Prupe.1G034800_v2.0.a1

SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
2436594 .. 2443236
6643 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G034800.1

Sequence Viewer

Length: 3651 bp
ATGATAGAAGACATGGACACCAGAAACGGCGCAGAGGAAGAGAAAGTCTCATCAGTTGAAATGCCCAAATTTTATATTCTCCCAGAGATCTCGCAATGCGGTGAGGCCAACAACTCCAACTTTGAAATTCCTACGGCGGTGATTGTTAAGCGAACCAATACGAGCACTGGGGCTCGTATTTCTGCCCCGATCAATCAAGAGGGCTCCAAGGCTGCAGATGAAGCCGAAGCTCAGAGATTAGTGAAGGAAGAAGTTCCTGATAGTCAAGAGGGTTTGGTAACTTTGGCTCAACTGCCGGATCCTACTTCCACCCATATCAAGCAAGAGAGCTCCGAGAAGTCAGATAGGGCTGAAACTCTTTCTGGGTTGAACCCTCCAAGCTTGGTTAAGATTGAGGTTCCTGATAGCCAGGAGGGTTTGATTCAGCAGGCAAAACCTGTTCCAATTCGGGTCAAGCAAGAGCCCTTTGTGGAGTCAGATGAGGCCAATCCTCTAAGCTTAGTACCGAGTCAGGTTCCTGATAGTCAAGAGGGTTTGGTCCTACGAGTGGAACCCATTACGACCCTGGTTAAGCTGGAGGCCTCTGAGGAGGCAGATGAAGCCGAAAAGCTTCATGGGTCTAAGCCTGAGCGCCCAGAAAAGAAGGAAGTTCCTGATCAGCAAGAGGGTCTGACCCAACAGGAAGAGAATGTCAAGAAAATCCGAGCAGTTGTGGGGTCTGAAATATCTGAACTTTTAATTCAACTAGTACTCTCTCGATGCGGTGACAACCCAGATGCAGCCATCAATTACATCCTTGAAGGTCAGGGGATATCGGTTAAGCCGACAAATACGAGCACAGGAGCTTGTATCTCAACCCAGTTGCCCGATTCGCATAAGGGATCGAAGCCTAATAGCCAGGTAAAGAAGGAAGATCCTGATTGTCAAGTAACTTTAGTTCAACAGACGAGGCCTAAAAATTTGGAGGATGGAGACTTCCCCACAGAGCAGGATTGGCTTTTGGTGGGAAGGACATTTGTCACTGCACTTTCTACTTCCAAAGGCAGGAAATTGTTTGATAATGAGATTGTTCATTTCTCTTTTCCTTCCGCAAACTCCAGCCACAAAACCAGATGGATTGTTCGTTTCTCAACCAAGCAATTTGGAGAGATTGGTCGGCTTCCCATGGAATGGGCAAAGTGTGTTATTCCGCTTGTAAATTCTGGTAAAGTTAAACTTCGCGGGCGTTGTATAGCTGCACCGAAAGTCCTTTCTATGATGCAAGAGGTCATATTGTATGTAAGTTTTTATATTCACCACTCAATTTTCACGGAGGGTGACCACTCGTCGTGGAGGCTAGATGTATCCCCCAACATTGATTCTTCAATTTATCCTCTCCTCAGTCAGTTCAAATTGCTGAAAATTCAGCCATATAAGAAGGCTGAATTCACCCCAGAAGAACTTGATTCCCGGAAACGCCTTTTGAATATTGAACGTATTCCAGATGACGGTGCTCCTGTGTTGCCCTTAGTGAAACGAAGAAAGGGTTGCCAACAGCCTTCAGAAGAAAGCAGAGATGAACAAGCCATTACAGAGTCATCTCTAAATAAGATTGTTGGTGCAGCAGATGTTTATGACTTGGAGGAGATGGAACCCCCGAGTACTCTCACGTGTGTTCTGAAACCATACCAGAAACAAGCTCTCTACTGGATGTCTGAATTAGAGAAGGGAATTGATGTTGAGAAGGCAACACAAACTCTTCATCCTTGCTGGGCGGCCTATCATATGTGTGATGAGAGGGTTTCTTCAGTCTATGTGAACATCTTCACGGGAGAGGCAACCACAAAATTTCCAACTGCAACACAGATGGCAAGAGGAGGAATCCTAGCAGATGCAATGGGACTTGGGAAGACTGTGATGACAATTGCTCTAATACTTGCAAGACCAGGCAGAAGCTCTAATAGTATTGAAATTGCAAAGAGGAGGAGGATAGATTCAGATACAAGCACCCCATTTAAACCAAGGGGAGGCACTCTTGTTGTCTGTCCCATGTCTTTGTTAAGCCAGTGGAAGGATGAGCTTGAAACCCATTCAGAGTCGGAAAGCATTTCCATTTTTGTTCACTATGGTGGATACAGATCCACTGACCCCAAGGTGATATCAGTACAAGATGTAGTCTTGACAACATATGGTGTCTTGTCTACATCTTATAAAAGTGATGGGGAGAACAGCATTTTCCACCAGATCGACTGGTATAGGGTGGTGCTTGATGAAGCACATAGCATTAAATCTTCAAAGACCCAAGTTGCTCAGGCTGCTTTTGCCTTGTCCTCCCATTGTCGATGGTGTTTGACAGGAACGCCTATTCAGAATAATTTGGAAGACCTCTACAGCCTCTTATGCTTCTTGCATGTTGAACCATGGTGCAACTGGGCATGGTGGAGTAAATTAATTCAACGACCTTATGAGAGTGGTGACCCTAGAGGACTGAGATTGATAAAGGCTATTTTGAGGTCATTAATGTTAAGAAGAACAAAGGAGACAAAGGATAAAAAAGGAAGGCCCATACTTGTTCTCCCTCCAACTGACATTCAAACCATTGAGTGTGAACAGTCAGAAGCTGAACGCTACTTTTATGATGCCCTTTTTAGGAGATCAAAAGTCCAGTTTGATCAGTTTGTGGCACAAGGCAAGGTTCTTCACAACTATGCAAATATCCTTGAGCTACTACTCCGATTGAGGCAGTGTTGCAACCACCCATATCTTGTGATGAGTAGCGCTGATTCACAAAAGATAAAAAGTGGGAGTGATCCCAAAAAGTTTGCAGACTTGGACGAGCTTGCTAGAAGATTCCTTGAAGCTAATCGTGATGCTTCCACTTCAAAGCAGATTGTCCCCACCCAAGCCTATGTTGAAGAGGTTGTTGAGAGTATACGTCGGGGTGAAAACAAAGAGTGTCCCATATGCTTGGAGCTTGCAGATGATCCTGTACTTACACCATGCGCGCATAAGATGTGCAGGGAGTGTCTTCTCTCAAGCTGGCAGACACCAGCTACTGGTCGATGTCCAATATGTCGGCAATGGCTCAAATACACTGACCTTATAGCCTGCCCATCAGAAAGCCGTTTCCAGGCTAATACTGAGGGAAATTGGACGGAATCTTCAAAGGTTTTAAAGCTCTTGGATTGCTTGGAACATATCCTTCGGTCAGATTCTGGTGCAAAGAGCATTGTTTTCAGTCAGTGGACTGCATTTTTGGATCTCTTGGAGACCCCTATGAAGAAAAGAGGAATTGGGTTTCTGAGGTTTGATGGAAAGCTGTCCCAGACACAGAGAGAAAGAGTATTGAACGAGTTCAATGAGACCAGGCAGAAAATGGTGTTGTTGACGTCTTTGAAAACTGGTGGTGTTGGTCTAAATTTAACTGCAGCATCTAATGTCTTTATAATGGATCCATGGTGGAATCCAGCGGTTGAGGAGCAAGCAATAATGAGAATTCATCGCATTGGACAAAAGCGAACTGTTGTTGTTAGAAGATTTATTGTCAAGGACTCAGTGGAGGAACGCATGCAACAAGTTCAGGCCAGGAAGCAAAAAATGATTGCTGGAGCTCTCACTGATGAGGAAGTAAGATCTGCCAGAATTGAGGAGCTCAAAATGCTTTTCACATAG

Protein Analysis

1217

Amino Acids

136.88

Weight (kDa)

6.14

Isoelectric Point (pI)

51.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2190, 3425
AatII GACGTC 1 cut(s) 3371
AccB7I CCANNNNNTGG 2 cut(s) 1170, 3035
AccI GTMKAC 2 cut(s) 2180, 2911
AccII CGCG 2 cut(s) 1221, 2984
AciI CCGC 8 cut(s) 99, 137, 762, 1089, 1190, 1221, 1754, 3449
AcsI RAATTY 9 cut(s) 68, 126, 958, 1198, 1401, 1424, 1826, 3397, 3474
AcuI CTGAAG 2 cut(s) 1524, 1770
AcvI CACGTG 1 cut(s) 1650
AcyI GRCGYC 1 cut(s) 3368
AfaI GTAC 5 cut(s) 504, 750, 1642, 2145, 2970
AfeI AGCGCT 1 cut(s) 2758
AfiI CCNNNNNNNGG 9 cut(s) 547, 1044, 1170, 1487, 2006, 2050, 2628, 3035, 3109
AflIII ACRYGT 1 cut(s) 1649
AhdI GACNNNNNGTC 1 cut(s) 1324
AhlI ACTAGT 1 cut(s) 745
