FvH4_3g23870

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000487
Physical Location & Seq
Reverse (-)
16932536 .. 16940075
7540 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g23870.t3

Sequence Viewer

Length: 2820 bp
ATGGGTCGTGCCAATCGTGTGTTTCGGCTACTCCTGTTATTCCTATTGTTTGTTATTGCGGCAGAGGGAACTGTCGAGGAGTATACTACTATTATGATCCTCCAAGACGAGTGGAAAATAAAACCTCCAAGTTGGGTTGGTTCTGATCCTTGTGGCAACTGGGAAGGCATCACTTGCACCAATTCACGCATCACTACTCTAGCATTGGCAGACATGGGTTTGAAAGGCGGGATACCTAGTGATATTGAGACGTTATCTGAGCTACAGATTCTGAATCTGGCTTTCAACGAGGACCTGAAGGGACAACTTCGAGCATCAATTGGAAACTTGACCAAACTAAAAACCTTAAATCTTGATGGTTGCAGGTTCTCCGGTCATATTCCAGCTACAATAGGATCTCTAAAGCAACTTACTTATCTATCTCTGAAAAACAATAGATTTAGTGGTCCAATTCCACCTTCCATTGGCAATCTAGCCAATCTTGTCTTTCTGGACCTATCGGACAACATGCTTGGGGATTCCATTCCAGTCTCTAATGGGACTGCACCTGGTCTTGATATGTTAAATAAAACAAAGCACTTTCATTTTTCAAATAACCAGCTCTCGGGCAGCATTCCACCTCAACTGTTCAGCTCAAATATGTCTCTGGTACATTTGATTTTTGACAGAAATAATTTTACTGGCAGCATCCCTTCCACACTCGGACTTGTGAAAACTCTGGAGGCAGTACTCCTTTATAGAAATTCATTAAGTGGGCCAGTACCTTCGAGCCTCAGAAATCTTACTAAGGTGTCTGAACTACAATTGTCCAACAATAAGCTGACTGGTCCTATGCCCAACCTTACTCTCATGGATTCCCTCCACTATGTGGATATGAGTAATAATACTTTTGATGCGTCAGATGTTCCCAATTGGTTTTCAACCTTGAAGTTCTTGACAACATTAATGATGGAAAACACAGGACTTCAGGGACAAGTCCCTCAATCCCTTTTCAGCCTTCAAGATTTGGAGACAGTGAGACTAAAGAACAACGGTCTCAATGGTACATTGGATATTGGAACCAATTACAGCAGCCAATTGAACCTAATTGATCTGCAGATGAACAACATTTCTGATGTTGCACCGATTGATGAGGAGCACAACTACACATTGATTCTAGTTGACAATCCAATTTGCAAGGGGAGTCAGAATAACATGGCAAATAACTACTGCAATGTTTCTCCTCCTAATTCCTCAGTTTCAACTACACCAAGTAATTGTGATACCTGTAGATCTGGCCAGGTTGCTTCCCCCAACTGTAAATGTGCATCTCCCTACACACGAACTCTAGTCTTCTTATTTGTTTCTTTCTCAAACCTGGATAACGTCAATTATTACAAAGCTCTCTCGGACAATCTCACAAGATATTTTCAGTCCAGAAACCTTCCTGTGGATTCAGTTTCACTGAGTCATCCGAGCTGGAGCCCATCTAATCAACTGGAAATTATCATGGAAATGTTCCCATCCGGTGATCAAGTTAGCTTCAACCAAACAGAAACTTCAGCGATTACTTCTGTTCTAAGCAACCAGACTCTAGAGGGGCGTCCTATTCATTTTGGACCCTACTCTTTTCTTGTTCTTTACACCAACTCTGGAGGATCAAACAAGGCCGTGATTATCGGAACGGCAATTGGTGGTTCTGTGCTCCTTTCCTTATTAGTCCTTGTAGGGCTTTATGCTCTCCACCAGAAGAGGAAAGAAGATGAGACATTGAGCGGATCGATCCTTTTGACAGGGTTTTCAAATAGCACTGCTGGTGGTCCTCAACTAAAAGGAGCAAGATTGTTCTCATTTGAAGAGCTCAAGAAATGCACAGATGGTTTTTCAGAAGCAAATGATATTGGATCTGGAGGTTATGGACAGGTGTATAAGGCAATTCTTCCAACAGGCCAAATGGTTGCCATTAAAAGAGCTAAACGGGAATCCATGCAGGGAGGAGTTGAGTTCACAGCCGAGGTTGAGCTCCTATCGCGAGTACATCATAAGAATCTTGTTGGTCTTGTAGGTTTTTGTTTTGAGCAAGGAGAGCAAATATTGGTATATGAGTATGTTCCAAATGGTGATTTGAGGGACACCCTTTCAGGGAAGTCCGGAATCAGGTTGGACTGGATGAGAAGACTTCAAATAGCACTTGGTGCAGCAAGAGGTCTGGCATATCTTCATGAACTTGCAAACCCGACCATTATACACCGGGACATCAAATCAAACAACATACTACTCGATAAAGATTTAAATGCAAAAGTTGCTGATTTTGGTCTCTCCAAGTCATTTGCTGATAGTGGAACTGGAATGGACCACTTATCTACTCAAGTTAAAGGGACACTGGGCTACTTGGATCCGGAATATTATATGACTCAACAGTTGACTGAGAAGAGTGACGTCTATAGCTTCGGCGTGGTAATGTTGGAGCTGATAACTGCTAGAAGGCCAATAGTGCAAGGGCAATATATAGTGAGAGTGGTACAGATGAGAATGGATAAGTCGAAAGATTTGTACGACCTTGATGACATTCTTGACCCTTTCATTGGTTTAGGAACAGAGCTGAAAGGTGTAGAAATGTTTGTGGATTTGGCAATGTCTTGTGTAGAAGAATTAAGGGATAAAAGACCAAGAATGGGGGAAGTGGTGAAACAGATAGAGAACCTTATACAAATTGCTGGTTTGAACGCCAGTATTAATCCATTGTCCACTTCAGCAAGGTATGAGGAATATGAGAGTAAGGACAGCAACGAGGATATTTACAGCAGACCCTTTGATTATAGTGGAGTTTTTGAGGGATGA

Protein Analysis

940

Amino Acids

103.27

Weight (kDa)

5.34

Isoelectric Point (pI)

35.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 86 - 168 2.5e-08 Leucine-rich repeat region
LRR_8 PF13855 112 - 171 6.5e-07 Leucine rich repeat
Pkinase PF00069 622 - 890 5.7e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 625 - 891 4.3e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2421
Acc36I ACCTGC 1 cut(s) 354
AccB7I CCANNNNNTGG 1 cut(s) 868
AccBSI CCGCTC 1 cut(s) 1755
AccI GTMKAC 1 cut(s) 83
AccII CGCG 1 cut(s) 2011
AccIII TCCGGA 2 cut(s) 2129, 2377
AciI CCGC 3 cut(s) 59, 228, 1755
AclWI GGATC 9 cut(s) 91, 140, 403, 1645, 1756, 1765, 1891, 2369, 2382
AcoI YGGCCR 1 cut(s) 1276
AcsI RAATTY 1 cut(s) 742
AcuI CTGAAG 4 cut(s) 317, 950, 1524, 2715
AcyI GRCGYC 2 cut(s) 1582, 2418
AdeI CACNNNGTG 2 cut(s) 868, 2174
AfaI GTAC 7 cut(s) 651, 729, 762, 1045, 2016, 2502, 2534
AfiI CCNNNNNNNGG 8 cut(s) 464, 604, 868, 1429, 2121, 2136, 2564, 2654
AjnI CCWGG 3 cut(s) 547, 1278, 1356
