Rh5DG009900

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
652209 .. 679522
27314 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG009900.1

Sequence Viewer

Length: 1968 bp
ATGAAACTTAGGAATGGGAAAATGAAATTGACGTTACTTTCCGGATATGACAGCGCTCATGCCAAACGCTCTACGCTCGACCTGGATCTTTCAAACAATCAGCTGACTGGGCCTATACCAGAGAGCTTAGGGAATTTAAGTTTCGCCAGCTATATTGATCTGCATGATAACTTTCTCGACGGCTCTATACCAGCATCTTTGGGTAGAATGACTAGTTTGGTTCGACTGGATTTGCATAACAATGGAATCTCTGGTACTCTCCCACGAACACTTGGAAATTTGACAGAGCTTCAAACCTTCGACGTCGCATCCAACAGTATCACTGGGACGTTACCAAAAAAATTTGCCAGCCTTGAGAGCCTGTATGAATTTTCTGTAGCTGGTAACTATTTGTCTGGCCCTTTCCCTGACTTCATAGCCAACTGGACTTCAATCTGGGAACTTTTGCTCAACGGAAACAATTTCCACGGAAAGATACCTGTCGGGATTTTTAATTTATCAAGTCTACGATATTTGGCAATAAGTGATGTCGGAGCAAACTCTCATTTCCGGTTCCCACCATCAACACATGTGACGACAAGTTTTCGTATTTTGATACTAAGAAACTGCTCAATCACTGGTGAAATTCCTTCCTACATTGGAAATATGTCATCATTATGGAACCTAGACCTGAGCTTCAACAGCTTAACGGGCAGAATCCCAGATTCTTTGAAAAACTTAAATTTAAGTTGGATGTCTTTTCCAAACAATATGCTTACTGGGGAAATTCCTAATTGGATTCAAAATTCAGTCTGGAGTAAGATGGATCTTTCATACAATAATTTTTCAAAACCAACCTTTGAAATACCATCCAGCTTAGACTCGAATTTGTTTTCTTGTTGCTGTAACTCCTCAATCTGTCTGCCAAATACGTATGACTGGGCGGACCCAACCACGGAGAAGTATTGTCCCCGGGGAAAACCTAATTACCATTCATTGTTTATAAATTGTGGTGGTGGGACACTTGACAACGTTGATGGAAATATTTACGATGAAGATAACGAGACATCGCAGTTTCACCGGAGTCCAAAAAGAAACTGGGCTCGAATTAGTGCTGGAAACACCGTCGACCTTGACTATGCTTCCAATTCAAGTAAAGTTTTAAAAAGCGTGAGATGTGGGCTTTCCTCTGAAGCACCTTTATACGATAGAGCTCGCACTTCTCCTGTCTCTCTAAAATATTACGGGTTCTGTTTACGTAAAGGCAAATACAATGTAACACTTCACTTTGCTGAAATTGTTGATGAGGATAACGAGTACAGAAATACAACGAAACGCGTATTTGATGTATATATACAGGCTTGTGATTTACAGCGAAAAGGAAAACTGGTGGACTTGGTTGATAAAACCTTGTCTAACAAGTATGATGCAAAACAAGCCATCATCATCTTGAATTTAGCAGTAATGTGCATAAATATATCGCCAACTCTGAGGCCTACTATGTCTGAAGTTTTGAGTGTTCTCGTTGGCGACAAAAAAATTGAGGAGATTTGTTCCCCTGCCCTGAAGGAGCCGATTAAGGACATCAACGACCCCCACGTGAATGAGATCGCGGAGTTCGCGGTGTCGGAGTACAACAAGAAATCCGGGAAGAAGCTGAAGTTACGGAGCGTGGTGAAGGGCGAGACTCAGGTTGTCGCAGGTGAGAATTACCGGCTCGTCATCGTCGTTGAGGATAACTCGGCGGCGGCCAAGTATGAGGGCGTTGTGTACGAGAGGATTTGGGAGCATACTAGGGAATTGCTCTCCTTCGATAGTCACATTGCTCAAGTTGATTCCACTGTTTCTATGGAAGTAACCTCGAAAGCATCCACGTCATCCAATTTGATCAAAGTGGAAGATGAAACAGAACACATTTCTCTTGATGAAGAAAAGCTTGAAGAAGAAGAAAGAAGCAGAGGAAATAGAGAGGCTATACTGTTGTATTGA

Protein Analysis

655

Amino Acids

73.23

Weight (kDa)

5.73

Isoelectric Point (pI)

37.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 68 - 264 6.2e-08 Leucine-rich repeat region
