Rh5DG299400

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000487
Physical Location & Seq
Reverse (-)
37620988 .. 37626877
5890 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG299400.1

Sequence Viewer

Length: 2190 bp
ATGGGTCGTGCTCGAGCCATTGGTGCGTTTGCGGTGCTTGTGTTAGTCCAGTTCTTTGTTATTGCAGCAGAGGCAAACACTCAGGAATATGGTTACATGCAGATTCTCATGGATGAGTGGAATATAAAACCTCCTAGTTGGGTGAGTGCCGATCCTTGTGACGGCTGGGAAGGTATTAAGTGCACCAATTCACGCATCACTGCCTTAATTTTTGACAGAAACAATCTAAGTGGTAGCATCCCTTCAACTGTTGGACTTGTTCAGACATTGCTGGCGGTACGCCTGGATGGAAATTCATTAAGTGGGAGTGTGCCTTCGAGCCTCAACAACCTTACTAATGTGTCTGAACTGCACTTGTCCAATAATATGCTGACTGGCCCTATGCCCAACCTTACTGGCATGAATTCCCTCAACTATGTGGATTTGAGCAACAATACTTTTGCTGTGTCGGAGGTTCCTACCTGGTTTTCTACCTTGAAGCTTTTGACAACATTAATGATGGAAAACACGGGGCTTCAGGGAGAAGTTCCTCGTGCCCTCTTTGGCTTTGGGAATTTGGAGACAGTGGTACTGCGGAACAACCTTCTCAGTGGCTTATTGGATGTTGGCAACTCCAGCAACCAGTTGCAACTAATTGATCTGCAGCGGAACTTCATTACTGAACTTGCACCAAGCAAGGAAGGATCAAACTACACATTGATACTGGTTAATAATCCAATTTGTGAGGGGAGTCAGACTAATAATTACTGCATTGTTTCTCCAACTAATGCACCAAACGAAATGTCACCAACTTTAAGTAACTGTACAGCTGTTGCTTGTCCTTCAGGCCAGGTTTCTTCCCCCAACTGTAAATGTGCATCTCCCTACAGAGGAACTCTAGTCTTCATATTTGTTTCTTTCTCAAATTTGGGAAACTTTAGTTATTACAGAGAGCTTGAGAAAGCTATCATGAAAAGTTGTCAGTCCTTTAACCTCCCCGTGGATTCAGTTTCTCTGGGCCGTCCTTCCTGGGGTTCATCTTTTCATCTTGAGCTAGTCATAGAAGTCTTCCCATCTGGTGATCAAGTGCGCTTCAACCAAACAGGAGCTTCAGCTATTGCTTCTGTTTTAAGCAACCAGACTCTCGAAGGGCGTCCAATATTTTTTGGACCCTACTCTGTGTTTTATCCTTCCGGTAGCTCTGGAGGATCAAATAAGGGACTGATAATTGGTGCATCCATTGGTGGTTCTGTGCTTCTGTTATTAATAGTCCTTGTAGGGTTTTATGCTCTCTACCAAAAGAGGAGAGGAGACTCGCCATCACGTGGATCAATCCTCATGCAGACAGGGGTTTCAAATGTCAGTGGTCCACAGTTAAAAGGAGCAAGGTTGTTCTCTTTTGAAGAGCTGAAGAAATATACAAACGGTTTTTCAGAAGAAAATGATATTGGATCTGGGGGTTATGGCCAGGTGTATCGGGGAACTCTTCCTATGGGCCAAACGGTTGCCATTAAAAGAGCTAAACGGGAATCTATGCAAGGTGCGCCTGAGTTCAAGGCCGAGGTTGAGCTTCTATCAAGAGTACACCATAAGAATCTTGTCAGCCTTGTTGGTTTTTGTTTGGACCAAGGAGAACAAATGTTGGTATATGAGTATGTTCAAAATGGTGATCTACTGGATAGTCTTTTAGGAAAGTCAGGAATCAGTGGAAAGGATTATGTTACTACTCAAGTCAAAGGGACAATGGGCTACTTGGATCCTGAGTATTACATGACTCAACAGTTAACTGAGAAGAGTGATGTATATAGCTTCGGTGTGGTAATGTTGGAGCTGATAACTGCGAGAAGGCCAATAGAGCGAGGGAAGTACATTGTGAGAGTGGTACAGTCGGCAATGGATAAGTCAAAAGATTTGTATAACCTTCATGAAGTACTTGATCCAGCCATTGATTTAGAAAATGATCAGCTGAAAGGTTTAGAAATGTTTGTCAATTTGGCAATGTTGTGTGTAGACGAATTACGGGCTAAGAGGCCTAGTATGGGTGCAGTGGTAAAAGAGATAGAGAATATAATACAGATTTCTGCTACTAATTGGAACGCCGGTGCCAATTCAGCAGCTACTTCAGCAAGTTATGAGGATGTGAGTAGAGAAGTTTCCAAAGATCTTTACAGCGTCTTGGATTATAGTGTGGCTGTTCAAGGACGAAGATAG

Protein Analysis

729

Amino Acids

79.44

Weight (kDa)

5.34

Isoelectric Point (pI)

33.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 471 - 560 5.8e-13 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 473 - 562 1e-16 Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr PF07714 566 - 678 4.7e-07 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 567 - 676 7.2e-07 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2081
AccB7I CCANNNNNTGG 1 cut(s) 1304
AccI GTMKAC 1 cut(s) 1989
AciI CCGC 4 cut(s) 32, 275, 574, 646
AclWI GGATC 8 cut(s) 146, 691, 1195, 1315, 1438, 1730, 1743, 1910
AcoI YGGCCR 1 cut(s) 1444
AcsI RAATTY 4 cut(s) 292, 403, 553, 904
AcuI CTGAAG 5 cut(s) 500, 807, 1074, 1409, 2085
AcvI CACGTG 1 cut(s) 1304
AcyI GRCGYC 1 cut(s) 1132
AfaI GTAC 7 cut(s) 279, 570, 805, 1563, 1847, 1863, 1911
AfiI CCNNNNNNNGG 6 cut(s) 161, 869, 979, 1010, 1304, 2018
AgsI TTSAA 8 cut(s) 246, 478, 1075, 1335, 1382, 1534, 1640, 2177
AjnI CCWGG 5 cut(s) 282, 461, 828, 1007, 1446
AjuI GAANNNNNNNTTGG 2 cut(s) 1410, 1442
Alw21I GWGCWC 2 cut(s) 13, 185
Alw26I GTCTC 2 cut(s) 554, 1284
Alw44I GTGCAC 1 cut(s) 181
AlwI GGATC 8 cut(s) 146, 691, 1195, 1315, 1438, 1730, 1743, 1910
Ama87I CYCGRG 1 cut(s) 12
AoxI GGCC 8 cut(s) 376, 826, 997, 1444, 1474, 1536, 1826, 2009
ApaLI GTGCAC 1 cut(s) 181
ApeKI GCWGC 3 cut(s) 65, 643, 2093
ApoI RAATTY 4 cut(s) 292, 403, 553, 904
ArsI GACNNNNNNTTYG 2 cut(s) 767, 799
AseI ATTAAT 2 cut(s) 494, 1244
AspLEI GCGC 2 cut(s) 1071, 1525
AspS9I GGNCC 6 cut(s) 377, 997, 1148, 1346, 1474, 1603
AsuHPI GGTGA 4 cut(s) 154, 777, 1070, 1658
AvaI CYCGRG 1 cut(s) 12
AvaII GGWCC 3 cut(s) 1148, 1346, 1603
BaeGI GKGCMC 2 cut(s) 185, 538
BalI TGGCCA 1 cut(s) 1446
BamHI GGATCC 1 cut(s) 1735
BanI GGYRCC 1 cut(s) 2081
BarI GAAGNNNNNNTAC 2 cut(s) 226, 258
BauI CACGAG 1 cut(s) 531
BbrPI CACGTG 1 cut(s) 1304
BbsI GAAGAC 2 cut(s) 874, 1039
Bbv12I GWGCWC 2 cut(s) 13, 185
BbvI GCAGC 3 cut(s) 77, 655, 2105
BccI CCATC 4 cut(s) 281, 493, 1060, 1306
BceAI ACGGC 2 cut(s) 178, 984
BciT130I CCWGG 5 cut(s) 284, 463, 830, 1009, 1448
BclI TGATCA 2 cut(s) 1060, 1939
BcoDI GTCTC 2 cut(s) 554, 1284
BfaI CTAG 4 cut(s) 135, 878, 1034, 2013
BfmI CTRYAG 2 cut(s) 641, 865
BglII AGATCT 1 cut(s) 2140
BisI GCNGC 3 cut(s) 66, 644, 2094
BlsI GCNGC 3 cut(s) 67, 645, 2095
BmcAI AGTACT 1 cut(s) 1911
Bme1390I CCNGG 5 cut(s) 284, 463, 830, 1009, 1448
Bme18I GGWCC 3 cut(s) 1148, 1346, 1603
BmeT110I CYCGRG 1 cut(s) 12
BmgT120I GGNCC 6 cut(s) 377, 997, 1148, 1346, 1474, 1603
BmiI GGNNCC 4 cut(s) 456, 1150, 1737, 2083
BmrFI CCNGG 5 cut(s) 284, 463, 830, 1009, 1448
BmsI GCATC 4 cut(s) 204, 246, 866, 1223
BpiI GAAGAC 2 cut(s) 874, 1039
BpmI CTGGAG 2 cut(s) 598, 1203
BpuEI CTTGAG 3 cut(s) 956, 1049, 1692
BsaAI YACGTR 1 cut(s) 1304
BsaHI GRCGYC 1 cut(s) 1132
BsaJI CCNNGG 4 cut(s) 978, 1008, 1539, 1606
BsaWI WCCGGW 1 cut(s) 1172
Bsc4I CCNNNNNNNGG 6 cut(s) 161, 869, 979, 1010, 1304, 2018
Bse118I RCCGGY 1 cut(s) 2078
Bse1I ACTGG 6 cut(s) 49, 379, 400, 622, 708, 1659
Bse3DI GCAATG 3 cut(s) 266, 1878, 1983
BseBI CCWGG 5 cut(s) 284, 463, 830, 1009, 1448
BseDI CCNNGG 4 cut(s) 978, 1008, 1539, 1606
BseGI GGATG 6 cut(s) 118, 237, 292, 607, 1214, 2122
BseLI CCNNNNNNNGG 6 cut(s) 161, 869, 979, 1010, 1304, 2018
BseMI GCAATG 3 cut(s) 266, 1878, 1983
BseMII CTCAG 5 cut(s) 95, 601, 1518, 1731, 1758
BseNI ACTGG 6 cut(s) 49, 379, 400, 622, 708, 1659
BseRI GAGGAG 2 cut(s) 1297, 1302
BseSI GKGCMC 2 cut(s) 185, 538
BseXI GCAGC 3 cut(s) 77, 655, 2105
BseYI CCCAGC 1 cut(s) 165
BsgI GTGCAG 2 cut(s) 335, 2043
BshFI GGCC 8 cut(s) 378, 828, 999, 1446, 1476, 1538, 1828, 2011
BshNI GGYRCC 1 cut(s) 2081
BsiHKAI GWGCWC 2 cut(s) 13, 185
BsiHKCI CYCGRG 1 cut(s) 12
BsiSI CCGG 2 cut(s) 1173, 2079
BslFI GGGAC 2 cut(s) 1212, 1732
BslI CCNNNNNNNGG 6 cut(s) 161, 869, 979, 1010, 1304, 2018
