Rh7CG334400

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000487
Physical Location & Seq
Forward (+)
37128711 .. 37176290
47580 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG334400.1

Sequence Viewer

Length: 2007 bp
ATGCTATTTTCATGTCCTTCTCCTGATGTGCAGGCTGCAAATATTGTTTGCTCAAGCATACAGCCCCTTCTGAATCTGGCAGTACTGAATTATATAGAAGAAAGGGTTAGTCCAGATGCAAAAATTGAATGGGCTAAAGTTCATATTGGGAAAGGTTTTGCAGCACTTGAAGATCTACTGAAAAACTATGCAGGAAGATATGCAATTGGAGATGAAGTTTGTTTTGCAGATTTGTTCCTGGCGCCCCAGATTGATGCATCTTTTACAAGGTTCAATCTAGACATGGTGTTTCTGCTTCTTATATTCACGCCTTTTCTCGTTTTAGCAAACCATGAGACAAGTTCTCTGGATGTTACTGGTTTAAAGTCTCTAAGGGCACAATGGACTAACACGCCTCCAAGTTGGGGGACTCTGGATCCTTGTGAAGATGGTTGGGATGGCATTGGGTGTCACAACATGCGTGTGGTCTCTTTAACATTACCGAGTATGAATTTGACTGGCACACTCTCTGGAGATATTGGACAGTTATCTGAACTACAAGTTTTGGATCTATCTTACAACAAGGGCCTGACAGGACCACTCCCAGGAGAAATTAGCAGTTTGAAGAAGCTATCTAACATAATTCTGGTTGGTTGCGGCTTCTCTGGTCCCATACCTCCTACTATAGGGTCCCTCCAGGAGCTAATATTTCTGTCTCTGAATTCTAACGGATTTAGTGGGAGCATCCCATCTTCCATTGGTAATCTGTCTAAACTATATTGGCTGGATCTAGCTGACAACCACCTTGATGGACCCATCCCAGTTTCTCATGGTGGTGAACCTGGTCTTGACATGCTCAGTCATTGCAAGCACTTTCATCTCGGAATGAATAAGCTCTCAGGCCCAATTCCATCAAAGCTTTTTAGCTCAAACATGAGCCTGATACATGTGCTCTTCGAAAGTAATAAACTCACTGGCAGCATCCCTTCCAGCCTTGGACTTGTAACGTCTTTGGAGGTTGTGCGATTTGATGGAAACATGTTAACTGGGCCTATTCCTCTGAGCCTCAACAGTCTTACAAATGTTTCTCAGCTGTTCTTGTCTAATAACAAGCTGAGCGGCCCTGCTCCCAACCTTACTGGCATGAATCTTCTCCATTATGTAGATTTGAGCAATAATAGTTTCGACGTGTCTGATGTTCCACCATGGTTTTCAACACTAGAGTCTTTGACCACATTAATGATGGAGAACACACAACTTCAAGGAGAAATACCTGCTGCTCTATTCAGCCTTTTAAACCTACAGACTGTGGTCCTGAGGAACAACCAGCTCAATGGCACCTTGGATATTGGCACTACGAGCAGTCAATTGCAACTCATTGATTTACAAAAGAATTTAATTAGGGAATACGAAGAAAATGGAGGATACAATGGTACTTTAATACTTGCTCAAAATCCCGTTTGTGACGAAACTGGAGCGTCACCGAGTTACTGCAAGAGTTCACAATCATCTGATGTTGTCCCATATAAAACATTGCCAAATAACTGTATAGCCAGTCCCTGCGGTTCTGATCAGGTTTCAAGCCCCAACTGTAAATGTGCATATCCATATGTGGGTACTCTAATCTTTAGAGCTCCTACCTTCTCAGACTTGAAAACCTCAACTCGCTACAAAGAGCTTGAGAAGAATCTCACTGATTCTTTCTTGTCCCATAAACTTGGAGTCGATTCAGTCGCTTTGAGTAACCTCACCAAGGATTCGCATGCATACCTTAGTATGAACCTAGAAGTATTCCCACAAAGCCAAGATCGTTTCAATAGAAAGGAAGTTTCTATTATTGCTTTTCTACTCAGTAACCAAACATTCAAGCCTCAAAAATCTTTTGGACCATTCTATTTCATTGGTGATGATTATCAACACTTTGCAGGTGATTGCTTATTAAGTTTCCATACAGAAGGAAATAGATTTCCCAATTTTTTTTTTTTTTTTTATGTTGATGCATCTTTCTTTCTGTTTCTCTTCTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 Pkinase Pkinase_Tyr

