Rw7G026960

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000487
Physical Location & Seq
Forward (+)
34471503 .. 34477798
6296 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G026960.1

Sequence Viewer

Length: 2859 bp
ATGGATCATAGAATTCAGGTGTTTCTGCTTCTTATATTCACGCCTTTTCTCGTTTTAGCAAACCATGAGACAAGTCCTCTGGATGTTACTGGTTTAAAGTCTCTTAGGGACCTATGGACCAACACGCCTCCAAGTTGGGGGACTCTGGATCCTTGTGATGGTTGGGATGGCATTGGGTGTCACAACATGCGTGTGGTCTCTTTAACATTACCGAGTATGAATTTGACTGGCACACTCTCTGGAGATATTGAACAGTTATCTGAACTACAAGTTTTGGATCTATCTTACAACAAGGGCCTGACAGGACCACTCCCAGGAAAAATTAGCAGTTTGAAGAAGCTAACTAACATAATTCTGGTTGGTTGCGGCTTCTCTGGTCCCATACCTCCTACTATAGGGTCCCTACAGGAGCTAATATTTCTGTCTCTGAATTCTAACGGATTTAGTGGGAGCATCCCATCTTCCATTGGTAATCTGTCTAAACTATATTGGCTGGATCTAGCTGACAACGACCTTGATGGACCCATCCCAGTTTCTCATGGTGGTGAACCTGGTCTTGACATGCTCAGTCATTGCAAGCACTTTCATCTCGGAATGAATAAGCTCTCAGGCCCAATTCCATCAAAGCTTTTTAGCTCAAACATGAGCCTGATACATGTGCTCTTCGAAAGTAATAGACTCACTGGCAGCATCCCTTCCAGCCTTGGACTTGTAACGTCTTTGGAGGTTGTGCGATTTGATGGAAACATGTTAACTGGGCCTATTCCTCTGAGCCTCAACAGTCTTACAAATGTTTCTCAGCTGTTCTTGTCTAATAACAAGCTGAGCGGCCCTGCTCCCAACCTTACTGGCATGAATCTTCTCCATTATGTAGATTTGAGCAATAATAGTTTCGACAGGCCTGATGTTCCACCATGGTTTTCAACACTAGAGTCTTTGACCACATTAATGATGGAGGACACACAACTTCAAGGAGAAATACCTGCTGCTCTATTCAGCCTTTCAAACCTACAGACTGTGGTACTGAGGACCAACCAGCTCAATGGCACCTTGGATATTGGCACTACGAGCAGTCAATTGCAACTCATTGATTTACAAAAGAATTCAATTGTGGAATACGAAGAAACTGGAGGATTCGCTGGTACTTTAATACTTGCTCAAAATCCCGTTTGTGACGAAACTGGAGCGTCACAGAGTTACTGCAAGAGTTCACAATCATCTGATGTTGTCCCATATAAAACATTGCCAAATAACTGTATACCCAGTCCCTGCGGTTCTGATCAGGTTTCAAGCCCCAACTGTAAATGTGCATATCCATATGTGGGTACTCTAATGTTTAGAGCTCCTACCTTCTCAGACTTGAAAACCTCAACTCGCTACAAAGACCTTGAGAAGAATCTCACTGATTCTTTCTTGTCCAATAATCTTGGAGTCGATTCAGTCGCTTTGAGTAACCTCACCAAGGATTCGCATGCGTACCTTAGTATGAGCCTAGAAGTATTCCCACAAAGCCAAGATCGTTTCAATAGAAATGAAGTTTCTATTATTGCTTTTCTACTCAGTAACCAAACATTCAAGCCTCAAAAATCTTTTGGACCATTCTATTTCATTGGTGATGATTATCAACACTTTGCAGAAACGACACAATCAGAATCAAACAAATCGTCTAATGTGGGCATTATTATTGGAGCAGCAGCTGGTGGTTCTGTTCTTGTGCTAATATTACTCCTTGTAGGAATTTATGCTATTCGCCAGAAGAGAAGGGCAAAAAGGGCCACTGATCAAAACAATCCTTTTGGCAAATGGGATGTGAATAATAAGACCAGAGGTAGCACTCCCCAATTAAAGGGGGCTAGATCGTTCTCTTTTGAAGAGCTCATGAAATACAGCAACAAGTTTTCAGAAGCAAATGATGTTGGATATGGGGGCTATGGGAAGGTTTACCGTGGAACTCTTCCCACAGGGCAACTGATTGCCATCAAACGAGCTCACAAAGAATCTATCCAAGGTGGAAATGAGTTCAAAACTGAGATTGAACTTCTTTCACGGGTTCATCATAAGCACCTTGTCAGCCTTGTAGGATTTTGTTTTGACCGAGGTGAGCAGATGCTGGTGTATGAGTATGTAGCAAATGGGACTCTTAAGGATAGTCTTTCAGGTAAGTCAGGAATCAGATTAGATTGGCAGAGGAGACTTAAAATAGCACTTGGTGCAGCTAGAGGCTTAGCCTATCTTCATGAACTTTGCGACCCTCCAATTATACACAGAGATATAAAATCAACTAATGTTCTGTTGGACAACCGCTTGAATGCAAAAGTTGCTGATTTTGGTCTCTGCAAGTCCATGGGTAATAGTGGAAGGGATCATGTCTCCACTCAAGTTAAAGGGACAATGGGATACATGGATCCTGAATATTACATGACCCAGCGATTGACTGAGAAGAGTGATGTTTATGGTTTTGGAGTGCTAATGTTGGAGCTACTTACTGCAAGGAAACCGATAGAACAAGGAAAATATATCGTGCGAGAAGTAAGGATGGCAATGGATAAGACTAAGGATTTATACAACCTTCATGTAATCCTGGATTCAGCCATTGGTTTGGGAACGACACTCAAAGGTTTAGAGAGGTTTGTGGATCTTGCAATGACGTGTGTTGAAGAAGAAGGAGCCAACAGGCCTACTATGAGTGAGGTGGTAAAAGAGATTGAAAACATTATGCAGCTTGCTGGTCTGAACCCTAATGCTGAGTCGGCATCCACTTCCGCAAGCTATGAGGAGGCAAGCTCTAAGCATCCTTACAGCAATGAGGCCTTTGATTATAGTGGAGTATTTCCAGCTTCAAAGATAGAGCCGCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 Pkinase Pkinase_Tyr

Protein Analysis

952

Amino Acids

104.34

Weight (kDa)

5.97

Isoelectric Point (pI)

35.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 63 - 168 6.5e-06 Leucine-rich repeat region
Pkinase PF00069 635 - 900 3.6e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 637 - 901 1.8e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 991
AccB1I GGYRCC 1 cut(s) 1046
AccBSI CCGCTC 1 cut(s) 828
AccI GTMKAC 1 cut(s) 1258
AciI CCGC 6 cut(s) 366, 828, 1272, 2302, 2763, 2852
AclWI GGATC 9 cut(s) 12, 143, 156, 285, 504, 2370, 2399, 2412, 2643
AcsI RAATTY 5 cut(s) 12, 220, 430, 1102, 1737
AdeI CACNNNGTG 1 cut(s) 2210
AfaI GTAC 4 cut(s) 1023, 1144, 1327, 1478
AfiI CCNNNNNNNGG 7 cut(s) 137, 158, 314, 395, 1322, 1462, 1846
AflII CTTAAG 1 cut(s) 2141
AflIII ACRYGT 3 cut(s) 655, 747, 2648
AjiI CACGTC 1 cut(s) 2649
AjnI CCWGG 3 cut(s) 313, 550, 2580
Alw21I GWGCWC 4 cut(s) 663, 1345, 1878, 1990
Alw26I GTCTC 7 cut(s) 62, 105, 202, 429, 2185, 2336, 2374
AlwI GGATC 9 cut(s) 12, 143, 156, 285, 504, 2370, 2399, 2412, 2643
AlwNI CAGNNNCTG 3 cut(s) 1269, 1697, 2110
AoxI GGCC 8 cut(s) 295, 610, 758, 829, 899, 1773, 2675, 2808
ApeKI GCWGC 6 cut(s) 687, 986, 1691, 1694, 2213, 2719
ApoI RAATTY 5 cut(s) 12, 220, 430, 1102, 1737
ArsI GACNNNNNNTTYG 2 cut(s) 1649, 1681
AseI ATTAAT 1 cut(s) 947
AsuHPI GGTGA 4 cut(s) 557, 1450, 1625, 2111
AsuII TTCGAA 1 cut(s) 666
