SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2332 |
| AccI | GTMKAC | 2 cut(s) | 362, 2953 |
| AciI | CCGC | 3 cut(s) | 100, 176, 2806 |
| AclWI | GGATC | 8 cut(s) | 904, 1430, 1649, 1948, 2126, 2706, 2891, 2904 |
| AcoI | YGGCCR | 2 cut(s) | 84, 3078 |
| AcsI | RAATTY | 4 cut(s) | 75, 521, 1542, 2637 |
| AcuI | CTGAAG | 6 cut(s) | 885, 2289, 2627, 2779, 2868, 3005 |
| AcvI | CACGTG | 1 cut(s) | 16 |
| AcyI | GRCGYC | 1 cut(s) | 2114 |
| AfaI | GTAC | 3 cut(s) | 466, 1336, 1630 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 680, 739, 1538, 1613, 1688, 2332 |
| AflII | CTTAAG | 2 cut(s) | 977, 2021 |
| AflIII | ACRYGT | 5 cut(s) | 13, 624, 1086, 1494, 2534 |
| AjnI | CCWGG | 2 cut(s) | 849, 1893 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 703, 735, 2355, 2387 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 98, 130 |
| Alw21I | GWGCWC | 4 cut(s) | 116, 876, 1920, 1966 |
| Alw26I | GTCTC | 2 cut(s) | 2716, 2765 |
| AlwI | GGATC | 8 cut(s) | 904, 1430, 1649, 1948, 2126, 2706, 2891, 2904 |
| AoxI | GGCC | 8 cut(s) | 54, 84, 485, 579, 1355, 1449, 2168, 3078 |
| ApeKI | GCWGC | 4 cut(s) | 425, 1517, 2873, 3034 |
| ApoI | RAATTY | 4 cut(s) | 75, 521, 1542, 2637 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2677, 2709 |
| AseI | ATTAAT | 1 cut(s) | 2105 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 626, 2487, 2637 |
| AspLEI | GCGC | 2 cut(s) | 691, 1735 |
| AspS9I | GGNCC | 3 cut(s) | 730, 2651, 3091 |
| AsuC2I | CCSGG | 2 cut(s) | 118, 2087 |
| AsuHPI | GGTGA | 5 cut(s) | 62, 268, 1138, 1819, 2141 |
| AsuII | TTCGAA | 1 cut(s) | 2612 |
| AvaII | GGWCC | 3 cut(s) | 730, 2651, 3091 |
| AxyI | CCTNAGG | 1 cut(s) | 921 |
| BaeGI | GKGCMC | 1 cut(s) | 2996 |
| BamHI | GGATCC | 1 cut(s) | 2896 |
| BanII | GRGCYC | 2 cut(s) | 116, 124 |
| BauI | CACGAG | 1 cut(s) | 109 |
| BbrPI | CACGTG | 1 cut(s) | 16 |
| BbsI | GAAGAC | 6 cut(s) | 234, 393, 999, 1083, 1577, 2592 |
| Bbv12I | GWGCWC | 4 cut(s) | 116, 876, 1920, 1966 |
| BbvI | GCAGC | 4 cut(s) | 412, 1504, 2885, 3046 |
| BceAI | ACGGC | 2 cut(s) | 71, 99 |
| BciT130I | CCWGG | 2 cut(s) | 851, 1895 |
| BclI | TGATCA | 1 cut(s) | 138 |
| BcnI | CCSGG | 2 cut(s) | 118, 2087 |
| BcoDI | GTCTC | 2 cut(s) | 2716, 2765 |
| BfaI | CTAG | 3 cut(s) | 1103, 1547, 3027 |
| BfmI | CTRYAG | 3 cut(s) | 426, 1000, 2044 |
| BfrI | CTTAAG | 2 cut(s) | 977, 2021 |
