Rh7AG317500

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000487
Physical Location & Seq
Forward (+)
35689287 .. 35773040
83754 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG317500.1

Sequence Viewer

Length: 2649 bp
ATGGCGACTGCTAGTGATCAACAACTGAAATTGTATTCCTACTACAGGAGCTCTTGCTCTTTCCGTGTCCGAATTGCCCTCAACCTCAAAGGGCTCAAATACGAGTACAAAGCTGTAAACTTGTTGAAGGGAGAACAGTTTAGTCCTGAGTTTAGAAAGCTGAATCCTATCTGCTGTGTGCCGGTACTTGTGGATGGGGACATAGCTGTTTCTGATTCATTTGCCATATTATTGTATTTGGAAGAAAAGTACCCACAACATCCGTTGTTGCCTGAAGACCTTCAGCGAAAGGCCATTAACTTCCAGGCTGCAAATATTGTTTGCTCAAGCATACAGCCCCTTCTGAATCTGGCAGTACTGAATTATATAGAAGAAAGGGTTAGTCCAGATGCAAAAATTGAATGGGCTAAAGTTCATATTGGGAAAGGTTTTGCAGCACTTGAAGATCTACTGAAAAACTATGCAGGAAGATATGCAATTGGAGATGAAGTTTCTTTTGCAGATTTGTTCCTGGCGCCCCAGATTGATGCATCTTTTACAAGGTTCAATCTAGACATGACCCAGTTCCCCCTTTTGTCCAGTTACCCACAAGTTCAAGAGAAAAATTTCCACCAACTAAGGTTTTCGTTGAAGCATTTGGAATGTTGCAACATTGCCAACATAGTAATACTAACATGCATAACAATGGATCATAGAATTCAGGTGTTTCTGCTTCTTATATTCACGCCTTTTCTCGTTTTAGCAAACCATGAGACAAGTTCTCTGGATGTTACTGGTTTAAAGTCTCTAAGGGCACAATGGACTAACACGCCTCCAAGTTGGGGGACTCTGGATCCTTGTGAAGATGGTTGGGATGGCATTGGGTGTCACAACATGCGTGTGGTCTCTTTAACATTACCGAGTATGAATTTGACTGGCACACTCTCTGGAGATATTGGACAGTTATCTGAACTACAAGTTTTGGATCTATCTTACAACAAGGGCCTGACAGGACCACTCCCAGGAGAAATTAGCAGTTTGAAGAAGCTATCTAACATAATTCTGGTTGGTTGCGGCTTCTCTGGTCCCATACCTCCTACTATAGGGTCCCTCCAGGAGCTAATATTTCTGTCTCTGAATTCTAACGGATTTAGTGGGAGCATCCCATCTTCCATTGGTAATCTGTCTAAACTATATTGGCTGGATCTAGCTGACAACCACCTTGATGGACCCATCCCAGTTTCTCATGGTGGTGAACCTGGTCTTGACATGCTCAGTCATTGCAAGCACTTTCATCTCGGAATGAATAAGCTCTCAGGCCCAATTCCATCAAAGCTTTTTAGCTCAAACATGAGCCTGATACATGTGCTCTTCGAAAGTAATAAACTCACTGGCAGCATCCCTTCCAGCCTTGGACTTGTAACGTCTTTGGAGGTTGTGCGATTTGATGGAAACATGTTAACTGGGCCTATTCCTCTGAGCCTCAACAGTCTTACAAATGTTTCTCAGCTGTTCTTGTCTAATAACAAGCTGAGCGGCCCTGCTCCCAACCTTACTGGCATGAATCTTCTCCATTATGTAGATTTGAGCAATAATAGTTTCGACGTGTCTGATGTTCCACCATGGTTTTCAACACTAGAGTCTTTGACCACATTAATGATGGAGAACACACAACTTCAAGGAGAAATACCTGCTGCTCTATTCAGCCTTTTAAACCTACAGACTGTGGTCCTGAGGAACAACCAGCTCAATGGCACCTTGGATATTGGCACTACGAGCAGTCAATTGCAACTCATTGATTTACAAAAGAATTTAATTAGGGAATACGAAGAAAATGGAGGATACAATGGTACTTTAATACTTGCTCAAAATCCCGTTTGTGACGAAACTGGAGCGTCACCGAGTTACTGCAAGAGTTCACAATCATCTGATGTTGTCCCATATAAAACATTGCCAAATAACTGTATAGCCAGTCCCTGCGGTTCTGATCAGGTTTCAAGCCCCAACTGTAAATGTGCATATCCATATGTGGGTACTCTAATCTTTAGAGCTCCTACCTTCTCAGACTTGAAAACCTCAACTCGCTACAAAGAGCTTGAGAAGAATCTCACTGATTCTTTCTTGTCCCATAAACTTGGAGTCGATTCAGTCGCTTTGAGTAACCTCACCAAGGATTCGCATGCATACCTTAGTATGAACCTAGAAGTATTCCCACAAAGCCAAGATCGTTTCAATAGAAAGGAAGTTTCTATTATTGCTTTTCTACTCAGTAACCAAACATTCAAGCCTCAAAAATCTTTTGGACCATTCTATTTCATTGGTGATGATTATCAACACTTTGCAGGAGAAACTGCACAATCAGAATCAAACAAATCGTCTAATGTGGGCATTATTATTGGAGCAGCAGCTGGTGGTTCTGTTCTTGTGCTAATATTACTCCTTGTAGGAATTTATGCTATTCGCCAGAAGAGAAGGGCAAAAAGGGCCACTGATCAAAACAATCCTTTTGGCAAATGGGATGTGAATAATAAGACCAGAGGTAGCACTCCCCAATTAAAGGGGGCTAGATCGTTCTCTTTTGAAGAGCTCATGAAATACAGCAACAACTTTTCAGAAGCAAATGATGTTGGATCTGGGGGCTATGGGAAGGTAAGTCAGGAATCAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 Pkinase Pkinase_Tyr

Protein Analysis

882

Amino Acids

96.85

Weight (kDa)

5.91

Isoelectric Point (pI)

38.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GST_N PF02798 8 - 81 1.1e-14 Glutathione S-transferase, N-terminal domain
GST_N_3 PF13417 11 - 87 4.1e-14 Glutathione S-transferase, N-terminal domain
GST_N_2 PF13409 17 - 82 7.8e-15 Glutathione S-transferase, N-terminal domain
LRR_14 PF23598 291 - 396 6.6e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1678
AccB1I GGYRCC 2 cut(s) 514, 1733
AccBSI CCGCTC 1 cut(s) 1515
AciI CCGC 3 cut(s) 1053, 1515, 1959
AclWI GGATC 6 cut(s) 696, 827, 840, 972, 1191, 2617
AcsI RAATTY 6 cut(s) 604, 696, 907, 1117, 1789, 2427
AcuI CTGAAG 2 cut(s) 266, 294
AcyI GRCGYC 1 cut(s) 515
AfaI GTAC 6 cut(s) 107, 186, 251, 357, 1831, 2014
AfiI CCNNNNNNNGG 7 cut(s) 45, 821, 1001, 1082, 2009, 2149, 2536
AflIII ACRYGT 3 cut(s) 1342, 1434, 1584
AjiI CACGTC 1 cut(s) 1585
AjnI CCWGG 5 cut(s) 303, 510, 1000, 1092, 1237
Alw21I GWGCWC 4 cut(s) 53, 1350, 2032, 2568
Alw26I GTCTC 4 cut(s) 746, 789, 889, 1116
AlwI GGATC 6 cut(s) 696, 827, 840, 972, 1191, 2617
AlwNI CAGNNNCTG 2 cut(s) 1956, 2387
