AT5G49760
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000487
Physical Location & Seq
Forward (+)
20216332 .. 20221382
5051 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G49760.1

Sequence Viewer

Length: 2862 bp
ATGAGTTCAAGAACTGGAGCCTCTTTGCTCCTGATCTTGTTTTTCTTCCAAATTTGTTCTGTTTCGGCACTCACGAATGGTTTAGACGCTTCTGCTTTAAATGCTCTGAAGAGTGAATGGACCACTCCTCCTGATGGTTGGGAAGGCTCTGATCCTTGTGGAACCAATTGGGTTGGAATTACATGTCAAAATGACCGCGTCGTTTCAATATCACTAGGTAACCTTGACTTGGAAGGAAAGCTTCCTGCCGATATATCGTTCTTGTCCGAGTTGCGGATCTTGGATTTGTCATACAATCCTAAATTGTCCGGACCGCTTCCACCAAACATCGGTAACCTTGGGAAGTTAAGGAACTTGATCCTTGTGGGATGTAGTTTCAGTGGTCAAATCCCTGAGTCCATTGGAACTCTAAAAGAACTTATATATCTCTCCCTAAATTTAAATAAATTTAGTGGAACAATTCCGCCTTCAATTGGCCTGTTATCAAAACTATATTGGTTTGATATAGCTGACAATCAGATTGAAGGAGAGCTTCCAGTTTCTAATGGGACTTCTGCACCTGGACTTGACATGCTTCTTCAAACTAAGCATTTTCATTTTGGAAAAAACAAGCTTTCAGGCAATATCCCAAAAGAACTTTTCAGCTCAAACATGAGTTTAATACATGTCCTCTTCGATGGAAACCAATTCACGGGCGAAATTCCAGAGACCCTCAGTCTCGTTAAAACGTTGACGGTGTTACGCCTTGATAGGAACAAACTCATTGGAGATATTCCTTCATATCTTAACAATCTCACAAATCTTAACGAACTGTACTTGGCCAACAACAGATTTACTGGTACTCTTCCAAATTTAACCAGCTTGACCAGTCTCTACACATTGGATGTGAGCAATAACACTTTGGATTTCTCACCCATTCCATCATGGATCTCTTCATTACCCTCCCTATCAACATTAAGGATGGAAGGGATCCAACTTAATGGTCCAATACCAATCTCATTTTTCAGCCCTCCTCAGTTGCAGACTGTTATCTTAAAGCGAAATAGTATAGTGGAAAGCTTAGACTTTGGTACAGACGTTAGCAGCCAGTTGGAGTTTGTGGATTTACAATACAATGAAATAACTGATTATAAACCATCAGCTAATAAAGTCCTCCAAGTAATATTGGCAAATAATCCAGTGTGTCTAGAGGCGGGAAACGGGCCGAGTTACTGTTCAGCAATCCAACACAATACCTCATTTTCTACACTCCCAACAAACTGTTCTCCATGCGAACCGGGCATGGAAGCGAGTCCCACGTGCCGCTGTGCGTATCCATTCATGGGAACACTCTACTTCCGGTCTCCTTCTTTCTCAGGGTTGTTCAACTCCACCAACTTCTCAATTCTACAGAAGGCAATCGCGGATTTCTTTAAGAAGTTCAATTATCCTGTAGACTCCGTTGGTGTTCGGAACATAAGAGAGAATCCAACTGATCATCAGCTTCTAATAGATCTATTGGTCTTTCCATTGGGAAGAGAGAGTTTTAATCAGACAGGAATGTCACTTGTTGGTTTTGCATTTAGCAACCAGACTTATAAGCCTCCTCCGATATTTGGCCCTTATATTTTCAAAGCTGATTTGTACAAACAGTTCTCTGATGTAGAAGTTTCATCAAAGTCATCAAACAAAAGCATTCTCATTGGAGCAGTAGTTGGTGTTGTTGTTCTTCTACTATTGTTAACAATAGCTGGGATTTACGCTCTTAGGCAGAAGAAGAGAGCTGAAAGAGCAACTGGTCAAAATAATCCTTTTGCTAAATGGGATACAAGTAAGAGTAGTATTGATGCTCCGCAGCTAATGGGAGCAAAAGCGTTTACTTTTGAGGAGCTGAAGAAATGCACTGACAACTTTTCAGAGGCAAATGATGTTGGCGGTGGAGGTTACGGCAAGGTTTATAGAGGGATTCTTCCTAATGGGCAACTCATAGCAATCAAAAGGGCTCAACAAGGATCTTTGCAAGGAGGGTTGGAGTTCAAAACTGAGATTGAGCTTCTCTCAAGGGTCCATCATAAGAATGTTGTCAGACTCTTGGGCTTCTGCTTTGACCGGAATGAACAAATGCTCGTATACGAGTACATTTCAAATGGGTCACTTAAAGACAGTCTGTCCGGGAAGAGTGGGATTCGATTGGATTGGACAAGAAGACTTAAAATAGCACTTGGTTCAGGCAAGGGCTTGGCTTATCTTCATGAACTTGCTGATCCTCCAATTATACATAGAGACATCAAATCAAATAACATATTACTTGATGAAAATCTAACCGCAAAGGTTGCCGACTTCGGTCTCTCCAAACTTGTGGGAGACCCTGAGAAAACTCATGTCACAACACAAGTCAAAGGAACCATGGGCTACTTGGATCCAGAGTACTACATGACGAATCAATTAACGGAGAAGAGCGATGTGTATGGGTTTGGTGTGGTTTTACTCGAGCTATTAACCGGTAGAAGTCCGATAGAGAGAGGCAAATATGTGGTGAGAGAGGTGAAGACAAAGATGAATAAATCTCGGAGTTTGTATGACCTGCAGGAGTTGTTGGACACAACGATCATAGCAAGCAGTGGGAATCTAAAAGGGTTCGAGAAGTATGTAGACTTGGCTTTGAGATGTGTGGAGGAGGAAGGAGTTAATAGGCCATCAATGGGTGAGGTTGTGAAAGAGATTGAGAACATAATGCAGCTTGCGGGATTAAATCCTAACTCAGATTCAGCAACGAGTTCAAGAACGTATGAGGACGCAATCAAAGGATCTGGTGATCCTTATGGCAGTGAATCGTTTCAGTACAGTGGGAATTTTCCAGCTTCAAAGCTTGAGCCCCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 Pkinase Pkinase_Tyr

Protein Analysis

953

Amino Acids

104.71

Weight (kDa)

5.87

Isoelectric Point (pI)

34.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 88 - 170 5.4e-07 Leucine-rich repeat region
LRR_4 PF12799 266 - 306 7.6e-06 Leucine Rich repeats (2 copies)
Pkinase PF00069 633 - 899 2.4e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 635 - 899 2.7e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1131, 1578
AasI GACNNNNNNGTC 1 cut(s) 1540
Acc36I ACCTGC 1 cut(s) 2571
AccI GTMKAC 3 cut(s) 1434, 2109, 2631
AccII CGCG 2 cut(s) 198, 1403
AccIII TCCGGA 1 cut(s) 308
AclI AACGTT 1 cut(s) 728
AcoI YGGCCR 1 cut(s) 819
AcsI RAATTY 6 cut(s) 51, 436, 446, 699, 850, 2830
AcuI CTGAAG 2 cut(s) 128, 1892
AcvI CACGTG 1 cut(s) 1299
AfaI GTAC 7 cut(s) 815, 841, 1072, 1625, 2117, 2408, 2822
AfiI CCNNNNNNNGG 9 cut(s) 134, 229, 273, 329, 473, 691, 1322, 1595, 2681
AflIII ACRYGT 2 cut(s) 182, 664
AgeI ACCGGT 1 cut(s) 2480