| BisI | GCNGC | 4 cut(s) | 426, 1518, 2874, 3035 |
| BlsI | GCNGC | 4 cut(s) | 427, 1519, 2875, 3036 |
| BmcAI | AGTACT | 2 cut(s) | 466, 1336 |
| Bme1390I | CCNGG | 4 cut(s) | 118, 851, 1895, 2087 |
| Bme18I | GGWCC | 3 cut(s) | 730, 2651, 3091 |
| BmgT120I | GGNCC | 3 cut(s) | 730, 2651, 3091 |
| BmiI | GGNNCC | 2 cut(s) | 2014, 2898 |
| BmrFI | CCNGG | 4 cut(s) | 118, 851, 1895, 2087 |
| BmrI | ACTGGG | 3 cut(s) | 1051, 1574, 2405 |
| BmsI | GCATC | 8 cut(s) | 421, 676, 1291, 1543, 2049, 2281, 2676, 2885 |
| BmuI | ACTGGG | 3 cut(s) | 1051, 1574, 2405 |
| BpiI | GAAGAC | 6 cut(s) | 234, 393, 999, 1083, 1577, 2592 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1965 |
| Bpu14I | TTCGAA | 1 cut(s) | 2612 |
| BpuEI | CTTGAG | 3 cut(s) | 455, 1325, 2552 |
| BpuMI | CCSGG | 2 cut(s) | 118, 2087 |
| Bsa29I | ATCGAT | 1 cut(s) | 3073 |
| BsaAI | YACGTR | 3 cut(s) | 16, 825, 1869 |
| BsaBI | GATNNNNATC | 2 cut(s) | 264, 2754 |
| BsaHI | GRCGYC | 1 cut(s) | 2114 |
| BsaI | GGTCTC | 1 cut(s) | 2716 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 98, 128, 489, 519, 1359, 1389 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 680, 739, 1538, 1613, 1688, 2332 |
| Bse1I | ACTGG | 7 cut(s) | 863, 1046, 1569, 1907, 2326, 2411, 2594 |
| Bse21I | CCTNAGG | 1 cut(s) | 921 |
| Bse3DI | GCAATG | 4 cut(s) | 414, 946, 1563, 1990 |
| Bse8I | GATNNNNATC | 2 cut(s) | 264, 2754 |
| BseBI | CCWGG | 2 cut(s) | 851, 1895 |
| BseCI | ATCGAT | 1 cut(s) | 3073 |
| BseGI | GGATG | 9 cut(s) | 331, 519, 565, 1027, 1201, 1389, 1791, 2524, 2959 |
| BseJI | GATNNNNATC | 2 cut(s) | 264, 2754 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 680, 739, 1538, 1613, 1688, 2332 |
| BseMI | GCAATG | 4 cut(s) | 414, 946, 1563, 1990 |
| BseMII | CTCAG | 4 cut(s) | 473, 645, 1343, 1979 |
| BseNI | ACTGG | 7 cut(s) | 863, 1046, 1569, 1907, 2326, 2411, 2594 |
| BseRI | GAGGAG | 5 cut(s) | 693, 696, 1261, 1551, 2936 |
| BseSI | GKGCMC | 1 cut(s) | 2996 |
| BseX3I | CGGCCG | 1 cut(s) | 84 |
| BseXI | GCAGC | 4 cut(s) | 412, 1504, 2885, 3046 |
| BseYI | CCCAGC | 2 cut(s) | 573, 1443 |
| BsgI | GTGCAG | 2 cut(s) | 2570, 2892 |
| Bsh1285I | CGRYCG | 2 cut(s) | 87, 3077 |
| BshFI | GGCC | 8 cut(s) | 56, 86, 487, 581, 1357, 1451, 2170, 3080 |
| BshVI | ATCGAT | 1 cut(s) | 3073 |
| BsiEI | CGRYCG | 2 cut(s) | 87, 3077 |
| BsiHKAI | GWGCWC | 4 cut(s) | 116, 876, 1920, 1966 |
