SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| UBA_RAD5A | PF24559 | 175 - 217 | 5e-08 | DNA repair protein RAD5A UBA domain |
| HIRAN | PF08797 | 267 - 358 | 1.4e-11 | HIRAN domain |
| ResIII | PF04851 | 486 - 715 | 4.1e-07 | Type III restriction enzyme, res subunit |
| SNF2-rel_dom | PF00176 | 488 - 848 | 8.3e-75 | SNF2-related domain |
| DEAD | PF00270 | 556 - 721 | 8.2e-07 | DEAD/DEAH box helicase |
| zf-C3HC4_3 | PF13920 | 909 - 953 | 4e-08 | Zinc finger, C3HC4 type (RING finger) |
| zf-C3HC4_2 | PF13923 | 911 - 951 | 7.2e-07 | Zinc finger, C3HC4 type (RING finger) |
| zf-RING_2 | PF13639 | 911 - 952 | 2e-06 | Ring finger domain |
| zf-C3HC4 | PF00097 | 912 - 951 | 3.7e-08 | Zinc finger, C3HC4 type (RING finger) |
| zf-C3HC4_4 | PF15227 | 912 - 951 | 4.8e-08 | zinc finger of C3HC4-type, RING |
| zf-RING_UBOX | PF13445 | 912 - 949 | 2.7e-08 | RING-type zinc-finger |
| Helicase_C | PF00271 | 987 - 1096 | 9.7e-23 | Helicase conserved C-terminal domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1989, 3224 |
| Acc16I | TGCGCA | 1 cut(s) | 2782 |
| Acc36I | ACCTGC | 1 cut(s) | 2894 |
| AccB1I | GGYRCC | 1 cut(s) | 1319 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 963, 2834 |
| AccI | GTMKAC | 1 cut(s) | 2364 |
| AccII | CGCG | 4 cut(s) | 122, 192, 579, 667 |
| AciI | CCGC | 8 cut(s) | 106, 122, 192, 344, 612, 630, 983, 2603 |
| AclWI | GGATC | 6 cut(s) | 2249, 2582, 2756, 3045, 3224, 3237 |
| AcoI | YGGCCR | 2 cut(s) | 1199, 3286 |
| AcuI | CTGAAG | 3 cut(s) | 1320, 1475, 1566 |
| AcyI | GRCGYC | 1 cut(s) | 24 |
| AdeI | CACNNNGTG | 1 cut(s) | 1037 |
| AfaI | GTAC | 4 cut(s) | 1438, 1744, 1913, 2769 |
| AfeI | AGCGCT | 1 cut(s) | 2557 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 122, 406, 963, 1805, 1849, 2834, 2908 |
| AflII | CTTAAG | 1 cut(s) | 146 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1117 |
| AjnI | CCWGG | 5 cut(s) | 115, 288, 423, 690, 2907 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 897, 929 |
| AleI | CACNNNNGTG | 1 cut(s) | 1905 |
| Alw21I | GWGCWC | 4 cut(s) | 603, 1860, 3391, 3432 |
| Alw26I | GTCTC | 6 cut(s) | 161, 170, 354, 736, 2312, 3105 |
| AlwI | GGATC | 6 cut(s) | 2249, 2582, 2756, 3045, 3224, 3237 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1877, 2834, 2993 |
| Ama87I | CYCGRG | 1 cut(s) | 746 |
| Aor51HI | AGCGCT | 1 cut(s) | 2557 |
| AoxI | GGCC | 6 cut(s) | 438, 566, 674, 1199, 2339, 3286 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3016, 3048 |
| AseI | ATTAAT | 2 cut(s) | 1149, 2228 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 186, 225, 297, 468, 1598, 1885, 2976 |
