Rmu_sc0001706.1_g000039

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001706.1
Physical Location & Seq
Forward (+)
165747 .. 170147
4401 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001706.1_g000039.1.cds

Sequence Viewer

Length: 1425 bp
atgtttagggatctatcaagaaatcaactgactggctcaataccggacttggggggattgcaaaatcttcagtctctggatctatcaagtaatcaactgactggctccataccggacttcgggagattgcaaaacctttcgaagctatatctacacgacaactttctggaaggcactataccaccaaccttgggttcactggtgaatcttcaggaactgtatctccaggctaataacctatcaggctcaattcctgatgaattgggaaatctcgtcaatcttactcagttggatatttctgagaaccggctcactggtccgcttcccaaaacacttggaaatttgaggaatctcagcggcttctgggccacatccaataacttgaatgataaatttccggacacttacgggaaacttacaagtctaaaagagttttcaatatccgggaattatatctctggtctattacctgttgacatcataaagagctggactaatatcacaagtctgtcactcatgggaaacaattttaaaggaaatttgactaaagaagtattcaatttgccaaaccttcagcatctgcggataagtgacctggaaaatgctacatttgagttaccatcagacattacaaacaccaaatatatttctttgatactgaggaactgctcaatcaatggttccatccccaaatacattggtgatcaaatgacatctctaaagtacctagacttgagtttcaacagcttaactggtggacttccagagtatatgaaatcagatttagtttacatgtctttttccacaaataagcttaatgggatgatacctgcttggatccttcaggcagtccaaactagagatctatcattcaataatttgtcagtaccggactctggagtaccaataaaccaaaatctgaacttgtttgcttgctgccccaactccgcagacactgaaatgagggatccattagaaatgatgaatacatactgtccggaaaaggaacaaaaataccattctttgtttattaactgtggtggtggagaaacaactgttaatggagttacttatgagcaagataacgccacagcacccttcttcacaagtccaaataaaaactgggcttatagctttggaggttcttgggaaggaaatgccagttctagtgattacacgaagaacatgacatgtggagtttctgttgctgaggcaccttcgtatgatgctcgtctttcccctgtatctctcaagtactatgctttctgtctacgtgaaggcaaatacaatgtgacactcaagtttgctgaaattgtatacactgaagatacagactataccagtttgaggaagcgtgcattcgacatttatattcaggtaacaattttatttttcttttgtcatcactcatcaccttcattataa

Protein Analysis

474

Amino Acids

52.76

Weight (kDa)

5.03

Isoelectric Point (pI)

