RchiOBHm_Chr5g0042261

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000487
Physical Location & Seq
Reverse (-)
37016806 .. 37021695
4890 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32067

Sequence Viewer

Length: 2649 bp
ATGACACTAGGGGATGAATGGGGCATCAACCCTCCAAGTTGGGTTGGTTCAGATCCATGTGGCGACTGGGAAGGTATTACTTGCACCAATTCACGGATCACTGCTATAACATTGGCAGACATGGGTTTGAAAGGTGGGCTACCTAGTGATATCGAGACATTATCTGAGCTACAGATTCTGAATCTGGCTTTCAATGAGGACCTGAAGGGACAACTTCAAGCAACAATTGGAAACTTGACCAAACTAGAAACCTTAATCCTGGATGGTTGCAGATTCTCTGGTCCTATTCCAGCTACAATAGGATCTTTAAAGCAACTTTCTTATCTATCTCTGAAAAACAATAGATTTAGTGGTCCAATTCCACCTTCCATTGGCAATCTAGCCAATCTTGTCTTTCTGGACCTATCAGACAACAGGCTTGGGGATTCCATTCCAGTCTCTAATGGGACTGCACCTGGTCTTGATATGTTAAATAAAACAAAGCACTTTCATTTTTCAAATAACCAGCTCTCGGGCAGCATTCCACCTCAACTGTTCAGCTCAAATATGCCTCTGATACATTTGATTTTTGACAGAAATAATTTTACTGGCAGCATCCCTTCCACACTTGGACTTGTGAAAACTCTGGAGGCGGTACGCCTTGATAGAAATTCATTAAGTGGGTCTGTACCTACGAGCCTCAGAAATCTTACAAATGTGTCTGAACTGCACTTGTCCAACAATAAGCTGACTGGCCCAGTGCCCAACCTTACTCTCATGGATTCCCTCAACTATGTGGATATGAGCAATAATACTTTTGACGCGTCAGATATTCCTAATTGGTTTTCAACCTTGAAGTTCTTGACAACATTGATACTAAAGAACAACAGTCTCAATGGTACATTGGATATTGGAACTAATATTGGCAACCGATTGAACCTAATTGATCTGCAGAAGAACAACATTGCTGATCTTGCACCAATTGATGAGGGATCCAACTACACATTGATTCTAGTTGACAATCCAATTTGTGAGGGGAGTCAGAATAACATGGCAAAGAACTACTGTAATGGTTCTCCTACTAATTCCTCGATTTCAACTGCACCAAGTAATTGTGCTGGCTGTAGTTCAGGCCAGGTTGCTTCCCCCAGTTGTAAATGTGCATCTCCCTATACACGGACTCTAGTCTTCTTATTTGTTTCTTTCTCAAACTTGGATGACATCAACTATTACAAAGCTCTCTCAAACAATCTCACAAGATCTCTTCACTCCAAAAACCTTCCTGTGGATTCAGTTTCACTGAGTCATCCGAGCTGGAGCTCATCTTATCAACTTGAAATTATCATAGAAATTTTCCCATCTGGTGATCAAGTTAGCTTCAACCAAACAGAAAGTTCGGCGATTACATCTGTTCTTAGCAACCAGAGTCTAGAGGGACGTCCAAATTCTTTTGGACCCTACTCTTTTCTTGTTCTTTACACCAACTCTGGAGGATCAAACAAGGGCGTGATAATTGGAATGGCAATTGGTGGTTCTGTGCTCCTTTCATTATTAGTCCTTGTAGGGCTTTATGCTCTCCACCAAAAGAGGAAAGCAGATGAGTCAAAGAGTGGATCGATCCTTTTGACAGGGATTCCAAATAGCAGTGCTAGTGGTCCTCAACTAAAAGGAGCAAGATTGTTCTCATTTGAAGAGCTCAAGAAATGCACCGATGGTTTTTCAAAAGCAACTGATATTGGATCTGGGGGTTTTGGCCAGGTGTATAAGGGAATTCTTCCAACAGGCCAAATGGTTGCCATTAAAAGAGCTAAACGGGAATCTATGCAGGGAGGAGTTGAGTTCAATGCCGAGGTTGAGCTCCTATCACGAGTACATCATAAGAATCTTGTTGGCCTTGTAGGCTTTTGTTTTGAGCAAGGAGAACAAATATTGGTATATGAGTATGTTCCAAATGGTGATTTGAGGGACAGCCTATCAGGGAAGTCTGGAATCAGGTTGGACTGGACGAGAAGACTTCAAGTAGCACTTGGTGCAGCGAGAGGTCTGGCATATCTTCATGAACATGCAAACCCAAGCATTATACACCGGGACATCAAATCAAACAACATACTACTCGATAAAGATTTAAATGCAAAAGTTGCTGATTTTGGTCTCTCCAAGTCAATTGCTGATAGTGGAATGGATCACTTATCTACTCAAGTTAAAGGGACAGTGGGCTACTTGGATCCTGAATATTATATGACTCAACAGTTAACTGACAAGAGCGACGTGTATAGCTTTGGCGTGGTAATGTTGGAGCTGATAACTGCTAGAAGGCCAATAATGCAAGGGAATTATATAGTCAGAGTGGTACAGATGACAATAGATAAGTCGAAAGATTTGTACAACCTTGATGACATTCTTGATCCATTCATTGGTTTAGGAACAGAGCTGAAAGGTGTAGAAATGTTTGTGGATTTGGCAATGTCTTGTGTAGAAGAACTAAGGGATAAAAGACCAAGAATGGGGGAAGTGGTGAAACAGATAGAGAACATTATACAAATTGCTGCTTTGAACGCCGGTACAAATCCATTGTCCACTTCAGCAAGTTATGAGGAATATGACTGTAAGGACAGCACCGAGGATGTTTACAGCAGACCCTTTGATTATAGTGGAGTTTTTGACGGATGA

Protein Analysis

882

Amino Acids

95.73

Weight (kDa)

5.3

Isoelectric Point (pI)

34.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 81 - 140 1.3e-06 Leucine rich repeat
LRR_14 PF23598 98 - 285 2.8e-06 Leucine-rich repeat region
Pkinase PF00069 567 - 833 3.6e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 569 - 833 1.2e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1420
AccB7I CCANNNNNTGG 1 cut(s) 2393
AccII CGCG 1 cut(s) 803
AciI CCGC 1 cut(s) 632
AcoI YGGCCR 1 cut(s) 1732
AcsI RAATTY 4 cut(s) 649, 1329, 1423, 1749
AcuI CTGAAG 2 cut(s) 224, 2544
AcyI GRCGYC 1 cut(s) 1417
AdeI CACNNNGTG 1 cut(s) 2009
AfaI GTAC 7 cut(s) 636, 669, 880, 1851, 2331, 2363, 2542
AfiI CCNNNNNNNGG 7 cut(s) 93, 371, 511, 1155, 1264, 2393, 2483
AflIII ACRYGT 2 cut(s) 801, 2247
AjiI CACGTC 1 cut(s) 2248
AjnI CCWGG 4 cut(s) 258, 454, 1113, 1734
AjuI GAANNNNNNNTTGG 2 cut(s) 349, 381
Alw21I GWGCWC 4 cut(s) 1301, 1521, 1677, 1839
Alw26I GTCTC 4 cut(s) 149, 442, 875, 2135
AlwNI CAGNNNCTG 1 cut(s) 178
Ama87I CYCGRG 1 cut(s) 511
AoxI GGCC 6 cut(s) 733, 1111, 1732, 1762, 1870, 2294
ApeKI GCWGC 4 cut(s) 516, 591, 2012, 2525
ApoI RAATTY 4 cut(s) 649, 1329, 1423, 1749
ArsI GACNNNNNNTTYG 2 cut(s) 2537, 2569
AspS9I GGNCC 7 cut(s) 199, 281, 353, 400, 734, 1433, 1634
AsuC2I CCSGG 1 cut(s) 2066
AsuHPI GGTGA 3 cut(s) 1355, 1946, 2506
AvaI CYCGRG 1 cut(s) 511
AvaII GGWCC 6 cut(s) 199, 281, 353, 400, 1433, 1634
BaeGI GKGCMC 1 cut(s) 744
BalI TGGCCA 1 cut(s) 1734