AoxI GGCC 6 cut(s) 291, 982, 1297, 1445, 1516, 2463
ApeKI GCWGC 6 cut(s) 308, 434, 1374, 1673, 2381, 2384
ApoI RAATTY 6 cut(s) 604, 696, 907, 1117, 1789, 2427
ArsI GACNNNNNNTTYG 2 cut(s) 2339, 2371
AseI ATTAAT 1 cut(s) 1634
Asp700I GAANNNNTTC 2 cut(s) 279, 605
AspLEI GCGC 1 cut(s) 517
AsuHPI GGTGA 4 cut(s) 1244, 1869, 2137, 2312
AsuII TTCGAA 1 cut(s) 1353
AvaII GGWCC 6 cut(s) 992, 1064, 1086, 1208, 1708, 2282
AxyI CCTNAGG 1 cut(s) 1712
BaeGI GKGCMC 1 cut(s) 796
BaeI ACNNNNGTAYC 2 cut(s) 1813, 1846
BamHI GGATCC 1 cut(s) 832
BanI GGYRCC 2 cut(s) 514, 1733
BanII GRGCYC 4 cut(s) 53, 96, 2032, 2568
BbsI GAAGAC 1 cut(s) 282
Bbv12I GWGCWC 4 cut(s) 53, 1350, 2032, 2568
BbvI GCAGC 6 cut(s) 295, 446, 1386, 1660, 2393, 2396
BccI CCATC 9 cut(s) 188, 839, 848, 1153, 1199, 1220, 1315, 1421, 1633
BciT130I CCWGG 5 cut(s) 305, 512, 1002, 1094, 1239
BciVI GTATCC 1 cut(s) 1814
BclI TGATCA 3 cut(s) 16, 1966, 2470
BcoDI GTCTC 4 cut(s) 746, 789, 889, 1116
BfaI CTAG 6 cut(s) 12, 551, 1187, 1616, 2180, 2544
BfmI CTRYAG 3 cut(s) 43, 1080, 1697
BfoI RGCGCY 1 cut(s) 518
BfuAI ACCTGC 1 cut(s) 1678
BfuI GTATCC 1 cut(s) 1814
BglII AGATCT 1 cut(s) 445
BisI GCNGC 8 cut(s) 309, 435, 1054, 1375, 1516, 1674, 2382, 2385
BlpI GCTNAGC 1 cut(s) 1511
BlsI GCNGC 8 cut(s) 310, 436, 1055, 1376, 1517, 1675, 2383, 2386
BmcAI AGTACT 1 cut(s) 357
Bme1390I CCNGG 5 cut(s) 305, 512, 1002, 1094, 1239
Bme18I GGWCC 6 cut(s) 992, 1064, 1086, 1208, 1708, 2282
BmgBI CACGTC 1 cut(s) 1585
BmiI GGNNCC 7 cut(s) 516, 834, 1066, 1087, 1088, 1210, 1735
BmrFI CCNGG 5 cut(s) 305, 512, 1002, 1094, 1239
BmrI ACTGGG 3 cut(s) 556, 1211, 1452
BmsI GCATC 5 cut(s) 379, 517, 539, 1149, 1386
BmuI ACTGGG 3 cut(s) 556, 1211, 1452
BoxI GACNNNNGTC 1 cut(s) 1706
BpiI GAAGAC 1 cut(s) 282
BpmI CTGGAG 3 cut(s) 948, 1076, 1890
Bpu1102I GCTNAGC 1 cut(s) 1511
Bpu14I TTCGAA 1 cut(s) 1353
BpuEI CTTGAG 2 cut(s) 310, 2096
BsaBI GATNNNNATC 1 cut(s) 2307
BsaHI GRCGYC 1 cut(s) 515
BsaI GGTCTC 1 cut(s) 889
BsaJI CCNNGG 5 cut(s) 1000, 1390, 1601, 1737, 2148
BsaXI ACNNNNNCTCC 2 cut(s) 474, 504
