SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HIRAN | PF08797 | 108 - 200 | 3.1e-12 | HIRAN domain |
| SNF2-rel_dom | PF00176 | 396 - 600 | 6.6e-35 | SNF2-related domain |
| zf-RING_UBOX | PF13445 | 656 - 688 | 7.9e-08 | RING-type zinc-finger |
| zf-C3HC4_2 | PF13923 | 656 - 683 | 1.7e-06 | Zinc finger, C3HC4 type (RING finger) |
| zf-C3HC4_4 | PF15227 | 656 - 688 | 5e-06 | zinc finger of C3HC4-type, RING |
| zf-C3HC4 | PF00097 | 656 - 696 | 6.3e-06 | Zinc finger, C3HC4 type (RING finger) |
| Helicase_C | PF00271 | 740 - 849 | 7.6e-14 | Helicase conserved C-terminal domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 253 |
| Acc36I | ACCTGC | 1 cut(s) | 253 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1717 |
| AccI | GTMKAC | 1 cut(s) | 764 |
| AccII | CGCG | 1 cut(s) | 1260 |
| AccIII | TCCGGA | 1 cut(s) | 199 |
| AciI | CCGC | 7 cut(s) | 100, 176, 344, 544, 627, 2404, 2511 |
| AclWI | GGATC | 6 cut(s) | 1333, 1511, 1988, 2304, 2486, 2499 |
| AcoI | YGGCCR | 2 cut(s) | 84, 2673 |
| AcsI | RAATTY | 7 cut(s) | 75, 277, 412, 517, 563, 923, 2235 |
| AcuI | CTGAAG | 6 cut(s) | 1314, 1674, 2225, 2377, 2466, 2600 |
| AcvI | CACGTG | 1 cut(s) | 16 |
| AdeI | CACNNNGTG | 1 cut(s) | 2012 |
| AfaI | GTAC | 3 cut(s) | 868, 1090, 2001 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1082, 1168, 1717 |
| AflII | CTTAAG | 1 cut(s) | 1406 |
| AflIII | ACRYGT | 4 cut(s) | 13, 15, 1026, 1918 |
| AhlI | ACTAGT | 1 cut(s) | 353 |
| AjnI | CCWGG | 3 cut(s) | 1278, 2103, 2166 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 423, 455, 1740, 1772 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 98, 130, 2024, 2056 |
| Alw21I | GWGCWC | 2 cut(s) | 116, 1305 |
| Alw26I | GTCTC | 3 cut(s) | 197, 262, 2050 |
| AlwI | GGATC | 6 cut(s) | 1333, 1511, 1988, 2304, 2486, 2499 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2252 |
| Aor13HI | TCCGGA | 1 cut(s) | 199 |
| AoxI | GGCC | 7 cut(s) | 84, 210, 887, 981, 1553, 2282, 2673 |
| ApeKI | GCWGC | 6 cut(s) | 259, 629, 827, 1346, 2468, 2629 |
| ApoI | RAATTY | 7 cut(s) | 75, 277, 412, 517, 563, 923, 2235 |
| AseI | ATTAAT | 2 cut(s) | 1490, 2094 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1028, 2235, 2390 |
| AspS9I | GGNCC | 2 cut(s) | 1159, 2686 |
| AsuC2I | CCSGG | 1 cut(s) | 118 |
| AsuHPI | GGTGA | 5 cut(s) | 62, 277, 670, 1204, 1526 |
| AvaII | GGWCC | 2 cut(s) | 1159, 2686 |
| BamHI | GGATCC | 1 cut(s) | 2491 |