| AspLEI | GCGC | 5 cut(s) | 122, 669, 2464, 2558, 2783 |
| AspS9I | GGNCC | 4 cut(s) | 397, 566, 674, 2340 |
| AsuII | TTCGAA | 3 cut(s) | 54, 520, 830 |
| AvaI | CYCGRG | 1 cut(s) | 746 |
| AvaII | GGWCC | 1 cut(s) | 397 |
| BaeGI | GKGCMC | 2 cut(s) | 1322, 1811 |
| BalI | TGGCCA | 1 cut(s) | 3288 |
| BamHI | GGATCC | 1 cut(s) | 3229 |
| BanI | GGYRCC | 1 cut(s) | 1319 |
| BanII | GRGCYC | 7 cut(s) | 130, 270, 324, 494, 1860, 3391, 3432 |
| BbsI | GAAGAC | 5 cut(s) | 21, 977, 1691, 2166, 2798 |
| Bbv12I | GWGCWC | 4 cut(s) | 603, 1860, 3391, 3432 |
| BceAI | ACGGC | 2 cut(s) | 1186, 2886 |
| BciT130I | CCWGG | 5 cut(s) | 117, 290, 425, 692, 2909 |
| BciVI | GTATCC | 3 cut(s) | 1173, 1765, 2720 |
| BclI | TGATCA | 2 cut(s) | 2274, 2449 |
| BcoDI | GTCTC | 6 cut(s) | 161, 170, 354, 736, 2312, 3105 |
| BfaI | CTAG | 5 cut(s) | 596, 606, 1130, 1661, 2640 |
| BfmI | CTRYAG | 3 cut(s) | 2167, 3204, 3249 |
| BfoI | RGCGCY | 1 cut(s) | 2559 |
| BfrI | CTTAAG | 1 cut(s) | 146 |
| BfuAI | ACCTGC | 1 cut(s) | 2894 |
| BfuI | GTATCC | 3 cut(s) | 1173, 1765, 2720 |
| BglII | AGATCT | 1 cut(s) | 1231 |
| BlpI | GCTNAGC | 1 cut(s) | 480 |
| BmcAI | AGTACT | 1 cut(s) | 1438 |
| Bme1390I | CCNGG | 5 cut(s) | 117, 290, 425, 692, 2909 |
| Bme18I | GGWCC | 1 cut(s) | 397 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1117 |
| BmeT110I | CYCGRG | 1 cut(s) | 746 |
| BmgT120I | GGNCC | 4 cut(s) | 397, 566, 674, 2340 |
| BmrFI | CCNGG | 5 cut(s) | 117, 290, 425, 692, 2909 |
| BmsI | GCATC | 9 cut(s) | 599, 751, 1041, 1657, 1991, 2386, 2407, 2831, 3218 |
| BoxI | GACNNNNGTC | 1 cut(s) | 254 |
| BpiI | GAAGAC | 5 cut(s) | 21, 977, 1691, 2166, 2798 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 235, 267 |
| BpmI | CTGGAG | 2 cut(s) | 455, 2343 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2088 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 480 |
| Bpu14I | TTCGAA | 3 cut(s) | 54, 520, 830 |
| BpuEI | CTTGAG | 4 cut(s) | 874, 2519, 2664, 2797 |
| BsaHI | GRCGYC | 1 cut(s) | 24 |
| BsaI | GGTCTC | 2 cut(s) | 170, 736 |
| BsaJI | CCNNGG | 8 cut(s) | 162, 423, 957, 1799, 2198, 2943, 3233, 3333 |
| BsaWI | WCCGGW | 1 cut(s) | 73 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 332, 362, 2337, 2367 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 122, 406, 963, 1805, 1849, 2834, 2908 |
| Bse3DI | GCAATG | 2 cut(s) | 1677, 2864 |
| BseBI | CCWGG | 5 cut(s) | 117, 290, 425, 692, 2909 |
| BseDI | CCNNGG | 8 cut(s) | 162, 423, 957, 1799, 2198, 2943, 3233, 3333 |