LRR_8 PF13855 72 - 131 1.2e-06 Leucine rich repeat
Malectin PF11721 325 - 447 1.2e-16 Malectin domain
Cystatin PF00031 518 - 576 1.1e-12 Cystatin domain
SQAPI PF16845 519 - 598 3e-31 Aspartic acid proteinase inhibitor
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000236)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800 FvH4_3g00800
malus_domestica MD00G1124000.v1.1 MD10G1333200.v1.1 MD10G1333300.v1.1 MD10G1333800.v1.1 MD10G1333900.v1.1 MD10G1334000.v1.1 MD10G1334300.v1.1 MD10G1334500.v1.1 MD10G1334600.v1.1
prunus_persica Prupe.6G125000_v2.0.a1 Prupe.6G126100_v2.0.a1
pyrus_communis pycom10g28270 pycom10g28410 pycom10g28420 pycom10g28430
rosa_chinensis RchiOBHm_Chr1g0337521 RchiOBHm_Chr1g0337731 RchiOBHm_Chr3g0485891 RchiOBHm_Chr4g0391431 RchiOBHm_Chr4g0391551 RchiOBHm_Chr4g0391571 RchiOBHm_Chr4g0391641 RchiOBHm_Chr4g0391651 RchiOBHm_Chr4g0391661 RchiOBHm_Chr4g0391791 RchiOBHm_Chr4g0409301 RchiOBHm_Chr5g0001061 RchiOBHm_Chr5g0001201 RchiOBHm_Chr5g0001251 RchiOBHm_Chr5g0001261 RchiOBHm_Chr5g0001271 RchiOBHm_Chr5g0040441 RchiOBHm_Chr6g0279971
rosa_laevigata RLG00000009856 RLG00000009862 RLG00000029911 RLG00000030125 RLG00000030918
rosa_multiflora Rmu_co8113804.1_g000001 Rmu_sc0000255.1_g000042 Rmu_sc0001174.1_g000026 Rmu_sc0001706.1_g000014 Rmu_sc0001706.1_g000017 Rmu_sc0001706.1_g000032 Rmu_sc0001706.1_g000039 Rmu_sc0002377.1_g000003 Rmu_sc0002772.1_g000022 Rmu_sc0004189.1_g000005 Rmu_sc0004189.1_g000025 Rmu_sc0004189.1_g000033 Rmu_sc0004862.1_g000015 Rmu_sc0004876.1_g000018 Rmu_sc0014338.1_g000004 Rmu_sc0024491.1_g000002 Rmu_sc0042682.1_g000001
rosa_roxburghii Rroxscaffold_1G00005720 Rroxscaffold_1G00040220 Rroxscaffold_1G00040230 Rroxscaffold_1G00040260 Rroxscaffold_1G00050150 Rroxscaffold_1G00050170 Rroxscaffold_1G00075050 Rroxscaffold_1G00075070 Rroxscaffold_1G00075080 Rroxscaffold_1G00075110 Rroxscaffold_1G00075170 Rroxscaffold_1G00075230 Rroxscaffold_3G00274520 Rroxscaffold_4G00314190 Rroxscaffold_4G00314200 Rroxscaffold_5G00334510 Rroxscaffold_5G00337150 Rroxscaffold_5G00353810 Rroxscaffold_6G00396280 Rroxscaffold_7G00198980
rosa_rugosa Rorug03G0336100 Rorug04G0092200 Rorug04G0389300 Rorug04G0389500 Rorug04G0389500 Rorug05G0185000