| BanII | GRGCYC | 3 cut(s) | 57, 116, 124 |
| BauI | CACGAG | 1 cut(s) | 109 |
| BbrPI | CACGTG | 1 cut(s) | 16 |
| BbsI | GAAGAC | 4 cut(s) | 636, 795, 1428, 2190 |
| Bbv12I | GWGCWC | 2 cut(s) | 116, 1305 |
| BbvI | GCAGC | 6 cut(s) | 271, 616, 814, 1333, 2480, 2641 |
| BceAI | ACGGC | 2 cut(s) | 71, 99 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2447, 2481 |
| BciT130I | CCWGG | 3 cut(s) | 1280, 2105, 2168 |
| BclI | TGATCA | 1 cut(s) | 138 |
| BcnI | CCSGG | 1 cut(s) | 118 |
| BcoDI | GTCTC | 3 cut(s) | 197, 262, 2050 |
| BcuI | ACTAGT | 1 cut(s) | 353 |
| BfaI | CTAG | 3 cut(s) | 354, 1854, 2622 |
| BfmI | CTRYAG | 2 cut(s) | 828, 1429 |
| BfrI | CTTAAG | 1 cut(s) | 1406 |
| BfuAI | ACCTGC | 1 cut(s) | 253 |
| BglII | AGATCT | 1 cut(s) | 2307 |
| BisI | GCNGC | 6 cut(s) | 260, 630, 828, 1347, 2469, 2630 |
| BlsI | GCNGC | 6 cut(s) | 261, 631, 829, 1348, 2470, 2631 |
| BmcAI | AGTACT | 1 cut(s) | 868 |
| Bme1390I | CCNGG | 4 cut(s) | 118, 1280, 2105, 2168 |
| Bme18I | GGWCC | 2 cut(s) | 1159, 2686 |
| BmgT120I | GGNCC | 2 cut(s) | 1159, 2686 |
| BmiI | GGNNCC | 2 cut(s) | 1399, 2493 |
| BmrFI | CCNGG | 4 cut(s) | 118, 1280, 2105, 2168 |
| BmrI | ACTGGG | 1 cut(s) | 1480 |
| BmsI | GCATC | 7 cut(s) | 567, 823, 1300, 1488, 1666, 2274, 2480 |
| BmuI | ACTGGG | 1 cut(s) | 1480 |
| BpiI | GAAGAC | 4 cut(s) | 636, 795, 1428, 2190 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1350 |
| BpuEI | CTTGAG | 3 cut(s) | 857, 1077, 2065 |
| BpuMI | CCSGG | 1 cut(s) | 118 |
| Bsa29I | ATCGAT | 1 cut(s) | 2668 |
| BsaAI | YACGTR | 1 cut(s) | 16 |
| BsaBI | GATNNNNATC | 3 cut(s) | 666, 1944, 2352 |
| BsaI | GGTCTC | 1 cut(s) | 262 |
| BsaJI | CCNNGG | 8 cut(s) | 117, 538, 1188, 1460, 1756, 2077, 2495, 2514 |
| BsaWI | WCCGGW | 1 cut(s) | 199 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 98, 128, 891, 921, 1917, 1947, 2024, 2054 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1082, 1168, 1717 |
| Bse1I | ACTGG | 5 cut(s) | 252, 1292, 1475, 1711, 2192 |
| Bse3DI | GCAATG | 2 cut(s) | 816, 1375 |
| Bse8I | GATNNNNATC | 3 cut(s) | 666, 1944, 2352 |
| BseAI | TCCGGA | 1 cut(s) | 199 |
| BseBI | CCWGG | 3 cut(s) | 1280, 2105, 2168 |
| BseCI | ATCGAT | 1 cut(s) | 2668 |
| BseDI | CCNNGG | 8 cut(s) | 117, 538, 1188, 1460, 1756, 2077, 2495, 2514 |
| BseGI | GGATG | 5 cut(s) | 292, 733, 921, 967, 2127 |
| BseJI | GATNNNNATC | 3 cut(s) | 666, 1944, 2352 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1082, 1168, 1717 |
