SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| HIRAN | PF08797 | 61 - 114 | 5.6e-08 | HIRAN domain |
| SNF2-rel_dom | PF00176 | 116 - 329 | 7.5e-36 | SNF2-related domain |
| zf-C3HC4 | PF00097 | 393 - 431 | 6.4e-08 | Zinc finger, C3HC4 type (RING finger) |
| zf-RING_UBOX | PF13445 | 393 - 430 | 9.1e-07 | RING-type zinc-finger |
| zf-C3HC4_4 | PF15227 | 393 - 426 | 9.5e-06 | zinc finger of C3HC4-type, RING |
| Helicase_C | PF00271 | 466 - 529 | 2.1e-09 | Helicase conserved C-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1481 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1277 |
| AccBSI | CCGCTC | 1 cut(s) | 1429 |
| AciI | CCGC | 6 cut(s) | 23, 92, 106, 289, 1429, 1547 |
| AclWI | GGATC | 3 cut(s) | 689, 1199, 1523 |
| AcoI | YGGCCR | 1 cut(s) | 20 |
| AcsI | RAATTY | 4 cut(s) | 262, 1507, 1572, 1692 |
| AcuI | CTGAAG | 2 cut(s) | 927, 1334 |
| AcyI | GRCGYC | 1 cut(s) | 1478 |
| AfaI | GTAC | 1 cut(s) | 1065 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 29, 119, 870, 1277, 1648 |
| AjnI | CCWGG | 1 cut(s) | 1086 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1128, 1160 |
| AleI | CACNNNNGTG | 1 cut(s) | 396 |
| Alw26I | GTCTC | 2 cut(s) | 724, 1445 |
| AlwI | GGATC | 3 cut(s) | 689, 1199, 1523 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 842, 1361 |
| AoxI | GGCC | 5 cut(s) | 20, 110, 144, 677, 720 |
| ApeKI | GCWGC | 3 cut(s) | 89, 1414, 1517 |
| ApoI | RAATTY | 4 cut(s) | 262, 1507, 1572, 1692 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1442 |
| AspLEI | GCGC | 2 cut(s) | 304, 1226 |
| AspS9I | GGNCC | 2 cut(s) | 144, 1280 |
| AsuC2I | CCSGG | 1 cut(s) | 488 |
| AsuHPI | GGTGA | 9 cut(s) | 271, 356, 473, 704, 791, 1040, 1175, 1376, 1594 |
| AvaII | GGWCC | 1 cut(s) | 1280 |
| BanII | GRGCYC | 2 cut(s) | 369, 786 |
| BauI | CACGAG | 1 cut(s) | 1275 |
| BbsI | GAAGAC | 2 cut(s) | 1241, 1273 |
| BbvI | GCAGC | 3 cut(s) | 101, 1426, 1529 |
| BccI | CCATC | 6 cut(s) | 12, 46, 458, 582, 984, 1394 |
| BciT130I | CCWGG | 1 cut(s) | 1088 |
| BciVI | GTATCC | 1 cut(s) | 1163 |
| BclI | TGATCA | 1 cut(s) | 553 |
| BcnI | CCSGG | 1 cut(s) | 488 |
| BcoDI | GTCTC | 2 cut(s) | 724, 1445 |
| BfmI | CTRYAG | 2 cut(s) | 634, 1515 |
| BfuI | GTATCC | 1 cut(s) | 1163 |
| BglII | AGATCT | 1 cut(s) | 628 |
| BisI | GCNGC | 4 cut(s) | 23, 90, 1415, 1518 |
| BlpI | GCTNAGC | 1 cut(s) | 161 |
| BlsI | GCNGC | 4 cut(s) | 24, 91, 1416, 1519 |
| Bme1390I | CCNGG | 2 cut(s) | 488, 1088 |
| Bme18I | GGWCC | 1 cut(s) | 1280 |
| BmgT120I | GGNCC | 2 cut(s) | 144, 1280 |
| BmrFI | CCNGG | 2 cut(s) | 488, 1088 |
| BmsI | GCATC | 4 cut(s) | 312, 829, 1081, 1529 |
| BpiI | GAAGAC | 2 cut(s) | 1241, 1273 |
| BpmI | CTGGAG | 1 cut(s) | 1512 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 161 |
