Rh5DG300200

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000487
Physical Location & Seq
Reverse (-)
37677159 .. 37682328
5170 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG300200.1

Sequence Viewer

Length: 2049 bp
ATGCAAGCGTGGGACATAAGTTGGGTGGGCTCAGATCCTTGTGATGGCTGGAAAGGTATTGACTGCACGAATGCACGTGTTACGTCGATAATATTGGCAGGCATGGGTTTGAGAGGTCAGCTACCCAGCGATATCCAGTTGTTGTCCGAGCTAGAGACTCTGGACCTATCTTTGAATAAGGACCTGACCGGACCAATTCCAACATCAATTGGAAACTTGAAAAAACTAGTGAACTTAAACCTTGCTGGCTGCAGTTTCTCTGAGCCTATTCCTCACACTATAGGAACTTTGAAGAATCTATATTATCTAGATCTGAATAACAATAGACTGAGTGGGCAAATTCCGCCTTCAATTGGTGCTCTTTCAAATCTTTTCTATCTGGACCTAACTAGCAACAAACTTCAAGGATACATCCCAGTCAGTAGTGAGGTTACACCGGGTCTTGATATGTTACACAAGGCGCAGCATTTTCATTTAGGAGACAATCAGCTCTCAGGCGAAATTCCAACTCAACTTTTCAGCTCAAAGATGGTTCTGGTGCACTTGCTCTTGGATAGAAATAATCTAACTGGCGAGATCCCTTCCACACTCGGACTTGTACAGACTCTGGTGACAGTGCGCCTTGATTGGAATTCATTAAGTGGGCTGGTGCCTTCAAGCCTCAACAATCTTTCAAACATGACTGTACTGTACTTGTCTAACAATCAGTTGATTGGCCCAGTACCAAACCTTACCGGCATGAATCCTCTCAACTATGTGGATATGAGTAATAATACTTTTGATGTGTCAGAAGTTCCTGATTGGTTTTCAACCTTGCAGTTCTTGACGACATTAATAATGGAAAACACACGGCTTCAGGGACAAGTTCCTCAAGCCCTATTTGGCTTTTACAATTTGCAGACAGTGGTACTAAGGAACAACAGTCTCAATGGCTTCTTGGATATTGAAACCAATTACGGCAACCAACTGCGACTAATTGATTTGGAAAATAACTCCATTACTAATCTTACACAAAGTGGAGAATCCAACTATACATTGATACTTGTTGGTAATCCAATTTGTAATCAGACAAACATGGCCAAGAATTATTGCATTGTTTCTTCATCAGATTCCTTATACTCAACACCACCAAATAACTGTGCGCCCATTGGCTGTAGTTCGGGAAAAGTATCCAGCCCGAATTGTAAATGTGCACATCCTTACACAGTAACTCTAGTCTTCTTATATGTCAGTTTCTCAGACTTTGGAAACTCAACTTATTACACAGAGCTAGAGATCTCTCTCATCCAATCTTTTCGGACTTACAACATTCCTGTGGATTCAGTTTCTCTGGGTTCTCCTTTCTTCGACTTATTTTATAACTTTCACCTGATCCTAGAGGTTTTCCCATCTGATCAAGATCACTTCAACAAATCAGAAGCTTCAGCACTTGCTTCTGTGCTTAGTAACCAGACTCTCCCACGTCCCCCGTATTTTGGACCCTTCTCTGTTGCATTAAATTATGCTCACTTCGGAGGATCAAACAAGGCCTTGATAATTGGTGCAGCAGTTGGCTGTTCTGTGCTGCTGCTATCAATAGCACTTGTAGGGGTTTATGCTCTCCAACGAAAGAGGAGAGCAAATGATCAACGGAGCAGAGCCCCTTTGCACGCTTGGATATCAAAAAGCAGTCTTCCTCAGTTAAAAGGAGCAAGATTGTTTTCTTTTAAAGAGCTTAAGGATTGCACCAATAGTTTTTCAGAAGCAAATGATATTGGTTCCGGGGGTTATGGAAATGTGTATCAGGGAGTACTTCCAACAGGCGAAATGGTTGCCATTAAACGAGCTAAAAGGGAATCTATCCTGGAAGGGATTGAGTTCAAAGCTGAGGTTGAGCTGCTTTCAAGGGTACATCATAAGAATCTTGTGAGCCTTGTTGGTTTTTGTTTGGAGCAAGATGAACAAATGTTGGTATACGAGTATGTTCCAAATGGTAACTTGATGGATAGTCTTTCAGGTAATCCATATACGGTATTGTTCTTCAATATAAATAAGAAATTAGGACCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

682

Amino Acids

74.96

Weight (kDa)