rosa_samantha Rh1CG145400 Rh3AG271500 Rh4AG037800 Rh4AG037900 Rh4AG038600 Rh4AG155300 Rh4BG031900 Rh4BG032700 Rh4BG152800 Rh4BG153100 Rh4CG040900 Rh4CG041000 Rh4CG041200 Rh4DG035300 Rh4DG035400 Rh4DG148200 Rh5AG008600 Rh5AG008700 Rh5AG009000 Rh5AG009300 Rh5AG272100 Rh5BG010700 Rh5BG010800 Rh5BG011200 Rh5BG011700 Rh5BG011800 Rh5BG012100 Rh5BG012200 Rh5BG012300 Rh5CG009300 Rh5CG009800 Rh5CG009900 Rh5CG308100 Rh5CG308200 Rh5CG309500 Rh5DG009500 Rh5DG009900 Rh5DG284400 Rh5DG284500
rosa_wichuraiana Rw1G012750 Rw4G002940 Rw4G002980 Rw4G012680 Rw5G000870 Rw5G000940 Rw5G000970 Rw5G025480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 983
AarI CACCTGC 1 cut(s) 1670
AatII GACGTC 1 cut(s) 306
Acc36I ACCTGC 1 cut(s) 1670
AccI GTMKAC 2 cut(s) 505, 1107
AccII CGCG 3 cut(s) 1317, 1592, 1601
AccIII TCCGGA 1 cut(s) 41
AciI CCGC 5 cut(s) 923, 1592, 1601, 1724, 1727
AclI AACGTT 1 cut(s) 1011
AclWI GGATC 2 cut(s) 93, 813
AcoI YGGCCR 1 cut(s) 1728
AcuI CTGAAG 4 cut(s) 1191, 1506, 1565, 1658
AcvI CACGTG 1 cut(s) 1579
AcyI GRCGYC 1 cut(s) 303
AfaI GTAC 4 cut(s) 256, 1298, 1613, 1751
AfeI AGCGCT 1 cut(s) 55
AfiI CCNNNNNNNGG 1 cut(s) 934
AflIII ACRYGT 2 cut(s) 568, 1315
AhlI ACTAGT 1 cut(s) 212
AjiI CACGTC 1 cut(s) 1854
AjnI CCWGG 1 cut(s) 81
Alw21I GWGCWC 1 cut(s) 1195
Alw26I GTCTC 3 cut(s) 1037, 1213, 1658
AlwI GGATC 2 cut(s) 93, 813
Ama87I CYCGRG 1 cut(s) 951
Aor13HI TCCGGA 1 cut(s) 41
Aor51HI AGCGCT 1 cut(s) 55
AoxI GGCC 4 cut(s) 110, 397, 1472, 1728
AspLEI GCGC 1 cut(s) 56
AspS9I GGNCC 3 cut(s) 110, 398, 925
AsuC2I CCSGG 3 cut(s) 952, 953, 1627
AsuHPI GGTGA 4 cut(s) 632, 1049, 1666, 1694
AvaI CYCGRG 1 cut(s) 951
AvaII GGWCC 1 cut(s) 925
BanII GRGCYC 2 cut(s) 1084, 1195
BbrPI CACGTG 1 cut(s) 1579
Bbv12I GWGCWC 1 cut(s) 1195
BccI CCATC 5 cut(s) 568, 796, 856, 1010, 1427
BceAI ACGGC 1 cut(s) 196
BciT130I CCWGG 1 cut(s) 83
BclI TGATCA 1 cut(s) 1866
BcnI CCSGG 3 cut(s) 952, 953, 1627
BcoDI GTCTC 3 cut(s) 1037, 1213, 1658
BcuI ACTAGT 1 cut(s) 212
BfaI CTAG 3 cut(s) 213, 665, 1773
BfmI CTRYAG 1 cut(s) 375
BfoI RGCGCY 1 cut(s) 57
BfuAI ACCTGC 1 cut(s) 1670
BisI GCNGC 2 cut(s) 1725, 1728
BlsI GCNGC 2 cut(s) 1726, 1729
Bme1390I CCNGG 4 cut(s) 83, 952, 953, 1627
Bme18I GGWCC 1 cut(s) 925
BmeT110I CYCGRG 1 cut(s) 951
BmgBI CACGTC 1 cut(s) 1854
BmgT120I GGNCC 3 cut(s) 110, 398, 925
BmiI GGNNCC 4 cut(s) 554, 662, 927, 1551
BmrFI CCNGG 4 cut(s) 83, 952, 953, 1627
BmrI ACTGGG 5 cut(s) 117, 333, 768, 928, 1087
BmsI GCATC 4 cut(s) 203, 317, 1396, 1856