Protein Analysis

668

Amino Acids

73.09

Weight (kDa)

5.04

Isoelectric Point (pI)

36.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 151 - 257 4.4e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1895
Acc36I ACCTGC 2 cut(s) 1261, 1895
AccB1I GGYRCC 2 cut(s) 241, 1316
AccBSI CCGCTC 1 cut(s) 1098
AciI CCGC 3 cut(s) 636, 1098, 1542
AclWI GGATC 4 cut(s) 410, 423, 555, 774
AcsI RAATTY 3 cut(s) 490, 700, 1372
AcyI GRCGYC 1 cut(s) 242
AfaI GTAC 3 cut(s) 84, 1414, 1597
AfiI CCNNNNNNNGG 5 cut(s) 404, 584, 665, 1592, 1732
AflIII ACRYGT 3 cut(s) 925, 1017, 1167
AjiI CACGTC 1 cut(s) 1168
AjnI CCWGG 4 cut(s) 237, 583, 675, 820
Alw21I GWGCWC 2 cut(s) 933, 1615
Alw26I GTCTC 4 cut(s) 329, 372, 472, 699
AlwI GGATC 4 cut(s) 410, 423, 555, 774
AlwNI CAGNNNCTG 1 cut(s) 1539
AoxI GGCC 4 cut(s) 565, 880, 1028, 1099
ApeKI GCWGC 4 cut(s) 35, 161, 957, 1256
ApoI RAATTY 3 cut(s) 490, 700, 1372
AseI ATTAAT 1 cut(s) 1217
AspLEI GCGC 1 cut(s) 244
AsuHPI GGTGA 5 cut(s) 827, 1452, 1720, 1895, 1919
AsuII TTCGAA 1 cut(s) 936
AvaII GGWCC 6 cut(s) 575, 647, 669, 791, 1291, 1865
AxyI CCTNAGG 1 cut(s) 1295
BaeGI GKGCMC 1 cut(s) 379
BaeI ACNNNNGTAYC 2 cut(s) 1396, 1429
BamHI GGATCC 1 cut(s) 415
BanI GGYRCC 2 cut(s) 241, 1316
BanII GRGCYC 1 cut(s) 1615
Bbv12I GWGCWC 2 cut(s) 933, 1615
BbvI GCAGC 4 cut(s) 22, 173, 969, 1243
BccI CCATC 8 cut(s) 422, 431, 736, 782, 803, 898, 1004, 1216
BciT130I CCWGG 4 cut(s) 239, 585, 677, 822
BciVI GTATCC 1 cut(s) 1397
BclI TGATCA 1 cut(s) 1549
BcoDI GTCTC 4 cut(s) 329, 372, 472, 699
BfaI CTAG 4 cut(s) 278, 770, 1199, 1763
BfmI CTRYAG 2 cut(s) 663, 1280
BfoI RGCGCY 1 cut(s) 245
BfuAI ACCTGC 2 cut(s) 1261, 1895
BfuI GTATCC 1 cut(s) 1397
BglII AGATCT 1 cut(s) 172
BisI GCNGC 6 cut(s) 36, 162, 637, 958, 1099, 1257
BlpI GCTNAGC 1 cut(s) 1094
BlsI GCNGC 6 cut(s) 37, 163, 638, 959, 1100, 1258
BmcAI AGTACT 1 cut(s) 84
Bme1390I CCNGG 4 cut(s) 239, 585, 677, 822