| BseGI | GGATG | 7 cut(s) | 178, 1491, 1537, 1773, 1858, 2401, 3167 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 122, 406, 963, 1805, 1849, 2834, 2908 |
| BseMI | GCAATG | 2 cut(s) | 1677, 2864 |
| BseMII | CTCAG | 9 cut(s) | 344, 369, 435, 561, 564, 2102, 2258, 3071, 3116 |
| BseSI | GKGCMC | 2 cut(s) | 1322, 1811 |
| BseX3I | CGGCCG | 1 cut(s) | 1199 |
| BseYI | CCCAGC | 2 cut(s) | 562, 1545 |
| BsgI | GTGCAG | 5 cut(s) | 801, 1014, 1269, 1416, 2815 |
| Bsh1236I | CGCG | 4 cut(s) | 122, 192, 579, 667 |
| Bsh1285I | CGRYCG | 2 cut(s) | 141, 1202 |
| BshFI | GGCC | 6 cut(s) | 440, 568, 676, 1201, 2341, 3288 |
| BshNI | GGYRCC | 1 cut(s) | 1319 |
| BsiEI | CGRYCG | 2 cut(s) | 141, 1202 |
| BsiHKAI | GWGCWC | 4 cut(s) | 603, 1860, 3391, 3432 |
| BsiHKCI | CYCGRG | 1 cut(s) | 746 |
| BsiSI | CCGG | 3 cut(s) | 74, 677, 3384 |
| BslFI | GGGAC | 5 cut(s) | 1689, 1809, 2657, 2721, 3034 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 122, 406, 963, 1805, 1849, 2834, 2908 |
| BsmAI | GTCTC | 6 cut(s) | 161, 170, 354, 736, 2312, 3105 |
| BsmBI | CGTCTC | 1 cut(s) | 161 |
| BsmFI | GGGAC | 5 cut(s) | 1689, 1809, 2657, 2721, 3034 |
| BsmI | GAATGC | 1 cut(s) | 3351 |
| BsnI | GGCC | 6 cut(s) | 440, 568, 676, 1201, 2341, 3288 |
| Bso31I | GGTCTC | 2 cut(s) | 170, 736 |
| BsoBI | CYCGRG | 1 cut(s) | 746 |
| Bsp119I | TTCGAA | 3 cut(s) | 54, 520, 830 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 480 |
| Bsp19I | CCATGG | 1 cut(s) | 957 |
| BspACI | CCGC | 8 cut(s) | 106, 122, 192, 344, 612, 630, 983, 2603 |
| BspANI | GGCC | 6 cut(s) | 440, 568, 676, 1201, 2341, 3288 |
| BspCNI | CTCAG | 9 cut(s) | 345, 370, 436, 562, 563, 2101, 2259, 3072, 3115 |
| BspFNI | CGCG | 4 cut(s) | 122, 192, 579, 667 |
| BspHI | TCATGA | 1 cut(s) | 2644 |
| BspMAI | CTGCAG | 1 cut(s) | 3208 |
| BspMI | ACCTGC | 1 cut(s) | 2894 |
| BspPI | GGATC | 6 cut(s) | 2249, 2582, 2756, 3045, 3224, 3237 |
| BspT104I | TTCGAA | 3 cut(s) | 54, 520, 830 |
| BspT107I | GGYRCC | 1 cut(s) | 1319 |
| BspTI | CTTAAG | 1 cut(s) | 146 |
| BspTNI | GGTCTC | 2 cut(s) | 170, 736 |
| BsrDI | GCAATG | 2 cut(s) | 1677, 2864 |
| BssECI | CCNNGG | 8 cut(s) | 162, 423, 957, 1799, 2198, 2943, 3233, 3333 |
| BssNI | GRCGYC | 1 cut(s) | 24 |
| BssT1I | CCWWGG | 3 cut(s) | 957, 1799, 2943 |
| Bst2UI | CCWGG | 5 cut(s) | 117, 290, 425, 692, 2909 |
| Bst4CI | ACNGT | 9 cut(s) | 142, 976, 1431, 1690, 2009, 2199, 2391, 3301, 3334 |
| Bst6I | CTCTTC | 5 cut(s) | 147, 501, 522, 667, 2688 |
| BstACI | GRCGYC | 1 cut(s) | 24 |
| BstAFI | CTTAAG | 1 cut(s) | 146 |
| BstBI | TTCGAA | 3 cut(s) | 54, 520, 830 |