BsmAI GTCTC 2 cut(s) 554, 1284
BsmFI GGGAC 2 cut(s) 1212, 1732
BsnI GGCC 8 cut(s) 378, 828, 999, 1446, 1476, 1538, 1828, 2011
BsoBI CYCGRG 1 cut(s) 12
Bsp1286I GDGCHC 3 cut(s) 13, 185, 538
Bsp1407I TGTACA 1 cut(s) 803
BspACI CCGC 4 cut(s) 32, 275, 574, 646
BspANI GGCC 8 cut(s) 378, 828, 999, 1446, 1476, 1538, 1828, 2011
BspCNI CTCAG 5 cut(s) 94, 600, 1519, 1732, 1759
BspHI TCATGA 2 cut(s) 948, 1903
BspLI GGNNCC 4 cut(s) 456, 1150, 1737, 2083
BspMAI CTGCAG 1 cut(s) 645
BspPI GGATC 8 cut(s) 146, 691, 1195, 1315, 1438, 1730, 1743, 1910
BspQI GCTCTTC 1 cut(s) 1377
BspT107I GGYRCC 1 cut(s) 2081
BsrDI GCAATG 3 cut(s) 266, 1878, 1983
BsrFI RCCGGY 1 cut(s) 2078
BsrGI TGTACA 1 cut(s) 803
BsrI ACTGG 6 cut(s) 49, 379, 400, 622, 708, 1659
BssAI RCCGGY 1 cut(s) 2078
BssECI CCNNGG 4 cut(s) 978, 1008, 1539, 1606
BssNI GRCGYC 1 cut(s) 1132
BssSI CACGAG 1 cut(s) 531
BssT1I CCWWGG 1 cut(s) 1606
Bst2BI CACGAG 1 cut(s) 531
Bst2UI CCWGG 5 cut(s) 284, 463, 830, 1009, 1448
Bst4CI ACNGT 9 cut(s) 250, 565, 803, 848, 1353, 1406, 1483, 1761, 1866
Bst6I CTCTTC 3 cut(s) 1377, 1470, 1766
BstACI GRCGYC 1 cut(s) 1132
BstAUI TGTACA 1 cut(s) 803
BstBAI YACGTR 1 cut(s) 1304
BstC8I GCNNGC 1 cut(s) 273
BstDEI CTNAG 7 cut(s) 81, 227, 587, 1527, 1740, 1767, 2004
BstDSI CCRYGG 1 cut(s) 978
BstF5I GGATG 6 cut(s) 118, 237, 292, 607, 1214, 2122
BstHHI GCGC 2 cut(s) 1071, 1525
BstMAI GTCTC 2 cut(s) 554, 1284
BstMWI GCNNNNNNNGC 7 cut(s) 23, 71, 615, 1522, 1834, 2090, 2102
BstNI CCWGG 5 cut(s) 284, 463, 830, 1009, 1448
BstNSI RCATGY 1 cut(s) 100
BstSCI CCNGG 5 cut(s) 282, 461, 828, 1007, 1446
BstSFI CTRYAG 2 cut(s) 641, 865
BstSLI GKGCMC 2 cut(s) 185, 538
BstV1I GCAGC 3 cut(s) 77, 655, 2105
BstV2I GAAGAC 2 cut(s) 874, 1039
BstX2I RGATCY 3 cut(s) 1430, 1735, 2140
BstYI RGATCY 3 cut(s) 1430, 1735, 2140
BsuRI GGCC 8 cut(s) 378, 828, 999, 1446, 1476, 1538, 1828, 2011
BtgI CCRYGG 1 cut(s) 978
BtsCI GGATG 6 cut(s) 118, 237, 292, 607, 1214, 2122
BtsI GCAGTG 2 cut(s) 198, 2031
BtsIMutI CAGTG 6 cut(s) 198, 570, 595, 1348, 1690, 2031
Cac8I GCNNGC 1 cut(s) 273