Bme18I GGWCC 6 cut(s) 575, 647, 669, 791, 1291, 1865
BmgBI CACGTC 1 cut(s) 1168
BmiI GGNNCC 7 cut(s) 243, 417, 649, 670, 671, 793, 1318
BmrFI CCNGG 4 cut(s) 239, 585, 677, 822
BmrI ACTGGG 2 cut(s) 794, 1035
BmsI GCATC 7 cut(s) 106, 244, 266, 732, 969, 1966, 1988
BmuI ACTGGG 2 cut(s) 794, 1035
BoxI GACNNNNGTC 1 cut(s) 1289
BpmI CTGGAG 3 cut(s) 531, 659, 1473
Bpu1102I GCTNAGC 1 cut(s) 1094
Bpu14I TTCGAA 1 cut(s) 936
BpuEI CTTGAG 2 cut(s) 37, 1679
BsaBI GATNNNNATC 1 cut(s) 1890
BsaHI GRCGYC 1 cut(s) 242
BsaI GGTCTC 1 cut(s) 472
BsaJI CCNNGG 5 cut(s) 583, 973, 1184, 1320, 1731
BsaXI ACNNNNNCTCC 2 cut(s) 201, 231
Bsc4I CCNNNNNNNGG 5 cut(s) 404, 584, 665, 1592, 1732
Bse1I ACTGG 8 cut(s) 361, 502, 800, 958, 1030, 1123, 1456, 1533
Bse21I CCTNAGG 1 cut(s) 1295
Bse3DI GCAATG 2 cut(s) 841, 1511
Bse8I GATNNNNATC 1 cut(s) 1890
BseBI CCWGG 4 cut(s) 239, 585, 677, 822
BseDI CCNNGG 5 cut(s) 583, 973, 1184, 1320, 1731
BseGI GGATG 5 cut(s) 355, 442, 723, 795, 960
BseJI GATNNNNATC 1 cut(s) 1890
BseLI CCNNNNNNNGG 5 cut(s) 404, 584, 665, 1592, 1732
BseMI GCAATG 2 cut(s) 841, 1511
BseMII CTCAG 8 cut(s) 850, 891, 1031, 1082, 1085, 1286, 1638, 1843
BseNI ACTGG 8 cut(s) 361, 502, 800, 958, 1030, 1123, 1456, 1533
BseSI GKGCMC 1 cut(s) 379
BseXI GCAGC 4 cut(s) 22, 173, 969, 1243
BsgI GTGCAG 1 cut(s) 50
BshFI GGCC 4 cut(s) 567, 882, 1030, 1101
BshNI GGYRCC 2 cut(s) 241, 1316
BsiHKAI GWGCWC 2 cut(s) 933, 1615
BslFI GGGAC 6 cut(s) 421, 633, 655, 1484, 1521, 1672
BslI CCNNNNNNNGG 5 cut(s) 404, 584, 665, 1592, 1732
BsmAI GTCTC 4 cut(s) 329, 372, 472, 699
BsmFI GGGAC 6 cut(s) 421, 633, 655, 1484, 1521, 1672
BsnI GGCC 4 cut(s) 567, 882, 1030, 1101
Bso31I GGTCTC 1 cut(s) 472
Bsp119I TTCGAA 1 cut(s) 936
Bsp1286I GDGCHC 3 cut(s) 379, 933, 1615
Bsp143I GATC 6 cut(s) 172, 415, 547, 766, 1549, 1786
Bsp1720I GCTNAGC 1 cut(s) 1094
Bsp19I CCATGG 1 cut(s) 1184
BspACI CCGC 3 cut(s) 636, 1098, 1542
BspANI GGCC 4 cut(s) 567, 882, 1030, 1101
BspCNI CTCAG 8 cut(s) 849, 890, 1032, 1081, 1086, 1287, 1637, 1842
BspLI GGNNCC 7 cut(s) 243, 417, 649, 670, 671, 793, 1318
BspMI ACCTGC 2 cut(s) 1261, 1895