| BsiSI | CCGG | 2 cut(s) | 117, 2086 |
| BslFI | GGGAC | 2 cut(s) | 20, 1575 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 680, 739, 1538, 1613, 1688, 2332 |
| BsmAI | GTCTC | 2 cut(s) | 2716, 2765 |
| BsmBI | CGTCTC | 1 cut(s) | 2765 |
| BsmFI | GGGAC | 2 cut(s) | 20, 1575 |
| BsnI | GGCC | 8 cut(s) | 56, 86, 487, 581, 1357, 1451, 2170, 3080 |
| Bso31I | GGTCTC | 1 cut(s) | 2716 |
| Bsp119I | TTCGAA | 1 cut(s) | 2612 |
| Bsp1286I | GDGCHC | 6 cut(s) | 116, 124, 876, 1920, 1966, 2996 |
| Bsp19I | CCATGG | 3 cut(s) | 1031, 2075, 2900 |
| BspACI | CCGC | 3 cut(s) | 100, 176, 2806 |
| BspANI | GGCC | 8 cut(s) | 56, 86, 487, 581, 1357, 1451, 2170, 3080 |
| BspCNI | CTCAG | 4 cut(s) | 474, 644, 1344, 1978 |
| BspDI | ATCGAT | 1 cut(s) | 3073 |
| BspHI | TCATGA | 3 cut(s) | 2491, 2656, 2860 |
| BspLI | GGNNCC | 2 cut(s) | 2014, 2898 |
| BspMAI | CTGCAG | 1 cut(s) | 430 |
| BspPI | GGATC | 8 cut(s) | 904, 1430, 1649, 1948, 2126, 2706, 2891, 2904 |
| BspT104I | TTCGAA | 1 cut(s) | 2612 |
| BspTI | CTTAAG | 2 cut(s) | 977, 2021 |
| BspTNI | GGTCTC | 1 cut(s) | 2716 |
| BsrDI | GCAATG | 4 cut(s) | 414, 946, 1563, 1990 |
| BsrI | ACTGG | 7 cut(s) | 863, 1046, 1569, 1907, 2326, 2411, 2594 |
| BssNAI | GTATAC | 1 cut(s) | 363 |
| BssNI | GRCGYC | 1 cut(s) | 2114 |
| BssSI | CACGAG | 1 cut(s) | 109 |
| BssT1I | CCWWGG | 6 cut(s) | 1031, 1607, 1682, 2075, 2371, 2900 |
| Bst1107I | GTATAC | 1 cut(s) | 363 |
| Bst2BI | CACGAG | 1 cut(s) | 109 |
| Bst2UI | CCWGG | 2 cut(s) | 851, 1895 |
| Bst4CI | ACNGT | 5 cut(s) | 94, 839, 1883, 2968, 2998 |
| Bst6I | CTCTTC | 4 cut(s) | 567, 1146, 1392, 2714 |
| BstACI | GRCGYC | 1 cut(s) | 2114 |
| BstAFI | CTTAAG | 2 cut(s) | 977, 2021 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1517 |
| BstBAI | YACGTR | 3 cut(s) | 16, 825, 1869 |
| BstBI | TTCGAA | 1 cut(s) | 2612 |
| BstC8I | GCNNGC | 5 cut(s) | 124, 356, 2092, 2466, 3011 |
| BstDEI | CTNAG | 8 cut(s) | 482, 631, 921, 1352, 1965, 2053, 2604, 2741 |
| BstDSI | CCRYGG | 5 cut(s) | 759, 1031, 1803, 2075, 2900 |
| BstF5I | GGATG | 9 cut(s) | 331, 519, 565, 1027, 1201, 1389, 1791, 2524, 2959 |
| BstHHI | GCGC | 2 cut(s) | 691, 1735 |
| BstMAI | GTCTC | 2 cut(s) | 2716, 2765 |
| BstMCI | CGRYCG | 2 cut(s) | 87, 3077 |
| BstNI | CCWGG | 2 cut(s) | 851, 1895 |
| BstNSI | RCATGY | 9 cut(s) | 628, 1050, 1090, 1308, 1498, 2069, 2094, 2538, 3013 |