| BstC8I | GCNNGC | 5 cut(s) | 603, 1473, 2819, 2865, 3261 |
| BstDSI | CCRYGG | 4 cut(s) | 957, 2198, 3233, 3333 |
| BstEII | GGTNACC | 2 cut(s) | 1109, 2911 |
| BstF5I | GGATG | 7 cut(s) | 178, 1491, 1537, 1773, 1858, 2401, 3167 |
| BstFNI | CGCG | 4 cut(s) | 122, 192, 579, 667 |
| BstH2I | RGCGCY | 1 cut(s) | 2559 |
| BstHHI | GCGC | 5 cut(s) | 122, 669, 2464, 2558, 2783 |
| BstMAI | GTCTC | 6 cut(s) | 161, 170, 354, 736, 2312, 3105 |
| BstMCI | CGRYCG | 2 cut(s) | 141, 1202 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 32, 673, 787, 2090, 2093, 2099, 2178, 3436 |
| BstNI | CCWGG | 5 cut(s) | 117, 290, 425, 692, 2909 |
| BstNSI | RCATGY | 3 cut(s) | 35, 1449, 2192 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 254 |
| BstPI | GGTNACC | 2 cut(s) | 1109, 2911 |
| BstSCI | CCNGG | 5 cut(s) | 115, 288, 423, 690, 2907 |
| BstSFI | CTRYAG | 3 cut(s) | 2167, 3204, 3249 |
| BstSLI | GKGCMC | 2 cut(s) | 1322, 1811 |
| BstUI | CGCG | 4 cut(s) | 122, 192, 579, 667 |
| BstV2I | GAAGAC | 5 cut(s) | 21, 977, 1691, 2166, 2798 |
| BstX2I | RGATCY | 3 cut(s) | 1231, 3037, 3229 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1907, 2746 |
| BstYI | RGATCY | 3 cut(s) | 1231, 3037, 3229 |
| BstZI | CGGCCG | 1 cut(s) | 1199 |
| BsuI | GTATCC | 3 cut(s) | 1173, 1765, 2720 |
| BsuRI | GGCC | 6 cut(s) | 440, 568, 676, 1201, 2341, 3288 |
| BtgI | CCRYGG | 4 cut(s) | 957, 2198, 3233, 3333 |
| BtgZI | GCGATG | 1 cut(s) | 3263 |
| BtsCI | GGATG | 7 cut(s) | 178, 1491, 1537, 1773, 1858, 2401, 3167 |
| BtsI | GCAGTG | 2 cut(s) | 813, 2528 |
| BtsIMutI | CAGTG | 8 cut(s) | 813, 1296, 1850, 1920, 2528, 2871, 3026, 3393 |
| BveI | ACCTGC | 1 cut(s) | 2894 |
| Cac8I | GCNNGC | 5 cut(s) | 603, 1473, 2819, 2865, 3261 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1877, 2834, 2993 |
| CciI | TCATGA | 1 cut(s) | 2644 |
| CfoI | GCGC | 5 cut(s) | 122, 669, 2464, 2558, 2783 |
| Cfr13I | GGNCC | 4 cut(s) | 397, 566, 674, 2340 |
| CseI | GACGC | 1 cut(s) | 32 |
| Csp6I | GTAC | 4 cut(s) | 1437, 1743, 1912, 2768 |
| CviQI | GTAC | 4 cut(s) | 1437, 1743, 1912, 2768 |
| DraI | TTTAAA | 1 cut(s) | 3126 |
| DraIII | CACNNNGTG | 1 cut(s) | 1037 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1117 |
| EaeI | YGGCCR | 2 cut(s) | 1199, 3286 |
| EagI | CGGCCG | 1 cut(s) | 1199 |
| Eam1104I | CTCTTC | 5 cut(s) | 147, 501, 522, 667, 2688 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1117 |
| EarI | CTCTTC | 5 cut(s) | 147, 501, 522, 667, 2688 |
| EciI | GGCGGA | 1 cut(s) | 359 |
| Ecl136II | GAGCTC | 3 cut(s) | 1858, 3389, 3430 |
| EclXI | CGGCCG | 1 cut(s) | 1199 |