AjnI CCWGG 7 cut(s) 408, 564, 897, 1924, 3108, 3344, 3563
AleI CACNNNNGTG 1 cut(s) 2106
Alw21I GWGCWC 6 cut(s) 167, 332, 839, 1495, 3592, 3633
Alw26I GTCTC 5 cut(s) 52, 966, 2513, 3242, 3335
AlwNI CAGNNNCTG 3 cut(s) 2600, 3035, 3194
Ama87I CYCGRG 1 cut(s) 1636
Aor51HI AGCGCT 1 cut(s) 2758
AoxI GGCC 7 cut(s) 105, 483, 579, 950, 1755, 2540, 3561
ApeKI GCWGC 6 cut(s) 212, 779, 1235, 1601, 2294, 3407
ApoI RAATTY 9 cut(s) 68, 126, 958, 1198, 1401, 1424, 1826, 3397, 3474
ArsI GACNNNNNNTTYG 2 cut(s) 3217, 3249
AseI ATTAAT 2 cut(s) 2429, 2498
Asp700I GAANNNNTTC 5 cut(s) 252, 609, 1476, 1802, 3332
AspLEI GCGC 5 cut(s) 32, 633, 2759, 2984, 2986
AspS9I GGNCC 2 cut(s) 538, 2541
AsuC2I CCSGG 1 cut(s) 1450
AsuHPI GGTGA 9 cut(s) 113, 151, 776, 1286, 1328, 1420, 2146, 2465, 2933
AvaI CYCGRG 1 cut(s) 1636
AvaII GGWCC 1 cut(s) 538
BamHI GGATCC 2 cut(s) 298, 3430
BanII GRGCYC 6 cut(s) 175, 206, 332, 465, 3592, 3633
BbrPI CACGTG 1 cut(s) 1650
BbsI GAAGAC 4 cut(s) 15, 1895, 2367, 2999
Bbv12I GWGCWC 6 cut(s) 167, 332, 839, 1495, 3592, 3633
BbvI GCAGC 6 cut(s) 199, 791, 1222, 1613, 2281, 3419
BccI CCATC 9 cut(s) 791, 962, 1107, 1621, 1840, 2192, 2316, 3100, 3284
BceAI ACGGC 3 cut(s) 43, 150, 3087
BciT130I CCWGG 7 cut(s) 410, 566, 899, 1926, 3110, 3346, 3565
BciVI GTATCC 2 cut(s) 1354, 2105
BclI TGATCA 2 cut(s) 655, 2650
BcnI CCSGG 1 cut(s) 1450
BcoDI GTCTC 5 cut(s) 52, 966, 2513, 3242, 3335
BcuI ACTAGT 1 cut(s) 745
BfaI CTAG 5 cut(s) 746, 1337, 1865, 2460, 2823
BfmI CTRYAG 3 cut(s) 213, 2368, 3405
BfoI RGCGCY 2 cut(s) 634, 2760
BfuI GTATCC 2 cut(s) 1354, 2105
BglII AGATCT 2 cut(s) 87, 3611
BisI GCNGC 7 cut(s) 213, 780, 1236, 1602, 1755, 2295, 3408
BlsI GCNGC 7 cut(s) 214, 781, 1237, 1603, 1756, 2296, 3409
BmcAI AGTACT 2 cut(s) 750, 1642
Bme1390I CCNGG 8 cut(s) 410, 566, 899, 1450, 1926, 3110, 3346, 3565
Bme18I GGWCC 1 cut(s) 538
BmeRI GACNNNNNGTC 1 cut(s) 1324
BmeT110I CYCGRG 1 cut(s) 1636
BmgT120I GGNCC 2 cut(s) 538, 2541
BmiI GGNNCC 7 cut(s) 205, 300, 399, 516, 552, 1632, 3432
BmrFI CCNGG 8 cut(s) 410, 566, 899, 1450, 1926, 3110, 3346, 3565
BmrI ACTGGG 3 cut(s) 177, 853, 2419
BmsI GCATC 7 cut(s) 749, 766, 1248, 1861, 2608, 2839, 3419
BmuI ACTGGG 3 cut(s) 177, 853, 2419
BoxI GACNNNNGTC 1 cut(s) 1016
BpiI GAAGAC 4 cut(s) 15, 1895, 2367, 2999
BplI GAGNNNNNCTC 2 cut(s) 32, 64
BpmI CTGGAG 3 cut(s) 596, 1081, 3606
