SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HIRAN | PF08797 | 109 - 200 | 1.9e-10 | HIRAN domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 764 |
| AccIII | TCCGGA | 1 cut(s) | 199 |
| AciI | CCGC | 5 cut(s) | 100, 176, 344, 544, 627 |
| AclWI | GGATC | 1 cut(s) | 443 |
| AcoI | YGGCCR | 1 cut(s) | 84 |
| AcsI | RAATTY | 6 cut(s) | 75, 277, 412, 517, 563, 923 |
| AcvI | CACGTG | 1 cut(s) | 16 |
| AfaI | GTAC | 3 cut(s) | 29, 868, 906 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 99 |
| AflIII | ACRYGT | 1 cut(s) | 13 |
| AgsI | TTSAA | 3 cut(s) | 621, 688, 847 |
| AhlI | ACTAGT | 1 cut(s) | 353 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 423, 455 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 98, 130, 278, 310 |
| AluBI | AGCT | 3 cut(s) | 114, 420, 734 |
| AluI | AGCT | 3 cut(s) | 114, 420, 734 |
| Alw21I | GWGCWC | 1 cut(s) | 116 |
| Alw26I | GTCTC | 2 cut(s) | 262, 774 |
| AlwI | GGATC | 1 cut(s) | 443 |
| Aor13HI | TCCGGA | 1 cut(s) | 199 |
| AoxI | GGCC | 4 cut(s) | 54, 84, 887, 981 |
| ApeKI | GCWGC | 2 cut(s) | 629, 827 |
| ApoI | RAATTY | 6 cut(s) | 75, 277, 412, 517, 563, 923 |
| AspS9I | GGNCC | 1 cut(s) | 34 |
| AsuC2I | CCSGG | 1 cut(s) | 118 |
| AsuHPI | GGTGA | 3 cut(s) | 62, 277, 670 |
| AvaII | GGWCC | 1 cut(s) | 34 |
| BanII | GRGCYC | 2 cut(s) | 116, 124 |
| BbrPI | CACGTG | 1 cut(s) | 16 |
| BbsI | GAAGAC | 2 cut(s) | 636, 795 |
| Bbv12I | GWGCWC | 1 cut(s) | 116 |
| BbvI | GCAGC | 2 cut(s) | 616, 814 |
| BccI | CCATC | 4 cut(s) | 46, 65, 75, 281 |
| BceAI | ACGGC | 2 cut(s) | 71, 99 |
| BcnI | CCSGG | 1 cut(s) | 118 |
| BcoDI | GTCTC | 2 cut(s) | 262, 774 |
| BcuI | ACTAGT | 1 cut(s) | 353 |
| BfaI | CTAG | 1 cut(s) | 354 |
| BfmI | CTRYAG | 1 cut(s) | 828 |
| BisI | GCNGC | 2 cut(s) | 630, 828 |
| BlsI | GCNGC | 2 cut(s) | 631, 829 |
| BmcAI | AGTACT | 2 cut(s) | 868, 906 |
| Bme1390I | CCNGG | 1 cut(s) | 118 |
| Bme18I | GGWCC | 1 cut(s) | 34 |
| BmgT120I | GGNCC | 1 cut(s) | 34 |
| BmiI | GGNNCC | 3 cut(s) | 36, 204, 858 |
| BmrFI | CCNGG | 1 cut(s) | 118 |
| BmsI | GCATC | 2 cut(s) | 567, 823 |
| BpiI | GAAGAC | 2 cut(s) | 636, 795 |
| BpuEI | CTTGAG | 1 cut(s) | 857 |
| BpuMI | CCSGG | 1 cut(s) | 118 |
| BsaAI | YACGTR | 1 cut(s) | 16 |
| BsaBI | GATNNNNATC | 2 cut(s) | 137, 666 |
| BsaI | GGTCTC | 1 cut(s) | 262 |
| BsaJI | CCNNGG | 1 cut(s) | 117 |
| BsaWI | WCCGGW | 1 cut(s) | 199 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 98, 128, 891, 921 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 99 |
| Bse1I | ACTGG | 1 cut(s) | 252 |
| Bse8I | GATNNNNATC | 2 cut(s) | 137, 666 |
| BseAI | TCCGGA | 1 cut(s) | 199 |
| BseDI | CCNNGG | 1 cut(s) | 117 |