BspPI GGATC 4 cut(s) 410, 423, 555, 774
BspQI GCTCTTC 1 cut(s) 938
BspT104I TTCGAA 1 cut(s) 936
BspT107I GGYRCC 2 cut(s) 241, 1316
BspTNI GGTCTC 1 cut(s) 472
BsrBI CCGCTC 1 cut(s) 1098
BsrDI GCAATG 2 cut(s) 841, 1511
BsrI ACTGG 8 cut(s) 361, 502, 800, 958, 1030, 1123, 1456, 1533
BssECI CCNNGG 5 cut(s) 583, 973, 1184, 1320, 1731
BssMI GATC 6 cut(s) 172, 415, 547, 766, 1549, 1786
BssNI GRCGYC 1 cut(s) 242
BssT1I CCWWGG 4 cut(s) 973, 1184, 1320, 1731
Bst2UI CCWGG 4 cut(s) 239, 585, 677, 822
Bst4CI ACNGT 5 cut(s) 525, 1052, 1288, 1526, 1571
Bst6I CTCTTC 2 cut(s) 938, 2003
BstACI GRCGYC 1 cut(s) 242
BstBI TTCGAA 1 cut(s) 936
BstC8I GCNNGC 3 cut(s) 33, 848, 1743
BstDSI CCRYGG 1 cut(s) 1184
BstENI CCTNNNNNAGG 2 cut(s) 663, 1730
BstF5I GGATG 5 cut(s) 355, 442, 723, 795, 960
BstH2I RGCGCY 1 cut(s) 245
BstHHI GCGC 1 cut(s) 244
BstKTI GATC 6 cut(s) 175, 418, 550, 769, 1552, 1789
BstMAI GTCTC 4 cut(s) 329, 372, 472, 699
BstMBI GATC 6 cut(s) 172, 415, 547, 766, 1549, 1786
BstMWI GCNNNNNNNGC 1 cut(s) 1338
BstNI CCWGG 4 cut(s) 239, 585, 677, 822
BstNSI RCATGY 5 cut(s) 460, 835, 929, 1021, 1745
BstPAI GACNNNNGTC 1 cut(s) 1289
BstSCI CCNGG 4 cut(s) 237, 583, 675, 820
BstSFI CTRYAG 2 cut(s) 663, 1280
BstSLI GKGCMC 1 cut(s) 379
BstV1I GCAGC 4 cut(s) 22, 173, 969, 1243
BstX2I RGATCY 4 cut(s) 172, 415, 547, 766
BstXI CCANNNNNNTGG 3 cut(s) 788, 1313, 1697
BstYI RGATCY 4 cut(s) 172, 415, 547, 766
Bsu36I CCTNAGG 1 cut(s) 1295
BsuI GTATCC 1 cut(s) 1397
BsuRI GGCC 4 cut(s) 567, 882, 1030, 1101
BtgI CCRYGG 1 cut(s) 1184
BtrI CACGTC 1 cut(s) 1168
BtsCI GGATG 5 cut(s) 355, 442, 723, 795, 960
BtsIMutI CAGTG 2 cut(s) 951, 1671
BveI ACCTGC 2 cut(s) 1261, 1895
Cac8I GCNNGC 3 cut(s) 33, 848, 1743
CaiI CAGNNNCTG 1 cut(s) 1539
CfoI GCGC 1 cut(s) 244
CseI GACGC 1 cut(s) 1446
CsiI ACCWGGT 1 cut(s) 820
Csp6I GTAC 3 cut(s) 83, 1413, 1596
CviQI GTAC 3 cut(s) 83, 1413, 1596
DinI GGCGCC 1 cut(s) 243
DpnI GATC 6 cut(s) 174, 417, 549, 768, 1551, 1788
DpnII GATC 6 cut(s) 172, 415, 547, 766, 1549, 1786
DraI TTTAAA 2 cut(s) 363, 1275
Eam1104I CTCTTC 2 cut(s) 938, 2003
EarI CTCTTC 2 cut(s) 938, 2003