Bpu10I CCTNAGC 2 cut(s) 627, 2289
BpuEI CTTGAG 2 cut(s) 2720, 2998
BpuMI CCSGG 1 cut(s) 1450
BsaAI YACGTR 1 cut(s) 1650
BsaBI GATNNNNATC 1 cut(s) 2116
BsaHI GRCGYC 1 cut(s) 3368
BsaI GGTCTC 2 cut(s) 3242, 3335
BsaJI CCNNGG 7 cut(s) 207, 564, 1164, 2000, 2130, 2399, 3434
BsaXI ACNNNNNCTCC 2 cut(s) 2538, 2568
Bsc4I CCNNNNNNNGG 9 cut(s) 547, 1044, 1170, 1487, 2006, 2050, 2628, 3035, 3109
Bse1I ACTGG 9 cut(s) 172, 859, 1691, 2044, 2234, 2414, 2644, 3040, 3385
Bse3DI GCAATG 3 cut(s) 101, 1881, 3065
Bse8I GATNNNNATC 1 cut(s) 2116
BseBI CCWGG 7 cut(s) 410, 566, 899, 1926, 3110, 3346, 3565
BseDI CCNNGG 7 cut(s) 207, 564, 1164, 2000, 2130, 2399, 3434
BseGI GGATG 5 cut(s) 792, 973, 1695, 1741, 2059
BseJI GATNNNNATC 1 cut(s) 2116
BseLI CCNNNNNNNGG 9 cut(s) 547, 1044, 1170, 1487, 2006, 2050, 2628, 3035, 3109
BseMI GCAATG 3 cut(s) 101, 1881, 3065
BseMII CTCAG 9 cut(s) 245, 576, 618, 1393, 2303, 2459, 3111, 3272, 3546
BseNI ACTGG 9 cut(s) 172, 859, 1691, 2044, 2234, 2414, 2644, 3040, 3385
BsePI GCGCGC 1 cut(s) 2982
BseRI GAGGAG 8 cut(s) 602, 1367, 1637, 1869, 1975, 1978, 3470, 3641
BseXI GCAGC 6 cut(s) 199, 791, 1222, 1613, 2281, 3419
BseYI CCCAGC 1 cut(s) 1749
BsgI GTGCAG 4 cut(s) 1008, 1221, 1620, 3016
Bsh1236I CGCG 2 cut(s) 1221, 2984
BshFI GGCC 7 cut(s) 107, 485, 581, 952, 1757, 2542, 3563
BsiHKAI GWGCWC 6 cut(s) 167, 332, 839, 1495, 3592, 3633
BsiHKCI CYCGRG 1 cut(s) 1636
BsiSI CCGG 2 cut(s) 296, 1450
BslFI GGGAC 5 cut(s) 1893, 2010, 2858, 2922, 3286
BslI CCNNNNNNNGG 9 cut(s) 547, 1044, 1170, 1487, 2006, 2050, 2628, 3035, 3109
BsmAI GTCTC 5 cut(s) 52, 966, 2513, 3242, 3335
BsmFI GGGAC 5 cut(s) 1893, 2010, 2858, 2922, 3286
BsnI GGCC 7 cut(s) 107, 485, 581, 952, 1757, 2542, 3563
Bso31I GGTCTC 2 cut(s) 3242, 3335
BsoBI CYCGRG 1 cut(s) 1636
Bsp1286I GDGCHC 9 cut(s) 167, 175, 206, 332, 465, 839, 1495, 3592, 3633
Bsp19I CCATGG 3 cut(s) 1164, 2399, 3434
BspACI CCGC 8 cut(s) 99, 137, 762, 1089, 1190, 1221, 1754, 3449
BspANI GGCC 7 cut(s) 107, 485, 581, 952, 1757, 2542, 3563
BspCNI CTCAG 9 cut(s) 244, 577, 619, 1392, 2302, 2460, 3112, 3273, 3545
BspFNI CGCG 2 cut(s) 1221, 2984
BspLI GGNNCC 7 cut(s) 205, 300, 399, 516, 552, 1632, 3432
BspMAI CTGCAG 2 cut(s) 217, 3409
BspTNI GGTCTC 2 cut(s) 3242, 3335
BsrDI GCAATG 3 cut(s) 101, 1881, 3065
BsrI ACTGG 9 cut(s) 172, 859, 1691, 2044, 2234, 2414, 2644, 3040, 3385