AjuI GAANNNNNNNTTGG 2 cut(s) 442, 474
Alw21I GWGCWC 4 cut(s) 1140, 1686, 1842, 2004
Alw26I GTCTC 8 cut(s) 242, 535, 648, 1004, 1012, 1040, 1739, 2300
AlwI GGATC 9 cut(s) 91, 140, 403, 1645, 1756, 1765, 1891, 2369, 2382
AlwNI CAGNNNCTG 1 cut(s) 271
Ama87I CYCGRG 1 cut(s) 604
Aor13HI TCCGGA 2 cut(s) 2129, 2377
AoxI GGCC 5 cut(s) 755, 1276, 1647, 1927, 2465
ApeKI GCWGC 4 cut(s) 609, 684, 1071, 2177
ApoI RAATTY 1 cut(s) 742
AseI ATTAAT 2 cut(s) 944, 2715
AspS9I GGNCC 8 cut(s) 292, 446, 493, 755, 827, 1598, 1799, 2332
AsuC2I CCSGG 1 cut(s) 2231
AsuHPI GGTGA 3 cut(s) 1520, 2111, 2677
AvaI CYCGRG 1 cut(s) 604
AvaII GGWCC 7 cut(s) 292, 446, 493, 827, 1598, 1799, 2332
BalI TGGCCA 1 cut(s) 1278
BamHI GGATCC 1 cut(s) 2374
BanII GRGCYC 3 cut(s) 1466, 1842, 2004
BbsI GAAGAC 2 cut(s) 1324, 2161
Bbv12I GWGCWC 4 cut(s) 1140, 1686, 1842, 2004
BbvI GCAGC 4 cut(s) 621, 696, 1083, 2189
BccI CCATC 5 cut(s) 350, 943, 1474, 1510, 1850
BceAI ACGGC 2 cut(s) 1634, 1680
BciT130I CCWGG 3 cut(s) 549, 1280, 1358
BciVI GTATCC 1 cut(s) 225
BclI TGATCA 1 cut(s) 1510
BcnI CCSGG 1 cut(s) 2231
BcoDI GTCTC 8 cut(s) 242, 535, 648, 1004, 1012, 1040, 1739, 2300
BfaI CTAG 7 cut(s) 200, 237, 473, 1157, 1328, 1574, 2460
BfmI CTRYAG 4 cut(s) 263, 1094, 1267, 2422
BfuAI ACCTGC 1 cut(s) 354
BfuI GTATCC 1 cut(s) 225
BglII AGATCT 1 cut(s) 1271
BisI GCNGC 5 cut(s) 60, 610, 685, 1072, 2178
BlsI GCNGC 5 cut(s) 61, 611, 686, 1073, 2179
BmcAI AGTACT 1 cut(s) 729
Bme1390I CCNGG 4 cut(s) 549, 1280, 1358, 2231
Bme18I GGWCC 7 cut(s) 292, 446, 493, 827, 1598, 1799, 2332
BmeT110I CYCGRG 1 cut(s) 604
BmgT120I GGNCC 8 cut(s) 292, 446, 493, 755, 827, 1598, 1799, 2332
BmiI GGNNCC 4 cut(s) 1060, 1463, 1600, 2376
BmrFI CCNGG 4 cut(s) 549, 1280, 1358, 2231
BmrI ACTGGG 2 cut(s) 169, 2372
BmsI GCATC 6 cut(s) 177, 198, 323, 696, 883, 1316
BmuI ACTGGG 2 cut(s) 169, 2372
BpiI GAAGAC 2 cut(s) 1324, 2161
BpmI CTGGAG 4 cut(s) 740, 1480, 1653, 1908
BpuEI CTTGAG 2 cut(s) 1826, 2331
BpuMI CCSGG 1 cut(s) 2231
Bsa29I ATCGAT 1 cut(s) 1760
BsaHI GRCGYC 2 cut(s) 1582, 2418