AvaII GGWCC 8 cut(s) 109, 117, 305, 377, 399, 521, 1029, 1595
BamHI GGATCC 2 cut(s) 148, 2404
BanI GGYRCC 1 cut(s) 1046
BanII GRGCYC 3 cut(s) 1345, 1878, 1990
Bbv12I GWGCWC 4 cut(s) 663, 1345, 1878, 1990
BbvI GCAGC 6 cut(s) 699, 973, 1703, 1706, 2225, 2731
BciT130I CCWGG 3 cut(s) 315, 552, 2582
BciVI GTATCC 1 cut(s) 2390
BclI TGATCA 2 cut(s) 1279, 1780
BcoDI GTCTC 7 cut(s) 62, 105, 202, 429, 2185, 2336, 2374
BfaI CTAG 5 cut(s) 500, 929, 1493, 1854, 2217
BfmI CTRYAG 3 cut(s) 393, 404, 1010
BfrI CTTAAG 1 cut(s) 2141
BfuAI ACCTGC 1 cut(s) 991
BfuI GTATCC 1 cut(s) 2390
BisI GCNGC 9 cut(s) 367, 688, 829, 987, 1692, 1695, 2214, 2720, 2852
BlpI GCTNAGC 2 cut(s) 824, 2224
BlsI GCNGC 9 cut(s) 368, 689, 830, 988, 1693, 1696, 2215, 2721, 2853
Bme1390I CCNGG 3 cut(s) 315, 552, 2582
Bme18I GGWCC 8 cut(s) 109, 117, 305, 377, 399, 521, 1029, 1595
BmgBI CACGTC 1 cut(s) 2649
BmiI GGNNCC 9 cut(s) 110, 150, 379, 400, 401, 523, 1048, 2406, 2668
BmrFI CCNGG 3 cut(s) 315, 552, 2582
BmrI ACTGGG 3 cut(s) 524, 765, 1257
BmsI GCATC 5 cut(s) 462, 699, 2097, 2762, 2800
BmuI ACTGGG 3 cut(s) 524, 765, 1257
BplI GAGNNNNNCTC 2 cut(s) 2768, 2800
BpmI CTGGAG 3 cut(s) 261, 1149, 1203
Bpu1102I GCTNAGC 2 cut(s) 824, 2224
Bpu14I TTCGAA 1 cut(s) 666
BpuEI CTTGAG 2 cut(s) 1409, 2361
BsaBI GATNNNNATC 2 cut(s) 1620, 1976
BsaI GGTCTC 2 cut(s) 202, 2336
BsaJI CCNNGG 9 cut(s) 313, 703, 914, 1050, 1461, 1945, 2005, 2095, 2343
Bsc4I CCNNNNNNNGG 7 cut(s) 137, 158, 314, 395, 1322, 1462, 1846
Bse1I ACTGG 9 cut(s) 94, 232, 530, 688, 760, 853, 1132, 1186, 1263
Bse3DI GCAATG 5 cut(s) 571, 1241, 2547, 2649, 2809
Bse8I GATNNNNATC 2 cut(s) 1620, 1976
BseBI CCWGG 3 cut(s) 315, 552, 2582
BseDI CCNNGG 9 cut(s) 313, 703, 914, 1050, 1461, 1945, 2005, 2095, 2343
BseGI GGATG 9 cut(s) 88, 172, 453, 525, 690, 1813, 2541, 2753, 2791
BseJI GATNNNNATC 2 cut(s) 1620, 1976
BseLI CCNNNNNNNGG 7 cut(s) 137, 158, 314, 395, 1322, 1462, 1846
BseMI GCAATG 5 cut(s) 571, 1241, 2547, 2649, 2809
BseNI ACTGG 9 cut(s) 94, 232, 530, 688, 760, 853, 1132, 1186, 1263
BseRI GAGGAG 2 cut(s) 2203, 2789
BseXI GCAGC 6 cut(s) 699, 973, 1703, 1706, 2225, 2731
BseYI CCCAGC 1 cut(s) 2424
BsgI GTGCAG 1 cut(s) 2232
BshFI GGCC 8 cut(s) 297, 612, 760, 831, 901, 1775, 2677, 2810
BshNI GGYRCC 1 cut(s) 1046
BsiHKAI GWGCWC 4 cut(s) 663, 1345, 1878, 1990