33.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1423
Acc36I ACCTGC 1 cut(s) 838
AccB1I GGYRCC 1 cut(s) 1213
AccI GTMKAC 2 cut(s) 1270, 1317
AccIII TCCGGA 2 cut(s) 397, 997
AciI CCGC 4 cut(s) 320, 357, 583, 948
AclWI GGATC 6 cut(s) 18, 87, 832, 845, 962, 975
AcsI RAATTY 3 cut(s) 340, 392, 538
AcuI CTGAAG 5 cut(s) 53, 194, 557, 827, 1344
AfaI GTAC 4 cut(s) 725, 888, 903, 1256
AfiI CCNNNNNNNGG 5 cut(s) 50, 119, 191, 896, 1347
AflIII ACRYGT 2 cut(s) 792, 1190
AgsI TTSAA 5 cut(s) 385, 438, 559, 742, 874
AjnI CCWGG 2 cut(s) 225, 594
AjuI GAANNNNNNNTTGG 2 cut(s) 178, 210
AloI GAACNNNNNNTCC 2 cut(s) 207, 239
AluBI AGCT 5 cut(s) 145, 489, 747, 814, 1134
AluI AGCT 5 cut(s) 145, 489, 747, 814, 1134
Alw26I GTCTC 1 cut(s) 78
AlwI GGATC 6 cut(s) 18, 87, 832, 845, 962, 975
AlwNI CAGNNNCTG 4 cut(s) 76, 217, 580, 956
Aor13HI TCCGGA 2 cut(s) 397, 997
AoxI GGCC 1 cut(s) 366
ApeKI GCWGC 1 cut(s) 936
ApoI RAATTY 3 cut(s) 340, 392, 538
AspS9I GGNCC 2 cut(s) 317, 366
AsuC2I CCSGG 1 cut(s) 445
AsuHPI GGTGA 3 cut(s) 214, 713, 1404
AsuII TTCGAA 1 cut(s) 140
AvaII GGWCC 1 cut(s) 317
BamHI GGATCC 2 cut(s) 837, 967
BanI GGYRCC 1 cut(s) 1213
BarI GAAGNNNNNNTAC 2 cut(s) 162, 194
BbvCI CCTCAGC 1 cut(s) 1209
BbvI GCAGC 1 cut(s) 923
BccI CCATC 2 cut(s) 628, 692
BciT130I CCWGG 2 cut(s) 227, 596
BclI TGATCA 1 cut(s) 703
BcnI CCSGG 1 cut(s) 445
BcoDI GTCTC 1 cut(s) 78
BfaI CTAG 3 cut(s) 728, 858, 1167
BfuAI ACCTGC 1 cut(s) 838
BglII AGATCT 1 cut(s) 862
BisI GCNGC 2 cut(s) 358, 937
BlsI GCNGC 2 cut(s) 359, 938
BmcAI AGTACT 1 cut(s) 1256
Bme1390I CCNGG 3 cut(s) 227, 445, 596
Bme18I GGWCC 1 cut(s) 317
BmgT120I GGNCC 2 cut(s) 317, 366
BmiI GGNNCC 5 cut(s) 106, 682, 839, 969, 1215
BmrFI CCNGG 3 cut(s) 227, 445, 596
BmrI ACTGGG 1 cut(s) 1132
BmsI GCATC 2 cut(s) 586, 1216
BmuI ACTGGG 1 cut(s) 1132
BpmI CTGGAG 2 cut(s) 209, 918
Bpu10I CCTNAGC 1 cut(s) 1209
Bpu14I TTCGAA 1 cut(s) 140
BpuEI CTTGAG 3 cut(s) 754, 1235, 1283
BpuMI CCSGG 1 cut(s) 445
BsaAI YACGTR 1 cut(s) 1274
BsaJI CCNNGG 1 cut(s) 189
BsaWI WCCGGW 5 cut(s) 43, 112, 397, 889, 997
BsaXI ACNNNNNCTCC 4 cut(s) 207, 237, 1188, 1218
Bsc4I CCNNNNNNNGG 5 cut(s) 50, 119, 191, 896, 1347
Bse118I RCCGGY 1 cut(s) 306
Bse1I ACTGG 8 cut(s) 37, 106, 204, 319, 757, 1127, 1161, 1341
