RchiOBHm_Chr5g0042311

Leucine-rich repeat receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
37063563 .. 37069128
5566 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32072

Sequence Viewer

Length: 2613 bp
ATGCAGATTCTCATGGATGAGTGGAATATAAAACCTCCTAGTTGGGTGAGTGCCGATCCTTGTGACGGCTGGGAAGGTATTAAGTGCACCAATTCACGCATCACTGCCTTAGTGTTGGCAGACATGGGTTTGAAAGGCCAGCTACCGACTGATATCGAGTTGAATTTATCTTTCAACAAGGGCCTGACAGGACAACTTCGAGCTTCAATTGGAAAATTGACGAAACTAGTACACTTAAACCTGGTTGGTTGCAGTTTCTTTGGTCCTATTCCAGACGCTATAGGATCTCTAACGAAGCTGTCTTACCTATCTCTGAAAAACAATAGTTTCAGTGGGCCAATTCCGCCTTCCATTGGTAATCTGGCCAATCTTACTTTTATAGACCTATCTGACAACAAGCTTCAGGGATCCATCCCAGTCTCTAATGGGACTACACTTGGTCTTGATAAGTTACTTAAGGCGAGACACTTTCATTTTGGGAACAATCAGCTCTCGGGCCCAATTCCACCTCGACTTTTCAGCTCAACGATGGCCATGATACATTTAATTTTTGACAGAAACAATCTAAGTGGTAGCATCCCTTCAACTGTTGGACTTGTTCAGACATTGCTGGCGGTGCACTTGTCCAATAATATGCTGACTGGCCCTATGCCCAACCTTACTGGCATGAATTCCCTCAACTATGTGGATTTGAGCAACAATACTTTTGCTGTGTCGGAGGTTCCTACCTGGTTTTCTACCTTGAAGCTTTTGACAACATTAATGATGGAAAACACGGGGCTTCAGGGAGAAGTTCCTCGTGCCCTCTTTGGCTTTGGGAATTTGGAGACAGTGGTACTGCGGAACAACCTTCTCAGTGGCTTATTGGATGTTGGCAACTCCAGCAACCAGTTGCAACTAATTGATCTGCAGCGGAACTTCATTACTGAACTTGCACCAAGCAAGGAAGGATCAAACTACACATTGATACTGGTTAATAATCCAATTTGTGAGGGGAGTCAGACTAATAATTACTGCATTGTTTCTCCAACTAATGCACCAAACGAAATGTCACCAACTTTAAGTAACTGTACAGCTGTTGCTTGTCCTTCAGGCCAGGTTTCTTCCCCCAACTGTAAATGTGCATCTCCCTACAGAGGAACTCTAGTCTTCATATTTGTTTCTTTCTCAAATTTGGGAAACTTTAGTTATTACAGAGAGCTTGAGAAAGCTATCATGAAAAGTTGTCAGTCCTTTAACCTCCCCGTGGATTCAGTTTCTCTGGGCCGTCCTTCCTGGGGTTCATCTTTTCATCTTGAGCTAGTCATAGAAGTCTTCCCATCTGGTGATCAAGTGCGCTTCAACCAAACAGGAGCTTCAGCTATTGCTTCTGTTTTAAGCAACCAGACTCTCGAAGGGCGTCCAATATTTTTTGGACCCTACTCTCCTGCAGGATCAAATAAGGGACTGATAATTGGTGCATCCATTGGTGGTTCTGTGCTTCTGTTATTAATAGTCCTTGTAGGGTTTTATGCTCTCTACCAAAAGAGGAGAGGAGACTCGCCATCACGTGGATCAATCCTCATGACAGGGGTTTCAAATGTCAGTGGTCCACAGTTAAAAGGAGCAAGGTTGTTCTCTTTTGAAGAGCTGAAGAAATATACAAACGGTTTTTCAGAAGAAAATGATATTGGATCTGGGGGTTATGGCCAGGTGTATCGGGGAACTCTTCCTATGGGCCAAACGGTTGCCATTAAAAGAGCTAAACGGGAATCTATGCAAGGTGCGCCTGAGTTCAAGGCCGAGGTTGAGCTTCTATCAAGAGTACACCATAAGAATCTTGTCAGCCTTGTTGGTTTTTGTTTGGACCAAGGAGAACAAATGTTGGTATATGAGTATGTTCAAAATGGTGATCTACTGGATAGTCTTTTAGGAAAGTCAGGAATCAGGTTAGACTGGATGAGGAGACTGAAAGTTGCTCTTGGTGCGGCAAAAGGTCTAGCATATCTTCATGAACATGCAAACCCTACCATTATTCACCGTGACATCAAATCAAACAACATCCTACTAGATAAAGATCTGGAAGCAAAAGTTGCTGACTTTGGTCTCTCCAAGTCTATGGCTGACAGTGGAAAGGATTATGTTACTACTCAAGTCAAAGGGACAATGGGCTACTTGGATCCTGAGTATTACATGACTCAACAGTTAACTGAGAAGAGTGATGTATATAGCTTCGGTGTGGTAATGTTGGAGCTGATAACTGCGAGAAGGCCAATAGAGCGAGGGAAGTACATTGTGAGAGTGGTACAGTCGGCAATGGATAAGTCAAAAGATTTGTATAACCTTCATGAAGTACTTGATCCAGCCATTGATTTAGAAAATGATCAGCTGAAAGGTTTAGAAATGTTTGTCAATTTGGCAATGTTGTGTGTAGACGAATTACGGGCTAAGAGGCCTAGTATGGGTGCAGTGGTAAAAGAGATAGAGAATATAATACAGATTTCTGCTACTAATTGGAACGCCGGTGCCAATTCAGCAGCTACTTCAGCAAGTTATGAGGATGTGAGTAGAGAAGTTTCCAAAGATCTTTACAGCGTCTTGGATTATAGTGTGGCTGTTCAAGGACGAAGATAG

Protein Analysis

870

Amino Acids

94.84

Weight (kDa)

6.66

Isoelectric Point (pI)

30.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 552 - 816 1.5e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 554 - 819 1.4e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2504
AccB7I CCANNNNNTGG 1 cut(s) 1550
AccI GTMKAC 1 cut(s) 2412
AciI CCGC 5 cut(s) 344, 614, 841, 913, 1967
AcoI YGGCCR 3 cut(s) 363, 531, 1687
AcsI RAATTY 4 cut(s) 163, 670, 820, 1171
AcuI CTGAAG 6 cut(s) 386, 767, 1074, 1341, 1652, 2508
AcvI CACGTG 1 cut(s) 1550
AcyI GRCGYC 1 cut(s) 1399
AfaI GTAC 7 cut(s) 231, 837, 1072, 1806, 2270, 2286, 2334
AfiI CCNNNNNNNGG 7 cut(s) 65, 353, 1136, 1246, 1277, 1550, 2441
AflII CTTAAG 1 cut(s) 455
AhlI ACTAGT 1 cut(s) 226
AjnI CCWGG 5 cut(s) 240, 728, 1095, 1274, 1689
AjuI GAANNNNNNNTTGG 4 cut(s) 331, 363, 1653, 1685
Alw21I GWGCWC 2 cut(s) 89, 621
Alw26I GTCTC 6 cut(s) 424, 457, 821, 1530, 1939, 2090
Alw44I GTGCAC 2 cut(s) 85, 617
Ama87I CYCGRG 1 cut(s) 493
ApaI GGGCCC 1 cut(s) 500
ApaLI GTGCAC 2 cut(s) 85, 617
ApeKI GCWGC 2 cut(s) 910, 2516
ApoI RAATTY 4 cut(s) 163, 670, 820, 1171
ArsI GACNNNNNNTTYG 2 cut(s) 1034, 1066
AseI ATTAAT 2 cut(s) 761, 1490
AspLEI GCGC 2 cut(s) 1338, 1768
AsuHPI GGTGA 5 cut(s) 58, 1044, 1337, 1901, 2009
AvaI CYCGRG 1 cut(s) 493
AvaII GGWCC 4 cut(s) 263, 1415, 1589, 1846
BaeGI GKGCMC 4 cut(s) 89, 500, 621, 805
BalI TGGCCA 3 cut(s) 365, 533, 1689
BamHI GGATCC 2 cut(s) 407, 2158
BanI GGYRCC 1 cut(s) 2504