BslFI GGGAC 8 cut(s) 122, 154, 363, 385, 1214, 1251, 2149, 2401
BslI CCNNNNNNNGG 7 cut(s) 137, 158, 314, 395, 1322, 1462, 1846
BsmAI GTCTC 7 cut(s) 62, 105, 202, 429, 2185, 2336, 2374
BsmFI GGGAC 8 cut(s) 122, 154, 363, 385, 1214, 1251, 2149, 2401
BsmI GAATGC 1 cut(s) 2314
BsnI GGCC 8 cut(s) 297, 612, 760, 831, 901, 1775, 2677, 2810
Bso31I GGTCTC 2 cut(s) 202, 2336
Bsp119I TTCGAA 1 cut(s) 666
Bsp1286I GDGCHC 4 cut(s) 663, 1345, 1878, 1990
Bsp1720I GCTNAGC 2 cut(s) 824, 2224
Bsp19I CCATGG 2 cut(s) 914, 2343
BspACI CCGC 6 cut(s) 366, 828, 1272, 2302, 2763, 2852
BspANI GGCC 8 cut(s) 297, 612, 760, 831, 901, 1775, 2677, 2810
BspHI TCATGA 2 cut(s) 1878, 2236
BspLI GGNNCC 9 cut(s) 110, 150, 379, 400, 401, 523, 1048, 2406, 2668
BspMI ACCTGC 1 cut(s) 991
BspPI GGATC 9 cut(s) 12, 143, 156, 285, 504, 2370, 2399, 2412, 2643
BspQI GCTCTTC 2 cut(s) 668, 1866
BspT104I TTCGAA 1 cut(s) 666
BspT107I GGYRCC 1 cut(s) 1046
BspTI CTTAAG 1 cut(s) 2141
BspTNI GGTCTC 2 cut(s) 202, 2336
BsrBI CCGCTC 1 cut(s) 828
BsrDI GCAATG 5 cut(s) 571, 1241, 2547, 2649, 2809
BsrI ACTGG 9 cut(s) 94, 232, 530, 688, 760, 853, 1132, 1186, 1263
BssECI CCNNGG 9 cut(s) 313, 703, 914, 1050, 1461, 1945, 2005, 2095, 2343
BssNAI GTATAC 1 cut(s) 1259
BssT1I CCWWGG 6 cut(s) 703, 914, 1050, 1461, 2005, 2343
Bst1107I GTATAC 1 cut(s) 1259
Bst2UI CCWGG 3 cut(s) 315, 552, 2582
Bst4CI ACNGT 6 cut(s) 255, 782, 1018, 1256, 1301, 1946
Bst6I CTCTTC 5 cut(s) 668, 1751, 1866, 1959, 2435
BstAFI CTTAAG 1 cut(s) 2141
BstAPI GCANNNNNTGC 2 cut(s) 2210, 2318
BstBI TTCGAA 1 cut(s) 666
BstC8I GCNNGC 5 cut(s) 578, 1473, 2724, 2767, 2782
BstDSI CCRYGG 3 cut(s) 914, 1945, 2343
BstENI CCTNNNNNAGG 2 cut(s) 393, 1460
BstF5I GGATG 9 cut(s) 88, 172, 453, 525, 690, 1813, 2541, 2753, 2791
BstMAI GTCTC 7 cut(s) 62, 105, 202, 429, 2185, 2336, 2374
BstMWI GCNNNNNNNGC 5 cut(s) 1068, 1772, 2210, 2318, 2750
BstNI CCWGG 3 cut(s) 315, 552, 2582
BstNSI RCATGY 5 cut(s) 190, 565, 659, 751, 1475
BstSCI CCNGG 3 cut(s) 313, 550, 2580
BstSFI CTRYAG 3 cut(s) 393, 404, 1010
BstV1I GCAGC 6 cut(s) 699, 973, 1703, 1706, 2225, 2731
BstX2I RGATCY 5 cut(s) 148, 277, 496, 2404, 2635
BstXI CCANNNNNNTGG 2 cut(s) 1043, 2599
BstYI RGATCY 5 cut(s) 148, 277, 496, 2404, 2635
BstZ17I GTATAC 1 cut(s) 1259
BsuI GTATCC 1 cut(s) 2390