| BseGI | GGATG | 5 cut(s) | 292, 391, 733, 921, 967 |
| BseJI | GATNNNNATC | 2 cut(s) | 137, 666 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 99 |
| BseMII | CTCAG | 2 cut(s) | 287, 875 |
| BseNI | ACTGG | 1 cut(s) | 252 |
| BseX3I | CGGCCG | 1 cut(s) | 84 |
| BseXI | GCAGC | 2 cut(s) | 616, 814 |
| BseYI | CCCAGC | 1 cut(s) | 975 |
| Bsh1285I | CGRYCG | 1 cut(s) | 87 |
| BshFI | GGCC | 4 cut(s) | 56, 86, 889, 983 |
| BsiEI | CGRYCG | 1 cut(s) | 87 |
| BsiHKAI | GWGCWC | 1 cut(s) | 116 |
| BsiSI | CCGG | 3 cut(s) | 117, 200, 308 |
| BslFI | GGGAC | 1 cut(s) | 20 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 99 |
| BsmAI | GTCTC | 2 cut(s) | 262, 774 |
| BsmBI | CGTCTC | 1 cut(s) | 774 |
| BsmFI | GGGAC | 1 cut(s) | 20 |
| BsnI | GGCC | 4 cut(s) | 56, 86, 889, 983 |
| Bso31I | GGTCTC | 1 cut(s) | 262 |
| Bsp1286I | GDGCHC | 2 cut(s) | 116, 124 |
| Bsp13I | TCCGGA | 1 cut(s) | 199 |
| Bsp143I | GATC | 3 cut(s) | 22, 435, 721 |
| BspACI | CCGC | 5 cut(s) | 100, 176, 344, 544, 627 |
| BspANI | GGCC | 4 cut(s) | 56, 86, 889, 983 |
| BspCNI | CTCAG | 2 cut(s) | 286, 876 |
| BspEI | TCCGGA | 1 cut(s) | 199 |
| BspLI | GGNNCC | 3 cut(s) | 36, 204, 858 |
| BspMAI | CTGCAG | 1 cut(s) | 832 |
| BspPI | GGATC | 1 cut(s) | 443 |
| BspTNI | GGTCTC | 1 cut(s) | 262 |
| BsrI | ACTGG | 1 cut(s) | 252 |
| BssECI | CCNNGG | 1 cut(s) | 117 |
| BssMI | GATC | 3 cut(s) | 22, 435, 721 |
| BssNAI | GTATAC | 1 cut(s) | 765 |
| Bst1107I | GTATAC | 1 cut(s) | 765 |
| Bst4CI | ACNGT | 2 cut(s) | 242, 762 |
| Bst6I | CTCTTC | 1 cut(s) | 969 |
| BstBAI | YACGTR | 1 cut(s) | 16 |
| BstC8I | GCNNGC | 1 cut(s) | 124 |
| BstDEI | CTNAG | 2 cut(s) | 273, 884 |
| BstF5I | GGATG | 5 cut(s) | 292, 391, 733, 921, 967 |
| BstKTI | GATC | 3 cut(s) | 25, 438, 724 |
| BstMAI | GTCTC | 2 cut(s) | 262, 774 |
| BstMBI | GATC | 3 cut(s) | 22, 435, 721 |
| BstMCI | CGRYCG | 1 cut(s) | 87 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 833 |
| BstSCI | CCNGG | 1 cut(s) | 116 |
| BstSFI | CTRYAG | 1 cut(s) | 828 |
| BstV1I | GCAGC | 2 cut(s) | 616, 814 |
| BstV2I | GAAGAC | 2 cut(s) | 636, 795 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 489 |
| BstZ17I | GTATAC | 1 cut(s) | 765 |
| BstZI | CGGCCG | 1 cut(s) | 84 |
| BsuRI | GGCC | 4 cut(s) | 56, 86, 889, 983 |
| BtsCI | GGATG | 5 cut(s) | 292, 391, 733, 921, 967 |
| BtsIMutI | CAGTG | 1 cut(s) | 261 |
| Cac8I | GCNNGC | 1 cut(s) | 124 |
| Cfr13I | GGNCC | 1 cut(s) | 34 |
| Csp6I | GTAC | 3 cut(s) | 28, 867, 905 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 802, 837 |
| CviAII | CATG | 3 cut(s) | 364, 574, 648 |
| CviQI | GTAC | 3 cut(s) | 28, 867, 905 |
| DdeI | CTNAG | 2 cut(s) | 273, 884 |