| BseMI | GCAATG | 2 cut(s) | 816, 1375 |
| BseMII | CTCAG | 3 cut(s) | 287, 875, 1047 |
| BseNI | ACTGG | 5 cut(s) | 252, 1292, 1475, 1711, 2192 |
| BseRI | GAGGAG | 2 cut(s) | 1095, 2531 |
| BseX3I | CGGCCG | 1 cut(s) | 84 |
| BseXI | GCAGC | 6 cut(s) | 271, 616, 814, 1333, 2480, 2641 |
| BseYI | CCCAGC | 2 cut(s) | 975, 2049 |
| BsgI | GTGCAG | 3 cut(s) | 278, 2047, 2487 |
| Bsh1236I | CGCG | 1 cut(s) | 1260 |
| Bsh1285I | CGRYCG | 2 cut(s) | 87, 2672 |
| BshFI | GGCC | 7 cut(s) | 86, 212, 889, 983, 1555, 2284, 2675 |
| BshVI | ATCGAT | 1 cut(s) | 2668 |
| BsiEI | CGRYCG | 2 cut(s) | 87, 2672 |
| BsiHKAI | GWGCWC | 2 cut(s) | 116, 1305 |
| BsiSI | CCGG | 3 cut(s) | 117, 200, 308 |
| BslFI | GGGAC | 2 cut(s) | 20, 1953 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1082, 1168, 1717 |
| BsmAI | GTCTC | 3 cut(s) | 197, 262, 2050 |
| BsmBI | CGTCTC | 1 cut(s) | 197 |
| BsmFI | GGGAC | 2 cut(s) | 20, 1953 |
| BsnI | GGCC | 7 cut(s) | 86, 212, 889, 983, 1555, 2284, 2675 |
| Bso31I | GGTCTC | 1 cut(s) | 262 |
| Bsp1286I | GDGCHC | 4 cut(s) | 57, 116, 124, 1305 |
| Bsp13I | TCCGGA | 1 cut(s) | 199 |
| Bsp19I | CCATGG | 2 cut(s) | 1460, 2495 |
| Bsp68I | TCGCGA | 1 cut(s) | 1260 |
| BspACI | CCGC | 7 cut(s) | 100, 176, 344, 544, 627, 2404, 2511 |
| BspANI | GGCC | 7 cut(s) | 86, 212, 889, 983, 1555, 2284, 2675 |
| BspCNI | CTCAG | 3 cut(s) | 286, 876, 1046 |
| BspDI | ATCGAT | 1 cut(s) | 2668 |
| BspEI | TCCGGA | 1 cut(s) | 199 |
| BspFNI | CGCG | 1 cut(s) | 1260 |
| BspHI | TCATGA | 1 cut(s) | 1876 |
| BspLI | GGNNCC | 2 cut(s) | 1399, 2493 |
| BspMAI | CTGCAG | 1 cut(s) | 832 |
| BspMI | ACCTGC | 1 cut(s) | 253 |
| BspPI | GGATC | 6 cut(s) | 1333, 1511, 1988, 2304, 2486, 2499 |
| BspTI | CTTAAG | 1 cut(s) | 1406 |
| BspTNI | GGTCTC | 1 cut(s) | 262 |
| BsrDI | GCAATG | 2 cut(s) | 816, 1375 |
| BsrI | ACTGG | 5 cut(s) | 252, 1292, 1475, 1711, 2192 |
| BssECI | CCNNGG | 8 cut(s) | 117, 538, 1188, 1460, 1756, 2077, 2495, 2514 |
| BssNAI | GTATAC | 1 cut(s) | 765 |
| BssSI | CACGAG | 1 cut(s) | 109 |
| BssT1I | CCWWGG | 5 cut(s) | 538, 1460, 1756, 2077, 2495 |
| Bst1107I | GTATAC | 1 cut(s) | 765 |
| Bst2BI | CACGAG | 1 cut(s) | 109 |
| Bst2UI | CCWGG | 3 cut(s) | 1280, 2105, 2168 |
| Bst4CI | ACNGT | 8 cut(s) | 94, 242, 762, 1268, 1963, 2162, 2563, 2593 |
| Bst6I | CTCTTC | 2 cut(s) | 969, 2312 |
| BstAFI | CTTAAG | 1 cut(s) | 1406 |
| BstBAI | YACGTR | 1 cut(s) | 16 |