| BstSCI | CCNGG | 4 cut(s) | 116, 849, 1893, 2085 |
| BstSFI | CTRYAG | 3 cut(s) | 426, 1000, 2044 |
| BstSLI | GKGCMC | 1 cut(s) | 2996 |
| BstSNI | TACGTA | 2 cut(s) | 825, 1869 |
| BstV1I | GCAGC | 4 cut(s) | 412, 1504, 2885, 3046 |
| BstV2I | GAAGAC | 6 cut(s) | 234, 393, 999, 1083, 1577, 2592 |
| BstX2I | RGATCY | 5 cut(s) | 896, 1654, 1940, 2698, 2896 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 827 |
| BstYI | RGATCY | 5 cut(s) | 896, 1654, 1940, 2698, 2896 |
| BstZ17I | GTATAC | 1 cut(s) | 363 |
| BstZI | CGGCCG | 1 cut(s) | 84 |
| Bsu15I | ATCGAT | 1 cut(s) | 3073 |
| Bsu36I | CCTNAGG | 1 cut(s) | 921 |
| BsuRI | GGCC | 8 cut(s) | 56, 86, 487, 581, 1357, 1451, 2170, 3080 |
| BsuTUI | ATCGAT | 1 cut(s) | 3073 |
| BtgI | CCRYGG | 5 cut(s) | 759, 1031, 1803, 2075, 2900 |
| BtsCI | GGATG | 9 cut(s) | 331, 519, 565, 1027, 1201, 1389, 1791, 2524, 2959 |
| BtsI | GCAGTG | 3 cut(s) | 1074, 1284, 2402 |
| BtsIMutI | CAGTG | 7 cut(s) | 844, 1074, 1284, 1888, 2402, 2687, 3003 |
| Cac8I | GCNNGC | 5 cut(s) | 124, 356, 2092, 2466, 3011 |
| CciI | TCATGA | 3 cut(s) | 2491, 2656, 2860 |
| CfoI | GCGC | 2 cut(s) | 691, 1735 |
| Cfr13I | GGNCC | 3 cut(s) | 730, 2651, 3091 |
| ClaI | ATCGAT | 1 cut(s) | 3073 |
| CseI | GACGC | 1 cut(s) | 2122 |
| CsiI | ACCWGGT | 2 cut(s) | 849, 1893 |
| Csp6I | GTAC | 3 cut(s) | 465, 1335, 1629 |
| CviQI | GTAC | 3 cut(s) | 465, 1335, 1629 |
| DdeI | CTNAG | 8 cut(s) | 482, 631, 921, 1352, 1965, 2053, 2604, 2741 |
| EaeI | YGGCCR | 2 cut(s) | 84, 3078 |
| EagI | CGGCCG | 1 cut(s) | 84 |
| Eam1104I | CTCTTC | 4 cut(s) | 567, 1146, 1392, 2714 |
| EarI | CTCTTC | 4 cut(s) | 567, 1146, 1392, 2714 |
| Ecl136II | GAGCTC | 1 cut(s) | 114 |
| EclXI | CGGCCG | 1 cut(s) | 84 |
| Eco105I | TACGTA | 2 cut(s) | 825, 1869 |
| Eco130I | CCWWGG | 6 cut(s) | 1031, 1607, 1682, 2075, 2371, 2900 |
| Eco147I | AGGCCT | 2 cut(s) | 581, 1451 |
| Eco24I | GRGCYC | 2 cut(s) | 116, 124 |
| Eco31I | GGTCTC | 1 cut(s) | 2716 |
| Eco47I | GGWCC | 3 cut(s) | 730, 2651, 3091 |
| Eco52I | CGGCCG | 1 cut(s) | 84 |
| Eco53kI | GAGCTC | 1 cut(s) | 114 |
| Eco57I | CTGAAG | 6 cut(s) | 885, 2289, 2627, 2779, 2868, 3005 |
| Eco72I | CACGTG | 1 cut(s) | 16 |
| Eco81I | CCTNAGG | 1 cut(s) | 921 |
| EcoICRI | GAGCTC | 1 cut(s) | 114 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2651, 3091 |