Bsc4I CCNNNNNNNGG 7 cut(s) 45, 821, 1001, 1082, 2009, 2149, 2536
Bse118I RCCGGY 1 cut(s) 181
Bse21I CCTNAGG 1 cut(s) 1712
Bse3DI GCAATG 3 cut(s) 651, 1258, 1928
Bse8I GATNNNNATC 1 cut(s) 2307
BseBI CCWGG 5 cut(s) 305, 512, 1002, 1094, 1239
BseDI CCNNGG 5 cut(s) 1000, 1390, 1601, 1737, 2148
BseGI GGATG 8 cut(s) 199, 259, 772, 859, 1140, 1212, 1377, 2503
BseJI GATNNNNATC 1 cut(s) 2307
BseLI CCNNNNNNNGG 7 cut(s) 45, 821, 1001, 1082, 2009, 2149, 2536
BseMI GCAATG 3 cut(s) 651, 1258, 1928
BseMII CTCAG 9 cut(s) 138, 1267, 1308, 1448, 1499, 1502, 1703, 2055, 2260
BseSI GKGCMC 1 cut(s) 796
BseXI GCAGC 6 cut(s) 295, 446, 1386, 1660, 2393, 2396
BsgI GTGCAG 1 cut(s) 2316
BshFI GGCC 6 cut(s) 293, 984, 1299, 1447, 1518, 2465
BshNI GGYRCC 2 cut(s) 514, 1733
BsiHKAI GWGCWC 4 cut(s) 53, 1350, 2032, 2568
BsiSI CCGG 1 cut(s) 182
BslFI GGGAC 7 cut(s) 212, 838, 1050, 1072, 1901, 1938, 2089
BslI CCNNNNNNNGG 7 cut(s) 45, 821, 1001, 1082, 2009, 2149, 2536
BsmAI GTCTC 4 cut(s) 746, 789, 889, 1116
BsmFI GGGAC 7 cut(s) 212, 838, 1050, 1072, 1901, 1938, 2089
BsnI GGCC 6 cut(s) 293, 984, 1299, 1447, 1518, 2465
Bso31I GGTCTC 1 cut(s) 889
Bsp119I TTCGAA 1 cut(s) 1353
Bsp1286I GDGCHC 6 cut(s) 53, 96, 796, 1350, 2032, 2568
Bsp1720I GCTNAGC 1 cut(s) 1511
Bsp19I CCATGG 1 cut(s) 1601
BspACI CCGC 3 cut(s) 1053, 1515, 1959
BspANI GGCC 6 cut(s) 293, 984, 1299, 1447, 1518, 2465
BspCNI CTCAG 9 cut(s) 139, 1266, 1307, 1449, 1498, 1503, 1704, 2054, 2259
BspHI TCATGA 1 cut(s) 2568
BspLI GGNNCC 7 cut(s) 516, 834, 1066, 1087, 1088, 1210, 1735
BspMI ACCTGC 1 cut(s) 1678
BspPI GGATC 6 cut(s) 696, 827, 840, 972, 1191, 2617
BspQI GCTCTTC 2 cut(s) 1355, 2556
BspT104I TTCGAA 1 cut(s) 1353
BspT107I GGYRCC 2 cut(s) 514, 1733
BspTNI GGTCTC 1 cut(s) 889
BsrBI CCGCTC 1 cut(s) 1515
BsrDI GCAATG 3 cut(s) 651, 1258, 1928
BsrFI RCCGGY 1 cut(s) 181
BssAI RCCGGY 1 cut(s) 181
BssECI CCNNGG 5 cut(s) 1000, 1390, 1601, 1737, 2148
BssNI GRCGYC 1 cut(s) 515
BssT1I CCWWGG 4 cut(s) 1390, 1601, 1737, 2148
Bst2UI CCWGG 5 cut(s) 305, 512, 1002, 1094, 1239
Bst4CI ACNGT 6 cut(s) 138, 942, 1469, 1705, 1943, 1988