BanII GRGCYC 1 cut(s) 500
BarI GAAGNNNNNNTAC 4 cut(s) 287, 319, 565, 597
BauI CACGAG 1 cut(s) 798
BbrPI CACGTG 1 cut(s) 1550
BbsI GAAGAC 2 cut(s) 1141, 1306
Bbv12I GWGCWC 2 cut(s) 89, 621
BbvI GCAGC 2 cut(s) 922, 2528
BccI CCATC 5 cut(s) 419, 523, 760, 1327, 1552
BceAI ACGGC 2 cut(s) 82, 1251
BciT130I CCWGG 5 cut(s) 242, 730, 1097, 1276, 1691
BclI TGATCA 2 cut(s) 1327, 2362
BcoDI GTCTC 6 cut(s) 424, 457, 821, 1530, 1939, 2090
BcuI ACTAGT 1 cut(s) 226
BfaI CTAG 7 cut(s) 39, 227, 1145, 1301, 1979, 2048, 2436
BfmI CTRYAG 4 cut(s) 279, 908, 1132, 1428
BfrI CTTAAG 1 cut(s) 455
BglII AGATCT 2 cut(s) 2056, 2563
BisI GCNGC 3 cut(s) 911, 1968, 2517
BlsI GCNGC 3 cut(s) 912, 1969, 2518
BmcAI AGTACT 1 cut(s) 2334
Bme1390I CCNGG 5 cut(s) 242, 730, 1097, 1276, 1691
Bme18I GGWCC 4 cut(s) 263, 1415, 1589, 1846
BmeT110I CYCGRG 1 cut(s) 493
BmiI GGNNCC 6 cut(s) 409, 498, 723, 1417, 2160, 2506
BmrFI CCNGG 5 cut(s) 242, 730, 1097, 1276, 1691
BmrI ACTGGG 1 cut(s) 410
BmsI GCATC 4 cut(s) 108, 585, 1133, 1469
BmuI ACTGGG 1 cut(s) 410
BoxI GACNNNNGTC 1 cut(s) 2082
BpiI GAAGAC 2 cut(s) 1141, 1306
BpmI CTGGAG 1 cut(s) 865
BpuEI CTTGAG 3 cut(s) 1223, 1316, 2115
BsaAI YACGTR 1 cut(s) 1550
BsaBI GATNNNNATC 1 cut(s) 2055
BsaHI GRCGYC 1 cut(s) 1399
BsaI GGTCTC 1 cut(s) 2090
BsaJI CCNNGG 4 cut(s) 1245, 1275, 1782, 1849
Bsc4I CCNNNNNNNGG 7 cut(s) 65, 353, 1136, 1246, 1277, 1550, 2441
Bse118I RCCGGY 1 cut(s) 2501
Bse1I ACTGG 7 cut(s) 416, 646, 667, 889, 975, 1902, 1940
Bse3DI GCAATG 3 cut(s) 605, 2301, 2406
Bse8I GATNNNNATC 1 cut(s) 2055
BseBI CCWGG 5 cut(s) 242, 730, 1097, 1276, 1691
BseDI CCNNGG 4 cut(s) 1245, 1275, 1782, 1849
BseGI GGATG 8 cut(s) 22, 411, 576, 874, 1460, 1944, 2040, 2545
BseJI GATNNNNATC 1 cut(s) 2055
BseLI CCNNNNNNNGG 7 cut(s) 65, 353, 1136, 1246, 1277, 1550, 2441
BseMI GCAATG 3 cut(s) 605, 2301, 2406
BseMII CTCAG 4 cut(s) 868, 1761, 2154, 2181
BseNI ACTGG 7 cut(s) 416, 646, 667, 889, 975, 1902, 1940
BseRI GAGGAG 3 cut(s) 1543, 1548, 1957
BseSI GKGCMC 4 cut(s) 89, 500, 621, 805
BseXI GCAGC 2 cut(s) 922, 2528
BseYI CCCAGC 1 cut(s) 69
BsgI GTGCAG 1 cut(s) 2466
BshNI GGYRCC 1 cut(s) 2504
BsiHKAI GWGCWC 2 cut(s) 89, 621
BsiHKCI CYCGRG 1 cut(s) 493