| EcoRI | GAATTC | 1 cut(s) | 1542 |
| EcoRII | CCWGG | 2 cut(s) | 849, 1893 |
| EcoT14I | CCWWGG | 6 cut(s) | 1031, 1607, 1682, 2075, 2371, 2900 |
| EcoT22I | ATGCAT | 1 cut(s) | 1306 |
| EcoT38I | GRGCYC | 2 cut(s) | 116, 124 |
| ErhI | CCWWGG | 6 cut(s) | 1031, 1607, 1682, 2075, 2371, 2900 |
| Esp3I | CGTCTC | 1 cut(s) | 2765 |
| FaqI | GGGAC | 2 cut(s) | 20, 1575 |
| FbaI | TGATCA | 1 cut(s) | 138 |
| FblI | GTMKAC | 2 cut(s) | 362, 2953 |
| Fnu4HI | GCNGC | 4 cut(s) | 426, 1518, 2874, 3035 |
| FokI | GGATG | 9 cut(s) | 338, 526, 552, 1034, 1208, 1396, 1798, 2511, 2946 |
| FriOI | GRGCYC | 2 cut(s) | 116, 124 |
| Fsp4HI | GCNGC | 4 cut(s) | 426, 1518, 2874, 3035 |
| FspBI | CTAG | 3 cut(s) | 1103, 1547, 3027 |
| GlaI | GCGC | 2 cut(s) | 690, 1734 |
| GluI | GCNGC | 4 cut(s) | 426, 1518, 2874, 3035 |
| GsaI | CCCAGC | 2 cut(s) | 577, 1447 |
| HaeIII | GGCC | 8 cut(s) | 56, 86, 487, 581, 1357, 1451, 2170, 3080 |
| HapII | CCGG | 2 cut(s) | 117, 2086 |
| HgaI | GACGC | 1 cut(s) | 2122 |
| HhaI | GCGC | 2 cut(s) | 691, 1735 |
| Hin1I | GRCGYC | 1 cut(s) | 2114 |
| Hin6I | GCGC | 2 cut(s) | 689, 1733 |
| HinP1I | GCGC | 2 cut(s) | 689, 1733 |
| HincII | GTYRAC | 5 cut(s) | 856, 963, 1084, 1900, 2007 |
| HindII | GTYRAC | 5 cut(s) | 856, 963, 1084, 1900, 2007 |
| HpaII | CCGG | 2 cut(s) | 117, 2086 |
| HphI | GGTGA | 5 cut(s) | 62, 268, 1138, 1819, 2141 |
| Hpy99I | CGWCG | 1 cut(s) | 85 |
| HpyAV | CCTTC | 8 cut(s) | 439, 523, 1309, 1720, 1952, 2030, 2498, 2587 |
| HpyCH4III | ACNGT | 5 cut(s) | 94, 839, 1883, 2968, 2998 |
| HpyCH4IV | ACGT | 4 cut(s) | 15, 824, 1868, 2241 |
| HpyF3I | CTNAG | 8 cut(s) | 482, 631, 921, 1352, 1965, 2053, 2604, 2741 |
| HpySE526I | ACGT | 4 cut(s) | 15, 824, 1868, 2241 |
| Hsp92I | GRCGYC | 1 cut(s) | 2114 |
| HspAI | GCGC | 2 cut(s) | 689, 1733 |
| Ksp22I | TGATCA | 1 cut(s) | 138 |
| LmnI | GCTCC | 3 cut(s) | 119, 922, 1035 |
| Lsp1109I | GCAGC | 4 cut(s) | 412, 1504, 2885, 3046 |
| LweI | GCATC | 8 cut(s) | 421, 676, 1291, 1543, 2049, 2281, 2676, 2885 |
| MabI | ACCWGGT | 2 cut(s) | 849, 1893 |
| MaeI | CTAG | 3 cut(s) | 1103, 1547, 3027 |
| MaeII | ACGT | 4 cut(s) | 15, 824, 1868, 2241 |
| MaeIII | GTNAC | 2 cut(s) | 88, 1307 |
| MfeI | CAATTG | 1 cut(s) | 1584 |
| MflI | RGATCY | 5 cut(s) | 896, 1654, 1940, 2698, 2896 |
| MhlI | GDGCHC | 6 cut(s) | 116, 124, 876, 1920, 1966, 2996 |