| BstC8I | GCNNGC | 4 cut(s) | 124, 1477, 1851, 2606 |
| BstDEI | CTNAG | 5 cut(s) | 273, 884, 1033, 1350, 2202 |
| BstDSI | CCRYGG | 3 cut(s) | 1188, 1460, 2495 |
| BstF5I | GGATG | 5 cut(s) | 292, 733, 921, 967, 2127 |
| BstFNI | CGCG | 1 cut(s) | 1260 |
| BstMAI | GTCTC | 3 cut(s) | 197, 262, 2050 |
| BstMCI | CGRYCG | 2 cut(s) | 87, 2672 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 827, 833, 1343, 1355, 1456, 1983, 2403 |
| BstNI | CCWGG | 3 cut(s) | 1280, 2105, 2168 |
| BstNSI | RCATGY | 5 cut(s) | 1030, 1454, 1479, 1922, 2608 |
| BstSCI | CCNGG | 4 cut(s) | 116, 1278, 2103, 2166 |
| BstSFI | CTRYAG | 2 cut(s) | 828, 1429 |
| BstUI | CGCG | 1 cut(s) | 1260 |
| BstV1I | GCAGC | 6 cut(s) | 271, 616, 814, 1333, 2480, 2641 |
| BstV2I | GAAGAC | 4 cut(s) | 636, 795, 1428, 2190 |
| BstX2I | RGATCY | 4 cut(s) | 1325, 2296, 2307, 2491 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 489, 1952 |
| BstYI | RGATCY | 4 cut(s) | 1325, 2296, 2307, 2491 |
| BstZ17I | GTATAC | 1 cut(s) | 765 |
| BstZI | CGGCCG | 1 cut(s) | 84 |
| Bsu15I | ATCGAT | 1 cut(s) | 2668 |
| BsuRI | GGCC | 7 cut(s) | 86, 212, 889, 983, 1555, 2284, 2675 |
| BsuTUI | ATCGAT | 1 cut(s) | 2668 |
| BtgI | CCRYGG | 3 cut(s) | 1188, 1460, 2495 |
| BtsCI | GGATG | 5 cut(s) | 292, 733, 921, 967, 2127 |
| BtsI | GCAGTG | 1 cut(s) | 1787 |
| BtsIMutI | CAGTG | 6 cut(s) | 261, 1273, 1787, 1968, 2285, 2598 |
| BtuMI | TCGCGA | 1 cut(s) | 1260 |
| BveI | ACCTGC | 1 cut(s) | 253 |
| Cac8I | GCNNGC | 4 cut(s) | 124, 1477, 1851, 2606 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2252 |
| CciI | TCATGA | 1 cut(s) | 1876 |
| Cfr13I | GGNCC | 2 cut(s) | 1159, 2686 |
| ClaI | ATCGAT | 1 cut(s) | 2668 |
| CsiI | ACCWGGT | 1 cut(s) | 1278 |
| Csp6I | GTAC | 3 cut(s) | 867, 1089, 2000 |
| CviQI | GTAC | 3 cut(s) | 867, 1089, 2000 |
| DdeI | CTNAG | 5 cut(s) | 273, 884, 1033, 1350, 2202 |
| DraIII | CACNNNGTG | 1 cut(s) | 2012 |
| EaeI | YGGCCR | 2 cut(s) | 84, 2673 |
| EagI | CGGCCG | 1 cut(s) | 84 |
| Eam1104I | CTCTTC | 2 cut(s) | 969, 2312 |
| EarI | CTCTTC | 2 cut(s) | 969, 2312 |
| Ecl136II | GAGCTC | 1 cut(s) | 114 |
| EclXI | CGGCCG | 1 cut(s) | 84 |
| Eco130I | CCWWGG | 5 cut(s) | 538, 1460, 1756, 2077, 2495 |
| Eco147I | AGGCCT | 1 cut(s) | 983 |
| Eco24I | GRGCYC | 3 cut(s) | 57, 116, 124 |
| Eco31I | GGTCTC | 1 cut(s) | 262 |
| Eco32I | GATATC | 1 cut(s) | 1942 |
| Eco47I | GGWCC | 2 cut(s) | 1159, 2686 |