Bst6I CTCTTC 3 cut(s) 1355, 2441, 2556
BstACI GRCGYC 1 cut(s) 515
BstBI TTCGAA 1 cut(s) 1353
BstC8I GCNNGC 2 cut(s) 1265, 2160
BstDSI CCRYGG 1 cut(s) 1601
BstENI CCTNNNNNAGG 3 cut(s) 43, 1080, 2147
BstF5I GGATG 8 cut(s) 199, 259, 772, 859, 1140, 1212, 1377, 2503
BstH2I RGCGCY 1 cut(s) 518
BstHHI GCGC 1 cut(s) 517
BstMAI GTCTC 4 cut(s) 746, 789, 889, 1116
BstMWI GCNNNNNNNGC 2 cut(s) 1755, 2462
BstNI CCWGG 5 cut(s) 305, 512, 1002, 1094, 1239
BstNSI RCATGY 6 cut(s) 678, 877, 1252, 1346, 1438, 2162
BstPAI GACNNNNGTC 1 cut(s) 1706
BstSCI CCNGG 5 cut(s) 303, 510, 1000, 1092, 1237
BstSFI CTRYAG 3 cut(s) 43, 1080, 1697
BstSLI GKGCMC 1 cut(s) 796
BstV1I GCAGC 6 cut(s) 295, 446, 1386, 1660, 2393, 2396
BstV2I GAAGAC 1 cut(s) 282
BstX2I RGATCY 5 cut(s) 445, 832, 964, 1183, 2609
BstXI CCANNNNNNTGG 3 cut(s) 1205, 1730, 2114
BstYI RGATCY 5 cut(s) 445, 832, 964, 1183, 2609
Bsu36I CCTNAGG 1 cut(s) 1712
BsuI GTATCC 1 cut(s) 1814
BsuRI GGCC 6 cut(s) 293, 984, 1299, 1447, 1518, 2465
BtgI CCRYGG 1 cut(s) 1601
BtrI CACGTC 1 cut(s) 1585
BtsCI GGATG 8 cut(s) 199, 259, 772, 859, 1140, 1212, 1377, 2503
BtsIMutI CAGTG 3 cut(s) 1368, 2088, 2466
BveI ACCTGC 1 cut(s) 1678
Cac8I GCNNGC 2 cut(s) 1265, 2160
CaiI CAGNNNCTG 2 cut(s) 1956, 2387
CciI TCATGA 1 cut(s) 2568
CfoI GCGC 1 cut(s) 517
Cfr10I RCCGGY 1 cut(s) 181
CseI GACGC 1 cut(s) 1863
CsiI ACCWGGT 1 cut(s) 1237
Csp6I GTAC 6 cut(s) 106, 185, 250, 356, 1830, 2013
CviQI GTAC 6 cut(s) 106, 185, 250, 356, 1830, 2013
DinI GGCGCC 1 cut(s) 516
DraI TTTAAA 2 cut(s) 780, 1692
Eam1104I CTCTTC 3 cut(s) 1355, 2441, 2556
EarI CTCTTC 3 cut(s) 1355, 2441, 2556
Ecl136II GAGCTC 3 cut(s) 51, 2030, 2566
Eco130I CCWWGG 4 cut(s) 1390, 1601, 1737, 2148
Eco24I GRGCYC 4 cut(s) 53, 96, 2032, 2568
Eco31I GGTCTC 1 cut(s) 889
Eco47I GGWCC 6 cut(s) 992, 1064, 1086, 1208, 1708, 2282
Eco53kI GAGCTC 3 cut(s) 51, 2030, 2566
Eco57I CTGAAG 2 cut(s) 266, 294
Eco81I CCTNAGG 1 cut(s) 1712
EcoICRI GAGCTC 3 cut(s) 51, 2030, 2566
EcoNI CCTNNNNNAGG 3 cut(s) 43, 1080, 2147
EcoO109I RGGNCCY 2 cut(s) 982, 1086