Ecl136II GAGCTC 1 cut(s) 1613
Eco130I CCWWGG 4 cut(s) 973, 1184, 1320, 1731
Eco24I GRGCYC 1 cut(s) 1615
Eco31I GGTCTC 1 cut(s) 472
Eco47I GGWCC 6 cut(s) 575, 647, 669, 791, 1291, 1865
Eco53kI GAGCTC 1 cut(s) 1613
Eco81I CCTNAGG 1 cut(s) 1295
EcoICRI GAGCTC 1 cut(s) 1613
EcoNI CCTNNNNNAGG 2 cut(s) 663, 1730
EcoO109I RGGNCCY 2 cut(s) 565, 669
EcoRI GAATTC 1 cut(s) 700
EcoRII CCWGG 4 cut(s) 237, 583, 675, 820
EcoT14I CCWWGG 4 cut(s) 973, 1184, 1320, 1731
EcoT22I ATGCAT 3 cut(s) 259, 1747, 1981
EcoT38I GRGCYC 1 cut(s) 1615
EgeI GGCGCC 1 cut(s) 243
EheI GGCGCC 1 cut(s) 243
ErhI CCWWGG 4 cut(s) 973, 1184, 1320, 1731
FaqI GGGAC 6 cut(s) 421, 633, 655, 1484, 1521, 1672
FauNDI CATATG 1 cut(s) 1588
FbaI TGATCA 1 cut(s) 1549
Fnu4HI GCNGC 6 cut(s) 36, 162, 637, 958, 1099, 1257
FokI GGATG 5 cut(s) 362, 449, 710, 782, 947
FriOI GRGCYC 1 cut(s) 1615
Fsp4HI GCNGC 6 cut(s) 36, 162, 637, 958, 1099, 1257
FspBI CTAG 4 cut(s) 278, 770, 1199, 1763
GlaI GCGC 1 cut(s) 243
GluI GCNGC 6 cut(s) 36, 162, 637, 958, 1099, 1257
GsuI CTGGAG 3 cut(s) 531, 659, 1473
HaeII RGCGCY 1 cut(s) 245
HaeIII GGCC 4 cut(s) 567, 882, 1030, 1101
HgaI GACGC 1 cut(s) 1446
HhaI GCGC 1 cut(s) 244
Hin1I GRCGYC 1 cut(s) 242
Hin6I GCGC 1 cut(s) 242
HinP1I GCGC 1 cut(s) 242
HincII GTYRAC 1 cut(s) 1023
HindII GTYRAC 1 cut(s) 1023
HindIII AAGCTT 1 cut(s) 896
HinfI GANTC 9 cut(s) 73, 409, 1126, 1202, 1666, 1676, 1701, 1706, 1736
HpaI GTTAAC 1 cut(s) 1023
HphI GGTGA 5 cut(s) 827, 1452, 1720, 1895, 1919
Hpy166II GTNNAC 3 cut(s) 818, 1023, 1481
Hpy188I TCNGA 9 cut(s) 72, 532, 699, 863, 1041, 1174, 1492, 1549, 1627
Hpy188III TCNNGA 8 cut(s) 23, 113, 278, 347, 413, 510, 827, 1294
Hpy8I GTNNAC 3 cut(s) 818, 1023, 1481
Hpy99I CGWCG 1 cut(s) 1169
HpyAV CCTTC 5 cut(s) 27, 77, 975, 1630, 1928
HpyCH4III ACNGT 5 cut(s) 525, 1052, 1288, 1526, 1571
HpyCH4IV ACGT 2 cut(s) 986, 1167
HpyF10VI GCNNNNNNNGC 1 cut(s) 1338
HpySE526I ACGT 2 cut(s) 986, 1167
Hsp92I GRCGYC 1 cut(s) 242
HspAI GCGC 1 cut(s) 242
KasI GGCGCC 1 cut(s) 241
KflI GGGWCCC 1 cut(s) 669
Ksp22I TGATCA 1 cut(s) 1549
KspAI GTTAAC 1 cut(s) 1023