BsiSI CCGG 1 cut(s) 2502
BslFI GGGAC 3 cut(s) 442, 1458, 2155
BslI CCNNNNNNNGG 7 cut(s) 65, 353, 1136, 1246, 1277, 1550, 2441
BsmAI GTCTC 6 cut(s) 424, 457, 821, 1530, 1939, 2090
BsmFI GGGAC 3 cut(s) 442, 1458, 2155
Bso31I GGTCTC 1 cut(s) 2090
BsoBI CYCGRG 1 cut(s) 493
Bsp120I GGGCCC 1 cut(s) 496
Bsp1286I GDGCHC 4 cut(s) 89, 500, 621, 805
Bsp1407I TGTACA 1 cut(s) 1070
BspACI CCGC 5 cut(s) 344, 614, 841, 913, 1967
BspCNI CTCAG 4 cut(s) 867, 1762, 2155, 2182
BspHI TCATGA 4 cut(s) 1215, 1563, 1990, 2326
BspLI GGNNCC 6 cut(s) 409, 498, 723, 1417, 2160, 2506
BspMAI CTGCAG 2 cut(s) 912, 1432
BspQI GCTCTTC 1 cut(s) 1620
BspT107I GGYRCC 1 cut(s) 2504
BspTI CTTAAG 1 cut(s) 455
BspTNI GGTCTC 1 cut(s) 2090
BsrDI GCAATG 3 cut(s) 605, 2301, 2406
BsrFI RCCGGY 1 cut(s) 2501
BsrGI TGTACA 1 cut(s) 1070
BsrI ACTGG 7 cut(s) 416, 646, 667, 889, 975, 1902, 1940
BssAI RCCGGY 1 cut(s) 2501
BssECI CCNNGG 4 cut(s) 1245, 1275, 1782, 1849
BssNI GRCGYC 1 cut(s) 1399
BssSI CACGAG 1 cut(s) 798
BssT1I CCWWGG 1 cut(s) 1849
Bst2BI CACGAG 1 cut(s) 798
Bst2UI CCWGG 5 cut(s) 242, 730, 1097, 1276, 1691
Bst6I CTCTTC 3 cut(s) 1620, 1713, 2189
BstACI GRCGYC 1 cut(s) 1399
BstAFI CTTAAG 1 cut(s) 455
BstAPI GCANNNNNTGC 1 cut(s) 2072
BstAUI TGTACA 1 cut(s) 1070
BstBAI YACGTR 1 cut(s) 1550
BstC8I GCNNGC 2 cut(s) 140, 612
BstDEI CTNAG 7 cut(s) 109, 566, 854, 1770, 2163, 2190, 2427
BstDSI CCRYGG 1 cut(s) 1245
BstF5I GGATG 8 cut(s) 22, 411, 576, 874, 1460, 1944, 2040, 2545
BstHHI GCGC 2 cut(s) 1338, 1768
BstMAI GTCTC 6 cut(s) 424, 457, 821, 1530, 1939, 2090
BstMWI GCNNNNNNNGC 9 cut(s) 343, 616, 882, 1765, 1964, 2072, 2257, 2513, 2525
BstNI CCWGG 5 cut(s) 242, 730, 1097, 1276, 1691
BstNSI RCATGY 1 cut(s) 2000
BstPAI GACNNNNGTC 1 cut(s) 2082
BstSCI CCNGG 5 cut(s) 240, 728, 1095, 1274, 1689
BstSFI CTRYAG 4 cut(s) 279, 908, 1132, 1428
BstSLI GKGCMC 4 cut(s) 89, 500, 621, 805
BstV1I GCAGC 2 cut(s) 922, 2528
BstV2I GAAGAC 2 cut(s) 1141, 1306
BstX2I RGATCY 6 cut(s) 284, 407, 1673, 2056, 2158, 2563
BstXI CCANNNNNNTGG 1 cut(s) 2098
BstYI RGATCY 6 cut(s) 284, 407, 1673, 2056, 2158, 2563
BtgI CCRYGG 1 cut(s) 1245
BtsCI GGATG 8 cut(s) 22, 411, 576, 874, 1460, 1944, 2040, 2545