EcoRI GAATTC 2 cut(s) 696, 1117
EcoRII CCWGG 5 cut(s) 303, 510, 1000, 1092, 1237
EcoT14I CCWWGG 4 cut(s) 1390, 1601, 1737, 2148
EcoT22I ATGCAT 3 cut(s) 532, 680, 2164
EcoT38I GRGCYC 4 cut(s) 53, 96, 2032, 2568
EgeI GGCGCC 1 cut(s) 516
EheI GGCGCC 1 cut(s) 516
ErhI CCWWGG 4 cut(s) 1390, 1601, 1737, 2148
FaqI GGGAC 7 cut(s) 212, 838, 1050, 1072, 1901, 1938, 2089
FauNDI CATATG 1 cut(s) 2005
FbaI TGATCA 3 cut(s) 16, 1966, 2470
Fnu4HI GCNGC 8 cut(s) 309, 435, 1054, 1375, 1516, 1674, 2382, 2385
FokI GGATG 8 cut(s) 206, 246, 779, 866, 1127, 1199, 1364, 2510
FriOI GRGCYC 4 cut(s) 53, 96, 2032, 2568
Fsp4HI GCNGC 8 cut(s) 309, 435, 1054, 1375, 1516, 1674, 2382, 2385
FspBI CTAG 6 cut(s) 12, 551, 1187, 1616, 2180, 2544
GlaI GCGC 1 cut(s) 516
GluI GCNGC 8 cut(s) 309, 435, 1054, 1375, 1516, 1674, 2382, 2385
GsuI CTGGAG 3 cut(s) 948, 1076, 1890
HaeII RGCGCY 1 cut(s) 518
HaeIII GGCC 6 cut(s) 293, 984, 1299, 1447, 1518, 2465
HapII CCGG 1 cut(s) 182
HgaI GACGC 1 cut(s) 1863
HhaI GCGC 1 cut(s) 517
Hin1I GRCGYC 1 cut(s) 515
Hin6I GCGC 1 cut(s) 515
HinP1I GCGC 1 cut(s) 515
HincII GTYRAC 1 cut(s) 1440
HindII GTYRAC 1 cut(s) 1440
HindIII AAGCTT 1 cut(s) 1313
HpaI GTTAAC 1 cut(s) 1440
HpaII CCGG 1 cut(s) 182
HphI GGTGA 4 cut(s) 1244, 1869, 2137, 2312
Hpy166II GTNNAC 4 cut(s) 118, 1235, 1440, 1898
Hpy8I GTNNAC 4 cut(s) 118, 1235, 1440, 1898
Hpy99I CGWCG 1 cut(s) 1586
HpyAV CCTTC 7 cut(s) 121, 290, 350, 1392, 2047, 2445, 2620
HpyCH4III ACNGT 6 cut(s) 138, 942, 1469, 1705, 1943, 1988
HpyCH4IV ACGT 2 cut(s) 1403, 1584
HpyF10VI GCNNNNNNNGC 2 cut(s) 1755, 2462
HpySE526I ACGT 2 cut(s) 1403, 1584
Hsp92I GRCGYC 1 cut(s) 515
HspAI GCGC 1 cut(s) 515
KasI GGCGCC 1 cut(s) 514
KflI GGGWCCC 1 cut(s) 1086
Ksp22I TGATCA 3 cut(s) 16, 1966, 2470
KspAI GTTAAC 1 cut(s) 1440
LguI GCTCTTC 2 cut(s) 1355, 2556
LmnI GCTCC 7 cut(s) 48, 1096, 1137, 1528, 1871, 2035, 2378
Lsp1109I GCAGC 6 cut(s) 295, 446, 1386, 1660, 2393, 2396
LweI GCATC 5 cut(s) 379, 517, 539, 1149, 1386
MabI ACCWGGT 1 cut(s) 1237
MaeI CTAG 6 cut(s) 12, 551, 1187, 1616, 2180, 2544