Kzo9I GATC 6 cut(s) 172, 415, 547, 766, 1549, 1786
LguI GCTCTTC 1 cut(s) 938
LmnI GCTCC 5 cut(s) 679, 720, 1111, 1454, 1618
Lsp1109I GCAGC 4 cut(s) 22, 173, 969, 1243
LweI GCATC 7 cut(s) 106, 244, 266, 732, 969, 1966, 1988
MabI ACCWGGT 1 cut(s) 820
MaeI CTAG 4 cut(s) 278, 770, 1199, 1763
MaeII ACGT 2 cut(s) 986, 1167
MaeIII GTNAC 8 cut(s) 352, 449, 982, 1442, 1458, 1466, 1721, 1832
MalI GATC 6 cut(s) 174, 417, 549, 768, 1551, 1788
MbiI CCGCTC 1 cut(s) 1098
MboI GATC 6 cut(s) 172, 415, 547, 766, 1549, 1786
MfeI CAATTG 2 cut(s) 204, 1346
MflI RGATCY 4 cut(s) 172, 415, 547, 766
MhlI GDGCHC 3 cut(s) 379, 933, 1615
Mly113I GGCGCC 1 cut(s) 242
MlyI GAGTC 3 cut(s) 403, 1211, 1710
Mph1103I ATGCAT 3 cut(s) 259, 1747, 1981
MseI TTAA 8 cut(s) 362, 473, 1022, 1217, 1274, 1376, 1418, 1919
MslI CAYNNNNRTG 4 cut(s) 461, 786, 813, 1217
MspA1I CMGCKG 1 cut(s) 1072
MspR9I CCNGG 4 cut(s) 239, 585, 677, 822
MunI CAATTG 2 cut(s) 204, 1346
MvaI CCWGG 4 cut(s) 239, 585, 677, 822
MwoI GCNNNNNNNGC 1 cut(s) 1338
NarI GGCGCC 1 cut(s) 242
NcoI CCATGG 1 cut(s) 1184
NdeI CATATG 1 cut(s) 1588
NdeII GATC 6 cut(s) 172, 415, 547, 766, 1549, 1786
NlaIV GGNNCC 7 cut(s) 243, 417, 649, 670, 671, 793, 1318
NmuCI GTSAC 3 cut(s) 449, 1442, 1458
NsiI ATGCAT 3 cut(s) 259, 1747, 1981
NspI RCATGY 5 cut(s) 460, 835, 929, 1021, 1745
NspV TTCGAA 1 cut(s) 936
PaeI GCATGC 1 cut(s) 1745
PaqCI CACCTGC 1 cut(s) 1895
PciI ACATGT 2 cut(s) 925, 1017
PciSI GCTCTTC 1 cut(s) 938
PfeI GAWTC 6 cut(s) 73, 1126, 1666, 1676, 1706, 1736
PfoI TCCNGGA 1 cut(s) 675
PkrI GCNGC 6 cut(s) 37, 163, 638, 959, 1100, 1258
PleI GAGTC 3 cut(s) 403, 1210, 1709
PluTI GGCGCC 1 cut(s) 245
PpsI GAGTC 3 cut(s) 403, 1210, 1709
PpuMI RGGWCCY 1 cut(s) 669
PscI ACATGT 2 cut(s) 925, 1017
PshAI GACNNNNGTC 1 cut(s) 1289
PshBI ATTAAT 1 cut(s) 1217
Psp124BI GAGCTC 1 cut(s) 1615
Psp5II RGGWCCY 1 cut(s) 669
Psp6I CCWGG 4 cut(s) 237, 583, 675, 820
PspGI CCWGG 4 cut(s) 237, 583, 675, 820
PspN4I GGNNCC 7 cut(s) 243, 417, 649, 670, 671, 793, 1318
PspPPI RGGWCCY 1 cut(s) 669
PstNI CAGNNNCTG 1 cut(s) 1539
PsuI RGATCY 4 cut(s) 172, 415, 547, 766
PvuII CAGCTG 1 cut(s) 1072