| BpuEI | CTTGAG | 1 cut(s) | 1276 |
| BpuMI | CCSGG | 1 cut(s) | 488 |
| BsaHI | GRCGYC | 1 cut(s) | 1478 |
| BsaI | GGTCTC | 2 cut(s) | 724, 1445 |
| BsaJI | CCNNGG | 3 cut(s) | 420, 665, 1532 |
| BsaWI | WCCGGW | 1 cut(s) | 76 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 589, 619, 780, 810 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 29, 119, 870, 1277, 1648 |
| Bse1I | ACTGG | 6 cut(s) | 175, 500, 604, 680, 895, 1495 |
| Bse3DI | GCAATG | 1 cut(s) | 580 |
| BseBI | CCWGG | 1 cut(s) | 1088 |
| BseDI | CCNNGG | 3 cut(s) | 420, 665, 1532 |
| BseGI | GGATG | 4 cut(s) | 23, 42, 976, 1096 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 29, 119, 870, 1277, 1648 |
| BseMI | GCAATG | 1 cut(s) | 580 |
| BseMII | CTCAG | 1 cut(s) | 698 |
| BseNI | ACTGG | 6 cut(s) | 175, 500, 604, 680, 895, 1495 |
| BseRI | GAGGAG | 1 cut(s) | 1568 |
| BseXI | GCAGC | 3 cut(s) | 101, 1426, 1529 |
| BseYI | CCCAGC | 2 cut(s) | 1118, 1260 |
| BsgI | GTGCAG | 2 cut(s) | 68, 1258 |
| BshFI | GGCC | 5 cut(s) | 22, 112, 146, 679, 722 |
| BsiSI | CCGG | 2 cut(s) | 77, 487 |
| BslFI | GGGAC | 2 cut(s) | 1100, 1164 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 29, 119, 870, 1277, 1648 |
| BsmAI | GTCTC | 2 cut(s) | 724, 1445 |
| BsmFI | GGGAC | 2 cut(s) | 1100, 1164 |
| BsnI | GGCC | 5 cut(s) | 22, 112, 146, 679, 722 |
| Bso31I | GGTCTC | 2 cut(s) | 724, 1445 |
| Bsp1286I | GDGCHC | 2 cut(s) | 369, 786 |
| Bsp143I | GATC | 7 cut(s) | 203, 553, 628, 694, 875, 1204, 1528 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 161 |
| Bsp19I | CCATGG | 2 cut(s) | 665, 1532 |
| BspACI | CCGC | 6 cut(s) | 23, 92, 106, 289, 1429, 1547 |
| BspANI | GGCC | 5 cut(s) | 22, 112, 146, 679, 722 |
| BspCNI | CTCAG | 1 cut(s) | 699 |
| BspHI | TCATGA | 2 cut(s) | 447, 990 |
| BspMAI | CTGCAG | 1 cut(s) | 1519 |
| BspPI | GGATC | 3 cut(s) | 689, 1199, 1523 |
| BspTNI | GGTCTC | 2 cut(s) | 724, 1445 |
| BsrBI | CCGCTC | 1 cut(s) | 1429 |
| BsrDI | GCAATG | 1 cut(s) | 580 |
| BsrI | ACTGG | 6 cut(s) | 175, 500, 604, 680, 895, 1495 |
| BssECI | CCNNGG | 3 cut(s) | 420, 665, 1532 |
| BssMI | GATC | 7 cut(s) | 203, 553, 628, 694, 875, 1204, 1528 |
| BssNI | GRCGYC | 1 cut(s) | 1478 |
| BssSI | CACGAG | 1 cut(s) | 1275 |
| BssT1I | CCWWGG | 3 cut(s) | 420, 665, 1532 |
| Bst2BI | CACGAG | 1 cut(s) | 1275 |
| Bst2UI | CCWGG | 1 cut(s) | 1088 |
| Bst4CI | ACNGT | 5 cut(s) | 834, 1114, 1600, 1606, 1637 |
| Bst6I | CTCTTC | 1 cut(s) | 1131 |
| BstACI | GRCGYC | 1 cut(s) | 1478 |
| BstC8I | GCNNGC | 1 cut(s) | 1560 |
| BstDEI | CTNAG | 2 cut(s) | 161, 707 |
| BstDSI | CCRYGG | 2 cut(s) | 665, 1532 |
| BstF5I | GGATG | 4 cut(s) | 23, 42, 976, 1096 |
| BstHHI | GCGC | 2 cut(s) | 304, 1226 |
| BstKTI | GATC | 7 cut(s) | 206, 556, 631, 697, 878, 1207, 1531 |
| BstMAI | GTCTC | 2 cut(s) | 724, 1445 |