AhdI GACNNNNNGTC 2 cut(s) 714, 2146
AjnI CCWGG 1 cut(s) 559
AjuI GAANNNNNNNTTGG 2 cut(s) 1246, 1278
Alw26I GTCTC 7 cut(s) 701, 722, 875, 1347, 2256, 2330, 2337
Ama87I CYCGRG 1 cut(s) 2468
Aor13HI TCCGGA 1 cut(s) 308
AoxI GGCC 5 cut(s) 475, 819, 1202, 1597, 2672
ApeKI GCWGC 3 cut(s) 1083, 1834, 2716
ApoI RAATTY 6 cut(s) 51, 436, 446, 699, 850, 2830
AsiGI ACCGGT 1 cut(s) 2480
Asp700I GAANNNNTTC 1 cut(s) 2814
AspS9I GGNCC 6 cut(s) 120, 311, 983, 1202, 1598, 2044
AsuC2I CCSGG 2 cut(s) 1278, 2152
AsuHPI GGTGA 5 cut(s) 903, 2527, 2536, 2696, 2804
AvaI CYCGRG 1 cut(s) 2468
AvaII GGWCC 4 cut(s) 120, 311, 983, 2044
BaeI ACNNNNGTAYC 2 cut(s) 1062, 1095
BalI TGGCCA 1 cut(s) 821
BamHI GGATCC 2 cut(s) 969, 2398
BanII GRGCYC 2 cut(s) 1984, 2856
BbrPI CACGTG 1 cut(s) 1299
BbsI GAAGAC 2 cut(s) 2191, 2534
BbvI GCAGC 3 cut(s) 1095, 1846, 2728
BccI CCATC 7 cut(s) 128, 671, 928, 955, 1144, 2055, 2683
BceAI ACGGC 1 cut(s) 1942
BciT130I CCWGG 1 cut(s) 561
BciVI GTATCC 2 cut(s) 1323, 1798
BclI TGATCA 1 cut(s) 1474
BcnI CCSGG 2 cut(s) 1278, 2152
BcoDI GTCTC 7 cut(s) 701, 722, 875, 1347, 2256, 2330, 2337
BfaI CTAG 2 cut(s) 215, 1187
BfmI CTRYAG 3 cut(s) 1388, 1431, 2564
BfuAI ACCTGC 1 cut(s) 2571
BfuI GTATCC 2 cut(s) 1323, 1798
BglII AGATCT 1 cut(s) 1492
BisI GCNGC 4 cut(s) 1084, 1303, 1835, 2717
BlsI GCNGC 4 cut(s) 1085, 1304, 1836, 2718
BmcAI AGTACT 1 cut(s) 2408
Bme1390I CCNGG 3 cut(s) 561, 1278, 2152
Bme18I GGWCC 4 cut(s) 120, 311, 983, 2044
BmeRI GACNNNNNGTC 2 cut(s) 714, 2146
BmeT110I CYCGRG 1 cut(s) 2468
BmgT120I GGNCC 6 cut(s) 120, 311, 983, 1202, 1598, 2044
BmiI GGNNCC 6 cut(s) 19, 163, 971, 2045, 2383, 2400
BmrFI CCNGG 3 cut(s) 561, 1278, 2152
BmsI GCATC 1 cut(s) 1816
BoxI GACNNNNGTC 1 cut(s) 2322
BpiI GAAGAC 2 cut(s) 2191, 2534
BplI GAGNNNNNCTC 2 cut(s) 2021, 2053
BpmI CTGGAG 1 cut(s) 36
BpuEI CTTGAG 1 cut(s) 2023
BpuMI CCSGG 2 cut(s) 1278, 2152
BsaAI YACGTR 1 cut(s) 1299
BsaBI GATNNNNATC 1 cut(s) 2295
BsaI GGTCTC 4 cut(s) 701, 1347, 2330, 2337
BsaJI CCNNGG 2 cut(s) 337, 2385
BsaWI WCCGGW 4 cut(s) 308, 1338, 2088, 2480