BamHI GGATCC 2 cut(s) 971, 2203
BanII GRGCYC 3 cut(s) 1301, 1677, 1839
BauI CACGAG 1 cut(s) 1845
BbsI GAAGAC 2 cut(s) 1159, 1996
Bbv12I GWGCWC 4 cut(s) 1301, 1521, 1677, 1839
BbvI GCAGC 4 cut(s) 528, 603, 2024, 2512
BccI CCATC 3 cut(s) 257, 1345, 1685
BciT130I CCWGG 4 cut(s) 260, 456, 1115, 1736
BclI TGATCA 1 cut(s) 1345
BcnI CCSGG 1 cut(s) 2066
BcoDI GTCTC 4 cut(s) 149, 442, 875, 2135
BfaI CTAG 9 cut(s) 8, 144, 245, 380, 992, 1163, 1409, 1629, 2289
BfmI CTRYAG 3 cut(s) 170, 929, 1102
BglI GCCNNNNNGGC 1 cut(s) 1878
BglII AGATCT 1 cut(s) 1238
BisI GCNGC 4 cut(s) 517, 592, 2013, 2526
BlsI GCNGC 4 cut(s) 518, 593, 2014, 2527
Bme1390I CCNGG 5 cut(s) 260, 456, 1115, 1736, 2066
Bme18I GGWCC 6 cut(s) 199, 281, 353, 400, 1433, 1634
BmeT110I CYCGRG 1 cut(s) 511
BmgBI CACGTC 1 cut(s) 2248
BmgT120I GGNCC 7 cut(s) 199, 281, 353, 400, 734, 1433, 1634
BmiI GGNNCC 3 cut(s) 973, 1435, 2205
BmrFI CCNGG 5 cut(s) 260, 456, 1115, 1736, 2066
BmrI ACTGGG 3 cut(s) 76, 731, 1122
BmsI GCATC 3 cut(s) 33, 603, 1151
BmuI ACTGGG 3 cut(s) 76, 731, 1122
BoxI GACNNNNGTC 1 cut(s) 1163
BpiI GAAGAC 2 cut(s) 1159, 1996
BpmI CTGGAG 3 cut(s) 647, 1315, 1488
BpuEI CTTGAG 2 cut(s) 1661, 2160
BpuMI CCSGG 1 cut(s) 2066
Bsa29I ATCGAT 1 cut(s) 1595
BsaHI GRCGYC 1 cut(s) 1417
BsaI GGTCTC 1 cut(s) 2135
BsaJI CCNNGG 2 cut(s) 1827, 2598
Bsc4I CCNNNNNNNGG 7 cut(s) 93, 371, 511, 1155, 1264, 2393, 2483
Bse118I RCCGGY 1 cut(s) 2537
Bse1I ACTGG 7 cut(s) 71, 434, 592, 736, 737, 1128, 1985
Bse3DI GCAATG 2 cut(s) 942, 2448
BseBI CCWGG 4 cut(s) 260, 456, 1115, 1736
BseCI ATCGAT 1 cut(s) 1595
BseDI CCNNGG 2 cut(s) 1827, 2598
BseGI GGATG 6 cut(s) 19, 268, 594, 1201, 1285, 2608
BseLI CCNNNNNNNGG 7 cut(s) 93, 371, 511, 1155, 1264, 2393, 2483
BseMI GCAATG 2 cut(s) 942, 2448
BseMII CTCAG 3 cut(s) 156, 694, 1271
BseNI ACTGG 7 cut(s) 71, 434, 592, 736, 737, 1128, 1985
BseRI GAGGAG 1 cut(s) 1824
BseSI GKGCMC 1 cut(s) 744
BseXI GCAGC 4 cut(s) 528, 603, 2024, 2512
BsgI GTGCAG 4 cut(s) 435, 692, 1065, 2031
Bsh1236I CGCG 1 cut(s) 803
BshFI GGCC 6 cut(s) 735, 1113, 1734, 1764, 1872, 2296
BshVI ATCGAT 1 cut(s) 1595
BsiHKAI GWGCWC 4 cut(s) 1301, 1521, 1677, 1839
BsiHKCI CYCGRG 1 cut(s) 511
BsiSI CCGG 2 cut(s) 2065, 2538