5.51

Isoelectric Point (pI)

35.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 580 - 665 2.7e-14 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 583 - 667 7.6e-15 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1359
AccB1I GGYRCC 1 cut(s) 649
AccI GTMKAC 1 cut(s) 1953
AciI CCGC 1 cut(s) 344
AclWI GGATC 4 cut(s) 29, 571, 1366, 1525
AcoI YGGCCR 1 cut(s) 1077
AcsI RAATTY 3 cut(s) 339, 501, 631
AcuI CTGAAG 2 cut(s) 839, 1407
AcvI CACGTG 1 cut(s) 77
AdeI CACNNNGTG 1 cut(s) 1016
AfaI GTAC 7 cut(s) 600, 687, 692, 723, 909, 1791, 1890
AfiI CCNNNNNNNGG 3 cut(s) 44, 353, 1475
AflII CTTAAG 1 cut(s) 1715
AflIII ACRYGT 1 cut(s) 76
AhlI ACTAGT 1 cut(s) 226
AjiI CACGTC 1 cut(s) 1463
AjnI CCWGG 1 cut(s) 1842
Alw21I GWGCWC 3 cut(s) 361, 543, 1195
Alw26I GTCTC 3 cut(s) 149, 474, 929
Alw44I GTGCAC 2 cut(s) 539, 1191
AlwI GGATC 4 cut(s) 29, 571, 1366, 1525
AlwNI CAGNNNCTG 1 cut(s) 607
AoxI GGCC 3 cut(s) 715, 1077, 1527
ApaLI GTGCAC 2 cut(s) 539, 1191
ApeKI GCWGC 6 cut(s) 249, 463, 1544, 1564, 1567, 1876
ApoI RAATTY 3 cut(s) 339, 501, 631
AseI ATTAAT 1 cut(s) 833
AspLEI GCGC 3 cut(s) 463, 621, 1144
AspS9I GGNCC 7 cut(s) 163, 181, 191, 382, 716, 1478, 2042
AsuC2I CCSGG 2 cut(s) 438, 1762
AsuHPI GGTGA 2 cut(s) 622, 1358
AvaII GGWCC 6 cut(s) 163, 181, 191, 382, 1478, 2042
BaeGI GKGCMC 2 cut(s) 543, 1195
BalI TGGCCA 1 cut(s) 1079
BanI GGYRCC 1 cut(s) 649
BanII GRGCYC 2 cut(s) 32, 1642
BbrPI CACGTG 1 cut(s) 77
BbsI GAAGAC 2 cut(s) 1210, 1664
Bbv12I GWGCWC 3 cut(s) 361, 543, 1195
BbvCI CCTCAGC 1 cut(s) 1866
BbvI GCAGC 6 cut(s) 236, 475, 1551, 1554, 1556, 1863
BccI CCATC 4 cut(s) 38, 523, 1396, 1975
BceAI ACGGC 2 cut(s) 866, 973
BcgI CGANNNNNNTGC 2 cut(s) 1793, 1827
BciT130I CCWGG 1 cut(s) 1844
BciVI GTATCC 2 cut(s) 401, 1180
BclI TGATCA 2 cut(s) 1393, 1624
BcnI CCSGG 2 cut(s) 438, 1762
BcoDI GTCTC 3 cut(s) 149, 474, 929
BcuI ACTAGT 1 cut(s) 226
BfaI CTAG 7 cut(s) 152, 227, 308, 390, 1214, 1271, 1376
BfmI CTRYAG 3 cut(s) 250, 279, 1153
BfrI CTTAAG 1 cut(s) 1715
BfuI GTATCC 2 cut(s) 401, 1180
BglII AGATCT 2 cut(s) 310, 1275
BisI GCNGC 6 cut(s) 250, 464, 1545, 1565, 1568, 1877
BlsI GCNGC 6 cut(s) 251, 465, 1546, 1566, 1569, 1878
BmcAI AGTACT 1 cut(s) 1791
Bme1390I CCNGG 3 cut(s) 438, 1762, 1844
Bme18I GGWCC 6 cut(s) 163, 181, 191, 382, 1478, 2042
BmgBI CACGTC 1 cut(s) 1463
BmgT120I GGNCC 7 cut(s) 163, 181, 191, 382, 716, 1478, 2042