| BstMBI | GATC | 7 cut(s) | 203, 553, 628, 694, 875, 1204, 1528 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 19, 645, 1414 |
| BstNI | CCWGG | 1 cut(s) | 1088 |
| BstSCI | CCNGG | 2 cut(s) | 486, 1086 |
| BstSFI | CTRYAG | 2 cut(s) | 634, 1515 |
| BstV1I | GCAGC | 3 cut(s) | 101, 1426, 1529 |
| BstV2I | GAAGAC | 2 cut(s) | 1241, 1273 |
| BstX2I | RGATCY | 1 cut(s) | 628 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 33, 234, 1189, 1296 |
| BstYI | RGATCY | 1 cut(s) | 628 |
| BsuI | GTATCC | 1 cut(s) | 1163 |
| BsuRI | GGCC | 5 cut(s) | 22, 112, 146, 679, 722 |
| BtgI | CCRYGG | 2 cut(s) | 665, 1532 |
| BtgZI | GCGATG | 2 cut(s) | 561, 1562 |
| BtsCI | GGATG | 4 cut(s) | 23, 42, 976, 1096 |
| BtsI | GCAGTG | 1 cut(s) | 971 |
| BtsIMutI | CAGTG | 4 cut(s) | 182, 734, 971, 1394 |
| Cac8I | GCNNGC | 1 cut(s) | 1560 |
| CaiI | CAGNNNCTG | 2 cut(s) | 842, 1361 |
| CciI | TCATGA | 2 cut(s) | 447, 990 |
| CfoI | GCGC | 2 cut(s) | 304, 1226 |
| Cfr13I | GGNCC | 2 cut(s) | 144, 1280 |
| CseI | GACGC | 1 cut(s) | 1420 |
| Csp6I | GTAC | 1 cut(s) | 1064 |
| CviAII | CATG | 9 cut(s) | 85, 437, 448, 656, 666, 991, 1221, 1284, 1533 |
| CviQI | GTAC | 1 cut(s) | 1064 |
| DdeI | CTNAG | 2 cut(s) | 161, 707 |
| DpnI | GATC | 7 cut(s) | 205, 555, 630, 696, 877, 1206, 1530 |
| DpnII | GATC | 7 cut(s) | 203, 553, 628, 694, 875, 1204, 1528 |
| EaeI | YGGCCR | 1 cut(s) | 20 |
| Eam1104I | CTCTTC | 1 cut(s) | 1131 |
| EarI | CTCTTC | 1 cut(s) | 1131 |
| Eco130I | CCWWGG | 3 cut(s) | 420, 665, 1532 |
| Eco147I | AGGCCT | 1 cut(s) | 112 |
| Eco24I | GRGCYC | 2 cut(s) | 369, 786 |
| Eco31I | GGTCTC | 2 cut(s) | 724, 1445 |
| Eco32I | GATATC | 2 cut(s) | 82, 331 |
| Eco47I | GGWCC | 1 cut(s) | 1280 |
| Eco57I | CTGAAG | 2 cut(s) | 927, 1334 |
| EcoRI | GAATTC | 1 cut(s) | 1572 |
| EcoRII | CCWGG | 1 cut(s) | 1086 |
| EcoRV | GATATC | 2 cut(s) | 82, 331 |
| EcoT14I | CCWWGG | 3 cut(s) | 420, 665, 1532 |
| EcoT38I | GRGCYC | 2 cut(s) | 369, 786 |
| ErhI | CCWWGG | 3 cut(s) | 420, 665, 1532 |
| FaeI | CATG | 9 cut(s) | 88, 440, 451, 659, 669, 994, 1224, 1287, 1536 |
| FaqI | GGGAC | 2 cut(s) | 1100, 1164 |
| FatI | CATG | 9 cut(s) | 84, 436, 447, 655, 665, 990, 1220, 1283, 1532 |
| FauI | CCCGC | 1 cut(s) | 1422 |
| FauNDI | CATATG | 3 cut(s) | 457, 1129, 1184 |
| FbaI | TGATCA | 1 cut(s) | 553 |
| Fnu4HI | GCNGC | 4 cut(s) | 23, 90, 1415, 1518 |
| FokI | GGATG | 4 cut(s) | 30, 49, 963, 1103 |
| FriOI | GRGCYC | 2 cut(s) | 369, 786 |
| Fsp4HI | GCNGC | 4 cut(s) | 23, 90, 1415, 1518 |
| GlaI | GCGC | 2 cut(s) | 303, 1225 |
| GluI | GCNGC | 4 cut(s) | 23, 90, 1415, 1518 |
| GsaI | CCCAGC | 2 cut(s) | 1122, 1264 |
| GsuI | CTGGAG | 1 cut(s) | 1512 |
| HaeIII | GGCC | 5 cut(s) | 22, 112, 146, 679, 722 |
| HapII | CCGG | 2 cut(s) | 77, 487 |