BsaXI ACNNNNNCTCC 4 cut(s) 112, 142, 1677, 1707
Bsc4I CCNNNNNNNGG 9 cut(s) 134, 229, 273, 329, 473, 691, 1322, 1595, 2681
Bse118I RCCGGY 1 cut(s) 2480
Bse1I ACTGG 7 cut(s) 19, 536, 841, 867, 1087, 1178, 1780
Bse8I GATNNNNATC 1 cut(s) 2295
BseAI TCCGGA 1 cut(s) 308
BseBI CCWGG 1 cut(s) 561
BseDI CCNNGG 2 cut(s) 337, 2385
BseGI GGATG 3 cut(s) 374, 889, 966
BseJI GATNNNNATC 1 cut(s) 2295
BseLI CCNNNNNNNGG 9 cut(s) 134, 229, 273, 329, 473, 691, 1322, 1595, 2681
BseMII CTCAG 7 cut(s) 384, 727, 1028, 1368, 2013, 2340, 2754
BseNI ACTGG 7 cut(s) 19, 536, 841, 867, 1087, 1178, 1780
BseRI GAGGAG 5 cut(s) 117, 1002, 1575, 1880, 2669
BseXI GCAGC 3 cut(s) 1095, 1846, 2728
BseYI CCCAGC 1 cut(s) 1730
BsgI GTGCAG 1 cut(s) 540
Bsh1236I CGCG 2 cut(s) 198, 1403
BshFI GGCC 5 cut(s) 477, 821, 1204, 1599, 2674
BshTI ACCGGT 1 cut(s) 2480
BsiHKCI CYCGRG 1 cut(s) 2468
BsiSI CCGG 6 cut(s) 309, 1277, 1339, 2089, 2151, 2481
BslFI GGGAC 2 cut(s) 562, 1278
BslI CCNNNNNNNGG 9 cut(s) 134, 229, 273, 329, 473, 691, 1322, 1595, 2681
BsmAI GTCTC 7 cut(s) 701, 722, 875, 1347, 2256, 2330, 2337
BsmFI GGGAC 2 cut(s) 562, 1278
BsmI GAATGC 1 cut(s) 1674
BsnI GGCC 5 cut(s) 477, 821, 1204, 1599, 2674
Bso31I GGTCTC 4 cut(s) 701, 1347, 2330, 2337
BsoBI CYCGRG 1 cut(s) 2468
Bsp1286I GDGCHC 2 cut(s) 1984, 2856
Bsp13I TCCGGA 1 cut(s) 308
Bsp1407I TGTACA 1 cut(s) 1623
Bsp19I CCATGG 1 cut(s) 2385
BspANI GGCC 5 cut(s) 477, 821, 1204, 1599, 2674
BspCNI CTCAG 7 cut(s) 385, 726, 1027, 1367, 2014, 2341, 2753
BspEI TCCGGA 1 cut(s) 308
BspFNI CGCG 2 cut(s) 198, 1403
BspHI TCATGA 1 cut(s) 2230
BspLI GGNNCC 6 cut(s) 19, 163, 971, 2045, 2383, 2400
BspMAI CTGCAG 1 cut(s) 2568
BspMI ACCTGC 1 cut(s) 2571
BspQI GCTCTTC 1 cut(s) 2429
BspTNI GGTCTC 4 cut(s) 701, 1347, 2330, 2337
BsrFI RCCGGY 1 cut(s) 2480
BsrGI TGTACA 1 cut(s) 1623
BsrI ACTGG 7 cut(s) 19, 536, 841, 867, 1087, 1178, 1780
BssAI RCCGGY 1 cut(s) 2480
BssECI CCNNGG 2 cut(s) 337, 2385
BssNAI GTATAC 1 cut(s) 2110
BssT1I CCWWGG 2 cut(s) 337, 2385
Bst1107I GTATAC 1 cut(s) 2110
Bst2UI CCWGG 1 cut(s) 561
Bst4CI ACNGT 8 cut(s) 736, 813, 1027, 1214, 1262, 1632, 2144, 2825
Bst6I CTCTTC 8 cut(s) 104, 677, 849, 937, 1510, 1751, 2150, 2429
BstAPI GCANNNNNTGC 1 cut(s) 2312
BstAUI TGTACA 1 cut(s) 1623
BstBAI YACGTR 1 cut(s) 1299
BstC8I GCNNGC 2 cut(s) 2596, 2721
BstDSI CCRYGG 1 cut(s) 2385
BstEII GGTNACC 2 cut(s) 218, 332
BstF5I GGATG 3 cut(s) 374, 889, 966
BstFNI CGCG 2 cut(s) 198, 1403
BstMAI GTCTC 7 cut(s) 701, 722, 875, 1347, 2256, 2330, 2337
BstMWI GCNNNNNNNGC 4 cut(s) 101, 1278, 1769, 2312
BstNI CCWGG 1 cut(s) 561
BstNSI RCATGY 3 cut(s) 186, 574, 668
BstPAI GACNNNNGTC 1 cut(s) 2322
BstPI GGTNACC 2 cut(s) 218, 332
BstSCI CCNGG 3 cut(s) 559, 1276, 2150
BstSFI CTRYAG 3 cut(s) 1388, 1431, 2564
BstUI CGCG 2 cut(s) 198, 1403
BstV1I GCAGC 3 cut(s) 1095, 1846, 2728
BstV2I GAAGAC 2 cut(s) 2191, 2534
BstX2I RGATCY 7 cut(s) 276, 927, 969, 1492, 1991, 2398, 2786
BstXI CCANNNNNNTGG 2 cut(s) 980, 2338
BstYI RGATCY 7 cut(s) 276, 927, 969, 1492, 1991, 2398, 2786
BstZ17I GTATAC 1 cut(s) 2110
BsuI GTATCC 2 cut(s) 1323, 1798
BsuRI GGCC 5 cut(s) 477, 821, 1204, 1599, 2674
BtgI CCRYGG 1 cut(s) 2385
BtgZI GCGATG 1 cut(s) 2454
BtsCI GGATG 3 cut(s) 374, 889, 966
BtsI GCAGTG 2 cut(s) 2605, 2812
BtsIMutI CAGTG 6 cut(s) 385, 1185, 1881, 2605, 2812, 2830
BveI ACCTGC 1 cut(s) 2571
Cac8I GCNNGC 2 cut(s) 2596, 2721
CciI TCATGA 1 cut(s) 2230
Cfr10I RCCGGY 1 cut(s) 2480
Cfr13I GGNCC 6 cut(s) 120, 311, 983, 1202, 1598, 2044
CpoI CGGWCCG 1 cut(s) 311
CseI GACGC 3 cut(s) 95, 187, 2783
Csp6I GTAC 7 cut(s) 814, 840, 1071, 1624, 2116, 2407, 2821
CspAI ACCGGT 1 cut(s) 2480
CspI CGGWCCG 1 cut(s) 311
CviQI GTAC 7 cut(s) 814, 840, 1071, 1624, 2116, 2407, 2821
DraI TTTAAA 2 cut(s) 99, 441
DrdI GACNNNNNNGTC 1 cut(s) 1540
DriI GACNNNNNGTC 2 cut(s) 714, 2146
DseDI GACNNNNNNGTC 1 cut(s) 1540
EaeI YGGCCR 1 cut(s) 819
Eam1104I CTCTTC 8 cut(s) 104, 677, 849, 937, 1510, 1751, 2150, 2429
Eam1105I GACNNNNNGTC 2 cut(s) 714, 2146
EarI CTCTTC 8 cut(s) 104, 677, 849, 937, 1510, 1751, 2150, 2429
EciI GGCGGA 1 cut(s) 453
Eco130I CCWWGG 2 cut(s) 337, 2385