BslFI GGGAC 6 cut(s) 222, 460, 1428, 1958, 2081, 2200
BslI CCNNNNNNNGG 7 cut(s) 93, 371, 511, 1155, 1264, 2393, 2483
BsmAI GTCTC 4 cut(s) 149, 442, 875, 2135
BsmFI GGGAC 6 cut(s) 222, 460, 1428, 1958, 2081, 2200
BsmI GAATGC 1 cut(s) 519
BsnI GGCC 6 cut(s) 735, 1113, 1734, 1764, 1872, 2296
Bso31I GGTCTC 1 cut(s) 2135
BsoBI CYCGRG 1 cut(s) 511
Bsp1286I GDGCHC 5 cut(s) 744, 1301, 1521, 1677, 1839
Bsp1407I TGTACA 1 cut(s) 2361
BspACI CCGC 1 cut(s) 632
BspANI GGCC 6 cut(s) 735, 1113, 1734, 1764, 1872, 2296
BspCNI CTCAG 3 cut(s) 157, 693, 1272
BspDI ATCGAT 1 cut(s) 1595
BspFNI CGCG 1 cut(s) 803
BspHI TCATGA 1 cut(s) 2035
BspLI GGNNCC 3 cut(s) 973, 1435, 2205
BspMAI CTGCAG 1 cut(s) 933
BspQI GCTCTTC 1 cut(s) 1665
BspTNI GGTCTC 1 cut(s) 2135
BsrDI GCAATG 2 cut(s) 942, 2448
BsrFI RCCGGY 1 cut(s) 2537
BsrGI TGTACA 1 cut(s) 2361
BsrI ACTGG 7 cut(s) 71, 434, 592, 736, 737, 1128, 1985
BssAI RCCGGY 1 cut(s) 2537
BssECI CCNNGG 2 cut(s) 1827, 2598
BssNI GRCGYC 1 cut(s) 1417
BssSI CACGAG 1 cut(s) 1845
Bst2BI CACGAG 1 cut(s) 1845
Bst2UI CCWGG 4 cut(s) 260, 456, 1115, 1736
Bst4CI ACNGT 6 cut(s) 534, 869, 1046, 2191, 2229, 2585
Bst6I CTCTTC 2 cut(s) 1248, 1665
BstACI GRCGYC 1 cut(s) 1417
BstAPI GCANNNNNTGC 2 cut(s) 2009, 2117
BstAUI TGTACA 1 cut(s) 2361
BstC8I GCNNGC 1 cut(s) 1099
BstDEI CTNAG 5 cut(s) 165, 680, 1280, 1394, 2462
BstF5I GGATG 6 cut(s) 19, 268, 594, 1201, 1285, 2608
BstFNI CGCG 1 cut(s) 803
BstMAI GTCTC 4 cut(s) 149, 442, 875, 2135
BstMWI GCNNNNNNNGC 6 cut(s) 953, 1878, 2009, 2117, 2302, 2534
BstNI CCWGG 4 cut(s) 260, 456, 1115, 1736
BstNSI RCATGY 1 cut(s) 2045
BstPAI GACNNNNGTC 1 cut(s) 1163
BstSCI CCNGG 5 cut(s) 258, 454, 1113, 1734, 2064
BstSFI CTRYAG 3 cut(s) 170, 929, 1102
BstSLI GKGCMC 1 cut(s) 744
BstUI CGCG 1 cut(s) 803
BstV1I GCAGC 4 cut(s) 528, 603, 2024, 2512
BstV2I GAAGAC 2 cut(s) 1159, 1996
BstX2I RGATCY 6 cut(s) 52, 302, 971, 1238, 1718, 2203
BstYI RGATCY 6 cut(s) 52, 302, 971, 1238, 1718, 2203
Bsu15I ATCGAT 1 cut(s) 1595
BsuRI GGCC 6 cut(s) 735, 1113, 1734, 1764, 1872, 2296
BsuTUI ATCGAT 1 cut(s) 1595
BtrI CACGTC 1 cut(s) 2248
BtsCI GGATG 6 cut(s) 19, 268, 594, 1201, 1285, 2608
BtsI GCAGTG 2 cut(s) 99, 1630