| HgaI | GACGC | 1 cut(s) | 1420 |
| HhaI | GCGC | 2 cut(s) | 304, 1226 |
| Hin1I | GRCGYC | 1 cut(s) | 1478 |
| Hin1II | CATG | 9 cut(s) | 88, 440, 451, 659, 669, 994, 1224, 1287, 1536 |
| Hin6I | GCGC | 2 cut(s) | 302, 1224 |
| HinP1I | GCGC | 2 cut(s) | 302, 1224 |
| HincII | GTYRAC | 2 cut(s) | 493, 1476 |
| HindII | GTYRAC | 2 cut(s) | 493, 1476 |
| HindIII | AAGCTT | 2 cut(s) | 1058, 1703 |
| HinfI | GANTC | 4 cut(s) | 1004, 1031, 1304, 1540 |
| HpaII | CCGG | 2 cut(s) | 77, 487 |
| HphI | GGTGA | 9 cut(s) | 271, 356, 473, 704, 791, 1040, 1175, 1376, 1594 |
| Hpy166II | GTNNAC | 7 cut(s) | 391, 401, 493, 830, 886, 1392, 1476 |
| Hpy188I | TCNGA | 4 cut(s) | 132, 364, 615, 838 |
| Hpy188III | TCNNGA | 6 cut(s) | 193, 207, 448, 991, 1076, 1255 |
| Hpy8I | GTNNAC | 7 cut(s) | 391, 401, 493, 830, 886, 1392, 1476 |
| Hpy99I | CGWCG | 1 cut(s) | 199 |
| HpyAV | CCTTC | 4 cut(s) | 23, 538, 770, 902 |
| HpyCH4III | ACNGT | 5 cut(s) | 834, 1114, 1600, 1606, 1637 |
| HpyCH4IV | ACGT | 2 cut(s) | 1478, 1714 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 19, 645, 1414 |
| HpyF3I | CTNAG | 2 cut(s) | 161, 707 |
| HpySE526I | ACGT | 2 cut(s) | 1478, 1714 |
| Hsp92I | GRCGYC | 1 cut(s) | 1478 |
| Hsp92II | CATG | 9 cut(s) | 88, 440, 451, 659, 669, 994, 1224, 1287, 1536 |
| HspAI | GCGC | 2 cut(s) | 302, 1224 |
| Ksp22I | TGATCA | 1 cut(s) | 553 |
| Kzo9I | GATC | 7 cut(s) | 203, 553, 628, 694, 875, 1204, 1528 |
| LmnI | GCTCC | 4 cut(s) | 999, 1339, 1426, 1555 |
| Lsp1109I | GCAGC | 3 cut(s) | 101, 1426, 1529 |
| LweI | GCATC | 4 cut(s) | 312, 829, 1081, 1529 |
| MaeII | ACGT | 2 cut(s) | 1478, 1714 |
| MaeIII | GTNAC | 4 cut(s) | 122, 432, 1600, 1675 |
| MalI | GATC | 7 cut(s) | 205, 555, 630, 696, 877, 1206, 1530 |
| MbiI | CCGCTC | 1 cut(s) | 1429 |
| MboI | GATC | 7 cut(s) | 203, 553, 628, 694, 875, 1204, 1528 |
| MfeI | CAATTG | 1 cut(s) | 956 |
| MflI | RGATCY | 1 cut(s) | 628 |
| MhlI | GDGCHC | 2 cut(s) | 369, 786 |
| MluCI | AATT | 7 cut(s) | 262, 619, 956, 1507, 1572, 1644, 1692 |
| MmeI | TCCRAC | 2 cut(s) | 14, 827 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1442 |
| MseI | TTAA | 5 cut(s) | 276, 531, 743, 1511, 1658 |
| MslI | CAYNNNNRTG | 2 cut(s) | 396, 927 |
| MspA1I | CMGCKG | 2 cut(s) | 92, 106 |
| MspI | CCGG | 2 cut(s) | 77, 487 |
| MspR9I | CCNGG | 2 cut(s) | 488, 1088 |
| MunI | CAATTG | 1 cut(s) | 956 |
| MvaI | CCWGG | 1 cut(s) | 1088 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 19, 645, 1414 |
| NciI | CCSGG | 1 cut(s) | 488 |
| NcoI | CCATGG | 2 cut(s) | 665, 1532 |
| NdeI | CATATG | 3 cut(s) | 457, 1129, 1184 |
| NdeII | GATC | 7 cut(s) | 203, 553, 628, 694, 875, 1204, 1528 |
| NlaIII | CATG | 9 cut(s) | 88, 440, 451, 659, 669, 994, 1224, 1287, 1536 |
| NmeAIII | GCCGAG | 1 cut(s) | 1148 |