BssECI CCNNGG 7 cut(s) 207, 564, 1164, 2000, 2130, 2399, 3434
BssHII GCGCGC 1 cut(s) 2982
BssNAI GTATAC 1 cut(s) 2912
BssNI GRCGYC 1 cut(s) 3368
BssT1I CCWWGG 6 cut(s) 207, 1164, 2000, 2130, 2399, 3434
Bst1107I GTATAC 1 cut(s) 2912
Bst2UI CCWGG 7 cut(s) 410, 566, 899, 1926, 3110, 3346, 3565
Bst4CI ACNGT 4 cut(s) 1490, 1894, 2592, 3502
Bst6I CTCTTC 4 cut(s) 33, 678, 1743, 2889
BstACI GRCGYC 1 cut(s) 3368
BstBAI YACGTR 1 cut(s) 1650
BstC8I GCNNGC 9 cut(s) 429, 1223, 2820, 2955, 2984, 3020, 3088, 3462, 3548
BstDSI CCRYGG 3 cut(s) 1164, 2399, 3434
BstEII GGTNACC 2 cut(s) 1316, 2453
BstF5I GGATG 5 cut(s) 792, 973, 1695, 1741, 2059
BstFNI CGCG 2 cut(s) 1221, 2984
BstH2I RGCGCY 2 cut(s) 634, 2760
BstHHI GCGC 5 cut(s) 32, 633, 2759, 2984, 2986
BstMAI GTCTC 5 cut(s) 52, 966, 2513, 3242, 3335
BstMWI GCNNNNNNNGC 8 cut(s) 221, 599, 871, 994, 2294, 2300, 2379, 3637
BstNI CCWGG 7 cut(s) 410, 566, 899, 1926, 3110, 3346, 3565
BstNSI RCATGY 2 cut(s) 2393, 3550
BstPAI GACNNNNGTC 1 cut(s) 1016
BstPI GGTNACC 2 cut(s) 1316, 2453
BstSCI CCNGG 8 cut(s) 408, 564, 897, 1448, 1924, 3108, 3344, 3563
BstSFI CTRYAG 3 cut(s) 213, 2368, 3405
BstUI CGCG 2 cut(s) 1221, 2984
BstV1I GCAGC 6 cut(s) 199, 791, 1222, 1613, 2281, 3419
BstV2I GAAGAC 4 cut(s) 15, 1895, 2367, 2999
BstX2I RGATCY 7 cut(s) 87, 298, 913, 2117, 3238, 3430, 3611
BstXI CCANNNNNNTGG 1 cut(s) 2947
BstYI RGATCY 7 cut(s) 87, 298, 913, 2117, 3238, 3430, 3611
BstZ17I GTATAC 1 cut(s) 2912
BsuI GTATCC 2 cut(s) 1354, 2105
BsuRI GGCC 7 cut(s) 107, 485, 581, 952, 1757, 2542, 3563
BtgI CCRYGG 3 cut(s) 1164, 2399, 3434
BtgZI GCGATG 1 cut(s) 3464
BtsCI GGATG 5 cut(s) 792, 973, 1695, 1741, 2059
BtsI GCAGTG 2 cut(s) 1020, 2729
BtsIMutI CAGTG 9 cut(s) 165, 1020, 2051, 2121, 2729, 3072, 3227, 3540, 3594
Cac8I GCNNGC 9 cut(s) 429, 1223, 2820, 2955, 2984, 3020, 3088, 3462, 3548
CaiI CAGNNNCTG 3 cut(s) 2600, 3035, 3194
CfoI GCGC 5 cut(s) 32, 633, 2759, 2984, 2986
Cfr13I GGNCC 2 cut(s) 538, 2541
Csp6I GTAC 5 cut(s) 503, 749, 1641, 2144, 2969
CviQI GTAC 5 cut(s) 503, 749, 1641, 2144, 2969
DraI TTTAAA 2 cut(s) 1996, 3153
DriI GACNNNNNGTC 1 cut(s) 1324
Eam1104I CTCTTC 4 cut(s) 33, 678, 1743, 2889
Eam1105I GACNNNNNGTC 1 cut(s) 1324
EarI CTCTTC 4 cut(s) 33, 678, 1743, 2889
Ecl136II GAGCTC 3 cut(s) 330, 3590, 3631