BmuI ACTGGG 5 cut(s) 117, 333, 768, 928, 1087
BplI GAGNNNNNCTC 2 cut(s) 1703, 1735
BpmI CTGGAG 1 cut(s) 814
Bpu10I CCTNAGC 2 cut(s) 127, 671
BpuEI CTTGAG 2 cut(s) 374, 1791
BpuMI CCSGG 3 cut(s) 952, 953, 1627
BsaAI YACGTR 3 cut(s) 912, 1238, 1579
BsaHI GRCGYC 1 cut(s) 303
BsaJI CCNNGG 5 cut(s) 466, 933, 950, 951, 952
BsaWI WCCGGW 3 cut(s) 41, 549, 1059
Bsc4I CCNNNNNNNGG 1 cut(s) 934
Bse118I RCCGGY 1 cut(s) 1692
Bse1I ACTGG 9 cut(s) 112, 231, 328, 428, 622, 763, 923, 1082, 1371
Bse3DI GCAATG 1 cut(s) 1800
BseAI TCCGGA 1 cut(s) 41
BseBI CCWGG 1 cut(s) 83
BseDI CCNNGG 5 cut(s) 466, 933, 950, 951, 952
BseGI GGATG 5 cut(s) 308, 738, 848, 1847, 1856
BseLI CCNNNNNNNGG 1 cut(s) 934
BseMI GCAATG 1 cut(s) 1800
BseMII CTCAG 3 cut(s) 662, 1460, 1682
BseNI ACTGG 9 cut(s) 112, 231, 328, 428, 622, 763, 923, 1082, 1371
BseRI GAGGAG 2 cut(s) 880, 1538
Bsh1236I CGCG 3 cut(s) 1317, 1592, 1601
BshFI GGCC 4 cut(s) 112, 399, 1474, 1730
BsiHKAI GWGCWC 1 cut(s) 1195
BsiHKCI CYCGRG 1 cut(s) 951
BsiSI CCGG 6 cut(s) 42, 550, 952, 1060, 1626, 1693
BslFI GGGAC 3 cut(s) 340, 933, 1012
BslI CCNNNNNNNGG 1 cut(s) 934
BsmAI GTCTC 3 cut(s) 1037, 1213, 1658
BsmFI GGGAC 3 cut(s) 340, 933, 1012
BsnI GGCC 4 cut(s) 112, 399, 1474, 1730
BsoBI CYCGRG 1 cut(s) 951
Bsp1286I GDGCHC 2 cut(s) 1084, 1195
Bsp13I TCCGGA 1 cut(s) 41
Bsp143I GATC 5 cut(s) 85, 157, 805, 1587, 1866
BspACI CCGC 5 cut(s) 923, 1592, 1601, 1724, 1727
BspANI GGCC 4 cut(s) 112, 399, 1474, 1730
BspCNI CTCAG 3 cut(s) 663, 1461, 1681
BspEI TCCGGA 1 cut(s) 41
BspFNI CGCG 3 cut(s) 1317, 1592, 1601
BspLI GGNNCC 4 cut(s) 554, 662, 927, 1551
BspMI ACCTGC 1 cut(s) 1670
BspPI GGATC 2 cut(s) 93, 813
BsrDI GCAATG 1 cut(s) 1800
BsrFI RCCGGY 1 cut(s) 1692
BsrI ACTGG 9 cut(s) 112, 231, 328, 428, 622, 763, 923, 1082, 1371
BssAI RCCGGY 1 cut(s) 1692
BssECI CCNNGG 5 cut(s) 466, 933, 950, 951, 952
BssMI GATC 5 cut(s) 85, 157, 805, 1587, 1866
BssNI GRCGYC 1 cut(s) 303
Bst2UI CCWGG 1 cut(s) 83
Bst4CI ACNGT 4 cut(s) 317, 1105, 1822, 1959
BstACI GRCGYC 1 cut(s) 303
BstBAI YACGTR 3 cut(s) 912, 1238, 1579
BstC8I GCNNGC 3 cut(s) 148, 349, 1195
BstDEI CTNAG 7 cut(s) 8, 127, 599, 671, 856, 1469, 1668
BstDSI CCRYGG 2 cut(s) 466, 933
BstF5I GGATG 5 cut(s) 308, 738, 848, 1847, 1856
BstFNI CGCG 3 cut(s) 1317, 1592, 1601
BstH2I RGCGCY 1 cut(s) 57
BstHHI GCGC 1 cut(s) 56
BstKTI GATC 5 cut(s) 88, 160, 808, 1590, 1869