Eco24I GRGCYC 2 cut(s) 1984, 2856
Eco31I GGTCTC 4 cut(s) 701, 1347, 2330, 2337
Eco47I GGWCC 4 cut(s) 120, 311, 983, 2044
Eco57I CTGAAG 2 cut(s) 128, 1892
Eco72I CACGTG 1 cut(s) 1299
Eco88I CYCGRG 1 cut(s) 2468
Eco91I GGTNACC 2 cut(s) 218, 332
EcoO65I GGTNACC 2 cut(s) 218, 332
EcoRII CCWGG 1 cut(s) 559
EcoT14I CCWWGG 2 cut(s) 337, 2385
EcoT38I GRGCYC 2 cut(s) 1984, 2856
ErhI CCWWGG 2 cut(s) 337, 2385
FalI AAGNNNNNCTT 4 cut(s) 225, 257, 516, 548
FaqI GGGAC 2 cut(s) 562, 1278
FauI CCCGC 2 cut(s) 1186, 2716
FbaI TGATCA 1 cut(s) 1474
FblI GTMKAC 3 cut(s) 1434, 2109, 2631
Fnu4HI GCNGC 4 cut(s) 1084, 1303, 1835, 2717
FokI GGATG 3 cut(s) 381, 896, 973
FriOI GRGCYC 2 cut(s) 1984, 2856
Fsp4HI GCNGC 4 cut(s) 1084, 1303, 1835, 2717
FspBI CTAG 2 cut(s) 215, 1187
GluI GCNGC 4 cut(s) 1084, 1303, 1835, 2717
GsaI CCCAGC 1 cut(s) 1734
GsuI CTGGAG 1 cut(s) 36
HaeIII GGCC 5 cut(s) 477, 821, 1204, 1599, 2674
HapII CCGG 6 cut(s) 309, 1277, 1339, 2089, 2151, 2481
HgaI GACGC 3 cut(s) 95, 187, 2783
HincII GTYRAC 2 cut(s) 732, 1722
HindII GTYRAC 2 cut(s) 732, 1722
HindIII AAGCTT 4 cut(s) 239, 611, 1057, 2846
HpaI GTTAAC 1 cut(s) 1722
HpaII CCGG 6 cut(s) 309, 1277, 1339, 2089, 2151, 2481
HphI GGTGA 5 cut(s) 903, 2527, 2536, 2696, 2804
Hpy166II GTNNAC 6 cut(s) 732, 1435, 1722, 1857, 2110, 2632
Hpy8I GTNNAC 6 cut(s) 732, 1435, 1722, 1857, 2110, 2632
Hpy99I CGWCG 1 cut(s) 203
HpyAV CCTTC 9 cut(s) 137, 227, 477, 518, 786, 959, 1356, 1387, 2654
HpyCH4III ACNGT 8 cut(s) 736, 813, 1027, 1214, 1262, 1632, 2144, 2825
HpyCH4IV ACGT 4 cut(s) 728, 1077, 1298, 2765
HpyCH4V TGCA 7 cut(s) 557, 1021, 1559, 1881, 1999, 2566, 2716
HpyF10VI GCNNNNNNNGC 4 cut(s) 101, 1278, 1769, 2312
HpySE526I ACGT 4 cut(s) 728, 1077, 1298, 2765
Kpn2I TCCGGA 1 cut(s) 308
Ksp22I TGATCA 1 cut(s) 1474
KspAI GTTAAC 1 cut(s) 1722
LguI GCTCTTC 1 cut(s) 2429
LmnI GCTCC 6 cut(s) 17, 33, 1685, 1834, 1844, 1867
Lsp1109I GCAGC 3 cut(s) 1095, 1846, 2728
LweI GCATC 1 cut(s) 1816
MaeI CTAG 2 cut(s) 215, 1187
MaeII ACGT 4 cut(s) 728, 1077, 1298, 2765