BtsIMutI CAGTG 5 cut(s) 99, 744, 1277, 1630, 2196
Cac8I GCNNGC 1 cut(s) 1099
CaiI CAGNNNCTG 1 cut(s) 178
CciI TCATGA 1 cut(s) 2035
Cfr10I RCCGGY 1 cut(s) 2537
Cfr13I GGNCC 7 cut(s) 199, 281, 353, 400, 734, 1433, 1634
ClaI ATCGAT 1 cut(s) 1595
CseI GACGC 2 cut(s) 792, 809
CsiI ACCWGGT 1 cut(s) 454
Csp6I GTAC 7 cut(s) 635, 668, 879, 1850, 2330, 2362, 2541
CviAII CATG 6 cut(s) 57, 121, 757, 1030, 2036, 2042
CviQI GTAC 7 cut(s) 635, 668, 879, 1850, 2330, 2362, 2541
DdeI CTNAG 5 cut(s) 165, 680, 1280, 1394, 2462
DraI TTTAAA 2 cut(s) 309, 2106
DraIII CACNNNGTG 1 cut(s) 2009
EaeI YGGCCR 1 cut(s) 1732
Eam1104I CTCTTC 2 cut(s) 1248, 1665
EarI CTCTTC 2 cut(s) 1248, 1665
Ecl136II GAGCTC 3 cut(s) 1299, 1675, 1837
Eco24I GRGCYC 3 cut(s) 1301, 1677, 1839
Eco31I GGTCTC 1 cut(s) 2135
Eco32I GATATC 1 cut(s) 151
Eco47I GGWCC 6 cut(s) 199, 281, 353, 400, 1433, 1634
Eco53kI GAGCTC 3 cut(s) 1299, 1675, 1837
Eco57I CTGAAG 2 cut(s) 224, 2544
Eco88I CYCGRG 1 cut(s) 511
EcoICRI GAGCTC 3 cut(s) 1299, 1675, 1837
EcoO109I RGGNCCY 1 cut(s) 199
EcoRI GAATTC 1 cut(s) 1749
EcoRII CCWGG 4 cut(s) 258, 454, 1113, 1734
EcoRV GATATC 1 cut(s) 151
EcoT38I GRGCYC 3 cut(s) 1301, 1677, 1839
FaeI CATG 6 cut(s) 60, 124, 760, 1033, 2039, 2045
FalI AAGNNNNNCTT 2 cut(s) 1989, 2021
FaqI GGGAC 6 cut(s) 222, 460, 1428, 1958, 2081, 2200
FatI CATG 6 cut(s) 56, 120, 756, 1029, 2035, 2041
FbaI TGATCA 1 cut(s) 1345
Fnu4HI GCNGC 4 cut(s) 517, 592, 2013, 2526
FokI GGATG 6 cut(s) 26, 275, 581, 1208, 1272, 2615
FriOI GRGCYC 3 cut(s) 1301, 1677, 1839
Fsp4HI GCNGC 4 cut(s) 517, 592, 2013, 2526
FspBI CTAG 9 cut(s) 8, 144, 245, 380, 992, 1163, 1409, 1629, 2289
GluI GCNGC 4 cut(s) 517, 592, 2013, 2526
GsuI CTGGAG 3 cut(s) 647, 1315, 1488
HaeIII GGCC 6 cut(s) 735, 1113, 1734, 1764, 1872, 2296
HapII CCGG 2 cut(s) 2065, 2538
HgaI GACGC 2 cut(s) 792, 809
Hin1I GRCGYC 1 cut(s) 1417
Hin1II CATG 6 cut(s) 60, 124, 760, 1033, 2039, 2045
HincII GTYRAC 2 cut(s) 997, 2232
HindII GTYRAC 2 cut(s) 997, 2232
HpaI GTTAAC 1 cut(s) 2232
HpaII CCGG 2 cut(s) 2065, 2538
HphI GGTGA 3 cut(s) 1355, 1946, 2506
Hpy166II GTNNAC 4 cut(s) 997, 2232, 2556, 2608
Hpy8I GTNNAC 4 cut(s) 997, 2232, 2556, 2608
Hpy99I CGWCG 1 cut(s) 2249