BsaI GGTCTC 2 cut(s) 1040, 2300
BsaJI CCNNGG 1 cut(s) 1992
BsaWI WCCGGW 4 cut(s) 371, 1505, 2129, 2377
Bsc4I CCNNNNNNNGG 8 cut(s) 464, 604, 868, 1429, 2121, 2136, 2564, 2654
Bse3DI GCAATG 2 cut(s) 1219, 2619
BseAI TCCGGA 2 cut(s) 2129, 2377
BseBI CCWGG 3 cut(s) 549, 1280, 1358
BseCI ATCGAT 1 cut(s) 1760
BseDI CCNNGG 1 cut(s) 1992
BseGI GGATG 4 cut(s) 687, 1450, 1502, 2154
BseLI CCNNNNNNNGG 8 cut(s) 464, 604, 868, 1429, 2121, 2136, 2564, 2654
BseMI GCAATG 2 cut(s) 1219, 2619
BseMII CTCAG 5 cut(s) 249, 787, 1248, 1436, 2397
BseRI GAGGAG 4 cut(s) 92, 1148, 1212, 1989
BseXI GCAGC 4 cut(s) 621, 696, 1083, 2189
BsgI GTGCAG 2 cut(s) 528, 2196
Bsh1236I CGCG 1 cut(s) 2011
BshFI GGCC 5 cut(s) 757, 1278, 1649, 1929, 2467
BshVI ATCGAT 1 cut(s) 1760
BsiHKAI GWGCWC 4 cut(s) 1140, 1686, 1842, 2004
BsiHKCI CYCGRG 1 cut(s) 604
BsiSI CCGG 5 cut(s) 372, 1506, 2130, 2230, 2378
BslFI GGGAC 7 cut(s) 315, 553, 962, 984, 2123, 2246, 2371
BslI CCNNNNNNNGG 8 cut(s) 464, 604, 868, 1429, 2121, 2136, 2564, 2654
BsmAI GTCTC 8 cut(s) 242, 535, 648, 1004, 1012, 1040, 1739, 2300
BsmBI CGTCTC 1 cut(s) 242
BsmFI GGGAC 7 cut(s) 315, 553, 962, 984, 2123, 2246, 2371
BsmI GAATGC 1 cut(s) 612
BsnI GGCC 5 cut(s) 757, 1278, 1649, 1929, 2467
Bso31I GGTCTC 2 cut(s) 1040, 2300
BsoBI CYCGRG 1 cut(s) 604
Bsp1286I GDGCHC 5 cut(s) 1140, 1466, 1686, 1842, 2004
Bsp13I TCCGGA 2 cut(s) 2129, 2377
Bsp68I TCGCGA 1 cut(s) 2011
BspACI CCGC 3 cut(s) 59, 228, 1755
BspANI GGCC 5 cut(s) 757, 1278, 1649, 1929, 2467
BspCNI CTCAG 5 cut(s) 250, 786, 1247, 1437, 2398
BspDI ATCGAT 1 cut(s) 1760
BspEI TCCGGA 2 cut(s) 2129, 2377
BspFNI CGCG 1 cut(s) 2011
BspHI TCATGA 1 cut(s) 2200
BspLI GGNNCC 4 cut(s) 1060, 1463, 1600, 2376
BspMAI CTGCAG 1 cut(s) 1098
BspMI ACCTGC 1 cut(s) 354
BspPI GGATC 9 cut(s) 91, 140, 403, 1645, 1756, 1765, 1891, 2369, 2382
BspQI GCTCTTC 1 cut(s) 1830
BspTNI GGTCTC 2 cut(s) 1040, 2300
BsrBI CCGCTC 1 cut(s) 1755
BsrDI GCAATG 2 cut(s) 1219, 2619
BssECI CCNNGG 1 cut(s) 1992
BssNAI GTATAC 1 cut(s) 84
BssNI GRCGYC 2 cut(s) 1582, 2418