| MlyI | GAGTC | 6 cut(s) | 127, 407, 1262, 1567, 2434, 2606 |
| MmeI | TCCRAC | 5 cut(s) | 104, 325, 1195, 2519, 2987 |
| Mph1103I | ATGCAT | 1 cut(s) | 1306 |
| MroXI | GAANNNNTTC | 3 cut(s) | 626, 2487, 2637 |
| MslI | CAYNNNNRTG | 3 cut(s) | 825, 1487, 2358 |
| MspA1I | CMGCKG | 1 cut(s) | 1517 |
| MspCI | CTTAAG | 2 cut(s) | 977, 2021 |
| MspI | CCGG | 2 cut(s) | 117, 2086 |
| MspR9I | CCNGG | 4 cut(s) | 118, 851, 1895, 2087 |
| MunI | CAATTG | 1 cut(s) | 1584 |
| MvaI | CCWGG | 2 cut(s) | 851, 1895 |
| NciI | CCSGG | 2 cut(s) | 118, 2087 |
| NcoI | CCATGG | 3 cut(s) | 1031, 2075, 2900 |
| NlaIV | GGNNCC | 2 cut(s) | 2014, 2898 |
| NmuCI | GTSAC | 1 cut(s) | 88 |
| NsiI | ATGCAT | 1 cut(s) | 1306 |
| NspI | RCATGY | 9 cut(s) | 628, 1050, 1090, 1308, 1498, 2069, 2094, 2538, 3013 |
| NspV | TTCGAA | 1 cut(s) | 2612 |
| PaeI | GCATGC | 2 cut(s) | 2094, 3013 |
| PagI | TCATGA | 3 cut(s) | 2491, 2656, 2860 |
| PceI | AGGCCT | 2 cut(s) | 581, 1451 |
| PciI | ACATGT | 4 cut(s) | 624, 1086, 1494, 2534 |
| PdmI | GAANNNNTTC | 3 cut(s) | 626, 2487, 2637 |
| PfeI | GAWTC | 6 cut(s) | 260, 1109, 2435, 2495, 2516, 2908 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2332 |
| PkrI | GCNGC | 4 cut(s) | 427, 1519, 2875, 3036 |
| Ple19I | CGATCG | 1 cut(s) | 3077 |
| PleI | GAGTC | 6 cut(s) | 127, 406, 1262, 1567, 2433, 2605 |
| PmaCI | CACGTG | 1 cut(s) | 16 |
| PmlI | CACGTG | 1 cut(s) | 16 |
| PpsI | GAGTC | 6 cut(s) | 127, 406, 1262, 1567, 2433, 2605 |
| Ppu21I | YACGTR | 3 cut(s) | 16, 825, 1869 |
| PpuMI | RGGWCCY | 2 cut(s) | 2651, 3091 |
| PscI | ACATGT | 4 cut(s) | 624, 1086, 1494, 2534 |
| PshBI | ATTAAT | 1 cut(s) | 2105 |
| Psp124BI | GAGCTC | 1 cut(s) | 116 |
| Psp5II | RGGWCCY | 2 cut(s) | 2651, 3091 |
| Psp6I | CCWGG | 2 cut(s) | 849, 1893 |
| PspCI | CACGTG | 1 cut(s) | 16 |
| PspFI | CCCAGC | 2 cut(s) | 573, 1443 |
| PspGI | CCWGG | 2 cut(s) | 849, 1893 |
| PspN4I | GGNNCC | 2 cut(s) | 2014, 2898 |
| PspPI | GGNCC | 3 cut(s) | 730, 2651, 3091 |
| PspPPI | RGGWCCY | 2 cut(s) | 2651, 3091 |
| PstI | CTGCAG | 1 cut(s) | 430 |
| PsuI | RGATCY | 5 cut(s) | 896, 1654, 1940, 2698, 2896 |
| PvuI | CGATCG | 1 cut(s) | 3077 |
| PvuII | CAGCTG | 1 cut(s) | 1517 |
| RsaI | GTAC | 3 cut(s) | 466, 1336, 1630 |
| RsaNI | GTAC | 3 cut(s) | 465, 1335, 1629 |
| RseI | CAYNNNNRTG | 3 cut(s) | 825, 1487, 2358 |
| SacI | GAGCTC | 1 cut(s) | 116 |