| Eco52I | CGGCCG | 1 cut(s) | 84 |
| Eco53kI | GAGCTC | 1 cut(s) | 114 |
| Eco57I | CTGAAG | 6 cut(s) | 1314, 1674, 2225, 2377, 2466, 2600 |
| Eco72I | CACGTG | 1 cut(s) | 16 |
| EcoICRI | GAGCTC | 1 cut(s) | 114 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2686 |
| EcoRI | GAATTC | 1 cut(s) | 517 |
| EcoRII | CCWGG | 3 cut(s) | 1278, 2103, 2166 |
| EcoRV | GATATC | 1 cut(s) | 1942 |
| EcoT14I | CCWWGG | 5 cut(s) | 538, 1460, 1756, 2077, 2495 |
| EcoT38I | GRGCYC | 3 cut(s) | 57, 116, 124 |
| ErhI | CCWWGG | 5 cut(s) | 538, 1460, 1756, 2077, 2495 |
| Esp3I | CGTCTC | 1 cut(s) | 197 |
| FaqI | GGGAC | 2 cut(s) | 20, 1953 |
| FauI | CCCGC | 1 cut(s) | 2518 |
| FauNDI | CATATG | 2 cut(s) | 1973, 1990 |
| FbaI | TGATCA | 1 cut(s) | 138 |
| FblI | GTMKAC | 1 cut(s) | 764 |
| Fnu4HI | GCNGC | 6 cut(s) | 260, 630, 828, 1347, 2469, 2630 |
| FokI | GGATG | 5 cut(s) | 299, 740, 928, 954, 2134 |
| FriOI | GRGCYC | 3 cut(s) | 57, 116, 124 |
| Fsp4HI | GCNGC | 6 cut(s) | 260, 630, 828, 1347, 2469, 2630 |
| FspBI | CTAG | 3 cut(s) | 354, 1854, 2622 |
| GluI | GCNGC | 6 cut(s) | 260, 630, 828, 1347, 2469, 2630 |
| GsaI | CCCAGC | 2 cut(s) | 979, 2053 |
| HaeIII | GGCC | 7 cut(s) | 86, 212, 889, 983, 1555, 2284, 2675 |
| HapII | CCGG | 3 cut(s) | 117, 200, 308 |
| HincII | GTYRAC | 2 cut(s) | 1285, 1392 |
| HindII | GTYRAC | 2 cut(s) | 1285, 1392 |
| HpaII | CCGG | 3 cut(s) | 117, 200, 308 |
| HphI | GGTGA | 5 cut(s) | 62, 277, 670, 1204, 1526 |
| Hpy166II | GTNNAC | 6 cut(s) | 245, 765, 1024, 1285, 1392, 2015 |
| Hpy8I | GTNNAC | 6 cut(s) | 245, 765, 1024, 1285, 1392, 2015 |
| Hpy99I | CGWCG | 1 cut(s) | 85 |
| HpyCH4III | ACNGT | 8 cut(s) | 94, 242, 762, 1268, 1963, 2162, 2563, 2593 |
| HpyCH4IV | ACGT | 3 cut(s) | 15, 1087, 1626 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 827, 833, 1343, 1355, 1456, 1983, 2403 |
| HpyF3I | CTNAG | 5 cut(s) | 273, 884, 1033, 1350, 2202 |
| HpySE526I | ACGT | 3 cut(s) | 15, 1087, 1626 |
| Kpn2I | TCCGGA | 1 cut(s) | 199 |
| Ksp22I | TGATCA | 1 cut(s) | 138 |
| LmnI | GCTCC | 2 cut(s) | 119, 1464 |
| Lsp1109I | GCAGC | 6 cut(s) | 271, 616, 814, 1333, 2480, 2641 |
| LweI | GCATC | 7 cut(s) | 567, 823, 1300, 1488, 1666, 2274, 2480 |
| MabI | ACCWGGT | 1 cut(s) | 1278 |
| MaeI | CTAG | 3 cut(s) | 354, 1854, 2622 |
| MaeII | ACGT | 3 cut(s) | 15, 1087, 1626 |
| MaeIII | GTNAC | 3 cut(s) | 88, 839, 2453 |
| MflI | RGATCY | 4 cut(s) | 1325, 2296, 2307, 2491 |