Bst1107I GTATAC 1 cut(s) 84
Bst2UI CCWGG 3 cut(s) 549, 1280, 1358
Bst4CI ACNGT 6 cut(s) 73, 627, 1015, 1034, 1298, 2400
Bst6I CTCTTC 3 cut(s) 1724, 1830, 2405
BstACI GRCGYC 2 cut(s) 1582, 2418
BstAPI GCANNNNNTGC 3 cut(s) 174, 2174, 2282
BstDEI CTNAG 7 cut(s) 258, 773, 786, 1234, 1445, 1559, 2406
BstF5I GGATG 4 cut(s) 687, 1450, 1502, 2154
BstFNI CGCG 1 cut(s) 2011
BstMAI GTCTC 8 cut(s) 242, 535, 648, 1004, 1012, 1040, 1739, 2300
BstMWI GCNNNNNNNGC 6 cut(s) 174, 2008, 2065, 2174, 2282, 2473
BstNI CCWGG 3 cut(s) 549, 1280, 1358
BstNSI RCATGY 1 cut(s) 511
BstSCI CCNGG 4 cut(s) 547, 1278, 1356, 2229
BstSFI CTRYAG 4 cut(s) 263, 1094, 1267, 2422
BstUI CGCG 1 cut(s) 2011
BstV1I GCAGC 4 cut(s) 621, 696, 1083, 2189
BstV2I GAAGAC 2 cut(s) 1324, 2161
BstX2I RGATCY 4 cut(s) 395, 1271, 1883, 2374
BstYI RGATCY 4 cut(s) 395, 1271, 1883, 2374
BstZ17I GTATAC 1 cut(s) 84
Bsu15I ATCGAT 1 cut(s) 1760
BsuI GTATCC 1 cut(s) 225
BsuRI GGCC 5 cut(s) 757, 1278, 1649, 1929, 2467
BsuTUI ATCGAT 1 cut(s) 1760
BtsCI GGATG 4 cut(s) 687, 1450, 1502, 2154
BtsI GCAGTG 1 cut(s) 1788
BtsIMutI CAGTG 4 cut(s) 1020, 1442, 1788, 2360
BtuMI TCGCGA 1 cut(s) 2011
BveI ACCTGC 1 cut(s) 354
CaiI CAGNNNCTG 1 cut(s) 271
CciI TCATGA 1 cut(s) 2200
Cfr13I GGNCC 8 cut(s) 292, 446, 493, 755, 827, 1598, 1799, 2332
ClaI ATCGAT 1 cut(s) 1760
CseI GACGC 2 cut(s) 885, 1571
CsiI ACCWGGT 1 cut(s) 547
Csp6I GTAC 7 cut(s) 650, 728, 761, 1044, 2015, 2501, 2533
CspCI CAANNNNNGTGG 2 cut(s) 92, 127
CviAII CATG 7 cut(s) 214, 508, 850, 1195, 1489, 1966, 2201
CviQI GTAC 7 cut(s) 650, 728, 761, 1044, 2015, 2501, 2533
DdeI CTNAG 7 cut(s) 258, 773, 786, 1234, 1445, 1559, 2406
DraI TTTAAA 1 cut(s) 2271
DraIII CACNNNGTG 2 cut(s) 868, 2174
EaeI YGGCCR 1 cut(s) 1276
Eam1104I CTCTTC 3 cut(s) 1724, 1830, 2405
EarI CTCTTC 3 cut(s) 1724, 1830, 2405
Ecl136II GAGCTC 2 cut(s) 1840, 2002
Eco24I GRGCYC 3 cut(s) 1466, 1842, 2004
Eco31I GGTCTC 2 cut(s) 1040, 2300
Eco47I GGWCC 7 cut(s) 292, 446, 493, 827, 1598, 1799, 2332
Eco53kI GAGCTC 2 cut(s) 1840, 2002