BtsI GCAGTG 2 cut(s) 102, 2454
BtsIMutI CAGTG 7 cut(s) 102, 337, 837, 862, 1591, 2113, 2454
Cac8I GCNNGC 2 cut(s) 140, 612
CciI TCATGA 4 cut(s) 1215, 1563, 1990, 2326
CfoI GCGC 2 cut(s) 1338, 1768
Cfr10I RCCGGY 1 cut(s) 2501
CseI GACGC 3 cut(s) 284, 1388, 2563
CsiI ACCWGGT 2 cut(s) 240, 728
Csp6I GTAC 7 cut(s) 230, 836, 1071, 1805, 2269, 2285, 2333
CspCI CAANNNNNGTGG 2 cut(s) 550, 585
CviQI GTAC 7 cut(s) 230, 836, 1071, 1805, 2269, 2285, 2333
DdeI CTNAG 7 cut(s) 109, 566, 854, 1770, 2163, 2190, 2427
EaeI YGGCCR 3 cut(s) 363, 531, 1687
Eam1104I CTCTTC 3 cut(s) 1620, 1713, 2189
EarI CTCTTC 3 cut(s) 1620, 1713, 2189
EciI GGCGGA 1 cut(s) 333
Eco130I CCWWGG 1 cut(s) 1849
Eco147I AGGCCT 1 cut(s) 2434
Eco24I GRGCYC 1 cut(s) 500
Eco31I GGTCTC 1 cut(s) 2090
Eco32I GATATC 1 cut(s) 154
Eco47I GGWCC 4 cut(s) 263, 1415, 1589, 1846
Eco57I CTGAAG 6 cut(s) 386, 767, 1074, 1341, 1652, 2508
Eco72I CACGTG 1 cut(s) 1550
Eco88I CYCGRG 1 cut(s) 493
EcoO109I RGGNCCY 1 cut(s) 181
EcoRI GAATTC 1 cut(s) 670
EcoRII CCWGG 5 cut(s) 240, 728, 1095, 1274, 1689
EcoRV GATATC 1 cut(s) 154
EcoT14I CCWWGG 1 cut(s) 1849
EcoT38I GRGCYC 1 cut(s) 500
ErhI CCWWGG 1 cut(s) 1849
FalI AAGNNNNNCTT 2 cut(s) 1944, 1976
FaqI GGGAC 3 cut(s) 442, 1458, 2155
FbaI TGATCA 2 cut(s) 1327, 2362
FblI GTMKAC 1 cut(s) 2412
Fnu4HI GCNGC 3 cut(s) 911, 1968, 2517
FokI GGATG 8 cut(s) 29, 398, 563, 881, 1447, 1951, 2027, 2552
FriOI GRGCYC 1 cut(s) 500
Fsp4HI GCNGC 3 cut(s) 911, 1968, 2517
FspBI CTAG 7 cut(s) 39, 227, 1145, 1301, 1979, 2048, 2436
GlaI GCGC 2 cut(s) 1337, 1767
GluI GCNGC 3 cut(s) 911, 1968, 2517
GsaI CCCAGC 1 cut(s) 73
GsuI CTGGAG 1 cut(s) 865
HapII CCGG 1 cut(s) 2502
HgaI GACGC 3 cut(s) 284, 1388, 2563
HhaI GCGC 2 cut(s) 1338, 1768
Hin1I GRCGYC 1 cut(s) 1399
Hin6I GCGC 2 cut(s) 1336, 1766
HinP1I GCGC 2 cut(s) 1336, 1766
HincII GTYRAC 1 cut(s) 2187
HindII GTYRAC 1 cut(s) 2187
HindIII AAGCTT 2 cut(s) 398, 746
HinfI GANTC 9 cut(s) 7, 997, 1250, 1387, 1538, 1751, 1816, 1923, 2176
HpaI GTTAAC 1 cut(s) 2187
HpaII CCGG 1 cut(s) 2502
HphI GGTGA 5 cut(s) 58, 1044, 1337, 1901, 2009
Hpy166II GTNNAC 7 cut(s) 87, 232, 619, 1592, 1807, 2187, 2413