| MhlI | GDGCHC | 4 cut(s) | 57, 116, 124, 1305 |
| MlyI | GAGTC | 5 cut(s) | 127, 809, 1145, 1819, 2204 |
| MmeI | TCCRAC | 6 cut(s) | 104, 354, 727, 1933, 2152, 2340 |
| MroI | TCCGGA | 1 cut(s) | 199 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1028, 2235, 2390 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1019, 1110, 1743 |
| MspA1I | CMGCKG | 1 cut(s) | 629 |
| MspCI | CTTAAG | 1 cut(s) | 1406 |
| MspI | CCGG | 3 cut(s) | 117, 200, 308 |
| MspR9I | CCNGG | 4 cut(s) | 118, 1280, 2105, 2168 |
| MvaI | CCWGG | 3 cut(s) | 1280, 2105, 2168 |
| MvnI | CGCG | 1 cut(s) | 1260 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 827, 833, 1343, 1355, 1456, 1983, 2403 |
| NciI | CCSGG | 1 cut(s) | 118 |
| NcoI | CCATGG | 2 cut(s) | 1460, 2495 |
| NdeI | CATATG | 2 cut(s) | 1973, 1990 |
| NlaIV | GGNNCC | 2 cut(s) | 1399, 2493 |
| NmeAIII | GCCGAG | 1 cut(s) | 2539 |
| NmuCI | GTSAC | 1 cut(s) | 88 |
| NruI | TCGCGA | 1 cut(s) | 1260 |
| NspI | RCATGY | 5 cut(s) | 1030, 1454, 1479, 1922, 2608 |
| PaeI | GCATGC | 2 cut(s) | 1479, 2608 |
| PagI | TCATGA | 1 cut(s) | 1876 |
| PaqCI | CACCTGC | 1 cut(s) | 253 |
| PceI | AGGCCT | 1 cut(s) | 983 |
| PciI | ACATGT | 2 cut(s) | 1026, 1918 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1028, 2235, 2390 |
| PfeI | GAWTC | 7 cut(s) | 196, 662, 1820, 1860, 1880, 1900, 2503 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1717 |
| PkrI | GCNGC | 6 cut(s) | 261, 631, 829, 1348, 2470, 2631 |
| Ple19I | CGATCG | 1 cut(s) | 2672 |
| PleI | GAGTC | 5 cut(s) | 127, 808, 1144, 1818, 2203 |
| PmaCI | CACGTG | 1 cut(s) | 16 |
| PmlI | CACGTG | 1 cut(s) | 16 |
| PpsI | GAGTC | 5 cut(s) | 127, 808, 1144, 1818, 2203 |
| Ppu21I | YACGTR | 1 cut(s) | 16 |
| PpuMI | RGGWCCY | 1 cut(s) | 2686 |
| PscI | ACATGT | 2 cut(s) | 1026, 1918 |
| PshBI | ATTAAT | 2 cut(s) | 1490, 2094 |
| Psp124BI | GAGCTC | 1 cut(s) | 116 |
| Psp5II | RGGWCCY | 1 cut(s) | 2686 |
| Psp6I | CCWGG | 3 cut(s) | 1278, 2103, 2166 |
| PspCI | CACGTG | 1 cut(s) | 16 |
| PspFI | CCCAGC | 2 cut(s) | 975, 2049 |
| PspGI | CCWGG | 3 cut(s) | 1278, 2103, 2166 |
| PspN4I | GGNNCC | 2 cut(s) | 1399, 2493 |
| PspPI | GGNCC | 2 cut(s) | 1159, 2686 |
| PspPPI | RGGWCCY | 1 cut(s) | 2686 |
| PstI | CTGCAG | 1 cut(s) | 832 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2252 |
| PsuI | RGATCY | 4 cut(s) | 1325, 2296, 2307, 2491 |
| PvuI | CGATCG | 1 cut(s) | 2672 |
| RruI | TCGCGA | 1 cut(s) | 1260 |