Eco130I CCWWGG 6 cut(s) 207, 1164, 2000, 2130, 2399, 3434
Eco147I AGGCCT 2 cut(s) 581, 952
Eco24I GRGCYC 6 cut(s) 175, 206, 332, 465, 3592, 3633
Eco31I GGTCTC 2 cut(s) 3242, 3335
Eco32I GATATC 2 cut(s) 813, 2139
Eco47I GGWCC 1 cut(s) 538
Eco47III AGCGCT 1 cut(s) 2758
Eco53kI GAGCTC 3 cut(s) 330, 3590, 3631
Eco57I CTGAAG 2 cut(s) 1524, 1770
Eco72I CACGTG 1 cut(s) 1650
Eco88I CYCGRG 1 cut(s) 1636
Eco91I GGTNACC 2 cut(s) 1316, 2453
EcoICRI GAGCTC 3 cut(s) 330, 3590, 3631
EcoO65I GGTNACC 2 cut(s) 1316, 2453
EcoRI GAATTC 2 cut(s) 1424, 3474
EcoRII CCWGG 7 cut(s) 408, 564, 897, 1924, 3108, 3344, 3563
EcoRV GATATC 2 cut(s) 813, 2139
EcoT14I CCWWGG 6 cut(s) 207, 1164, 2000, 2130, 2399, 3434
EcoT38I GRGCYC 6 cut(s) 175, 206, 332, 465, 3592, 3633
ErhI CCWWGG 6 cut(s) 207, 1164, 2000, 2130, 2399, 3434
FalI AAGNNNNNCTT 2 cut(s) 1200, 1232
FaqI GGGAC 5 cut(s) 1893, 2010, 2858, 2922, 3286
FauI CCCGC 1 cut(s) 1214
FauNDI CATATG 3 cut(s) 1764, 2167, 2942
FbaI TGATCA 2 cut(s) 655, 2650
FblI GTMKAC 2 cut(s) 2180, 2911
Fnu4HI GCNGC 7 cut(s) 213, 780, 1236, 1602, 1755, 2295, 3408
FokI GGATG 5 cut(s) 779, 980, 1702, 1728, 2066
FriOI GRGCYC 6 cut(s) 175, 206, 332, 465, 3592, 3633
Fsp4HI GCNGC 7 cut(s) 213, 780, 1236, 1602, 1755, 2295, 3408
FspBI CTAG 5 cut(s) 746, 1337, 1865, 2460, 2823
GlaI GCGC 5 cut(s) 31, 632, 2758, 2983, 2985
GluI GCNGC 7 cut(s) 213, 780, 1236, 1602, 1755, 2295, 3408
GsaI CCCAGC 1 cut(s) 1753
GsuI CTGGAG 3 cut(s) 596, 1081, 3606
HaeII RGCGCY 2 cut(s) 634, 2760
HaeIII GGCC 7 cut(s) 107, 485, 581, 952, 1757, 2542, 3563
HapII CCGG 2 cut(s) 296, 1450
HhaI GCGC 5 cut(s) 32, 633, 2759, 2984, 2986
Hin1I GRCGYC 1 cut(s) 3368
Hin6I GCGC 5 cut(s) 30, 631, 2757, 2982, 2984
HinP1I GCGC 5 cut(s) 30, 631, 2757, 2982, 2984
HincII GTYRAC 1 cut(s) 3366
HindII GTYRAC 1 cut(s) 3366
HindIII AAGCTT 3 cut(s) 379, 496, 608
HpaII CCGG 2 cut(s) 296, 1450
HphI GGTGA 9 cut(s) 113, 151, 776, 1286, 1328, 1420, 2146, 2465, 2933
Hpy166II GTNNAC 7 cut(s) 1798, 2101, 2181, 2588, 2912, 3225, 3366
Hpy8I GTNNAC 7 cut(s) 1798, 2101, 2181, 2588, 2912, 3225, 3366
Hpy99I CGWCG 2 cut(s) 1330, 2919
HpyCH4III ACNGT 4 cut(s) 1490, 1894, 2592, 3502
HpyCH4IV ACGT 4 cut(s) 1474, 1649, 2914, 3368
HpyF10VI GCNNNNNNNGC 8 cut(s) 221, 599, 871, 994, 2294, 2300, 2379, 3637
HpySE526I ACGT 4 cut(s) 1474, 1649, 2914, 3368
Hsp92I GRCGYC 1 cut(s) 3368