Eco57I CTGAAG 4 cut(s) 317, 950, 1524, 2715
Eco88I CYCGRG 1 cut(s) 604
EcoICRI GAGCTC 2 cut(s) 1840, 2002
EcoO109I RGGNCCY 1 cut(s) 292
EcoRII CCWGG 3 cut(s) 547, 1278, 1356
EcoT38I GRGCYC 3 cut(s) 1466, 1842, 2004
Esp3I CGTCTC 1 cut(s) 242
FaeI CATG 7 cut(s) 217, 511, 853, 1198, 1492, 1969, 2204
FaqI GGGAC 7 cut(s) 315, 553, 962, 984, 2123, 2246, 2371
FatI CATG 7 cut(s) 213, 507, 849, 1194, 1488, 1965, 2200
FauI CCCGC 1 cut(s) 221
FbaI TGATCA 1 cut(s) 1510
FblI GTMKAC 1 cut(s) 83
Fnu4HI GCNGC 5 cut(s) 60, 610, 685, 1072, 2178
FokI GGATG 4 cut(s) 674, 1437, 1489, 2161
FriOI GRGCYC 3 cut(s) 1466, 1842, 2004
Fsp4HI GCNGC 5 cut(s) 60, 610, 685, 1072, 2178
FspBI CTAG 7 cut(s) 200, 237, 473, 1157, 1328, 1574, 2460
GluI GCNGC 5 cut(s) 60, 610, 685, 1072, 2178
GsuI CTGGAG 4 cut(s) 740, 1480, 1653, 1908
HaeIII GGCC 5 cut(s) 757, 1278, 1649, 1929, 2467
HapII CCGG 5 cut(s) 372, 1506, 2130, 2230, 2378
HgaI GACGC 2 cut(s) 885, 1571
Hin1I GRCGYC 2 cut(s) 1582, 2418
Hin1II CATG 7 cut(s) 217, 511, 853, 1198, 1492, 1969, 2204
HincII GTYRAC 2 cut(s) 1162, 2403
HindII GTYRAC 2 cut(s) 1162, 2403
HpaII CCGG 5 cut(s) 372, 1506, 2130, 2230, 2378
HphI GGTGA 3 cut(s) 1520, 2111, 2677
Hpy166II GTNNAC 5 cut(s) 84, 1162, 1986, 2403, 2727
Hpy8I GTNNAC 5 cut(s) 84, 1162, 1986, 2403, 2727
HpyAV CCTTC 8 cut(s) 158, 292, 468, 702, 774, 1007, 1433, 2457
HpyCH4III ACNGT 6 cut(s) 73, 627, 1015, 1034, 1298, 2400
HpyCH4IV ACGT 3 cut(s) 251, 1365, 2418
HpyF10VI GCNNNNNNNGC 6 cut(s) 174, 2008, 2065, 2174, 2282, 2473
HpyF3I CTNAG 7 cut(s) 258, 773, 786, 1234, 1445, 1559, 2406
HpySE526I ACGT 3 cut(s) 251, 1365, 2418
Hsp92I GRCGYC 2 cut(s) 1582, 2418
Hsp92II CATG 7 cut(s) 217, 511, 853, 1198, 1492, 1969, 2204
Kpn2I TCCGGA 2 cut(s) 2129, 2377
Ksp22I TGATCA 1 cut(s) 1510
LguI GCTCTTC 1 cut(s) 1830
LmnI GCTCC 6 cut(s) 1135, 1461, 1689, 1814, 2007, 2446
Lsp1109I GCAGC 4 cut(s) 621, 696, 1083, 2189
LweI GCATC 6 cut(s) 177, 198, 323, 696, 883, 1316
MabI ACCWGGT 1 cut(s) 547
MaeI CTAG 7 cut(s) 200, 237, 473, 1157, 1328, 1574, 2460
MaeII ACGT 3 cut(s) 251, 1365, 2418