| RsaI | GTAC | 3 cut(s) | 868, 1090, 2001 |
| RsaNI | GTAC | 3 cut(s) | 867, 1089, 2000 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1019, 1110, 1743 |
| SacI | GAGCTC | 1 cut(s) | 116 |
| SatI | GCNGC | 6 cut(s) | 260, 630, 828, 1347, 2469, 2630 |
| Sau96I | GGNCC | 2 cut(s) | 1159, 2686 |
| ScaI | AGTACT | 1 cut(s) | 868 |
| SchI | GAGTC | 5 cut(s) | 127, 809, 1145, 1819, 2204 |
| ScrFI | CCNGG | 4 cut(s) | 118, 1280, 2105, 2168 |
| SduI | GDGCHC | 4 cut(s) | 57, 116, 124, 1305 |
| SexAI | ACCWGGT | 1 cut(s) | 1278 |
| SfaNI | GCATC | 7 cut(s) | 567, 823, 1300, 1488, 1666, 2274, 2480 |
| SfcI | CTRYAG | 2 cut(s) | 828, 1429 |
| SinI | GGWCC | 2 cut(s) | 1159, 2686 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1019, 1110, 1743 |
| SmlI | CTYRAG | 4 cut(s) | 872, 1092, 1406, 2044 |
| SmoI | CTYRAG | 4 cut(s) | 872, 1092, 1406, 2044 |
| SpeI | ACTAGT | 1 cut(s) | 353 |
| SphI | GCATGC | 2 cut(s) | 1479, 2608 |
| SseBI | AGGCCT | 1 cut(s) | 983 |
| SsiI | CCGC | 7 cut(s) | 100, 176, 344, 544, 627, 2404, 2511 |
| SspMI | CTAG | 3 cut(s) | 354, 1854, 2622 |
| SstI | GAGCTC | 1 cut(s) | 116 |
| StuI | AGGCCT | 1 cut(s) | 983 |
| StyD4I | CCNGG | 4 cut(s) | 116, 1278, 2103, 2166 |
| StyI | CCWWGG | 5 cut(s) | 538, 1460, 1756, 2077, 2495 |
| TaaI | ACNGT | 8 cut(s) | 94, 242, 762, 1268, 1963, 2162, 2563, 2593 |
| TaiI | ACGT | 3 cut(s) | 18, 1090, 1629 |
| TaqI | TCGA | 9 cut(s) | 131, 184, 350, 449, 945, 1305, 1808, 2557, 2668 |
| TatI | WGTACW | 2 cut(s) | 866, 1999 |
| TfiI | GAWTC | 7 cut(s) | 196, 662, 1820, 1860, 1880, 1900, 2503 |
| TscAI | CASTG | 6 cut(s) | 261, 1273, 1787, 1968, 2285, 2598 |
| TseFI | GTSAC | 1 cut(s) | 88 |
| TseI | GCWGC | 6 cut(s) | 259, 629, 827, 1346, 2468, 2629 |
| Tsp45I | GTSAC | 1 cut(s) | 88 |
| TspRI | CASTG | 6 cut(s) | 261, 1273, 1787, 1968, 2285, 2598 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1717 |
| Vha464I | CTTAAG | 1 cut(s) | 1406 |
| VpaK11BI | GGWCC | 2 cut(s) | 1159, 2686 |
| VspI | ATTAAT | 2 cut(s) | 1490, 2094 |
| XapI | RAATTY | 7 cut(s) | 75, 277, 412, 517, 563, 923, 2235 |
| XbaI | TCTAGA | 1 cut(s) | 2621 |
| XceI | RCATGY | 5 cut(s) | 1030, 1454, 1479, 1922, 2608 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1186, 1467 |
| XmiI | GTMKAC | 1 cut(s) | 764 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1028, 2235, 2390 |
| XspI | CTAG | 3 cut(s) | 354, 1854, 2622 |
| ZrmI | AGTACT | 1 cut(s) | 868 |