| Eco130I | CCWWGG | 3 cut(s) | 957, 1799, 2943 |
| Eco147I | AGGCCT | 1 cut(s) | 440 |
| Eco24I | GRGCYC | 7 cut(s) | 130, 270, 324, 494, 1860, 3391, 3432 |
| Eco31I | GGTCTC | 2 cut(s) | 170, 736 |
| Eco47I | GGWCC | 1 cut(s) | 397 |
| Eco47III | AGCGCT | 1 cut(s) | 2557 |
| Eco52I | CGGCCG | 1 cut(s) | 1199 |
| Eco53kI | GAGCTC | 3 cut(s) | 1858, 3389, 3430 |
| Eco57I | CTGAAG | 3 cut(s) | 1320, 1475, 1566 |
| Eco88I | CYCGRG | 1 cut(s) | 746 |
| Eco91I | GGTNACC | 2 cut(s) | 1109, 2911 |
| EcoICRI | GAGCTC | 3 cut(s) | 1858, 3389, 3430 |
| EcoO109I | RGGNCCY | 1 cut(s) | 566 |
| EcoO65I | GGTNACC | 2 cut(s) | 1109, 2911 |
| EcoRI | GAATTC | 4 cut(s) | 69, 81, 1217, 3273 |
| EcoRII | CCWGG | 5 cut(s) | 115, 288, 423, 690, 2907 |
| EcoT14I | CCWWGG | 3 cut(s) | 957, 1799, 2943 |
| EcoT38I | GRGCYC | 7 cut(s) | 130, 270, 324, 494, 1860, 3391, 3432 |
| ErhI | CCWWGG | 3 cut(s) | 957, 1799, 2943 |
| Esp3I | CGTCTC | 1 cut(s) | 161 |
| FaqI | GGGAC | 5 cut(s) | 1689, 1809, 2657, 2721, 3034 |
| FauI | CCCGC | 2 cut(s) | 115, 185 |
| FauNDI | CATATG | 2 cut(s) | 2242, 2741 |
| FbaI | TGATCA | 2 cut(s) | 2274, 2449 |
| FblI | GTMKAC | 1 cut(s) | 2364 |
| FokI | GGATG | 7 cut(s) | 185, 1498, 1524, 1780, 1865, 2408, 3154 |
| FriOI | GRGCYC | 7 cut(s) | 130, 270, 324, 494, 1860, 3391, 3432 |
| FspAI | RTGCGCAY | 1 cut(s) | 2782 |
| FspBI | CTAG | 5 cut(s) | 596, 606, 1130, 1661, 2640 |
| FspI | TGCGCA | 1 cut(s) | 2782 |
| GlaI | GCGC | 5 cut(s) | 121, 668, 2463, 2557, 2782 |
| GsaI | CCCAGC | 2 cut(s) | 566, 1549 |
| GsuI | CTGGAG | 2 cut(s) | 455, 2343 |
| HaeII | RGCGCY | 1 cut(s) | 2559 |
| HaeIII | GGCC | 6 cut(s) | 440, 568, 676, 1201, 2341, 3288 |
| HapII | CCGG | 3 cut(s) | 74, 677, 3384 |
| HgaI | GACGC | 1 cut(s) | 32 |
| HhaI | GCGC | 5 cut(s) | 122, 669, 2464, 2558, 2783 |
| Hin1I | GRCGYC | 1 cut(s) | 24 |
| Hin6I | GCGC | 5 cut(s) | 120, 667, 2462, 2556, 2781 |
| HinP1I | GCGC | 5 cut(s) | 120, 667, 2462, 2556, 2781 |
| HincII | GTYRAC | 2 cut(s) | 2026, 2365 |
| HindII | GTYRAC | 2 cut(s) | 2026, 2365 |
| HindIII | AAGCTT | 1 cut(s) | 467 |
| HpaII | CCGG | 3 cut(s) | 74, 677, 3384 |
| Hpy166II | GTNNAC | 6 cut(s) | 1594, 1900, 2026, 2365, 2387, 3024 |
| Hpy8I | GTNNAC | 6 cut(s) | 1594, 1900, 2026, 2365, 2387, 3024 |
| Hpy99I | CGWCG | 1 cut(s) | 2718 |
| HpyCH4III | ACNGT | 9 cut(s) | 142, 976, 1431, 1690, 2009, 2199, 2391, 3301, 3334 |
| HpyCH4IV | ACGT | 6 cut(s) | 806, 1249, 1267, 1964, 2688, 2974 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 32, 673, 787, 2090, 2093, 2099, 2178, 3436 |