BsuRI GGCC 8 cut(s) 297, 612, 760, 831, 901, 1775, 2677, 2810
BtgI CCRYGG 3 cut(s) 914, 1945, 2343
BtrI CACGTC 1 cut(s) 2649
BtsCI GGATG 9 cut(s) 88, 172, 453, 525, 690, 1813, 2541, 2753, 2791
BtsIMutI CAGTG 3 cut(s) 681, 1401, 1776
BveI ACCTGC 1 cut(s) 991
Cac8I GCNNGC 5 cut(s) 578, 1473, 2724, 2767, 2782
CaiI CAGNNNCTG 3 cut(s) 1269, 1697, 2110
CciI TCATGA 2 cut(s) 1878, 2236
CseI GACGC 1 cut(s) 1176
CsiI ACCWGGT 1 cut(s) 550
Csp6I GTAC 4 cut(s) 1022, 1143, 1326, 1477
CviQI GTAC 4 cut(s) 1022, 1143, 1326, 1477
DraI TTTAAA 1 cut(s) 96
DraIII CACNNNGTG 1 cut(s) 2210
Eam1104I CTCTTC 5 cut(s) 668, 1751, 1866, 1959, 2435
EarI CTCTTC 5 cut(s) 668, 1751, 1866, 1959, 2435
Ecl136II GAGCTC 3 cut(s) 1343, 1876, 1988
Eco130I CCWWGG 6 cut(s) 703, 914, 1050, 1461, 2005, 2343
Eco147I AGGCCT 3 cut(s) 901, 2677, 2810
Eco24I GRGCYC 3 cut(s) 1345, 1878, 1990
Eco31I GGTCTC 2 cut(s) 202, 2336
Eco47I GGWCC 8 cut(s) 109, 117, 305, 377, 399, 521, 1029, 1595
Eco53kI GAGCTC 3 cut(s) 1343, 1876, 1988
EcoICRI GAGCTC 3 cut(s) 1343, 1876, 1988
EcoNI CCTNNNNNAGG 2 cut(s) 393, 1460
EcoO109I RGGNCCY 3 cut(s) 109, 295, 399
EcoRI GAATTC 3 cut(s) 12, 430, 1102
EcoRII CCWGG 3 cut(s) 313, 550, 2580
EcoT14I CCWWGG 6 cut(s) 703, 914, 1050, 1461, 2005, 2343
EcoT38I GRGCYC 3 cut(s) 1345, 1878, 1990
ErhI CCWWGG 6 cut(s) 703, 914, 1050, 1461, 2005, 2343
FaqI GGGAC 8 cut(s) 122, 154, 363, 385, 1214, 1251, 2149, 2401
FauNDI CATATG 1 cut(s) 1318
FbaI TGATCA 2 cut(s) 1279, 1780
FblI GTMKAC 1 cut(s) 1258
Fnu4HI GCNGC 9 cut(s) 367, 688, 829, 987, 1692, 1695, 2214, 2720, 2852
FokI GGATG 9 cut(s) 95, 179, 440, 512, 677, 1820, 2548, 2740, 2778
FriOI GRGCYC 3 cut(s) 1345, 1878, 1990
Fsp4HI GCNGC 9 cut(s) 367, 688, 829, 987, 1692, 1695, 2214, 2720, 2852
FspBI CTAG 5 cut(s) 500, 929, 1493, 1854, 2217
GluI GCNGC 9 cut(s) 367, 688, 829, 987, 1692, 1695, 2214, 2720, 2852
GsaI CCCAGC 1 cut(s) 2428
GsuI CTGGAG 3 cut(s) 261, 1149, 1203
HaeIII GGCC 8 cut(s) 297, 612, 760, 831, 901, 1775, 2677, 2810
HgaI GACGC 1 cut(s) 1176
HincII GTYRAC 1 cut(s) 753
HindII GTYRAC 1 cut(s) 753
HindIII AAGCTT 1 cut(s) 626
HpaI GTTAAC 1 cut(s) 753
HphI GGTGA 4 cut(s) 557, 1450, 1625, 2111
Hpy166II GTNNAC 5 cut(s) 548, 753, 1211, 1259, 1942
Hpy188III TCNNGA 8 cut(s) 80, 146, 240, 557, 1879, 2166, 2237, 2408