BmiI GGNNCC 3 cut(s) 651, 1480, 1759
BmrFI CCNGG 3 cut(s) 438, 1762, 1844
BmrI ACTGGG 2 cut(s) 410, 713
BmuI ACTGGG 2 cut(s) 410, 713
BpiI GAAGAC 2 cut(s) 1210, 1664
Bpu10I CCTNAGC 1 cut(s) 1866
BpuEI CTTGAG 1 cut(s) 855
BpuMI CCSGG 2 cut(s) 438, 1762
BsaAI YACGTR 1 cut(s) 77
BsaBI GATNNNNATC 1 cut(s) 1398
BsaJI CCNNGG 1 cut(s) 1761
BsaWI WCCGGW 1 cut(s) 188
Bsc4I CCNNNNNNNGG 3 cut(s) 44, 353, 1475
Bse118I RCCGGY 1 cut(s) 734
Bse1I ACTGG 4 cut(s) 136, 416, 574, 719
Bse8I GATNNNNATC 1 cut(s) 1398
BseBI CCWGG 1 cut(s) 1844
BseDI CCNNGG 1 cut(s) 1761
BseGI GGATG 3 cut(s) 411, 1195, 1284
BseJI GATNNNNATC 1 cut(s) 1398
BseLI CCNNNNNNNGG 3 cut(s) 44, 353, 1475
BseMII CTCAG 7 cut(s) 45, 252, 320, 507, 1251, 1691, 1857
BseNI ACTGG 4 cut(s) 136, 416, 574, 719
BseRI GAGGAG 1 cut(s) 1627
BseSI GKGCMC 2 cut(s) 543, 1195
BseXI GCAGC 6 cut(s) 236, 475, 1551, 1554, 1556, 1863
BseYI CCCAGC 1 cut(s) 125
BsgI GTGCAG 2 cut(s) 49, 1563
BshFI GGCC 3 cut(s) 717, 1079, 1529
BshNI GGYRCC 1 cut(s) 649
BsiHKAI GWGCWC 3 cut(s) 361, 543, 1195
BsiSI CCGG 4 cut(s) 189, 437, 735, 1761
BslFI GGGAC 3 cut(s) 26, 873, 1449
BslI CCNNNNNNNGG 3 cut(s) 44, 353, 1475
BsmAI GTCTC 3 cut(s) 149, 474, 929
BsmFI GGGAC 3 cut(s) 26, 873, 1449
BsmI GAATGC 1 cut(s) 76
BsnI GGCC 3 cut(s) 717, 1079, 1529
Bsp1286I GDGCHC 5 cut(s) 32, 361, 543, 1195, 1642
Bsp1407I TGTACA 1 cut(s) 598
Bsp143I GATC 9 cut(s) 34, 310, 576, 1275, 1371, 1393, 1399, 1517, 1624
BspACI CCGC 1 cut(s) 344
BspANI GGCC 3 cut(s) 717, 1079, 1529
BspCNI CTCAG 7 cut(s) 44, 253, 321, 506, 1250, 1690, 1858
BspLI GGNNCC 3 cut(s) 651, 1480, 1759
BspMAI CTGCAG 1 cut(s) 254
BspPI GGATC 4 cut(s) 29, 571, 1366, 1525
BspT107I GGYRCC 1 cut(s) 649
BspTI CTTAAG 1 cut(s) 1715
BsrFI RCCGGY 1 cut(s) 734
BsrGI TGTACA 1 cut(s) 598
BsrI ACTGG 4 cut(s) 136, 416, 574, 719
BssAI RCCGGY 1 cut(s) 734
BssECI CCNNGG 1 cut(s) 1761
BssMI GATC 9 cut(s) 34, 310, 576, 1275, 1371, 1393, 1399, 1517, 1624
BssNAI GTATAC 1 cut(s) 1954
Bst1107I GTATAC 1 cut(s) 1954
Bst2UI CCWGG 1 cut(s) 1844
Bst4CI ACNGT 8 cut(s) 616, 685, 690, 904, 923, 1139, 1207, 2011
BstAFI CTTAAG 1 cut(s) 1715
BstAUI TGTACA 1 cut(s) 598
BstBAI YACGTR 1 cut(s) 77
BstC8I GCNNGC 4 cut(s) 6, 100, 247, 1650
BstDEI CTNAG 9 cut(s) 31, 261, 329, 493, 911, 1237, 1442, 1677, 1866
BstF5I GGATG 3 cut(s) 411, 1195, 1284
BstHHI GCGC 3 cut(s) 463, 621, 1144
BstKTI GATC 9 cut(s) 37, 313, 579, 1278, 1374, 1396, 1402, 1520, 1627