| HpySE526I | ACGT | 6 cut(s) | 806, 1249, 1267, 1964, 2688, 2974 |
| Hsp92I | GRCGYC | 1 cut(s) | 24 |
| HspAI | GCGC | 5 cut(s) | 120, 667, 2462, 2556, 2781 |
| Ksp22I | TGATCA | 2 cut(s) | 2274, 2449 |
| LmnI | GCTCC | 8 cut(s) | 40, 265, 679, 778, 3256, 3340, 3386, 3427 |
| LweI | GCATC | 9 cut(s) | 599, 751, 1041, 1657, 1991, 2386, 2407, 2831, 3218 |
| MaeI | CTAG | 5 cut(s) | 596, 606, 1130, 1661, 2640 |
| MaeII | ACGT | 6 cut(s) | 806, 1249, 1267, 1964, 2688, 2974 |
| MaeIII | GTNAC | 6 cut(s) | 614, 1109, 1363, 2204, 2292, 2911 |
| MfeI | CAATTG | 1 cut(s) | 1698 |
| MflI | RGATCY | 3 cut(s) | 1231, 3037, 3229 |
| MlsI | TGGCCA | 1 cut(s) | 3288 |
| MluNI | TGGCCA | 1 cut(s) | 3288 |
| MlyI | GAGTC | 8 cut(s) | 244, 341, 356, 376, 391, 458, 1883, 3056 |
| MmeI | TCCRAC | 5 cut(s) | 58, 315, 1652, 2373, 2561 |
| Mox20I | TGGCCA | 1 cut(s) | 3288 |
| MroXI | GAANNNNTTC | 7 cut(s) | 186, 225, 297, 468, 1598, 1885, 2976 |
| MscI | TGGCCA | 1 cut(s) | 3288 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1563, 1905, 2484 |
| Msp20I | TGGCCA | 1 cut(s) | 3288 |
| MspCI | CTTAAG | 1 cut(s) | 146 |
| MspI | CCGG | 3 cut(s) | 74, 677, 3384 |
| MspR9I | CCNGG | 5 cut(s) | 117, 290, 425, 692, 2909 |
| MunI | CAATTG | 1 cut(s) | 1698 |
| Mva1269I | GAATGC | 1 cut(s) | 3351 |
| MvaI | CCWGG | 5 cut(s) | 117, 290, 425, 692, 2909 |
| MvnI | CGCG | 4 cut(s) | 122, 192, 579, 667 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 32, 673, 787, 2090, 2093, 2099, 2178, 3436 |
| NcoI | CCATGG | 1 cut(s) | 957 |
| NdeI | CATATG | 2 cut(s) | 2242, 2741 |
| NmeAIII | GCCGAG | 2 cut(s) | 390, 1919 |
| NmuCI | GTSAC | 3 cut(s) | 614, 1109, 2292 |
| NsbI | TGCGCA | 1 cut(s) | 2782 |
| NspI | RCATGY | 3 cut(s) | 35, 1449, 2192 |
| NspV | TTCGAA | 3 cut(s) | 54, 520, 830 |
| OliI | CACNNNNGTG | 1 cut(s) | 1905 |
| PagI | TCATGA | 1 cut(s) | 2644 |
| PceI | AGGCCT | 1 cut(s) | 440 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3135 |
| PctI | GAATGC | 1 cut(s) | 3351 |
| PdmI | GAANNNNTTC | 7 cut(s) | 186, 225, 297, 468, 1598, 1885, 2976 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 963, 2834 |
| PleI | GAGTC | 8 cut(s) | 244, 340, 355, 375, 390, 457, 1882, 3055 |
| PpsI | GAGTC | 8 cut(s) | 244, 340, 355, 375, 390, 457, 1882, 3055 |
| PshAI | GACNNNNGTC | 1 cut(s) | 254 |
| PshBI | ATTAAT | 2 cut(s) | 1149, 2228 |
| PsiI | TTATAA | 2 cut(s) | 1989, 3224 |
| Psp124BI | GAGCTC | 3 cut(s) | 1860, 3391, 3432 |
| Psp6I | CCWGG | 5 cut(s) | 115, 288, 423, 690, 2907 |
| PspEI | GGTNACC | 2 cut(s) | 1109, 2911 |
| PspFI | CCCAGC | 2 cut(s) | 562, 1545 |