BseAI TCCGGA 2 cut(s) 397, 997
BseBI CCWGG 2 cut(s) 227, 596
BseDI CCNNGG 1 cut(s) 189
BseGI GGATG 3 cut(s) 371, 684, 828
BseLI CCNNNNNNNGG 5 cut(s) 50, 119, 191, 896, 1347
BseMII CTCAG 5 cut(s) 291, 299, 367, 650, 1200
BseNI ACTGG 8 cut(s) 37, 106, 204, 319, 757, 1127, 1161, 1341
BseXI GCAGC 1 cut(s) 923
BshFI GGCC 1 cut(s) 368
BshNI GGYRCC 1 cut(s) 1213
BsiSI CCGG 7 cut(s) 44, 113, 307, 398, 444, 890, 998
BslI CCNNNNNNNGG 5 cut(s) 50, 119, 191, 896, 1347
BsmAI GTCTC 1 cut(s) 78
BsmI GAATGC 1 cut(s) 1358
BsnI GGCC 1 cut(s) 368
Bsp119I TTCGAA 1 cut(s) 140
Bsp13I TCCGGA 2 cut(s) 397, 997
Bsp143I GATC 6 cut(s) 10, 79, 703, 837, 862, 967
BspACI CCGC 4 cut(s) 320, 357, 583, 948
BspANI GGCC 1 cut(s) 368
BspCNI CTCAG 5 cut(s) 292, 298, 366, 651, 1201
BspEI TCCGGA 2 cut(s) 397, 997
BspLI GGNNCC 5 cut(s) 106, 682, 839, 969, 1215
BspMI ACCTGC 1 cut(s) 838
BspPI GGATC 6 cut(s) 18, 87, 832, 845, 962, 975
BspT104I TTCGAA 1 cut(s) 140
BspT107I GGYRCC 1 cut(s) 1213
BsrFI RCCGGY 1 cut(s) 306
BsrI ACTGG 8 cut(s) 37, 106, 204, 319, 757, 1127, 1161, 1341
BssAI RCCGGY 1 cut(s) 306
BssECI CCNNGG 1 cut(s) 189
BssMI GATC 6 cut(s) 10, 79, 703, 837, 862, 967
BssNAI GTATAC 1 cut(s) 1318
BssT1I CCWWGG 1 cut(s) 189
Bst1107I GTATAC 1 cut(s) 1318
Bst2UI CCWGG 2 cut(s) 227, 596
Bst4CI ACNGT 4 cut(s) 219, 995, 1037, 1057
BstBAI YACGTR 1 cut(s) 1274
BstBI TTCGAA 1 cut(s) 140
BstC8I GCNNGC 2 cut(s) 934, 1356
BstDEI CTNAG 5 cut(s) 285, 300, 353, 659, 1209
BstF5I GGATG 3 cut(s) 371, 684, 828
BstKTI GATC 6 cut(s) 13, 82, 706, 840, 865, 970
BstMAI GTCTC 1 cut(s) 78
BstMBI GATC 6 cut(s) 10, 79, 703, 837, 862, 967
BstNI CCWGG 2 cut(s) 227, 596
BstNSI RCATGY 2 cut(s) 796, 1194
BstSCI CCNGG 3 cut(s) 225, 443, 594
BstV1I GCAGC 1 cut(s) 923
BstX2I RGATCY 5 cut(s) 10, 79, 837, 862, 967
BstYI RGATCY 5 cut(s) 10, 79, 837, 862, 967
BstZ17I GTATAC 1 cut(s) 1318
BsuRI GGCC 1 cut(s) 368
BtsCI GGATG 3 cut(s) 371, 684, 828
BtsIMutI CAGTG 4 cut(s) 197, 312, 954, 1320
BveI ACCTGC 1 cut(s) 838
Cac8I GCNNGC 2 cut(s) 934, 1356
CaiI CAGNNNCTG 4 cut(s) 76, 217, 580, 956
Cfr10I RCCGGY 1 cut(s) 306
Cfr13I GGNCC 2 cut(s) 317, 366
Csp6I GTAC 4 cut(s) 724, 887, 902, 1255
CspCI CAANNNNNGTGG 2 cut(s) 171, 206
CviAII CATG 4 cut(s) 517, 793, 1186, 1191
CviQI GTAC 4 cut(s) 724, 887, 902, 1255