| DpnI | GATC | 3 cut(s) | 24, 437, 723 |
| DpnII | GATC | 3 cut(s) | 22, 435, 721 |
| EaeI | YGGCCR | 1 cut(s) | 84 |
| EagI | CGGCCG | 1 cut(s) | 84 |
| Eam1104I | CTCTTC | 1 cut(s) | 969 |
| EarI | CTCTTC | 1 cut(s) | 969 |
| Ecl136II | GAGCTC | 1 cut(s) | 114 |
| EclXI | CGGCCG | 1 cut(s) | 84 |
| Eco147I | AGGCCT | 1 cut(s) | 983 |
| Eco24I | GRGCYC | 2 cut(s) | 116, 124 |
| Eco31I | GGTCTC | 1 cut(s) | 262 |
| Eco47I | GGWCC | 1 cut(s) | 34 |
| Eco52I | CGGCCG | 1 cut(s) | 84 |
| Eco53kI | GAGCTC | 1 cut(s) | 114 |
| Eco72I | CACGTG | 1 cut(s) | 16 |
| EcoICRI | GAGCTC | 1 cut(s) | 114 |
| EcoO109I | RGGNCCY | 1 cut(s) | 34 |
| EcoRI | GAATTC | 1 cut(s) | 517 |
| EcoT38I | GRGCYC | 2 cut(s) | 116, 124 |
| Esp3I | CGTCTC | 1 cut(s) | 774 |
| FaeI | CATG | 3 cut(s) | 367, 577, 651 |
| FaqI | GGGAC | 1 cut(s) | 20 |
| FatI | CATG | 3 cut(s) | 363, 573, 647 |
| FblI | GTMKAC | 1 cut(s) | 764 |
| Fnu4HI | GCNGC | 2 cut(s) | 630, 828 |
| FokI | GGATG | 5 cut(s) | 299, 378, 740, 928, 954 |
| FriOI | GRGCYC | 2 cut(s) | 116, 124 |
| Fsp4HI | GCNGC | 2 cut(s) | 630, 828 |
| FspBI | CTAG | 1 cut(s) | 354 |
| GluI | GCNGC | 2 cut(s) | 630, 828 |
| GsaI | CCCAGC | 1 cut(s) | 979 |
| HaeIII | GGCC | 4 cut(s) | 56, 86, 889, 983 |
| HapII | CCGG | 3 cut(s) | 117, 200, 308 |
| Hin1II | CATG | 3 cut(s) | 367, 577, 651 |
| HinfI | GANTC | 4 cut(s) | 133, 196, 662, 800 |
| HpaII | CCGG | 3 cut(s) | 117, 200, 308 |
| HphI | GGTGA | 3 cut(s) | 62, 277, 670 |
| Hpy166II | GTNNAC | 2 cut(s) | 245, 765 |
| Hpy188I | TCNGA | 6 cut(s) | 81, 276, 714, 799, 885, 922 |
| Hpy188III | TCNNGA | 8 cut(s) | 71, 200, 214, 236, 448, 462, 725, 946 |
| Hpy8I | GTNNAC | 2 cut(s) | 245, 765 |
| Hpy99I | CGWCG | 2 cut(s) | 85, 454 |
| HpyAV | CCTTC | 7 cut(s) | 180, 202, 220, 414, 841, 847, 925 |
| HpyCH4III | ACNGT | 2 cut(s) | 242, 762 |
| HpyCH4IV | ACGT | 1 cut(s) | 15 |
| HpyCH4V | TGCA | 4 cut(s) | 153, 259, 580, 830 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 833 |
| HpyF3I | CTNAG | 2 cut(s) | 273, 884 |
| HpySE526I | ACGT | 1 cut(s) | 15 |
| Hsp92II | CATG | 3 cut(s) | 367, 577, 651 |
| Kpn2I | TCCGGA | 1 cut(s) | 199 |
| Kzo9I | GATC | 3 cut(s) | 22, 435, 721 |
| LmnI | GCTCC | 3 cut(s) | 119, 202, 290 |
| Lsp1109I | GCAGC | 2 cut(s) | 616, 814 |
| LweI | GCATC | 2 cut(s) | 567, 823 |
| MaeI | CTAG | 1 cut(s) | 354 |
| MaeII | ACGT | 1 cut(s) | 15 |
| MaeIII | GTNAC | 3 cut(s) | 88, 586, 839 |
| MalI | GATC | 3 cut(s) | 24, 437, 723 |
| MboI | GATC | 3 cut(s) | 22, 435, 721 |
| MboII | GAAGA | 4 cut(s) | 636, 795, 797, 956 |
| MhlI | GDGCHC | 2 cut(s) | 116, 124 |
| MlyI | GAGTC | 1 cut(s) | 809 |
| MmeI | TCCRAC | 3 cut(s) | 104, 354, 727 |
| MroI | TCCGGA | 1 cut(s) | 199 |