Hpy188I TCNGA 6 cut(s) 315, 391, 603, 718, 1002, 1657
Hpy8I GTNNAC 7 cut(s) 87, 232, 619, 1592, 1807, 2187, 2413
HpyCH4IV ACGT 1 cut(s) 1549
HpyF10VI GCNNNNNNNGC 9 cut(s) 343, 616, 882, 1765, 1964, 2072, 2257, 2513, 2525
HpyF3I CTNAG 7 cut(s) 109, 566, 854, 1770, 2163, 2190, 2427
HpySE526I ACGT 1 cut(s) 1549
Hsp92I GRCGYC 1 cut(s) 1399
HspAI GCGC 2 cut(s) 1336, 1766
Ksp22I TGATCA 2 cut(s) 1327, 2362
KspAI GTTAAC 1 cut(s) 2187
LguI GCTCTTC 1 cut(s) 1620
LmnI GCTCC 3 cut(s) 1352, 1604, 2230
Lsp1109I GCAGC 2 cut(s) 922, 2528
LweI GCATC 4 cut(s) 108, 585, 1133, 1469
MabI ACCWGGT 2 cut(s) 240, 728
MaeI CTAG 7 cut(s) 39, 227, 1145, 1301, 1979, 2048, 2436
MaeII ACGT 1 cut(s) 1549
MaeIII GTNAC 6 cut(s) 62, 450, 1050, 1064, 2021, 2122
MboII GAAGA 9 cut(s) 1095, 1141, 1306, 1637, 1645, 1670, 1700, 1979, 2206
MfeI CAATTG 1 cut(s) 207
MflI RGATCY 6 cut(s) 284, 407, 1673, 2056, 2158, 2563
MhlI GDGCHC 4 cut(s) 89, 500, 621, 805
MlsI TGGCCA 3 cut(s) 365, 533, 1689
MluNI TGGCCA 3 cut(s) 365, 533, 1689
MlyI GAGTC 4 cut(s) 1006, 1381, 1532, 2170
MmeI TCCRAC 4 cut(s) 571, 696, 1052, 2208
Mox20I TGGCCA 3 cut(s) 365, 533, 1689
MscI TGGCCA 3 cut(s) 365, 533, 1689
MslI CAYNNNNRTG 1 cut(s) 1995
Msp20I TGGCCA 3 cut(s) 365, 533, 1689
MspA1I CMGCKG 3 cut(s) 913, 1076, 2368
MspCI CTTAAG 1 cut(s) 455
MspI CCGG 1 cut(s) 2502
MspR9I CCNGG 5 cut(s) 242, 730, 1097, 1276, 1691
MunI CAATTG 1 cut(s) 207
MvaI CCWGG 5 cut(s) 242, 730, 1097, 1276, 1691
MwoI GCNNNNNNNGC 9 cut(s) 343, 616, 882, 1765, 1964, 2072, 2257, 2513, 2525
NlaIV GGNNCC 6 cut(s) 409, 498, 723, 1417, 2160, 2506
NmeAIII GCCGAG 1 cut(s) 1807
NmuCI GTSAC 3 cut(s) 62, 1050, 2021
NspI RCATGY 1 cut(s) 2000
PagI TCATGA 4 cut(s) 1215, 1563, 1990, 2326
PceI AGGCCT 1 cut(s) 2434
PciSI GCTCTTC 1 cut(s) 1620
PfeI GAWTC 5 cut(s) 7, 1250, 1751, 1816, 1923
PflMI CCANNNNNTGG 1 cut(s) 1550
PkrI GCNGC 3 cut(s) 912, 1969, 2518
PleI GAGTC 4 cut(s) 1005, 1381, 1532, 2170
PmaCI CACGTG 1 cut(s) 1550
PmlI CACGTG 1 cut(s) 1550
PpsI GAGTC 4 cut(s) 1005, 1381, 1532, 2170
Ppu21I YACGTR 1 cut(s) 1550
PshAI GACNNNNGTC 1 cut(s) 2082
PshBI ATTAAT 2 cut(s) 761, 1490
Psp6I CCWGG 5 cut(s) 240, 728, 1095, 1274, 1689
PspCI CACGTG 1 cut(s) 1550