DdeI CTNAG 5 cut(s) 285, 300, 353, 659, 1209
DpnI GATC 6 cut(s) 12, 81, 705, 839, 864, 969
DpnII GATC 6 cut(s) 10, 79, 703, 837, 862, 967
DraI TTTAAA 1 cut(s) 532
Eco130I CCWWGG 1 cut(s) 189
Eco47I GGWCC 1 cut(s) 317
Eco57I CTGAAG 5 cut(s) 53, 194, 557, 827, 1344
EcoRII CCWGG 2 cut(s) 225, 594
EcoT14I CCWWGG 1 cut(s) 189
ErhI CCWWGG 1 cut(s) 189
FaeI CATG 4 cut(s) 520, 796, 1189, 1194
FatI CATG 4 cut(s) 516, 792, 1185, 1190
FbaI TGATCA 1 cut(s) 703
FblI GTMKAC 2 cut(s) 1270, 1317
Fnu4HI GCNGC 2 cut(s) 358, 937
FokI GGATG 3 cut(s) 358, 671, 835
Fsp4HI GCNGC 2 cut(s) 358, 937
FspBI CTAG 3 cut(s) 728, 858, 1167
GluI GCNGC 2 cut(s) 358, 937
GsuI CTGGAG 2 cut(s) 209, 918
HaeIII GGCC 1 cut(s) 368
HapII CCGG 7 cut(s) 44, 113, 307, 398, 444, 890, 998
Hin1II CATG 4 cut(s) 520, 796, 1189, 1194
HincII GTYRAC 1 cut(s) 475
HindII GTYRAC 1 cut(s) 475
HindIII AAGCTT 1 cut(s) 812
HinfI GANTC 3 cut(s) 205, 349, 893
HpaII CCGG 7 cut(s) 44, 113, 307, 398, 444, 890, 998
HphI GGTGA 3 cut(s) 214, 713, 1404
Hpy166II GTNNAC 6 cut(s) 197, 475, 758, 790, 1271, 1318
Hpy188I TCNGA 4 cut(s) 301, 625, 781, 921
Hpy8I GTNNAC 6 cut(s) 197, 475, 758, 790, 1271, 1318
HpyAV CCTTC 8 cut(s) 164, 581, 851, 1108, 1145, 1227, 1271, 1425
HpyCH4III ACNGT 4 cut(s) 219, 995, 1037, 1057
HpyCH4IV ACGT 1 cut(s) 1273
HpyCH4V TGCA 3 cut(s) 61, 130, 1358
HpyF3I CTNAG 5 cut(s) 285, 300, 353, 659, 1209
HpySE526I ACGT 1 cut(s) 1273
Hsp92II CATG 4 cut(s) 520, 796, 1189, 1194
Kpn2I TCCGGA 2 cut(s) 397, 997
Ksp22I TGATCA 1 cut(s) 703
Kzo9I GATC 6 cut(s) 10, 79, 703, 837, 862, 967
LmnI GCTCC 1 cut(s) 110
Lsp1109I GCAGC 1 cut(s) 923
LweI GCATC 2 cut(s) 586, 1216
MaeI CTAG 3 cut(s) 728, 858, 1167
MaeII ACGT 1 cut(s) 1273
MaeIII GTNAC 6 cut(s) 510, 590, 615, 1066, 1291, 1378
MalI GATC 6 cut(s) 12, 81, 705, 839, 864, 969
MboI GATC 6 cut(s) 10, 79, 703, 837, 862, 967
MboII GAAGA 5 cut(s) 59, 200, 1093, 1192, 1337
MflI RGATCY 5 cut(s) 10, 79, 837, 862, 967
MlyI GAGTC 1 cut(s) 887
MmeI TCCRAC 1 cut(s) 270
MnlI CCTC 6 cut(s) 339, 654, 957, 1133, 1204, 1341
MroI TCCGGA 2 cut(s) 397, 997
MseI TTAA 5 cut(s) 531, 749, 816, 1032, 1059
MslI CAYNNNNRTG 1 cut(s) 959
MspA1I CMGCKG 1 cut(s) 357
MspI CCGG 7 cut(s) 44, 113, 307, 398, 444, 890, 998
MspR9I CCNGG 3 cut(s) 227, 445, 596
