTAC 7 cut(s) 7, 344, 422, 1735, 1867, 1949, 2449
RsaNI GTAC 7 cut(s) 6, 343, 421, 1734, 1866, 1948, 2448
RseI CAYNNNNRTG 1 cut(s) 1994
SalI GTCGAC 1 cut(s) 584
SaqAI TTAA 9 cut(s) 155, 1005, 1275, 1434, 1571, 2072, 2120, 2330, 2455
Sau96I GGNCC 7 cut(s) 521, 623, 911, 1351, 1814, 1913, 2178
SchI GAGTC 2 cut(s) 1501, 2350
ScrFI CCNGG 4 cut(s) 417, 996, 1378, 2041
SduI GDGCHC 2 cut(s) 772, 1513
SfaNI GCATC 3 cut(s) 149, 716, 2116
SfcI CTRYAG 2 cut(s) 888, 949
SfuI TTCGAA 1 cut(s) 229
SinI GGWCC 6 cut(s) 521, 911, 1351, 1814, 1913, 2178
SmiMI CAYNNNNRTG 1 cut(s) 1994
SmlI CTYRAG 1 cut(s) 96
SmoI CTYRAG 1 cut(s) 96
SnaBI TACGTA 2 cut(s) 595, 1667
SpeI ACTAGT 2 cut(s) 725, 1559
SseBI AGGCCT 2 cut(s) 42, 2388
SsiI CCGC 7 cut(s) 222, 276, 348, 361, 426, 439, 469
SspI AATATT 3 cut(s) 1024, 1453, 1649
SspMI CTAG 6 cut(s) 38, 395, 726, 1541, 1560, 2093
StuI AGGCCT 2 cut(s) 42, 2388
StyD4I CCNGG 4 cut(s) 415, 994, 1376, 2039
StyI CCWWGG 2 cut(s) 394, 1359
TaiI ACGT 8 cut(s) 481, 579, 597, 845, 1283, 1669, 1827, 2373
TaqI TCGA 5 cut(s) 229, 585, 698, 1118, 1536
TaqII GACCGA 1 cut(s) 570
TatI WGTACW 3 cut(s) 1733, 1865, 1947
TauI GCSGC 3 cut(s) 350, 428, 471
TfiI GAWTC 4 cut(s) 179, 759, 1052, 1216
Tru1I TTAA 9 cut(s) 155, 1005, 1275, 1434, 1571, 2072, 2120, 2330, 2455
Tru9I TTAA 9 cut(s) 155, 1005, 1275, 1434, 1571, 2072, 2120, 2330, 2455
TscAI CASTG 6 cut(s) 270, 343, 498, 1537, 1687, 1858
TseFI GTSAC 3 cut(s) 215, 677, 2104
TseI GCWGC 7 cut(s) 273, 354, 432, 471, 861, 1314, 1317
Tsp45I GTSAC 3 cut(s) 215, 677, 2104
TspDTI ATGAA 6 cut(s) 126, 916, 1239, 1389, 1895, 2421
TspGWI ACGGA 3 cut(s) 981, 1364, 1924
TspRI CASTG 6 cut(s) 270, 343, 498, 1537, 1687, 1858
VpaK11BI GGWCC 6 cut(s) 521, 911, 1351, 1814, 1913, 2178
XapI RAATTY 7 cut(s) 74, 544, 854, 1300, 1837, 2137, 2332
XbaI TCTAGA 2 cut(s) 1540, 2092
XceI RCATGY 1 cut(s) 216
XcmI CCANNNNNNNNNTGG 1 cut(s) 1503
XmaJI CCTAGG 1 cut(s) 394
XmiI GTMKAC 2 cut(s) 585, 1076
XspI CTAG 6 cut(s) 38, 395, 726, 1541, 1560, 2093
ZraI GACGTC 1 cut(s) 479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.