BstMAI GTCTC 3 cut(s) 149, 474, 929
BstMBI GATC 9 cut(s) 34, 310, 576, 1275, 1371, 1393, 1399, 1517, 1624
BstMWI GCNNNNNNNGC 1 cut(s) 343
BstNI CCWGG 1 cut(s) 1844
BstSCI CCNGG 3 cut(s) 436, 1760, 1842
BstSFI CTRYAG 3 cut(s) 250, 279, 1153
BstSLI GKGCMC 2 cut(s) 543, 1195
BstV1I GCAGC 6 cut(s) 236, 475, 1551, 1554, 1556, 1863
BstV2I GAAGAC 2 cut(s) 1210, 1664
BstX2I RGATCY 4 cut(s) 34, 310, 576, 1275
BstYI RGATCY 4 cut(s) 34, 310, 576, 1275
BstZ17I GTATAC 1 cut(s) 1954
BsuI GTATCC 2 cut(s) 401, 1180
BsuRI GGCC 3 cut(s) 717, 1079, 1529
BtrI CACGTC 1 cut(s) 1463
BtsCI GGATG 3 cut(s) 411, 1195, 1284
BtsIMutI CAGTG 2 cut(s) 621, 909
Cac8I GCNNGC 4 cut(s) 6, 100, 247, 1650
CaiI CAGNNNCTG 1 cut(s) 607
CfoI GCGC 3 cut(s) 463, 621, 1144
Cfr10I RCCGGY 1 cut(s) 734
Cfr13I GGNCC 7 cut(s) 163, 181, 191, 382, 716, 1478, 2042
Csp6I GTAC 7 cut(s) 599, 686, 691, 722, 908, 1790, 1889
CviAII CATG 4 cut(s) 103, 679, 739, 1075
CviQI GTAC 7 cut(s) 599, 686, 691, 722, 908, 1790, 1889
DdeI CTNAG 9 cut(s) 31, 261, 329, 493, 911, 1237, 1442, 1677, 1866
DpnI GATC 9 cut(s) 36, 312, 578, 1277, 1373, 1395, 1401, 1519, 1626
DpnII GATC 9 cut(s) 34, 310, 576, 1275, 1371, 1393, 1399, 1517, 1624
DraI TTTAAA 1 cut(s) 1708
DraIII CACNNNGTG 1 cut(s) 1016
EaeI YGGCCR 1 cut(s) 1077
EciI GGCGGA 1 cut(s) 333
Eco147I AGGCCT 1 cut(s) 1529
Eco24I GRGCYC 2 cut(s) 32, 1642
Eco32I GATATC 2 cut(s) 133, 1659
Eco47I GGWCC 6 cut(s) 163, 181, 191, 382, 1478, 2042
Eco57I CTGAAG 2 cut(s) 839, 1407
Eco72I CACGTG 1 cut(s) 77
EcoO109I RGGNCCY 2 cut(s) 181, 2042
EcoRI GAATTC 1 cut(s) 631
EcoRII CCWGG 1 cut(s) 1842
EcoRV GATATC 2 cut(s) 133, 1659
EcoT38I GRGCYC 2 cut(s) 32, 1642
FaeI CATG 4 cut(s) 106, 682, 742, 1078
FaqI GGGAC 3 cut(s) 26, 873, 1449
FatI CATG 4 cut(s) 102, 678, 738, 1074
FbaI TGATCA 2 cut(s) 1393, 1624
FblI GTMKAC 1 cut(s) 1953
Fnu4HI GCNGC 6 cut(s) 250, 464, 1545, 1565, 1568, 1877
FokI GGATG 3 cut(s) 398, 1182, 1271
FriOI GRGCYC 2 cut(s) 32, 1642
Fsp4HI GCNGC 6 cut(s) 250, 464, 1545, 1565, 1568, 1877
FspBI CTAG 7 cut(s) 152, 227, 308, 390, 1214, 1271, 1376
GlaI GCGC 3 cut(s) 462, 620, 1143
GluI GCNGC 6 cut(s) 250, 464, 1545, 1565, 1568, 1877
GsaI CCCAGC 1 cut(s) 129
HaeIII GGCC 3 cut(s) 717, 1079, 1529
HapII CCGG 4 cut(s) 189, 437, 735, 1761
HhaI GCGC 3 cut(s) 463, 621, 1144
Hin1II CATG 4 cut(s) 106, 682, 742, 1078
Hin6I GCGC 3 cut(s) 461, 619, 1142