HspAI GCGC 5 cut(s) 30, 631, 2757, 2982, 2984
Ksp22I TGATCA 2 cut(s) 655, 2650
LmnI GCTCC 8 cut(s) 209, 335, 842, 1498, 2950, 3457, 3587, 3628
Lsp1109I GCAGC 6 cut(s) 199, 791, 1222, 1613, 2281, 3419
LweI GCATC 7 cut(s) 749, 766, 1248, 1861, 2608, 2839, 3419
MaeI CTAG 5 cut(s) 746, 1337, 1865, 2460, 2823
MaeII ACGT 4 cut(s) 1474, 1649, 2914, 3368
MaeIII GTNAC 6 cut(s) 277, 764, 928, 1018, 1316, 2453
MfeI CAATTG 1 cut(s) 1902
MflI RGATCY 7 cut(s) 87, 298, 913, 2117, 3238, 3430, 3611
MhlI GDGCHC 9 cut(s) 167, 175, 206, 332, 465, 839, 1495, 3592, 3633
MlyI GAGTC 5 cut(s) 482, 517, 1583, 2084, 3524
MmeI TCCRAC 4 cut(s) 141, 1856, 2058, 2585
MroXI GAANNNNTTC 5 cut(s) 252, 609, 1476, 1802, 3332
MslI CAYNNNNRTG 3 cut(s) 1767, 2106, 2685
MspA1I CMGCKG 1 cut(s) 3449
MspI CCGG 2 cut(s) 296, 1450
MspR9I CCNGG 8 cut(s) 410, 566, 899, 1450, 1926, 3110, 3346, 3565
MunI CAATTG 1 cut(s) 1902
MvaI CCWGG 7 cut(s) 410, 566, 899, 1926, 3110, 3346, 3565
MvnI CGCG 2 cut(s) 1221, 2984
MwoI GCNNNNNNNGC 8 cut(s) 221, 599, 871, 994, 2294, 2300, 2379, 3637
NciI CCSGG 1 cut(s) 1450
NcoI CCATGG 3 cut(s) 1164, 2399, 3434
NdeI CATATG 3 cut(s) 1764, 2167, 2942
NlaIV GGNNCC 7 cut(s) 205, 300, 399, 516, 552, 1632, 3432
NmuCI GTSAC 4 cut(s) 764, 1018, 1316, 2453
NspI RCATGY 2 cut(s) 2393, 3550
OliI CACNNNNGTG 1 cut(s) 2106
PaeI GCATGC 1 cut(s) 3550
PauI GCGCGC 1 cut(s) 2982
PceI AGGCCT 2 cut(s) 581, 952
PcsI WCGNNNNNNNCGW 1 cut(s) 821
PdmI GAANNNNTTC 5 cut(s) 252, 609, 1476, 1802, 3332
PflMI CCANNNNNTGG 2 cut(s) 1170, 3035
PfoI TCCNGGA 1 cut(s) 1448
PkrI GCNGC 7 cut(s) 214, 781, 1237, 1603, 1756, 2296, 3409
PleI GAGTC 5 cut(s) 481, 516, 1582, 2083, 3524
PmaCI CACGTG 1 cut(s) 1650
PmlI CACGTG 1 cut(s) 1650
PpsI GAGTC 5 cut(s) 481, 516, 1582, 2083, 3524
Ppu21I YACGTR 1 cut(s) 1650
PshAI GACNNNNGTC 1 cut(s) 1016
PshBI ATTAAT 2 cut(s) 2429, 2498
PsiI TTATAA 2 cut(s) 2190, 3425
Psp124BI GAGCTC 3 cut(s) 332, 3592, 3633
Psp6I CCWGG 7 cut(s) 408, 564, 897, 1924, 3108, 3344, 3563
PspCI CACGTG 1 cut(s) 1650
PspEI GGTNACC 2 cut(s) 1316, 2453
PspFI CCCAGC 1 cut(s) 1749
PspGI CCWGG 7 cut(s) 408, 564, 897, 1924, 3108, 3344, 3563
PspN4I GGNNCC 7 cut(s) 205, 300, 399, 516, 552, 1632, 3432
PspPI GGNCC 2 cut(s) 538, 2541
PsrI GAACNNNNNNTAC 2 cut(s) 921, 953
PstI CTGCAG 2 cut(s) 217, 3409
PstNI CAGNNNCTG 3 cut(s) 2600, 3035, 3194