BstMAI GTCTC 3 cut(s) 1037, 1213, 1658
BstMBI GATC 5 cut(s) 85, 157, 805, 1587, 1866
BstMWI GCNNNNNNNGC 6 cut(s) 109, 357, 681, 690, 1415, 1598
BstNI CCWGG 1 cut(s) 83
BstNSI RCATGY 1 cut(s) 572
BstSCI CCNGG 4 cut(s) 81, 950, 951, 1625
BstSFI CTRYAG 1 cut(s) 375
BstSNI TACGTA 2 cut(s) 912, 1238
BstUI CGCG 3 cut(s) 1317, 1592, 1601
BstX2I RGATCY 2 cut(s) 85, 805
BstYI RGATCY 2 cut(s) 85, 805
BsuRI GGCC 4 cut(s) 112, 399, 1474, 1730
BtgI CCRYGG 2 cut(s) 466, 933
BtgZI GCGATG 1 cut(s) 1032
BtrI CACGTC 1 cut(s) 1854
BtsCI GGATG 5 cut(s) 308, 738, 848, 1847, 1856
BtsIMutI CAGTG 3 cut(s) 321, 615, 1818
BveI ACCTGC 1 cut(s) 1670
Cac8I GCNNGC 3 cut(s) 148, 349, 1195
CfoI GCGC 1 cut(s) 56
Cfr10I RCCGGY 1 cut(s) 1692
Cfr13I GGNCC 3 cut(s) 110, 398, 925
Cfr9I CCCGGG 1 cut(s) 951
Csp6I GTAC 4 cut(s) 255, 1297, 1612, 1750
CviAII CATG 3 cut(s) 59, 164, 569
CviQI GTAC 4 cut(s) 255, 1297, 1612, 1750
DdeI CTNAG 7 cut(s) 8, 127, 599, 671, 856, 1469, 1668
DpnI GATC 5 cut(s) 87, 159, 807, 1589, 1868
DpnII GATC 5 cut(s) 85, 157, 805, 1587, 1866
DraI TTTAAA 1 cut(s) 1143
EaeI YGGCCR 1 cut(s) 1728
EciI GGCGGA 1 cut(s) 938
Ecl136II GAGCTC 1 cut(s) 1193
Eco105I TACGTA 2 cut(s) 912, 1238
Eco147I AGGCCT 1 cut(s) 1474
Eco24I GRGCYC 2 cut(s) 1084, 1195
Eco47I GGWCC 1 cut(s) 925
Eco47III AGCGCT 1 cut(s) 55
Eco53kI GAGCTC 1 cut(s) 1193
Eco57I CTGAAG 4 cut(s) 1191, 1506, 1565, 1658
Eco72I CACGTG 1 cut(s) 1579
Eco88I CYCGRG 1 cut(s) 951
EcoICRI GAGCTC 1 cut(s) 1193
EcoRII CCWGG 1 cut(s) 81
EcoT38I GRGCYC 2 cut(s) 1084, 1195
FaeI CATG 3 cut(s) 62, 167, 572
FalI AAGNNNNNCTT 2 cut(s) 1899, 1931
FaqI GGGAC 3 cut(s) 340, 933, 1012
FatI CATG 3 cut(s) 58, 163, 568
FbaI TGATCA 1 cut(s) 1866
FblI GTMKAC 2 cut(s) 505, 1107
Fnu4HI GCNGC 2 cut(s) 1725, 1728
FokI GGATG 5 cut(s) 295, 745, 835, 1834, 1843
FriOI GRGCYC 2 cut(s) 1084, 1195
Fsp4HI GCNGC 2 cut(s) 1725, 1728
FspBI CTAG 3 cut(s) 213, 665, 1773
GlaI GCGC 1 cut(s) 55
GluI GCNGC 2 cut(s) 1725, 1728
GsuI CTGGAG 1 cut(s) 814
HaeII RGCGCY 1 cut(s) 57
HaeIII GGCC 4 cut(s) 112, 399, 1474, 1730
HapII CCGG 6 cut(s) 42, 550, 952, 1060, 1626, 1693
HhaI GCGC 1 cut(s) 56
Hin1I GRCGYC 1 cut(s) 303
Hin1II CATG 3 cut(s) 62, 167, 572
Hin6I GCGC 1 cut(s) 54
HinP1I GCGC 1 cut(s) 54
HincII GTYRAC 1 cut(s) 1108
HindII GTYRAC 1 cut(s) 1108
HindIII AAGCTT 1 cut(s) 1913
HinfI GANTC 8 cut(s) 246, 696, 704, 778, 860, 1063, 1666, 1814