CciI TCATGA 2 cut(s) 948, 1903
CfoI GCGC 2 cut(s) 1071, 1525
Cfr10I RCCGGY 1 cut(s) 2078
Cfr13I GGNCC 6 cut(s) 377, 997, 1148, 1346, 1474, 1603
CseI GACGC 2 cut(s) 1121, 2140
CsiI ACCWGGT 1 cut(s) 461
Csp6I GTAC 7 cut(s) 278, 569, 804, 1562, 1846, 1862, 1910
CspCI CAANNNNNGTGG 2 cut(s) 211, 246
CviAII CATG 7 cut(s) 97, 109, 400, 949, 1318, 1750, 1904
CviQI GTAC 7 cut(s) 278, 569, 804, 1562, 1846, 1862, 1910
DdeI CTNAG 7 cut(s) 81, 227, 587, 1527, 1740, 1767, 2004
EaeI YGGCCR 1 cut(s) 1444
Eam1104I CTCTTC 3 cut(s) 1377, 1470, 1766
EarI CTCTTC 3 cut(s) 1377, 1470, 1766
Eco130I CCWWGG 1 cut(s) 1606
Eco147I AGGCCT 1 cut(s) 2011
Eco47I GGWCC 3 cut(s) 1148, 1346, 1603
Eco57I CTGAAG 5 cut(s) 500, 807, 1074, 1409, 2085
Eco72I CACGTG 1 cut(s) 1304
Eco88I CYCGRG 1 cut(s) 12
EcoRI GAATTC 1 cut(s) 403
EcoRII CCWGG 5 cut(s) 282, 461, 828, 1007, 1446
EcoT14I CCWWGG 1 cut(s) 1606
ErhI CCWWGG 1 cut(s) 1606
FaeI CATG 7 cut(s) 100, 112, 403, 952, 1321, 1753, 1907
FaqI GGGAC 2 cut(s) 1212, 1732
FatI CATG 7 cut(s) 96, 108, 399, 948, 1317, 1749, 1903
FbaI TGATCA 2 cut(s) 1060, 1939
FblI GTMKAC 1 cut(s) 1989
Fnu4HI GCNGC 3 cut(s) 66, 644, 2094
FokI GGATG 6 cut(s) 125, 224, 299, 614, 1201, 2129
Fsp4HI GCNGC 3 cut(s) 66, 644, 2094
FspBI CTAG 4 cut(s) 135, 878, 1034, 2013
GlaI GCGC 2 cut(s) 1070, 1524
GluI GCNGC 3 cut(s) 66, 644, 2094
GsaI CCCAGC 1 cut(s) 169
GsuI CTGGAG 2 cut(s) 598, 1203
HaeIII GGCC 8 cut(s) 378, 828, 999, 1446, 1476, 1538, 1828, 2011
HapII CCGG 2 cut(s) 1173, 2079
HgaI GACGC 2 cut(s) 1121, 2140
HhaI GCGC 2 cut(s) 1071, 1525
Hin1I GRCGYC 1 cut(s) 1132
Hin1II CATG 7 cut(s) 100, 112, 403, 952, 1321, 1753, 1907
Hin6I GCGC 2 cut(s) 1069, 1523
HinP1I GCGC 2 cut(s) 1069, 1523
HincII GTYRAC 1 cut(s) 1764
HindII GTYRAC 1 cut(s) 1764
HindIII AAGCTT 1 cut(s) 479
HinfI GANTC 9 cut(s) 103, 730, 983, 1120, 1292, 1508, 1573, 1680, 1753
HpaI GTTAAC 1 cut(s) 1764
HpaII CCGG 2 cut(s) 1173, 2079
HphI GGTGA 4 cut(s) 154, 777, 1070, 1658
Hpy166II GTNNAC 5 cut(s) 183, 1349, 1564, 1764, 1990
Hpy188I TCNGA 5 cut(s) 264, 346, 451, 735, 1414