RsaI GTAC 3 cut(s) 84, 1414, 1597
RsaNI GTAC 3 cut(s) 83, 1413, 1596
RseI CAYNNNNRTG 4 cut(s) 461, 786, 813, 1217
SacI GAGCTC 1 cut(s) 1615
SapI GCTCTTC 1 cut(s) 938
SaqAI TTAA 8 cut(s) 362, 473, 1022, 1217, 1274, 1376, 1418, 1919
SatI GCNGC 6 cut(s) 36, 162, 637, 958, 1099, 1257
Sau3AI GATC 6 cut(s) 172, 415, 547, 766, 1549, 1786
ScaI AGTACT 1 cut(s) 84
SchI GAGTC 3 cut(s) 403, 1211, 1710
ScrFI CCNGG 4 cut(s) 239, 585, 677, 822
SduI GDGCHC 3 cut(s) 379, 933, 1615
SexAI ACCWGGT 1 cut(s) 820
SfaNI GCATC 7 cut(s) 106, 244, 266, 732, 969, 1966, 1988
SfcI CTRYAG 2 cut(s) 663, 1280
SfoI GGCGCC 1 cut(s) 243
SfuI TTCGAA 1 cut(s) 936
SinI GGWCC 6 cut(s) 575, 647, 669, 791, 1291, 1865
SmiMI CAYNNNNRTG 4 cut(s) 461, 786, 813, 1217
SmlI CTYRAG 2 cut(s) 52, 1658
SmoI CTYRAG 2 cut(s) 52, 1658
SphI GCATGC 1 cut(s) 1745
SsiI CCGC 3 cut(s) 636, 1098, 1542
SspDI GGCGCC 1 cut(s) 241
SspI AATATT 2 cut(s) 43, 687
SspMI CTAG 4 cut(s) 278, 770, 1199, 1763
SstI GAGCTC 1 cut(s) 1615
StyD4I CCNGG 4 cut(s) 237, 583, 675, 820
StyI CCWWGG 4 cut(s) 973, 1184, 1320, 1731
TaaI ACNGT 5 cut(s) 525, 1052, 1288, 1526, 1571
TaiI ACGT 2 cut(s) 989, 1170
TaqI TCGA 3 cut(s) 936, 1164, 1704
TatI WGTACW 1 cut(s) 82
TauI GCSGC 2 cut(s) 639, 1101
TfiI GAWTC 6 cut(s) 73, 1126, 1666, 1676, 1706, 1736
Tru1I TTAA 8 cut(s) 362, 473, 1022, 1217, 1274, 1376, 1418, 1919
Tru9I TTAA 8 cut(s) 362, 473, 1022, 1217, 1274, 1376, 1418, 1919
TscAI CASTG 2 cut(s) 958, 1678
TseFI GTSAC 3 cut(s) 449, 1442, 1458
TseI GCWGC 4 cut(s) 35, 161, 957, 1256
Tsp45I GTSAC 3 cut(s) 449, 1442, 1458
TspDTI ATGAA 8 cut(s) 131, 228, 503, 845, 881, 1139, 1772, 1867
TspGWI ACGGA 1 cut(s) 723
TspRI CASTG 2 cut(s) 958, 1678
VpaK11BI GGWCC 6 cut(s) 575, 647, 669, 791, 1291, 1865
VspI ATTAAT 1 cut(s) 1217
XagI CCTNNNNNAGG 2 cut(s) 663, 1730
XapI RAATTY 3 cut(s) 490, 700, 1372
XbaI TCTAGA 1 cut(s) 277
XceI RCATGY 5 cut(s) 460, 835, 929, 1021, 1745
XcmI CCANNNNNNNNNTGG 1 cut(s) 1219
XspI CTAG 4 cut(s) 278, 770, 1199, 1763
ZrmI AGTACT 1 cut(s) 84
Zsp2I ATGCAT 3 cut(s) 259, 1747, 1981
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.