HpaII CCGG 6 cut(s) 42, 550, 952, 1060, 1626, 1693
HphI GGTGA 4 cut(s) 632, 1049, 1666, 1694
Hpy166II GTNNAC 5 cut(s) 506, 1108, 1235, 1372, 1750
Hpy188I TCNGA 5 cut(s) 533, 1171, 1470, 1486, 1609
Hpy188III TCNNGA 6 cut(s) 42, 176, 484, 793, 1429, 1901
Hpy8I GTNNAC 5 cut(s) 506, 1108, 1235, 1372, 1750
Hpy99I CGWCG 5 cut(s) 182, 305, 308, 1109, 1709
HpyAV CCTTC 5 cut(s) 307, 639, 1540, 1651, 1798
HpyCH4III ACNGT 4 cut(s) 317, 1105, 1822, 1959
HpyCH4IV ACGT 8 cut(s) 32, 303, 329, 911, 1011, 1237, 1578, 1853
HpyCH4V TGCA 4 cut(s) 163, 235, 1409, 1449
HpyF10VI GCNNNNNNNGC 6 cut(s) 109, 357, 681, 690, 1415, 1598
HpyF3I CTNAG 7 cut(s) 8, 127, 599, 671, 856, 1469, 1668
HpySE526I ACGT 8 cut(s) 32, 303, 329, 911, 1011, 1237, 1578, 1853
Hsp92I GRCGYC 1 cut(s) 303
Hsp92II CATG 3 cut(s) 62, 167, 572
HspAI GCGC 1 cut(s) 54
Kpn2I TCCGGA 1 cut(s) 41
Ksp22I TGATCA 1 cut(s) 1866
Kzo9I GATC 5 cut(s) 85, 157, 805, 1587, 1866
LmnI GCTCC 4 cut(s) 533, 1549, 1647, 1765
LweI GCATC 4 cut(s) 203, 317, 1396, 1856
MaeI CTAG 3 cut(s) 213, 665, 1773
MaeII ACGT 8 cut(s) 32, 303, 329, 911, 1011, 1237, 1578, 1853
MaeIII GTNAC 9 cut(s) 33, 330, 383, 571, 884, 1255, 1641, 1796, 1834
MalI GATC 5 cut(s) 87, 159, 807, 1589, 1868
MboI GATC 5 cut(s) 85, 157, 805, 1587, 1866
MboII GAAGA 7 cut(s) 1046, 1642, 1889, 1919, 1931, 1934, 1937
MflI RGATCY 2 cut(s) 85, 805
MhlI GDGCHC 2 cut(s) 1084, 1195
MluI ACGCGT 1 cut(s) 1315
MlyI GAGTC 3 cut(s) 854, 1072, 1660
MmeI TCCRAC 4 cut(s) 336, 511, 710, 1587
MroI TCCGGA 1 cut(s) 41
MseI TTAA 7 cut(s) 137, 492, 686, 719, 725, 1142, 1557
MslI CAYNNNNRTG 3 cut(s) 240, 655, 1581
MspA1I CMGCKG 1 cut(s) 103
MspI CCGG 6 cut(s) 42, 550, 952, 1060, 1626, 1693
MspR9I CCNGG 4 cut(s) 83, 952, 953, 1627
MvaI CCWGG 1 cut(s) 83
MvnI CGCG 3 cut(s) 1317, 1592, 1601
MwoI GCNNNNNNNGC 6 cut(s) 109, 357, 681, 690, 1415, 1598
NciI CCSGG 3 cut(s) 952, 953, 1627
NdeII GATC 5 cut(s) 85, 157, 805, 1587, 1866
NlaIII CATG 3 cut(s) 62, 167, 572
NlaIV GGNNCC 4 cut(s) 554, 662, 927, 1551
NmeAIII GCCGAG 1 cut(s) 1700
NmuCI GTSAC 2 cut(s) 571, 1796
NspI RCATGY 1 cut(s) 572
PaqCI CACCTGC 1 cut(s) 1670
PceI AGGCCT 1 cut(s) 1474
PciI ACATGT 1 cut(s) 568
PcsI WCGNNNNNNNCGW 2 cut(s) 1575, 1704
PfeI GAWTC 5 cut(s) 246, 696, 704, 778, 1814
PfoI TCCNGGA 1 cut(s) 1625
PkrI GCNGC 2 cut(s) 1726, 1729
PleI GAGTC 3 cut(s) 854, 1071, 1660