Mva1269I GAATGC 1 cut(s) 1358
MvaI CCWGG 2 cut(s) 227, 596
NciI CCSGG 1 cut(s) 445
NdeII GATC 6 cut(s) 10, 79, 703, 837, 862, 967
NlaIII CATG 4 cut(s) 520, 796, 1189, 1194
NlaIV GGNNCC 5 cut(s) 106, 682, 839, 969, 1215
NmuCI GTSAC 3 cut(s) 510, 590, 1291
NspI RCATGY 2 cut(s) 796, 1194
NspV TTCGAA 1 cut(s) 140
PciI ACATGT 2 cut(s) 792, 1190
PctI GAATGC 1 cut(s) 1358
PfeI GAWTC 2 cut(s) 205, 349
PfoI TCCNGGA 1 cut(s) 443
PkrI GCNGC 2 cut(s) 359, 938
PleI GAGTC 1 cut(s) 887
PpsI GAGTC 1 cut(s) 887
Ppu21I YACGTR 1 cut(s) 1274
PscI ACATGT 2 cut(s) 792, 1190
PsiI TTATAA 1 cut(s) 1423
Psp6I CCWGG 2 cut(s) 225, 594
PspGI CCWGG 2 cut(s) 225, 594
PspN4I GGNNCC 5 cut(s) 106, 682, 839, 969, 1215
PspPI GGNCC 2 cut(s) 317, 366
PstNI CAGNNNCTG 4 cut(s) 76, 217, 580, 956
PsuI RGATCY 5 cut(s) 10, 79, 837, 862, 967
RsaI GTAC 4 cut(s) 725, 888, 903, 1256
RsaNI GTAC 4 cut(s) 724, 887, 902, 1255
RseI CAYNNNNRTG 1 cut(s) 959
SaqAI TTAA 5 cut(s) 531, 749, 816, 1032, 1059
SatI GCNGC 2 cut(s) 358, 937
Sau3AI GATC 6 cut(s) 10, 79, 703, 837, 862, 967
Sau96I GGNCC 2 cut(s) 317, 366
ScaI AGTACT 1 cut(s) 1256
SchI GAGTC 1 cut(s) 887
ScrFI CCNGG 3 cut(s) 227, 445, 596
SfaNI GCATC 2 cut(s) 586, 1216
SfuI TTCGAA 1 cut(s) 140
SinI GGWCC 1 cut(s) 317
SmiMI CAYNNNNRTG 1 cut(s) 959
SmlI CTYRAG 3 cut(s) 733, 1250, 1298
SmoI CTYRAG 3 cut(s) 733, 1250, 1298
SsiI CCGC 4 cut(s) 320, 357, 583, 948
SspMI CTAG 3 cut(s) 728, 858, 1167
StyD4I CCNGG 3 cut(s) 225, 443, 594
StyI CCWWGG 1 cut(s) 189
TaaI ACNGT 4 cut(s) 219, 995, 1037, 1057
TaiI ACGT 1 cut(s) 1276
TaqI TCGA 2 cut(s) 140, 1362
TatI WGTACW 1 cut(s) 1254
TauI GCSGC 1 cut(s) 360
TfiI GAWTC 2 cut(s) 205, 349
Tru1I TTAA 5 cut(s) 531, 749, 816, 1032, 1059
Tru9I TTAA 5 cut(s) 531, 749, 816, 1032, 1059
TscAI CASTG 4 cut(s) 204, 319, 961, 1327
TseFI GTSAC 3 cut(s) 510, 590, 1291
TseI GCWGC 1 cut(s) 936
Tsp45I GTSAC 3 cut(s) 510, 590, 1291
TspDTI ATGAA 4 cut(s) 273, 788, 998, 1407
TspRI CASTG 4 cut(s) 204, 319, 961, 1327
VpaK11BI GGWCC 1 cut(s) 317
XapI RAATTY 3 cut(s) 340, 392, 538
XceI RCATGY 2 cut(s) 796, 1194
XcmI CCANNNNNNNNNTGG 1 cut(s) 1119
XmiI GTMKAC 2 cut(s) 1270, 1317
XspI CTAG 3 cut(s) 728, 858, 1167
ZrmI AGTACT 1 cut(s) 1256
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.