MaeII ACGT 2 cut(s) 1403, 1584
MaeIII GTNAC 9 cut(s) 581, 769, 866, 1399, 1859, 1875, 1883, 2138, 2249
MbiI CCGCTC 1 cut(s) 1515
MfeI CAATTG 2 cut(s) 477, 1763
MflI RGATCY 5 cut(s) 445, 832, 964, 1183, 2609
MhlI GDGCHC 6 cut(s) 53, 96, 796, 1350, 2032, 2568
Mly113I GGCGCC 1 cut(s) 515
MlyI GAGTC 3 cut(s) 820, 1628, 2127
MmeI TCCRAC 1 cut(s) 2587
Mph1103I ATGCAT 3 cut(s) 532, 680, 2164
MroXI GAANNNNTTC 2 cut(s) 279, 605
MseI TTAA 9 cut(s) 297, 779, 890, 1439, 1634, 1691, 1793, 1835, 2534
MslI CAYNNNNRTG 5 cut(s) 683, 878, 1203, 1230, 1634
MspA1I CMGCKG 2 cut(s) 1489, 2387
MspI CCGG 1 cut(s) 182
MspR9I CCNGG 5 cut(s) 305, 512, 1002, 1094, 1239
MunI CAATTG 2 cut(s) 477, 1763
MvaI CCWGG 5 cut(s) 305, 512, 1002, 1094, 1239
MwoI GCNNNNNNNGC 2 cut(s) 1755, 2462
NarI GGCGCC 1 cut(s) 515
NcoI CCATGG 1 cut(s) 1601
NdeI CATATG 1 cut(s) 2005
NlaIV GGNNCC 7 cut(s) 516, 834, 1066, 1087, 1088, 1210, 1735
NmuCI GTSAC 3 cut(s) 866, 1859, 1875
NsiI ATGCAT 3 cut(s) 532, 680, 2164
NspI RCATGY 6 cut(s) 678, 877, 1252, 1346, 1438, 2162
NspV TTCGAA 1 cut(s) 1353
PaeI GCATGC 1 cut(s) 2162
PagI TCATGA 1 cut(s) 2568
PciI ACATGT 2 cut(s) 1342, 1434
PciSI GCTCTTC 2 cut(s) 1355, 2556
PdmI GAANNNNTTC 2 cut(s) 279, 605
PfoI TCCNGGA 1 cut(s) 1092
PkrI GCNGC 8 cut(s) 310, 436, 1055, 1376, 1517, 1675, 2383, 2386
PleI GAGTC 3 cut(s) 820, 1627, 2126
PluTI GGCGCC 1 cut(s) 518
PpsI GAGTC 3 cut(s) 820, 1627, 2126
PpuMI RGGWCCY 1 cut(s) 1086
PscI ACATGT 2 cut(s) 1342, 1434
PshAI GACNNNNGTC 1 cut(s) 1706
PshBI ATTAAT 1 cut(s) 1634
Psp124BI GAGCTC 3 cut(s) 53, 2032, 2568
Psp5II RGGWCCY 1 cut(s) 1086
Psp6I CCWGG 5 cut(s) 303, 510, 1000, 1092, 1237
PspGI CCWGG 5 cut(s) 303, 510, 1000, 1092, 1237
PspN4I GGNNCC 7 cut(s) 516, 834, 1066, 1087, 1088, 1210, 1735
PspPPI RGGWCCY 1 cut(s) 1086
PstNI CAGNNNCTG 2 cut(s) 1956, 2387
PsuI RGATCY 5 cut(s) 445, 832, 964, 1183, 2609
PvuII CAGCTG 2 cut(s) 1489, 2387
RsaI GTAC 6 cut(s) 107, 186, 251, 357, 1831, 2014
RsaNI GTAC 6 cut(s) 106, 185, 250, 356, 1830, 2013
RseI CAYNNNNRTG 5 cut(s) 683, 878, 1203, 1230, 1634