MaeIII GTNAC 1 cut(s) 2414
MbiI CCGCTC 1 cut(s) 1755
MboII GAAGA 9 cut(s) 1324, 1741, 1751, 1847, 1910, 2166, 2189, 2422, 2639
MfeI CAATTG 5 cut(s) 318, 803, 910, 1076, 1668
MflI RGATCY 4 cut(s) 395, 1271, 1883, 2374
MhlI GDGCHC 5 cut(s) 1140, 1466, 1686, 1842, 2004
MlsI TGGCCA 1 cut(s) 1278
MluNI TGGCCA 1 cut(s) 1278
MlyI GAGTC 4 cut(s) 1192, 1456, 1564, 2386
MmeI TCCRAC 4 cut(s) 834, 1946, 2121, 2424
Mox20I TGGCCA 1 cut(s) 1278
MroI TCCGGA 2 cut(s) 2129, 2377
MscI TGGCCA 1 cut(s) 1278
MseI TTAA 9 cut(s) 347, 563, 749, 944, 1944, 2270, 2352, 2633, 2715
MslI CAYNNNNRTG 1 cut(s) 1493
Msp20I TGGCCA 1 cut(s) 1278
MspI CCGG 5 cut(s) 372, 1506, 2130, 2230, 2378
MspR9I CCNGG 4 cut(s) 549, 1280, 1358, 2231
MunI CAATTG 5 cut(s) 318, 803, 910, 1076, 1668
Mva1269I GAATGC 1 cut(s) 612
MvaI CCWGG 3 cut(s) 549, 1280, 1358
MvnI CGCG 1 cut(s) 2011
MwoI GCNNNNNNNGC 6 cut(s) 174, 2008, 2065, 2174, 2282, 2473
NciI CCSGG 1 cut(s) 2231
NlaIII CATG 7 cut(s) 217, 511, 853, 1198, 1492, 1969, 2204
NlaIV GGNNCC 4 cut(s) 1060, 1463, 1600, 2376
NmeAIII GCCGAG 1 cut(s) 2017
NmuCI GTSAC 1 cut(s) 2414
NruI TCGCGA 1 cut(s) 2011
NspI RCATGY 1 cut(s) 511
PagI TCATGA 1 cut(s) 2200
PciSI GCTCTTC 1 cut(s) 1830
PcsI WCGNNNNNNNCGW 1 cut(s) 13
PctI GAATGC 1 cut(s) 612
PfeI GAWTC 9 cut(s) 268, 274, 518, 854, 1153, 1433, 1961, 2026, 2133
PflMI CCANNNNNTGG 1 cut(s) 868
PkrI GCNGC 5 cut(s) 61, 611, 686, 1073, 2179
PleI GAGTC 4 cut(s) 1191, 1455, 1564, 2386
PpsI GAGTC 4 cut(s) 1191, 1455, 1564, 2386
PpuMI RGGWCCY 1 cut(s) 292
PshBI ATTAAT 2 cut(s) 944, 2715
Psp124BI GAGCTC 2 cut(s) 1842, 2004
Psp5II RGGWCCY 1 cut(s) 292
Psp6I CCWGG 3 cut(s) 547, 1278, 1356
PspGI CCWGG 3 cut(s) 547, 1278, 1356
PspN4I GGNNCC 4 cut(s) 1060, 1463, 1600, 2376
PspPI GGNCC 8 cut(s) 292, 446, 493, 755, 827, 1598, 1799, 2332
PspPPI RGGWCCY 1 cut(s) 292
PstI CTGCAG 1 cut(s) 1098
PstNI CAGNNNCTG 1 cut(s) 271
PsuI RGATCY 4 cut(s) 395, 1271, 1883, 2374
RruI TCGCGA 1 cut(s) 2011
RsaI GTAC 7 cut(s) 651, 729, 762, 1045, 2016, 2502, 2534