HinP1I GCGC 3 cut(s) 461, 619, 1142
HindIII AAGCTT 1 cut(s) 1419
HpaII CCGG 4 cut(s) 189, 437, 735, 1761
HphI GGTGA 2 cut(s) 622, 1358
Hpy166II GTNNAC 4 cut(s) 232, 541, 1193, 1954
Hpy188III TCNNGA 8 cut(s) 161, 308, 380, 443, 797, 823, 1161, 1397
Hpy8I GTNNAC 4 cut(s) 232, 541, 1193, 1954
Hpy99I CGWCG 1 cut(s) 88
HpyAV CCTTC 5 cut(s) 357, 591, 663, 1492, 1841
HpyCH4III ACNGT 8 cut(s) 616, 685, 690, 904, 923, 1139, 1207, 2011
HpyCH4IV ACGT 3 cut(s) 76, 83, 1462
HpyF10VI GCNNNNNNNGC 1 cut(s) 343
HpyF3I CTNAG 9 cut(s) 31, 261, 329, 493, 911, 1237, 1442, 1677, 1866
HpySE526I ACGT 3 cut(s) 76, 83, 1462
Hsp92II CATG 4 cut(s) 106, 682, 742, 1078
HspAI GCGC 3 cut(s) 461, 619, 1142
Ksp22I TGATCA 2 cut(s) 1393, 1624
Kzo9I GATC 9 cut(s) 34, 310, 576, 1275, 1371, 1393, 1399, 1517, 1624
LmnI GCTCC 3 cut(s) 1632, 1688, 1930
Lsp1109I GCAGC 6 cut(s) 236, 475, 1551, 1554, 1556, 1863
MaeI CTAG 7 cut(s) 152, 227, 308, 390, 1214, 1271, 1376
MaeII ACGT 3 cut(s) 76, 83, 1462
MaeIII GTNAC 7 cut(s) 79, 430, 450, 610, 1207, 1445, 1973
MalI GATC 9 cut(s) 36, 312, 578, 1277, 1373, 1395, 1401, 1519, 1626
MboI GATC 9 cut(s) 34, 310, 576, 1275, 1371, 1393, 1399, 1517, 1624
MboII GAAGA 6 cut(s) 304, 1092, 1210, 1336, 1664, 2011
MfeI CAATTG 2 cut(s) 207, 351
MflI RGATCY 4 cut(s) 34, 310, 576, 1275
MhlI GDGCHC 5 cut(s) 32, 361, 543, 1195, 1642
MlsI TGGCCA 1 cut(s) 1079
MluNI TGGCCA 1 cut(s) 1079
MlyI GAGTC 3 cut(s) 151, 598, 1447
MmeI TCCRAC 5 cut(s) 224, 530, 1050, 1627, 1820
Mox20I TGGCCA 1 cut(s) 1079
MscI TGGCCA 1 cut(s) 1079
MseI TTAA 9 cut(s) 236, 638, 833, 1496, 1682, 1707, 1716, 1818, 2047
MslI CAYNNNNRTG 1 cut(s) 1313
Msp20I TGGCCA 1 cut(s) 1079
MspCI CTTAAG 1 cut(s) 1715
MspI CCGG 4 cut(s) 189, 437, 735, 1761
MspR9I CCNGG 3 cut(s) 438, 1762, 1844
MunI CAATTG 2 cut(s) 207, 351
Mva1269I GAATGC 1 cut(s) 76
MvaI CCWGG 1 cut(s) 1844
MwoI GCNNNNNNNGC 1 cut(s) 343
NciI CCSGG 2 cut(s) 438, 1762
NdeII GATC 9 cut(s) 34, 310, 576, 1275, 1371, 1393, 1399, 1517, 1624
NlaIII CATG 4 cut(s) 106, 682, 742, 1078
NlaIV GGNNCC 3 cut(s) 651, 1480, 1759
NmuCI GTSAC 1 cut(s) 610
PceI AGGCCT 1 cut(s) 1529
PctI GAATGC 1 cut(s) 76
PfeI GAWTC 7 cut(s) 295, 742, 1022, 1109, 1319, 1835, 1900
PfoI TCCNGGA 1 cut(s) 1842
PkrI GCNGC 6 cut(s) 251, 465, 1546, 1566, 1569, 1878
PleI GAGTC 3 cut(s) 151, 598, 1447
PmaCI CACGTG 1 cut(s) 77
PmlI CACGTG 1 cut(s) 77
PpsI GAGTC 3 cut(s) 151, 598, 1447