| NmuCI | GTSAC | 2 cut(s) | 122, 1600 |
| OliI | CACNNNNGTG | 1 cut(s) | 396 |
| PagI | TCATGA | 2 cut(s) | 447, 990 |
| PceI | AGGCCT | 1 cut(s) | 112 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1442 |
| PfeI | GAWTC | 4 cut(s) | 1004, 1031, 1304, 1540 |
| PflFI | GACNNNGTC | 1 cut(s) | 571 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1277 |
| PkrI | GCNGC | 4 cut(s) | 24, 91, 1416, 1519 |
| Psp6I | CCWGG | 1 cut(s) | 1086 |
| PspFI | CCCAGC | 2 cut(s) | 1118, 1260 |
| PspGI | CCWGG | 1 cut(s) | 1086 |
| PspPI | GGNCC | 2 cut(s) | 144, 1280 |
| PstI | CTGCAG | 1 cut(s) | 1519 |
| PstNI | CAGNNNCTG | 2 cut(s) | 842, 1361 |
| PsuI | RGATCY | 1 cut(s) | 628 |
| PsyI | GACNNNGTC | 1 cut(s) | 571 |
| RsaI | GTAC | 1 cut(s) | 1065 |
| RsaNI | GTAC | 1 cut(s) | 1064 |
| RseI | CAYNNNNRTG | 2 cut(s) | 396, 927 |
| SaqAI | TTAA | 5 cut(s) | 276, 531, 743, 1511, 1658 |
| SatI | GCNGC | 4 cut(s) | 23, 90, 1415, 1518 |
| Sau3AI | GATC | 7 cut(s) | 203, 553, 628, 694, 875, 1204, 1528 |
| Sau96I | GGNCC | 2 cut(s) | 144, 1280 |
| ScrFI | CCNGG | 2 cut(s) | 488, 1088 |
| SduI | GDGCHC | 2 cut(s) | 369, 786 |
| SfaNI | GCATC | 4 cut(s) | 312, 829, 1081, 1529 |
| SfcI | CTRYAG | 2 cut(s) | 634, 1515 |
| SinI | GGWCC | 1 cut(s) | 1280 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 396, 927 |
| SmlI | CTYRAG | 1 cut(s) | 1255 |
| SmoI | CTYRAG | 1 cut(s) | 1255 |
| Sse9I | AATT | 7 cut(s) | 262, 619, 956, 1507, 1572, 1644, 1692 |
| SseBI | AGGCCT | 1 cut(s) | 112 |
| SsiI | CCGC | 6 cut(s) | 23, 92, 106, 289, 1429, 1547 |
| SspI | AATATT | 1 cut(s) | 1071 |
| StuI | AGGCCT | 1 cut(s) | 112 |
| StyD4I | CCNGG | 2 cut(s) | 486, 1086 |
| StyI | CCWWGG | 3 cut(s) | 420, 665, 1532 |
| TaaI | ACNGT | 5 cut(s) | 834, 1114, 1600, 1606, 1637 |
| TaiI | ACGT | 2 cut(s) | 1481, 1717 |
| TaqI | TCGA | 4 cut(s) | 194, 1024, 1134, 1671 |
| TasI | AATT | 7 cut(s) | 262, 619, 956, 1507, 1572, 1644, 1692 |
| TauI | GCSGC | 1 cut(s) | 25 |
| TfiI | GAWTC | 4 cut(s) | 1004, 1031, 1304, 1540 |
| Tru1I | TTAA | 5 cut(s) | 276, 531, 743, 1511, 1658 |
| Tru9I | TTAA | 5 cut(s) | 276, 531, 743, 1511, 1658 |
| TscAI | CASTG | 4 cut(s) | 182, 741, 971, 1394 |
| TseFI | GTSAC | 2 cut(s) | 122, 1600 |
| TseI | GCWGC | 3 cut(s) | 89, 1414, 1517 |
| Tsp45I | GTSAC | 2 cut(s) | 122, 1600 |
| TspDTI | ATGAA | 4 cut(s) | 531, 1565, 1673, 1709 |
| TspGWI | ACGGA | 1 cut(s) | 1145 |
| TspRI | CASTG | 4 cut(s) | 182, 741, 971, 1394 |
| Tth111I | GACNNNGTC | 1 cut(s) | 571 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1277 |
| VpaK11BI | GGWCC | 1 cut(s) | 1280 |
| XapI | RAATTY | 4 cut(s) | 262, 1507, 1572, 1692 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 672 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1442 |
| ZraI | GACGTC | 1 cut(s) | 1479 |