HpyAV CCTTC 6 cut(s) 65, 199, 375, 609, 1268, 2286
HpyCH4III ACNGT 6 cut(s) 534, 869, 1046, 2191, 2229, 2585
HpyCH4IV ACGT 2 cut(s) 1417, 2247
HpyF10VI GCNNNNNNNGC 6 cut(s) 953, 1878, 2009, 2117, 2302, 2534
HpyF3I CTNAG 5 cut(s) 165, 680, 1280, 1394, 2462
HpySE526I ACGT 2 cut(s) 1417, 2247
Hsp92I GRCGYC 1 cut(s) 1417
Hsp92II CATG 6 cut(s) 60, 124, 760, 1033, 2039, 2045
Ksp22I TGATCA 1 cut(s) 1345
KspAI GTTAAC 1 cut(s) 2232
LguI GCTCTTC 1 cut(s) 1665
LmnI GCTCC 5 cut(s) 1296, 1524, 1649, 1842, 2275
Lsp1109I GCAGC 4 cut(s) 528, 603, 2024, 2512
LweI GCATC 3 cut(s) 33, 603, 1151
MabI ACCWGGT 1 cut(s) 454
MaeI CTAG 9 cut(s) 8, 144, 245, 380, 992, 1163, 1409, 1629, 2289
MaeII ACGT 2 cut(s) 1417, 2247
MboII GAAGA 8 cut(s) 946, 1159, 1235, 1682, 1745, 2001, 2024, 2468
MfeI CAATTG 4 cut(s) 225, 960, 1503, 2142
MflI RGATCY 6 cut(s) 52, 302, 971, 1238, 1718, 2203
MhlI GDGCHC 5 cut(s) 744, 1301, 1521, 1677, 1839
MlsI TGGCCA 1 cut(s) 1734
MluI ACGCGT 1 cut(s) 801
MluNI TGGCCA 1 cut(s) 1734
MlyI GAGTC 6 cut(s) 1027, 1153, 1291, 1414, 1589, 2215
MmeI TCCRAC 5 cut(s) 741, 999, 1781, 1956, 2253
Mox20I TGGCCA 1 cut(s) 1734
MscI TGGCCA 1 cut(s) 1734
MseI TTAA 8 cut(s) 254, 308, 470, 656, 1779, 2105, 2181, 2231
MslI CAYNNNNRTG 1 cut(s) 2040
Msp20I TGGCCA 1 cut(s) 1734
MspI CCGG 2 cut(s) 2065, 2538
MspR9I CCNGG 5 cut(s) 260, 456, 1115, 1736, 2066
MunI CAATTG 4 cut(s) 225, 960, 1503, 2142
Mva1269I GAATGC 1 cut(s) 519
MvaI CCWGG 4 cut(s) 260, 456, 1115, 1736
MvnI CGCG 1 cut(s) 803
MwoI GCNNNNNNNGC 6 cut(s) 953, 1878, 2009, 2117, 2302, 2534
NciI CCSGG 1 cut(s) 2066
NlaIII CATG 6 cut(s) 60, 124, 760, 1033, 2039, 2045
NlaIV GGNNCC 3 cut(s) 973, 1435, 2205
NmeAIII GCCGAG 1 cut(s) 1852
NspI RCATGY 1 cut(s) 2045
PagI TCATGA 1 cut(s) 2035
PciSI GCTCTTC 1 cut(s) 1665
PctI GAATGC 1 cut(s) 519
PflMI CCANNNNNTGG 1 cut(s) 2393
PfoI TCCNGGA 1 cut(s) 258
PkrI GCNGC 4 cut(s) 518, 593, 2014, 2527
PleI GAGTC 6 cut(s) 1026, 1153, 1290, 1413, 1588, 2215
PpsI GAGTC 6 cut(s) 1026, 1153, 1290, 1413, 1588, 2215
PpuMI RGGWCCY 1 cut(s) 199
PshAI GACNNNNGTC 1 cut(s) 1163
Psp124BI GAGCTC 3 cut(s) 1301, 1677, 1839
Psp5II RGGWCCY 1 cut(s) 199
Psp6I CCWGG 4 cut(s) 258, 454, 1113, 1734