Hpy188III TCNNGA 9 cut(s) 83, 949, 1028, 1124, 1182, 1557, 1677, 1739, 1904
Hpy8I GTNNAC 5 cut(s) 183, 1349, 1564, 1764, 1990
HpyCH4III ACNGT 9 cut(s) 250, 565, 803, 848, 1353, 1406, 1483, 1761, 1866
HpyCH4IV ACGT 1 cut(s) 1303
HpyF10VI GCNNNNNNNGC 7 cut(s) 23, 71, 615, 1522, 1834, 2090, 2102
HpyF3I CTNAG 7 cut(s) 81, 227, 587, 1527, 1740, 1767, 2004
HpySE526I ACGT 1 cut(s) 1303
Hsp92I GRCGYC 1 cut(s) 1132
Hsp92II CATG 7 cut(s) 100, 112, 403, 952, 1321, 1753, 1907
HspAI GCGC 2 cut(s) 1069, 1523
Ksp22I TGATCA 2 cut(s) 1060, 1939
KspAI GTTAAC 1 cut(s) 1764
LguI GCTCTTC 1 cut(s) 1377
LmnI GCTCC 3 cut(s) 1085, 1361, 1807
Lsp1109I GCAGC 3 cut(s) 77, 655, 2105
LweI GCATC 4 cut(s) 204, 246, 866, 1223
MabI ACCWGGT 1 cut(s) 461
MaeI CTAG 4 cut(s) 135, 878, 1034, 2013
MaeII ACGT 1 cut(s) 1303
MaeIII GTNAC 5 cut(s) 92, 158, 783, 797, 1699
MboII GAAGA 8 cut(s) 828, 874, 1039, 1394, 1402, 1427, 1457, 1783
MflI RGATCY 3 cut(s) 1430, 1735, 2140
MhlI GDGCHC 3 cut(s) 13, 185, 538
MlsI TGGCCA 1 cut(s) 1446
MluNI TGGCCA 1 cut(s) 1446
MlyI GAGTC 4 cut(s) 739, 1114, 1286, 1747
MmeI TCCRAC 4 cut(s) 232, 429, 785, 1785
Mox20I TGGCCA 1 cut(s) 1446
MscI TGGCCA 1 cut(s) 1446
Msp20I TGGCCA 1 cut(s) 1446
MspA1I CMGCKG 3 cut(s) 646, 809, 1945
MspI CCGG 2 cut(s) 1173, 2079
MspR9I CCNGG 5 cut(s) 284, 463, 830, 1009, 1448
MvaI CCWGG 5 cut(s) 284, 463, 830, 1009, 1448
MwoI GCNNNNNNNGC 7 cut(s) 23, 71, 615, 1522, 1834, 2090, 2102
NlaIII CATG 7 cut(s) 100, 112, 403, 952, 1321, 1753, 1907
NlaIV GGNNCC 4 cut(s) 456, 1150, 1737, 2083
NmeAIII GCCGAG 1 cut(s) 1564
NmuCI GTSAC 2 cut(s) 158, 783
NspI RCATGY 1 cut(s) 100
PaeR7I CTCGAG 1 cut(s) 12
PagI TCATGA 2 cut(s) 948, 1903
PceI AGGCCT 1 cut(s) 2011
PciSI GCTCTTC 1 cut(s) 1377
PfeI GAWTC 5 cut(s) 103, 983, 1508, 1573, 1680
PflMI CCANNNNNTGG 1 cut(s) 1304
PkrI GCNGC 3 cut(s) 67, 645, 2095
PleI GAGTC 4 cut(s) 738, 1114, 1286, 1747
PmaCI CACGTG 1 cut(s) 1304
PmlI CACGTG 1 cut(s) 1304
PpsI GAGTC 4 cut(s) 738, 1114, 1286, 1747
Ppu21I YACGTR 1 cut(s) 1304
PshBI ATTAAT 2 cut(s) 494, 1244
Psp6I CCWGG 5 cut(s) 282, 461, 828, 1007, 1446
PspCI CACGTG 1 cut(s) 1304