PsuI RGATCY 7 cut(s) 87, 298, 913, 2117, 3238, 3430, 3611
PteI GCGCGC 1 cut(s) 2982
RsaI GTAC 5 cut(s) 504, 750, 1642, 2145, 2970
RsaNI GTAC 5 cut(s) 503, 749, 1641, 2144, 2969
RseI CAYNNNNRTG 3 cut(s) 1767, 2106, 2685
SacI GAGCTC 3 cut(s) 332, 3592, 3633
SatI GCNGC 7 cut(s) 213, 780, 1236, 1602, 1755, 2295, 3408
Sau96I GGNCC 2 cut(s) 538, 2541
ScaI AGTACT 2 cut(s) 750, 1642
SchI GAGTC 5 cut(s) 482, 517, 1583, 2084, 3524
ScrFI CCNGG 8 cut(s) 410, 566, 899, 1450, 1926, 3110, 3346, 3565
SduI GDGCHC 9 cut(s) 167, 175, 206, 332, 465, 839, 1495, 3592, 3633
SfaNI GCATC 7 cut(s) 749, 766, 1248, 1861, 2608, 2839, 3419
SfcI CTRYAG 3 cut(s) 213, 2368, 3405
SinI GGWCC 1 cut(s) 538
SmiMI CAYNNNNRTG 3 cut(s) 1767, 2106, 2685
SmlI CTYRAG 2 cut(s) 2699, 3013
SmoI CTYRAG 2 cut(s) 2699, 3013
SpeI ACTAGT 1 cut(s) 745
SphI GCATGC 1 cut(s) 3550
SseBI AGGCCT 2 cut(s) 581, 952
SsiI CCGC 8 cut(s) 99, 137, 762, 1089, 1190, 1221, 1754, 3449
SspI AATATT 1 cut(s) 1468
SspMI CTAG 5 cut(s) 746, 1337, 1865, 2460, 2823
SstI GAGCTC 3 cut(s) 332, 3592, 3633
StuI AGGCCT 2 cut(s) 581, 952
StyD4I CCNGG 8 cut(s) 408, 564, 897, 1448, 1924, 3108, 3344, 3563
StyI CCWWGG 6 cut(s) 207, 1164, 2000, 2130, 2399, 3434
TaaI ACNGT 4 cut(s) 1490, 1894, 2592, 3502
TaiI ACGT 4 cut(s) 1477, 1652, 2917, 3371
TaqI TCGA 5 cut(s) 757, 884, 2226, 2320, 3040
TaqII GACCGA 1 cut(s) 3174
TatI WGTACW 4 cut(s) 748, 1640, 2143, 2968
TauI GCSGC 1 cut(s) 1757
TscAI CASTG 9 cut(s) 172, 1027, 2051, 2128, 2729, 3079, 3227, 3540, 3601
TseFI GTSAC 4 cut(s) 764, 1018, 1316, 2453
TseI GCWGC 6 cut(s) 212, 779, 1235, 1601, 2294, 3407
Tsp45I GTSAC 4 cut(s) 764, 1018, 1316, 2453
TspDTI ATGAA 9 cut(s) 234, 602, 612, 1061, 1572, 1730, 2265, 3272, 3467
TspGWI ACGGA 2 cut(s) 1325, 3149
TspRI CASTG 9 cut(s) 172, 1027, 2051, 2128, 2729, 3079, 3227, 3540, 3601
Van91I CCANNNNNTGG 2 cut(s) 1170, 3035
VpaK11BI GGWCC 1 cut(s) 538
VspI ATTAAT 2 cut(s) 2429, 2498
XapI RAATTY 9 cut(s) 68, 126, 958, 1198, 1401, 1424, 1826, 3397, 3474
XceI RCATGY 2 cut(s) 2393, 3550
XcmI CCANNNNNNNNNTGG 3 cut(s) 562, 2406, 3352
XmiI GTMKAC 2 cut(s) 2180, 2911
XmnI GAANNNNTTC 5 cut(s) 252, 609, 1476, 1802, 3332
XspI CTAG 5 cut(s) 746, 1337, 1865, 2460, 2823
ZraI GACGTC 1 cut(s) 3369
ZrmI AGTACT 2 cut(s) 750, 1642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.