PspGI CCWGG 4 cut(s) 258, 454, 1113, 1734
PspN4I GGNNCC 3 cut(s) 973, 1435, 2205
PspPI GGNCC 7 cut(s) 199, 281, 353, 400, 734, 1433, 1634
PspPPI RGGWCCY 1 cut(s) 199
PstI CTGCAG 1 cut(s) 933
PstNI CAGNNNCTG 1 cut(s) 178
PsuI RGATCY 6 cut(s) 52, 302, 971, 1238, 1718, 2203
RsaI GTAC 7 cut(s) 636, 669, 880, 1851, 2331, 2363, 2542
RsaNI GTAC 7 cut(s) 635, 668, 879, 1850, 2330, 2362, 2541
RseI CAYNNNNRTG 1 cut(s) 2040
SacI GAGCTC 3 cut(s) 1301, 1677, 1839
SapI GCTCTTC 1 cut(s) 1665
SaqAI TTAA 8 cut(s) 254, 308, 470, 656, 1779, 2105, 2181, 2231
SatI GCNGC 4 cut(s) 517, 592, 2013, 2526
Sau96I GGNCC 7 cut(s) 199, 281, 353, 400, 734, 1433, 1634
SchI GAGTC 6 cut(s) 1027, 1153, 1291, 1414, 1589, 2215
ScrFI CCNGG 5 cut(s) 260, 456, 1115, 1736, 2066
SduI GDGCHC 5 cut(s) 744, 1301, 1521, 1677, 1839
SexAI ACCWGGT 1 cut(s) 454
SfaNI GCATC 3 cut(s) 33, 603, 1151
SfcI CTRYAG 3 cut(s) 170, 929, 1102
SinI GGWCC 6 cut(s) 199, 281, 353, 400, 1433, 1634
SmiI ATTTAAAT 1 cut(s) 2106
SmiMI CAYNNNNRTG 1 cut(s) 2040
SmlI CTYRAG 2 cut(s) 1676, 2175
SmoI CTYRAG 2 cut(s) 1676, 2175
SsiI CCGC 1 cut(s) 632
SspI AATATT 3 cut(s) 901, 1908, 2213
SspMI CTAG 9 cut(s) 8, 144, 245, 380, 992, 1163, 1409, 1629, 2289
SstI GAGCTC 3 cut(s) 1301, 1677, 1839
StyD4I CCNGG 5 cut(s) 258, 454, 1113, 1734, 2064
SwaI ATTTAAAT 1 cut(s) 2106
TaaI ACNGT 6 cut(s) 534, 869, 1046, 2191, 2229, 2585
TaiI ACGT 2 cut(s) 1420, 2250
TaqI TCGA 5 cut(s) 153, 1070, 1595, 2094, 2351
TatI WGTACW 2 cut(s) 1849, 2361
Tru1I TTAA 8 cut(s) 254, 308, 470, 656, 1779, 2105, 2181, 2231
Tru9I TTAA 8 cut(s) 254, 308, 470, 656, 1779, 2105, 2181, 2231
TscAI CASTG 5 cut(s) 106, 744, 1284, 1630, 2196
TseI GCWGC 4 cut(s) 516, 591, 2012, 2525
TspDTI ATGAA 7 cut(s) 30, 479, 642, 1515, 2024, 2052, 2380
TspGWI ACGGA 2 cut(s) 109, 1171
TspRI CASTG 5 cut(s) 106, 744, 1284, 1630, 2196
Van91I CCANNNNNTGG 1 cut(s) 2393
VpaK11BI GGWCC 6 cut(s) 199, 281, 353, 400, 1433, 1634
XapI RAATTY 4 cut(s) 649, 1329, 1423, 1749
XbaI TCTAGA 1 cut(s) 1408
XceI RCATGY 1 cut(s) 2045
XcmI CCANNNNNNNNNTGG 1 cut(s) 63
XspI CTAG 9 cut(s) 8, 144, 245, 380, 992, 1163, 1409, 1629, 2289
ZraI GACGTC 1 cut(s) 1418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.