| MseI | TTAA | 3 cut(s) | 96, 531, 879 |
| MspA1I | CMGCKG | 1 cut(s) | 629 |
| MspI | CCGG | 3 cut(s) | 117, 200, 308 |
| MspR9I | CCNGG | 1 cut(s) | 118 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 833 |
| NciI | CCSGG | 1 cut(s) | 118 |
| NdeII | GATC | 3 cut(s) | 22, 435, 721 |
| NlaIII | CATG | 3 cut(s) | 367, 577, 651 |
| NlaIV | GGNNCC | 3 cut(s) | 36, 204, 858 |
| NmuCI | GTSAC | 2 cut(s) | 88, 586 |
| PceI | AGGCCT | 1 cut(s) | 983 |
| PfeI | GAWTC | 3 cut(s) | 133, 196, 662 |
| PkrI | GCNGC | 2 cut(s) | 631, 829 |
| PleI | GAGTC | 1 cut(s) | 808 |
| PmaCI | CACGTG | 1 cut(s) | 16 |
| PmlI | CACGTG | 1 cut(s) | 16 |
| PpsI | GAGTC | 1 cut(s) | 808 |
| Ppu21I | YACGTR | 1 cut(s) | 16 |
| PpuMI | RGGWCCY | 1 cut(s) | 34 |
| Psp124BI | GAGCTC | 1 cut(s) | 116 |
| Psp5II | RGGWCCY | 1 cut(s) | 34 |
| PspCI | CACGTG | 1 cut(s) | 16 |
| PspFI | CCCAGC | 1 cut(s) | 975 |
| PspN4I | GGNNCC | 3 cut(s) | 36, 204, 858 |
| PspPI | GGNCC | 1 cut(s) | 34 |
| PspPPI | RGGWCCY | 1 cut(s) | 34 |
| PstI | CTGCAG | 1 cut(s) | 832 |
| RsaI | GTAC | 3 cut(s) | 29, 868, 906 |
| RsaNI | GTAC | 3 cut(s) | 28, 867, 905 |
| SacI | GAGCTC | 1 cut(s) | 116 |
| SaqAI | TTAA | 3 cut(s) | 96, 531, 879 |
| SatI | GCNGC | 2 cut(s) | 630, 828 |
| Sau3AI | GATC | 3 cut(s) | 22, 435, 721 |
| Sau96I | GGNCC | 1 cut(s) | 34 |
| ScaI | AGTACT | 2 cut(s) | 868, 906 |
| SchI | GAGTC | 1 cut(s) | 809 |
| ScrFI | CCNGG | 1 cut(s) | 118 |
| SduI | GDGCHC | 2 cut(s) | 116, 124 |
| SfaNI | GCATC | 2 cut(s) | 567, 823 |
| SfcI | CTRYAG | 1 cut(s) | 828 |
| SinI | GGWCC | 1 cut(s) | 34 |
| SmlI | CTYRAG | 1 cut(s) | 872 |
| SmoI | CTYRAG | 1 cut(s) | 872 |
| SpeI | ACTAGT | 1 cut(s) | 353 |
| SseBI | AGGCCT | 1 cut(s) | 983 |
| SsiI | CCGC | 5 cut(s) | 100, 176, 344, 544, 627 |
| SspMI | CTAG | 1 cut(s) | 354 |
| SstI | GAGCTC | 1 cut(s) | 116 |
| StuI | AGGCCT | 1 cut(s) | 983 |
| StyD4I | CCNGG | 1 cut(s) | 116 |
| TaaI | ACNGT | 2 cut(s) | 242, 762 |
| TaiI | ACGT | 1 cut(s) | 18 |
| TaqI | TCGA | 5 cut(s) | 131, 184, 350, 449, 945 |
| TatI | WGTACW | 2 cut(s) | 866, 904 |
| TfiI | GAWTC | 3 cut(s) | 133, 196, 662 |
| Tru1I | TTAA | 3 cut(s) | 96, 531, 879 |
| Tru9I | TTAA | 3 cut(s) | 96, 531, 879 |
| TscAI | CASTG | 1 cut(s) | 261 |
| TseFI | GTSAC | 2 cut(s) | 88, 586 |
| TseI | GCWGC | 2 cut(s) | 629, 827 |
| Tsp45I | GTSAC | 2 cut(s) | 88, 586 |
| TspDTI | ATGAA | 7 cut(s) | 183, 380, 380, 602, 636, 744, 956 |
| TspRI | CASTG | 1 cut(s) | 261 |
| VpaK11BI | GGWCC | 1 cut(s) | 34 |
| XapI | RAATTY | 6 cut(s) | 75, 277, 412, 517, 563, 923 |
| XmiI | GTMKAC | 1 cut(s) | 764 |
| XspI | CTAG | 1 cut(s) | 354 |
| ZrmI | AGTACT | 2 cut(s) | 868, 906 |