| SatI | GCNGC | 4 cut(s) | 426, 1518, 2874, 3035 |
| Sau96I | GGNCC | 3 cut(s) | 730, 2651, 3091 |
| ScaI | AGTACT | 2 cut(s) | 466, 1336 |
| SchI | GAGTC | 6 cut(s) | 127, 407, 1262, 1567, 2434, 2606 |
| ScrFI | CCNGG | 4 cut(s) | 118, 851, 1895, 2087 |
| SduI | GDGCHC | 6 cut(s) | 116, 124, 876, 1920, 1966, 2996 |
| SexAI | ACCWGGT | 2 cut(s) | 849, 1893 |
| SfaNI | GCATC | 8 cut(s) | 421, 676, 1291, 1543, 2049, 2281, 2676, 2885 |
| SfcI | CTRYAG | 3 cut(s) | 426, 1000, 2044 |
| SfuI | TTCGAA | 1 cut(s) | 2612 |
| SinI | GGWCC | 3 cut(s) | 730, 2651, 3091 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 825, 1487, 2358 |
| SmlI | CTYRAG | 5 cut(s) | 470, 977, 1340, 2021, 2567 |
| SmoI | CTYRAG | 5 cut(s) | 470, 977, 1340, 2021, 2567 |
| SnaBI | TACGTA | 2 cut(s) | 825, 1869 |
| SphI | GCATGC | 2 cut(s) | 2094, 3013 |
| SseBI | AGGCCT | 2 cut(s) | 581, 1451 |
| SsiI | CCGC | 3 cut(s) | 100, 176, 2806 |
| SspI | AATATT | 1 cut(s) | 2731 |
| SspMI | CTAG | 3 cut(s) | 1103, 1547, 3027 |
| SstI | GAGCTC | 1 cut(s) | 116 |
| StuI | AGGCCT | 2 cut(s) | 581, 1451 |
| StyD4I | CCNGG | 4 cut(s) | 116, 849, 1893, 2085 |
| StyI | CCWWGG | 6 cut(s) | 1031, 1607, 1682, 2075, 2371, 2900 |
| TaaI | ACNGT | 5 cut(s) | 94, 839, 1883, 2968, 2998 |
| TaiI | ACGT | 4 cut(s) | 18, 827, 1871, 2244 |
| TatI | WGTACW | 2 cut(s) | 464, 1334 |
| TfiI | GAWTC | 6 cut(s) | 260, 1109, 2435, 2495, 2516, 2908 |
| TscAI | CASTG | 7 cut(s) | 844, 1081, 1291, 1888, 2402, 2687, 3003 |
| TseFI | GTSAC | 1 cut(s) | 88 |
| TseI | GCWGC | 4 cut(s) | 425, 1517, 2873, 3034 |
| Tsp45I | GTSAC | 1 cut(s) | 88 |
| TspGWI | ACGGA | 1 cut(s) | 184 |
| TspRI | CASTG | 7 cut(s) | 844, 1081, 1291, 1888, 2402, 2687, 3003 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2332 |
| Vha464I | CTTAAG | 2 cut(s) | 977, 2021 |
| VpaK11BI | GGWCC | 3 cut(s) | 730, 2651, 3091 |
| VspI | ATTAAT | 1 cut(s) | 2105 |
| XapI | RAATTY | 4 cut(s) | 75, 521, 1542, 2637 |
| XbaI | TCTAGA | 1 cut(s) | 3026 |
| XceI | RCATGY | 9 cut(s) | 628, 1050, 1090, 1308, 1498, 2069, 2094, 2538, 3013 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 757, 1038, 1801 |
| XmiI | GTMKAC | 2 cut(s) | 362, 2953 |
| XmnI | GAANNNNTTC | 3 cut(s) | 626, 2487, 2637 |
| XspI | CTAG | 3 cut(s) | 1103, 1547, 3027 |
| ZrmI | AGTACT | 2 cut(s) | 466, 1336 |
| Zsp2I | ATGCAT | 1 cut(s) | 1306 |