PspFI CCCAGC 1 cut(s) 165
PspGI CCWGG 5 cut(s) 282, 461, 828, 1007, 1446
PspN4I GGNNCC 4 cut(s) 456, 1150, 1737, 2083
PspPI GGNCC 6 cut(s) 377, 997, 1148, 1346, 1474, 1603
PspXI VCTCGAGB 1 cut(s) 12
PstI CTGCAG 1 cut(s) 645
PsuI RGATCY 3 cut(s) 1430, 1735, 2140
PvuII CAGCTG 2 cut(s) 809, 1945
RsaI GTAC 7 cut(s) 279, 570, 805, 1563, 1847, 1863, 1911
RsaNI GTAC 7 cut(s) 278, 569, 804, 1562, 1846, 1862, 1910
SapI GCTCTTC 1 cut(s) 1377
SatI GCNGC 3 cut(s) 66, 644, 2094
Sau96I GGNCC 6 cut(s) 377, 997, 1148, 1346, 1474, 1603
ScaI AGTACT 1 cut(s) 1911
SchI GAGTC 4 cut(s) 739, 1114, 1286, 1747
ScrFI CCNGG 5 cut(s) 284, 463, 830, 1009, 1448
SduI GDGCHC 3 cut(s) 13, 185, 538
SexAI ACCWGGT 1 cut(s) 461
SfaNI GCATC 4 cut(s) 204, 246, 866, 1223
SfcI CTRYAG 2 cut(s) 641, 865
Sfr274I CTCGAG 1 cut(s) 12
SgrAI CRCCGGYG 1 cut(s) 2078
SinI GGWCC 3 cut(s) 1148, 1346, 1603
SlaI CTCGAG 1 cut(s) 12
SmlI CTYRAG 4 cut(s) 12, 935, 1028, 1707
SmoI CTYRAG 4 cut(s) 12, 935, 1028, 1707
SseBI AGGCCT 1 cut(s) 2011
SsiI CCGC 4 cut(s) 32, 275, 574, 646
SspI AATATT 1 cut(s) 1140
SspMI CTAG 4 cut(s) 135, 878, 1034, 2013
StuI AGGCCT 1 cut(s) 2011
StyD4I CCNGG 5 cut(s) 282, 461, 828, 1007, 1446
StyI CCWWGG 1 cut(s) 1606
TaaI ACNGT 9 cut(s) 250, 565, 803, 848, 1353, 1406, 1483, 1761, 1866
TaiI ACGT 1 cut(s) 1306
TaqI TCGA 3 cut(s) 13, 317, 1125
TatI WGTACW 4 cut(s) 803, 1561, 1845, 1909
TfiI GAWTC 5 cut(s) 103, 983, 1508, 1573, 1680
TscAI CASTG 6 cut(s) 205, 570, 595, 1348, 1690, 2031
TseFI GTSAC 2 cut(s) 158, 783
TseI GCWGC 3 cut(s) 65, 643, 2093
Tsp45I GTSAC 2 cut(s) 158, 783
TspDTI ATGAA 9 cut(s) 285, 416, 643, 874, 965, 1005, 1013, 1892, 1920
TspRI CASTG 6 cut(s) 205, 570, 595, 1348, 1690, 2031
Van91I CCANNNNNTGG 1 cut(s) 1304
VneI GTGCAC 1 cut(s) 181
VpaK11BI GGWCC 3 cut(s) 1148, 1346, 1603
VspI ATTAAT 2 cut(s) 494, 1244
XapI RAATTY 4 cut(s) 292, 403, 553, 904
XceI RCATGY 1 cut(s) 100
XhoI CTCGAG 1 cut(s) 12
XmiI GTMKAC 1 cut(s) 1989
XspI CTAG 4 cut(s) 135, 878, 1034, 2013
ZrmI AGTACT 1 cut(s) 1911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.