RsaNI GTAC 7 cut(s) 650, 728, 761, 1044, 2015, 2501, 2533
RseI CAYNNNNRTG 1 cut(s) 1493
SacI GAGCTC 2 cut(s) 1842, 2004
SapI GCTCTTC 1 cut(s) 1830
SaqAI TTAA 9 cut(s) 347, 563, 749, 944, 1944, 2270, 2352, 2633, 2715
SatI GCNGC 5 cut(s) 60, 610, 685, 1072, 2178
Sau96I GGNCC 8 cut(s) 292, 446, 493, 755, 827, 1598, 1799, 2332
ScaI AGTACT 1 cut(s) 729
SchI GAGTC 4 cut(s) 1192, 1456, 1564, 2386
ScrFI CCNGG 4 cut(s) 549, 1280, 1358, 2231
SduI GDGCHC 5 cut(s) 1140, 1466, 1686, 1842, 2004
SexAI ACCWGGT 1 cut(s) 547
SfaNI GCATC 6 cut(s) 177, 198, 323, 696, 883, 1316
SfcI CTRYAG 4 cut(s) 263, 1094, 1267, 2422
SinI GGWCC 7 cut(s) 292, 446, 493, 827, 1598, 1799, 2332
SmiI ATTTAAAT 1 cut(s) 2271
SmiMI CAYNNNNRTG 1 cut(s) 1493
SmlI CTYRAG 2 cut(s) 1841, 2346
SmoI CTYRAG 2 cut(s) 1841, 2346
SsiI CCGC 3 cut(s) 59, 228, 1755
SspI AATATT 2 cut(s) 2073, 2384
SspMI CTAG 7 cut(s) 200, 237, 473, 1157, 1328, 1574, 2460
SstI GAGCTC 2 cut(s) 1842, 2004
StyD4I CCNGG 4 cut(s) 547, 1278, 1356, 2229
SwaI ATTTAAAT 1 cut(s) 2271
TaaI ACNGT 6 cut(s) 73, 627, 1015, 1034, 1298, 2400
TaiI ACGT 3 cut(s) 254, 1368, 2421
TaqI TCGA 6 cut(s) 75, 310, 767, 1760, 2259, 2522
TatI WGTACW 2 cut(s) 727, 2014
TauI GCSGC 1 cut(s) 62
TfiI GAWTC 9 cut(s) 268, 274, 518, 854, 1153, 1433, 1961, 2026, 2133
Tru1I TTAA 9 cut(s) 347, 563, 749, 944, 1944, 2270, 2352, 2633, 2715
Tru9I TTAA 9 cut(s) 347, 563, 749, 944, 1944, 2270, 2352, 2633, 2715
TscAI CASTG 4 cut(s) 1020, 1449, 1795, 2367
TseFI GTSAC 1 cut(s) 2414
TseI GCWGC 4 cut(s) 609, 684, 1071, 2177
Tsp45I GTSAC 1 cut(s) 2414
TspDTI ATGAA 7 cut(s) 572, 735, 1115, 1580, 2189, 2217, 2551
TspRI CASTG 4 cut(s) 1020, 1449, 1795, 2367
Van91I CCANNNNNTGG 1 cut(s) 868
VpaK11BI GGWCC 7 cut(s) 292, 446, 493, 827, 1598, 1799, 2332
VspI ATTAAT 2 cut(s) 944, 2715
XapI RAATTY 1 cut(s) 742
XbaI TCTAGA 1 cut(s) 1573
XceI RCATGY 1 cut(s) 511
XmiI GTMKAC 1 cut(s) 83
XspI CTAG 7 cut(s) 200, 237, 473, 1157, 1328, 1574, 2460
ZraI GACGTC 1 cut(s) 2419
ZrmI AGTACT 1 cut(s) 729
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.