| PspGI | CCWGG | 5 cut(s) | 115, 288, 423, 690, 2907 |
| PspPI | GGNCC | 4 cut(s) | 397, 566, 674, 2340 |
| PstI | CTGCAG | 1 cut(s) | 3208 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1877, 2834, 2993 |
| PsuI | RGATCY | 3 cut(s) | 1231, 3037, 3229 |
| RsaI | GTAC | 4 cut(s) | 1438, 1744, 1913, 2769 |
| RsaNI | GTAC | 4 cut(s) | 1437, 1743, 1912, 2768 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1563, 1905, 2484 |
| SacI | GAGCTC | 3 cut(s) | 1860, 3391, 3432 |
| SalI | GTCGAC | 1 cut(s) | 2363 |
| Sau96I | GGNCC | 4 cut(s) | 397, 566, 674, 2340 |
| ScaI | AGTACT | 1 cut(s) | 1438 |
| SchI | GAGTC | 8 cut(s) | 244, 341, 356, 376, 391, 458, 1883, 3056 |
| ScrFI | CCNGG | 5 cut(s) | 117, 290, 425, 692, 2909 |
| SfaNI | GCATC | 9 cut(s) | 599, 751, 1041, 1657, 1991, 2386, 2407, 2831, 3218 |
| SfcI | CTRYAG | 3 cut(s) | 2167, 3204, 3249 |
| SfuI | TTCGAA | 3 cut(s) | 54, 520, 830 |
| SinI | GGWCC | 1 cut(s) | 397 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1563, 1905, 2484 |
| SmlI | CTYRAG | 5 cut(s) | 146, 889, 2498, 2679, 2812 |
| SmoI | CTYRAG | 5 cut(s) | 146, 889, 2498, 2679, 2812 |
| SseBI | AGGCCT | 1 cut(s) | 440 |
| SsiI | CCGC | 8 cut(s) | 106, 122, 192, 344, 612, 630, 983, 2603 |
| SspMI | CTAG | 5 cut(s) | 596, 606, 1130, 1661, 2640 |
| SstI | GAGCTC | 3 cut(s) | 1860, 3391, 3432 |
| StuI | AGGCCT | 1 cut(s) | 440 |
| StyD4I | CCNGG | 5 cut(s) | 115, 288, 423, 690, 2907 |
| StyI | CCWWGG | 3 cut(s) | 957, 1799, 2943 |
| TaaI | ACNGT | 9 cut(s) | 142, 976, 1431, 1690, 2009, 2199, 2391, 3301, 3334 |
| TaiI | ACGT | 6 cut(s) | 809, 1252, 1270, 1967, 2691, 2977 |
| TaqII | GACCGA | 2 cut(s) | 194, 2973 |
| TatI | WGTACW | 2 cut(s) | 1436, 2767 |
| TauI | GCSGC | 1 cut(s) | 632 |
| TscAI | CASTG | 8 cut(s) | 820, 1296, 1850, 1927, 2528, 2878, 3026, 3400 |
| TseFI | GTSAC | 3 cut(s) | 614, 1109, 2292 |
| Tsp45I | GTSAC | 3 cut(s) | 614, 1109, 2292 |
| TspDTI | ATGAA | 7 cut(s) | 854, 1146, 1368, 1526, 2064, 3071, 3266 |
| TspGWI | ACGGA | 4 cut(s) | 185, 1118, 2702, 3222 |
| TspRI | CASTG | 8 cut(s) | 820, 1296, 1850, 1927, 2528, 2878, 3026, 3400 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 963, 2834 |
| Vha464I | CTTAAG | 1 cut(s) | 146 |
| VpaK11BI | GGWCC | 1 cut(s) | 397 |
| VspI | ATTAAT | 2 cut(s) | 1149, 2228 |
| XceI | RCATGY | 3 cut(s) | 35, 1449, 2192 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 421, 1874 |
| XmiI | GTMKAC | 1 cut(s) | 2364 |
| XmnI | GAANNNNTTC | 7 cut(s) | 186, 225, 297, 468, 1598, 1885, 2976 |
| XspI | CTAG | 5 cut(s) | 596, 606, 1130, 1661, 2640 |
| ZrmI | AGTACT | 1 cut(s) | 1438 |