Hpy8I GTNNAC 5 cut(s) 548, 753, 1211, 1259, 1942
HpyAV CCTTC 7 cut(s) 705, 1360, 1755, 1930, 2352, 2579, 2657
HpyCH4III ACNGT 6 cut(s) 255, 782, 1018, 1256, 1301, 1946
HpyCH4IV ACGT 2 cut(s) 716, 2648
HpyF10VI GCNNNNNNNGC 5 cut(s) 1068, 1772, 2210, 2318, 2750
HpySE526I ACGT 2 cut(s) 716, 2648
KflI GGGWCCC 1 cut(s) 399
Ksp22I TGATCA 2 cut(s) 1279, 1780
KspAI GTTAAC 1 cut(s) 753
LguI GCTCTTC 2 cut(s) 668, 1866
LmnI GCTCC 8 cut(s) 409, 450, 841, 1184, 1348, 1688, 2476, 2666
Lsp1109I GCAGC 6 cut(s) 699, 973, 1703, 1706, 2225, 2731
LweI GCATC 5 cut(s) 462, 699, 2097, 2762, 2800
MabI ACCWGGT 1 cut(s) 550
MaeI CTAG 5 cut(s) 500, 929, 1493, 1854, 2217
MaeII ACGT 2 cut(s) 716, 2648
MaeIII GTNAC 8 cut(s) 85, 179, 712, 1172, 1188, 1196, 1451, 1562
MbiI CCGCTC 1 cut(s) 828
MfeI CAATTG 2 cut(s) 1076, 1107
MflI RGATCY 5 cut(s) 148, 277, 496, 2404, 2635
MhlI GDGCHC 4 cut(s) 663, 1345, 1878, 1990
MlyI GAGTC 6 cut(s) 136, 672, 941, 1440, 2131, 2756
MmeI TCCRAC 3 cut(s) 1897, 2274, 2454
MseI TTAA 9 cut(s) 95, 203, 752, 947, 1148, 1844, 2142, 2196, 2382
MslI CAYNNNNRTG 3 cut(s) 191, 543, 947
MspA1I CMGCKG 2 cut(s) 802, 1697
MspCI CTTAAG 1 cut(s) 2141
MspR9I CCNGG 3 cut(s) 315, 552, 2582
MunI CAATTG 2 cut(s) 1076, 1107
Mva1269I GAATGC 1 cut(s) 2314
MvaI CCWGG 3 cut(s) 315, 552, 2582
MwoI GCNNNNNNNGC 5 cut(s) 1068, 1772, 2210, 2318, 2750
NcoI CCATGG 2 cut(s) 914, 2343
NdeI CATATG 1 cut(s) 1318
NlaIV GGNNCC 9 cut(s) 110, 150, 379, 400, 401, 523, 1048, 2406, 2668
NmuCI GTSAC 3 cut(s) 179, 1172, 1188
NspI RCATGY 5 cut(s) 190, 565, 659, 751, 1475
NspV TTCGAA 1 cut(s) 666
PaeI GCATGC 1 cut(s) 1475
PagI TCATGA 2 cut(s) 1878, 2236
PceI AGGCCT 3 cut(s) 901, 2677, 2810
PciI ACATGT 2 cut(s) 655, 747
PciSI GCTCTTC 2 cut(s) 668, 1866
PctI GAATGC 1 cut(s) 2314
PfoI TCCNGGA 1 cut(s) 2580
PkrI GCNGC 9 cut(s) 368, 689, 830, 988, 1693, 1696, 2215, 2721, 2853
PleI GAGTC 6 cut(s) 136, 672, 940, 1439, 2131, 2755
PpsI GAGTC 6 cut(s) 136, 672, 940, 1439, 2131, 2755
PpuMI RGGWCCY 2 cut(s) 109, 399
PscI ACATGT 2 cut(s) 655, 747
PshBI ATTAAT 1 cut(s) 947
Psp124BI GAGCTC 3 cut(s) 1345, 1878, 1990
Psp5II RGGWCCY 2 cut(s) 109, 399
Psp6I CCWGG 3 cut(s) 313, 550, 2580
PspFI CCCAGC 1 cut(s) 2424
PspGI CCWGG 3 cut(s) 313, 550, 2580
PspN4I GGNNCC 9 cut(s) 110, 150, 379, 400, 401, 523, 1048, 2406, 2668