MaeIII GTNAC 8 cut(s) 218, 332, 738, 1208, 1542, 1922, 2130, 2362
MfeI CAATTG 2 cut(s) 166, 471
MflI RGATCY 7 cut(s) 276, 927, 969, 1492, 1991, 2398, 2786
MhlI GDGCHC 2 cut(s) 1984, 2856
MlsI TGGCCA 1 cut(s) 821
MluNI TGGCCA 1 cut(s) 821
MlyI GAGTC 4 cut(s) 404, 1300, 1430, 2061
MmeI TCCRAC 7 cut(s) 154, 997, 1071, 1249, 1493, 1989, 2556
Mox20I TGGCCA 1 cut(s) 821
MroI TCCGGA 1 cut(s) 308
MroXI GAANNNNTTC 1 cut(s) 2814
MscI TGGCCA 1 cut(s) 821
MslI CAYNNNNRTG 1 cut(s) 2055
Msp20I TGGCCA 1 cut(s) 821
MspA1I CMGCKG 1 cut(s) 1305
MspI CCGG 6 cut(s) 309, 1277, 1339, 2089, 2151, 2481
MspR9I CCNGG 3 cut(s) 561, 1278, 2152
MunI CAATTG 2 cut(s) 166, 471
Mva1269I GAATGC 1 cut(s) 1674
MvaI CCWGG 1 cut(s) 561
MvnI CGCG 2 cut(s) 198, 1403
MwoI GCNNNNNNNGC 4 cut(s) 101, 1278, 1769, 2312
NciI CCSGG 2 cut(s) 1278, 2152
NcoI CCATGG 1 cut(s) 2385
NlaIV GGNNCC 6 cut(s) 19, 163, 971, 2045, 2383, 2400
NmeAIII GCCGAG 1 cut(s) 1230
NmuCI GTSAC 3 cut(s) 1542, 2130, 2362
NspI RCATGY 3 cut(s) 186, 574, 668
PaeR7I CTCGAG 1 cut(s) 2468
PagI TCATGA 1 cut(s) 2230
PciI ACATGT 2 cut(s) 182, 664
PciSI GCTCTTC 1 cut(s) 2429
PcsI WCGNNNNNNNCGW 1 cut(s) 71
PctI GAATGC 1 cut(s) 1674
PdmI GAANNNNTTC 1 cut(s) 2814
PfeI GAWTC 7 cut(s) 1465, 1945, 2164, 2419, 2605, 2744, 2810
PflFI GACNNNGTC 1 cut(s) 197
PfoI TCCNGGA 1 cut(s) 2150
PinAI ACCGGT 1 cut(s) 2480
PkrI GCNGC 4 cut(s) 1085, 1304, 1836, 2718
PleI GAGTC 4 cut(s) 403, 1299, 1430, 2061
PmaCI CACGTG 1 cut(s) 1299
PmlI CACGTG 1 cut(s) 1299
PpsI GAGTC 4 cut(s) 403, 1299, 1430, 2061
Ppu21I YACGTR 1 cut(s) 1299
PscI ACATGT 2 cut(s) 182, 664
PshAI GACNNNNGTC 1 cut(s) 2322
PsiI TTATAA 2 cut(s) 1131, 1578
Psp1406I AACGTT 1 cut(s) 728
Psp6I CCWGG 1 cut(s) 559
PspCI CACGTG 1 cut(s) 1299
PspEI GGTNACC 2 cut(s) 218, 332
PspFI CCCAGC 1 cut(s) 1730
PspGI CCWGG 1 cut(s) 559
PspN4I GGNNCC 6 cut(s) 19, 163, 971, 2045, 2383, 2400
PspPI GGNCC 6 cut(s) 120, 311, 983, 1202, 1598, 2044
PspXI VCTCGAGB 1 cut(s) 2468
PsrI GAACNNNNNNTAC 2 cut(s) 1616, 1648
PstI CTGCAG 1 cut(s) 2568
PsuI RGATCY 7 cut(s) 276, 927, 969, 1492, 1991, 2398, 2786