PspFI CCCAGC 1 cut(s) 69
PspGI CCWGG 5 cut(s) 240, 728, 1095, 1274, 1689
PspN4I GGNNCC 6 cut(s) 409, 498, 723, 1417, 2160, 2506
PspOMI GGGCCC 1 cut(s) 496
PstI CTGCAG 2 cut(s) 912, 1432
PsuI RGATCY 6 cut(s) 284, 407, 1673, 2056, 2158, 2563
PvuII CAGCTG 2 cut(s) 1076, 2368
RsaI GTAC 7 cut(s) 231, 837, 1072, 1806, 2270, 2286, 2334
RsaNI GTAC 7 cut(s) 230, 836, 1071, 1805, 2269, 2285, 2333
RseI CAYNNNNRTG 1 cut(s) 1995
SapI GCTCTTC 1 cut(s) 1620
SatI GCNGC 3 cut(s) 911, 1968, 2517
SbfI CCTGCAGG 1 cut(s) 1432
ScaI AGTACT 1 cut(s) 2334
SchI GAGTC 4 cut(s) 1006, 1381, 1532, 2170
ScrFI CCNGG 5 cut(s) 242, 730, 1097, 1276, 1691
SdaI CCTGCAGG 1 cut(s) 1432
SduI GDGCHC 4 cut(s) 89, 500, 621, 805
SexAI ACCWGGT 2 cut(s) 240, 728
SfaNI GCATC 4 cut(s) 108, 585, 1133, 1469
SfcI CTRYAG 4 cut(s) 279, 908, 1132, 1428
SgrAI CRCCGGYG 1 cut(s) 2501
SinI GGWCC 4 cut(s) 263, 1415, 1589, 1846
SmiMI CAYNNNNRTG 1 cut(s) 1995
SmlI CTYRAG 4 cut(s) 455, 1202, 1295, 2130
SmoI CTYRAG 4 cut(s) 455, 1202, 1295, 2130
SpeI ACTAGT 1 cut(s) 226
Sse8387I CCTGCAGG 1 cut(s) 1432
SseBI AGGCCT 1 cut(s) 2434
SsiI CCGC 5 cut(s) 344, 614, 841, 913, 1967
SspI AATATT 1 cut(s) 1407
SspMI CTAG 7 cut(s) 39, 227, 1145, 1301, 1979, 2048, 2436
StuI AGGCCT 1 cut(s) 2434
StyD4I CCNGG 5 cut(s) 240, 728, 1095, 1274, 1689
StyI CCWWGG 1 cut(s) 1849
TaiI ACGT 1 cut(s) 1552
TaqI TCGA 4 cut(s) 156, 199, 511, 1392
TatI WGTACW 5 cut(s) 229, 1070, 1804, 2268, 2332
TauI GCSGC 1 cut(s) 1970
TfiI GAWTC 5 cut(s) 7, 1250, 1751, 1816, 1923
TscAI CASTG 7 cut(s) 109, 337, 837, 862, 1591, 2113, 2454
TseFI GTSAC 3 cut(s) 62, 1050, 2021
TseI GCWGC 2 cut(s) 910, 2516
Tsp45I GTSAC 3 cut(s) 62, 1050, 2021
TspRI CASTG 7 cut(s) 109, 337, 837, 862, 1591, 2113, 2454
Van91I CCANNNNNTGG 1 cut(s) 1550
Vha464I CTTAAG 1 cut(s) 455
VneI GTGCAC 2 cut(s) 85, 617
VpaK11BI GGWCC 4 cut(s) 263, 1415, 1589, 1846
VspI ATTAAT 2 cut(s) 761, 1490
XapI RAATTY 4 cut(s) 163, 670, 820, 1171
XceI RCATGY 1 cut(s) 2000
XcmI CCANNNNNNNNNTGG 1 cut(s) 358
XmiI GTMKAC 1 cut(s) 2412
XspI CTAG 7 cut(s) 39, 227, 1145, 1301, 1979, 2048, 2436
ZrmI AGTACT 1 cut(s) 2334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.