SacI GAGCTC 3 cut(s) 53, 2032, 2568
SapI GCTCTTC 2 cut(s) 1355, 2556
SaqAI TTAA 9 cut(s) 297, 779, 890, 1439, 1634, 1691, 1793, 1835, 2534
SatI GCNGC 8 cut(s) 309, 435, 1054, 1375, 1516, 1674, 2382, 2385
ScaI AGTACT 1 cut(s) 357
SchI GAGTC 3 cut(s) 820, 1628, 2127
ScrFI CCNGG 5 cut(s) 305, 512, 1002, 1094, 1239
SduI GDGCHC 6 cut(s) 53, 96, 796, 1350, 2032, 2568
SexAI ACCWGGT 1 cut(s) 1237
SfaNI GCATC 5 cut(s) 379, 517, 539, 1149, 1386
SfcI CTRYAG 3 cut(s) 43, 1080, 1697
SfoI GGCGCC 1 cut(s) 516
SfuI TTCGAA 1 cut(s) 1353
SinI GGWCC 6 cut(s) 992, 1064, 1086, 1208, 1708, 2282
SmiMI CAYNNNNRTG 5 cut(s) 683, 878, 1203, 1230, 1634
SmlI CTYRAG 2 cut(s) 325, 2075
SmoI CTYRAG 2 cut(s) 325, 2075
SphI GCATGC 1 cut(s) 2162
SsiI CCGC 3 cut(s) 1053, 1515, 1959
SspDI GGCGCC 1 cut(s) 514
SspI AATATT 3 cut(s) 316, 1104, 2412
SspMI CTAG 6 cut(s) 12, 551, 1187, 1616, 2180, 2544
SstI GAGCTC 3 cut(s) 53, 2032, 2568
StyD4I CCNGG 5 cut(s) 303, 510, 1000, 1092, 1237
StyI CCWWGG 4 cut(s) 1390, 1601, 1737, 2148
TaaI ACNGT 6 cut(s) 138, 942, 1469, 1705, 1943, 1988
TaiI ACGT 2 cut(s) 1406, 1587
TaqI TCGA 3 cut(s) 1353, 1581, 2121
TatI WGTACW 2 cut(s) 105, 355
TauI GCSGC 2 cut(s) 1056, 1518
Tru1I TTAA 9 cut(s) 297, 779, 890, 1439, 1634, 1691, 1793, 1835, 2534
Tru9I TTAA 9 cut(s) 297, 779, 890, 1439, 1634, 1691, 1793, 1835, 2534
TscAI CASTG 3 cut(s) 1375, 2095, 2473
TseFI GTSAC 3 cut(s) 866, 1859, 1875
TseI GCWGC 6 cut(s) 308, 434, 1374, 1673, 2381, 2384
Tsp45I GTSAC 3 cut(s) 866, 1859, 1875
TspGWI ACGGA 3 cut(s) 53, 252, 1140
TspRI CASTG 3 cut(s) 1375, 2095, 2473
VpaK11BI GGWCC 6 cut(s) 992, 1064, 1086, 1208, 1708, 2282
VspI ATTAAT 1 cut(s) 1634
XagI CCTNNNNNAGG 3 cut(s) 43, 1080, 2147
XapI RAATTY 6 cut(s) 604, 696, 907, 1117, 1789, 2427
XbaI TCTAGA 1 cut(s) 550
XceI RCATGY 6 cut(s) 678, 877, 1252, 1346, 1438, 2162
XcmI CCANNNNNNNNNTGG 1 cut(s) 1636
XmnI GAANNNNTTC 2 cut(s) 279, 605
XspI CTAG 6 cut(s) 12, 551, 1187, 1616, 2180, 2544
ZrmI AGTACT 1 cut(s) 357
Zsp2I ATGCAT 3 cut(s) 532, 680, 2164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.