PsyI GACNNNGTC 1 cut(s) 197
RsaI GTAC 7 cut(s) 815, 841, 1072, 1625, 2117, 2408, 2822
RsaNI GTAC 7 cut(s) 814, 840, 1071, 1624, 2116, 2407, 2821
RseI CAYNNNNRTG 1 cut(s) 2055
Rsr2I CGGWCCG 1 cut(s) 311
RsrII CGGWCCG 1 cut(s) 311
SapI GCTCTTC 1 cut(s) 2429
SatI GCNGC 4 cut(s) 1084, 1303, 1835, 2717
Sau96I GGNCC 6 cut(s) 120, 311, 983, 1202, 1598, 2044
SbfI CCTGCAGG 1 cut(s) 2568
ScaI AGTACT 1 cut(s) 2408
SchI GAGTC 4 cut(s) 404, 1300, 1430, 2061
ScrFI CCNGG 3 cut(s) 561, 1278, 2152
SdaI CCTGCAGG 1 cut(s) 2568
SduI GDGCHC 2 cut(s) 1984, 2856
SfaNI GCATC 1 cut(s) 1816
SfcI CTRYAG 3 cut(s) 1388, 1431, 2564
Sfr274I CTCGAG 1 cut(s) 2468
SinI GGWCC 4 cut(s) 120, 311, 983, 2044
SlaI CTCGAG 1 cut(s) 2468
SmiI ATTTAAAT 1 cut(s) 441
SmiMI CAYNNNNRTG 1 cut(s) 2055
SmlI CTYRAG 3 cut(s) 2038, 2468, 2849
SmoI CTYRAG 3 cut(s) 2038, 2468, 2849
Sse8387I CCTGCAGG 1 cut(s) 2568
SspI AATATT 1 cut(s) 1164
SspMI CTAG 2 cut(s) 215, 1187
StyD4I CCNGG 3 cut(s) 559, 1276, 2150
StyI CCWWGG 2 cut(s) 337, 2385
SwaI ATTTAAAT 1 cut(s) 441
TaaI ACNGT 8 cut(s) 736, 813, 1027, 1214, 1262, 1632, 2144, 2825
TaiI ACGT 4 cut(s) 731, 1080, 1301, 2768
TaqI TCGA 4 cut(s) 675, 2167, 2469, 2619
TaqII GACCGA 1 cut(s) 2312
TatI WGTACW 5 cut(s) 813, 1623, 2115, 2406, 2820
TauI GCSGC 1 cut(s) 1305
TfiI GAWTC 7 cut(s) 1465, 1945, 2164, 2419, 2605, 2744, 2810
TscAI CASTG 6 cut(s) 385, 1185, 1888, 2605, 2812, 2830
TseFI GTSAC 3 cut(s) 1542, 2130, 2362
TseI GCWGC 3 cut(s) 1083, 1834, 2716
Tsp45I GTSAC 3 cut(s) 1542, 2130, 2362
TspGWI ACGGA 2 cut(s) 1429, 2444
TspRI CASTG 6 cut(s) 385, 1185, 1888, 2605, 2812, 2830
Tth111I GACNNNGTC 1 cut(s) 197
VpaK11BI GGWCC 4 cut(s) 120, 311, 983, 2044
XapI RAATTY 6 cut(s) 51, 436, 446, 699, 850, 2830
XbaI TCTAGA 1 cut(s) 1186
XceI RCATGY 3 cut(s) 186, 574, 668
XcmI CCANNNNNNNNNTGG 1 cut(s) 2392
XhoI CTCGAG 1 cut(s) 2468
XmiI GTMKAC 3 cut(s) 1434, 2109, 2631
XmnI GAANNNNTTC 1 cut(s) 2814
XspI CTAG 2 cut(s) 215, 1187
ZrmI AGTACT 1 cut(s) 2408
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.