PmaCI CACGTG 1 cut(s) 1579
PmlI CACGTG 1 cut(s) 1579
PpsI GAGTC 3 cut(s) 854, 1071, 1660
Ppu21I YACGTR 3 cut(s) 912, 1238, 1579
PscI ACATGT 1 cut(s) 568
PsiI TTATAA 1 cut(s) 983
Psp124BI GAGCTC 1 cut(s) 1195
Psp1406I AACGTT 1 cut(s) 1011
Psp6I CCWGG 1 cut(s) 81
PspCI CACGTG 1 cut(s) 1579
PspGI CCWGG 1 cut(s) 81
PspN4I GGNNCC 4 cut(s) 554, 662, 927, 1551
PspPI GGNCC 3 cut(s) 110, 398, 925
PsuI RGATCY 2 cut(s) 85, 805
PvuII CAGCTG 1 cut(s) 103
RsaI GTAC 4 cut(s) 256, 1298, 1613, 1751
RsaNI GTAC 4 cut(s) 255, 1297, 1612, 1750
RseI CAYNNNNRTG 3 cut(s) 240, 655, 1581
SacI GAGCTC 1 cut(s) 1195
SalI GTCGAC 1 cut(s) 1106
SaqAI TTAA 7 cut(s) 137, 492, 686, 719, 725, 1142, 1557
SatI GCNGC 2 cut(s) 1725, 1728
Sau3AI GATC 5 cut(s) 85, 157, 805, 1587, 1866
Sau96I GGNCC 3 cut(s) 110, 398, 925
SchI GAGTC 3 cut(s) 854, 1072, 1660
ScrFI CCNGG 4 cut(s) 83, 952, 953, 1627
SduI GDGCHC 2 cut(s) 1084, 1195
SfaNI GCATC 4 cut(s) 203, 317, 1396, 1856
SfcI CTRYAG 1 cut(s) 375
SinI GGWCC 1 cut(s) 925
SmaI CCCGGG 1 cut(s) 953
SmiMI CAYNNNNRTG 3 cut(s) 240, 655, 1581
SmlI CTYRAG 2 cut(s) 353, 1806
SmoI CTYRAG 2 cut(s) 353, 1806
SnaBI TACGTA 2 cut(s) 912, 1238
SpeI ACTAGT 1 cut(s) 212
SseBI AGGCCT 1 cut(s) 1474
SsiI CCGC 5 cut(s) 923, 1592, 1601, 1724, 1727
SspI AATATT 2 cut(s) 1024, 1220
SspMI CTAG 3 cut(s) 213, 665, 1773
SstI GAGCTC 1 cut(s) 1195
StuI AGGCCT 1 cut(s) 1474
StyD4I CCNGG 4 cut(s) 81, 950, 951, 1625
TaaI ACNGT 4 cut(s) 317, 1105, 1822, 1959
TaiI ACGT 8 cut(s) 35, 306, 332, 914, 1014, 1240, 1581, 1856
TaqI TCGA 9 cut(s) 78, 177, 223, 300, 863, 1084, 1107, 1791, 1841
TatI WGTACW 2 cut(s) 1296, 1611
TauI GCSGC 2 cut(s) 1727, 1730
TfiI GAWTC 5 cut(s) 246, 696, 704, 778, 1814
Tru1I TTAA 7 cut(s) 137, 492, 686, 719, 725, 1142, 1557
Tru9I TTAA 7 cut(s) 137, 492, 686, 719, 725, 1142, 1557
TscAI CASTG 3 cut(s) 328, 622, 1825
TseFI GTSAC 2 cut(s) 571, 1796
Tsp45I GTSAC 2 cut(s) 571, 1796
TspDTI ATGAA 9 cut(s) 17, 38, 381, 403, 801, 963, 1047, 1896, 1920
TspGWI ACGGA 4 cut(s) 468, 483, 950, 1660
TspMI CCCGGG 1 cut(s) 951
TspRI CASTG 3 cut(s) 328, 622, 1825
VpaK11BI GGWCC 1 cut(s) 925
XceI RCATGY 1 cut(s) 572
XcmI CCANNNNNNNNNTGG 2 cut(s) 1074, 1825
XmaI CCCGGG 1 cut(s) 951
XmiI GTMKAC 2 cut(s) 505, 1107
XspI CTAG 3 cut(s) 213, 665, 1773
ZraI GACGTC 1 cut(s) 304
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.