PspPPI RGGWCCY 2 cut(s) 109, 399
PstNI CAGNNNCTG 3 cut(s) 1269, 1697, 2110
PsuI RGATCY 5 cut(s) 148, 277, 496, 2404, 2635
PvuII CAGCTG 2 cut(s) 802, 1697
RsaI GTAC 4 cut(s) 1023, 1144, 1327, 1478
RsaNI GTAC 4 cut(s) 1022, 1143, 1326, 1477
RseI CAYNNNNRTG 3 cut(s) 191, 543, 947
SacI GAGCTC 3 cut(s) 1345, 1878, 1990
SapI GCTCTTC 2 cut(s) 668, 1866
SaqAI TTAA 9 cut(s) 95, 203, 752, 947, 1148, 1844, 2142, 2196, 2382
SatI GCNGC 9 cut(s) 367, 688, 829, 987, 1692, 1695, 2214, 2720, 2852
SchI GAGTC 6 cut(s) 136, 672, 941, 1440, 2131, 2756
ScrFI CCNGG 3 cut(s) 315, 552, 2582
SduI GDGCHC 4 cut(s) 663, 1345, 1878, 1990
SexAI ACCWGGT 1 cut(s) 550
SfaNI GCATC 5 cut(s) 462, 699, 2097, 2762, 2800
SfcI CTRYAG 3 cut(s) 393, 404, 1010
SfuI TTCGAA 1 cut(s) 666
SinI GGWCC 8 cut(s) 109, 117, 305, 377, 399, 521, 1029, 1595
SmiMI CAYNNNNRTG 3 cut(s) 191, 543, 947
SmlI CTYRAG 3 cut(s) 1388, 2141, 2376
SmoI CTYRAG 3 cut(s) 1388, 2141, 2376
SphI GCATGC 1 cut(s) 1475
SseBI AGGCCT 3 cut(s) 901, 2677, 2810
SsiI CCGC 6 cut(s) 366, 828, 1272, 2302, 2763, 2852
SspI AATATT 3 cut(s) 417, 1722, 2414
SspMI CTAG 5 cut(s) 500, 929, 1493, 1854, 2217
SstI GAGCTC 3 cut(s) 1345, 1878, 1990
StuI AGGCCT 3 cut(s) 901, 2677, 2810
StyD4I CCNGG 3 cut(s) 313, 550, 2580
StyI CCWWGG 6 cut(s) 703, 914, 1050, 1461, 2005, 2343
TaaI ACNGT 6 cut(s) 255, 782, 1018, 1256, 1301, 1946
TaiI ACGT 2 cut(s) 719, 2651
TaqI TCGA 3 cut(s) 666, 894, 1434
TaqII GACCGA 1 cut(s) 2109
TauI GCSGC 3 cut(s) 369, 831, 2854
Tru1I TTAA 9 cut(s) 95, 203, 752, 947, 1148, 1844, 2142, 2196, 2382
Tru9I TTAA 9 cut(s) 95, 203, 752, 947, 1148, 1844, 2142, 2196, 2382
TscAI CASTG 3 cut(s) 688, 1408, 1783
TseFI GTSAC 3 cut(s) 179, 1172, 1188
TseI GCWGC 6 cut(s) 687, 986, 1691, 1694, 2213, 2719
Tsp45I GTSAC 3 cut(s) 179, 1172, 1188
TspGWI ACGGA 1 cut(s) 453
TspRI CASTG 3 cut(s) 688, 1408, 1783
Vha464I CTTAAG 1 cut(s) 2141
VpaK11BI GGWCC 8 cut(s) 109, 117, 305, 377, 399, 521, 1029, 1595
VspI ATTAAT 1 cut(s) 947
XagI CCTNNNNNAGG 2 cut(s) 393, 1460
XapI RAATTY 5 cut(s) 12, 220, 430, 1102, 1737
XceI RCATGY 5 cut(s) 190, 565, 659, 751, 1475
XcmI CCANNNNNNNNNTGG 1 cut(s) 949
XmiI GTMKAC 1 cut(s) 1258
XspI CTAG 5 cut(s) 500, 929, 1493, 1854, 2217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.