Ppu21I YACGTR 1 cut(s) 77
PpuMI RGGWCCY 2 cut(s) 181, 2042
PshBI ATTAAT 1 cut(s) 833
PsiI TTATAA 1 cut(s) 1359
Psp5II RGGWCCY 2 cut(s) 181, 2042
Psp6I CCWGG 1 cut(s) 1842
PspCI CACGTG 1 cut(s) 77
PspFI CCCAGC 1 cut(s) 125
PspGI CCWGG 1 cut(s) 1842
PspN4I GGNNCC 3 cut(s) 651, 1480, 1759
PspPI GGNCC 7 cut(s) 163, 181, 191, 382, 716, 1478, 2042
PspPPI RGGWCCY 2 cut(s) 181, 2042
PstI CTGCAG 1 cut(s) 254
PstNI CAGNNNCTG 1 cut(s) 607
PsuI RGATCY 4 cut(s) 34, 310, 576, 1275
RsaI GTAC 7 cut(s) 600, 687, 692, 723, 909, 1791, 1890
RsaNI GTAC 7 cut(s) 599, 686, 691, 722, 908, 1790, 1889
RseI CAYNNNNRTG 1 cut(s) 1313
SaqAI TTAA 9 cut(s) 236, 638, 833, 1496, 1682, 1707, 1716, 1818, 2047
SatI GCNGC 6 cut(s) 250, 464, 1545, 1565, 1568, 1877
Sau3AI GATC 9 cut(s) 34, 310, 576, 1275, 1371, 1393, 1399, 1517, 1624
Sau96I GGNCC 7 cut(s) 163, 181, 191, 382, 716, 1478, 2042
ScaI AGTACT 1 cut(s) 1791
SchI GAGTC 3 cut(s) 151, 598, 1447
ScrFI CCNGG 3 cut(s) 438, 1762, 1844
SduI GDGCHC 5 cut(s) 32, 361, 543, 1195, 1642
SfcI CTRYAG 3 cut(s) 250, 279, 1153
SinI GGWCC 6 cut(s) 163, 181, 191, 382, 1478, 2042
SmiMI CAYNNNNRTG 1 cut(s) 1313
SmlI CTYRAG 2 cut(s) 870, 1715
SmoI CTYRAG 2 cut(s) 870, 1715
SpeI ACTAGT 1 cut(s) 226
SseBI AGGCCT 1 cut(s) 1529
SsiI CCGC 1 cut(s) 344
SspI AATATT 1 cut(s) 93
SspMI CTAG 7 cut(s) 152, 227, 308, 390, 1214, 1271, 1376
StuI AGGCCT 1 cut(s) 1529
StyD4I CCNGG 3 cut(s) 436, 1760, 1842
TaaI ACNGT 8 cut(s) 616, 685, 690, 904, 923, 1139, 1207, 2011
TaiI ACGT 3 cut(s) 79, 86, 1465
TaqI TCGA 2 cut(s) 86, 1347
TatI WGTACW 4 cut(s) 598, 685, 690, 1789
TfiI GAWTC 7 cut(s) 295, 742, 1022, 1109, 1319, 1835, 1900
Tru1I TTAA 9 cut(s) 236, 638, 833, 1496, 1682, 1707, 1716, 1818, 2047
Tru9I TTAA 9 cut(s) 236, 638, 833, 1496, 1682, 1707, 1716, 1818, 2047
TscAI CASTG 2 cut(s) 621, 909
TseFI GTSAC 1 cut(s) 610
TseI GCWGC 6 cut(s) 249, 463, 1544, 1564, 1567, 1876
Tsp45I GTSAC 1 cut(s) 610
TspDTI ATGAA 5 cut(s) 461, 624, 755, 1092, 1953
TspGWI ACGGA 1 cut(s) 1645
TspRI CASTG 2 cut(s) 621, 909
Vha464I CTTAAG 1 cut(s) 1715
VneI GTGCAC 2 cut(s) 539, 1191
VpaK11BI GGWCC 6 cut(s) 163, 181, 191, 382, 1478, 2042
VspI ATTAAT 1 cut(s) 833
XapI RAATTY 3 cut(s) 339, 501, 631
XbaI TCTAGA 1 cut(s) 307
XmiI GTMKAC 1 cut(s) 1953
XspI CTAG 7 cut(s) 152, 227, 308, 390, 1214, 1271, 1376
ZrmI AGTACT 1 cut(s) 1791
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.