Rh5BG290400

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000487
Physical Location & Seq
Reverse (-)
36909707 .. 36915901
6195 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG290400.1

Sequence Viewer

Length: 2265 bp
ATGGATTATATTTCCCTGAAGATTCTGATGCAAGCGTGGGACATAAGTTGGGTGGGCTCAGATCCTTGTGATGGCTGGAAAGGTATTGACTGCACGAATGCACGTGTTACGTCGATAATATTGGCAGGCATGGGTTTGAGAGGTCAGCTACCCAGCGATATCCAGTTGTTGTCCGAGCTAGAGACTCTGGACCTATCTTTGAATAAGGACCTGACCGGACCAATTCCAACATCAATTGGAAACTTGAAAAAACTAGTGAACTTAAACCTTGCTGGCTGCAGTTTCTCTGAGCCTATTCCTCACACTATAGGAACTTTGAAGAATCTATATTATCTAGATCTGAATAACAATAGACTGAGTGGGCAAATTCCGCCTTCAATTGGTGCTCTTTCAAATCTTTTCTATCTGGACCTAACTAGCAACAAACTTCAAGGATACATCCCAGTCAGTAGTGAGGTTACACCGGGTCTTGATATGTTACACAAGGCGCAGCATTTTCATTTAGGAGACAATCAGCTCTCAGGCGAAATTCCAACTCAACTTTTCAGCTCAAAGATGGTTCTGGTGCACTTGCTCTTGGATAGAAATAATCTAACTGGCGAGATCCCTTCCACACTCGGACTTGTACAGACTCTGGTGACAGTGCGCCTTGATTGGAATTCATTAAGTGGGCTGGTGCCTTCAAGCCTCAACAATCTTTCAAACATGACTGTACTGTACTTGTCTAACAATCAGTTGATTGGCCCAGTACCAAACCTTACCGGCATGAATCCTCTCAACTATGTGGATATGAGTAATAATACTTTTGATGTGTCAGAAGTTCCTGATTGGTTTTCAACCTTGCAGTTCTTGACGACATTAATAATGGAAAACACACGGCTTCAGGGACAAGTTCCTCAAGCCCTATTTGGCTTTTACAATTTGCAGACAGTGGTACTAAGGAACAACAGTCTCAATGGCTTCTTGGATATTGAAACCAATTACGGCAACCAACTGCGACTAATTGATTTGGAAAATAACTCCATTACTAATCTTACACAAAGTGGAGAATCCAACTATACATTGATACTTGTTGGTAATCCAATTTGTAATCAGACAAACATGGCCAAGAATTATTGCATTGTTTCTTCATCAGATTCCTTATACTCAACACCACCAAATAACTGTGCGCCCATTGGCTGTAGTTCGGGAAAAGTATCCAGCCCGAATTGTAAATGTGCACATCCTTACACAGTAACTCTAGTCTTCTTATATGTCAGTTTCTCAGACTTTGGAAACTCAACTTATTACACAGAGCTAGAGATCTCTCTCATCCAATCTTTTCGGACTTACAACATTCCTGTGGATTCAGTTTCTCTGGGTTCTCCTTTCTTCGACTTATTTTATAACTTTCACCTGATCCTAGAGGTTTTCCCATCTGATCAAGATCACTTCAACAAATCAGAAGCTTCAGCACTTGCTTCTGTGCTTAGTAACCAGACTCTCCCACGTCCCCCGTATTTTGGACCCTTCTCTGTTGCATTAAATTATGCTCACTTCGGAGGATCAAACAAGGCCTTGATAATTGGTGCAGCAGTTGGCTGTTCTGTGCTGCTGCTATCAATAGCACTTGTAGGGGTTTATGCTCTCCAACGAAAGAGGAGAGCAAATGATCAACGGAGCAGAGCCCCTTTGCACGCTTGGATATCAAAAAGCAGTCTTCCTCAGTTAAAAGGAGCAAGATTGTTTTCTTTTAAAGAGCTTAAGGATTGCACCAATAGTTTTTCAGAAGCAAATGATATTGGTTCCGGGGGTTATGGAAATGGGTACCTGGATCCTGAATATTATATGACTCAACAGTTGACTGAGAAGAGCGACGTGTATAGCTTTGGCGTGGTAATGTTGGAGCTGATAACTGCTAGAAGGCCAATAGAGCGTGGGAGGTATATTGTGAGAGTGGTACAGATGACAATGGATAGGAAAAAAGATTTGTACAACCTGCAAGAAATTCTTGATCCAGCCATCGGTTTAGTAACACAGCTGAAAGGTTTAGAAATGTTTGTCGATCTGGCAATGTCGTGTGTAAAAGAATTACGAGCTAGAAGGCCTAGAATGGGGGAAGTGGTGAAAGAGATAGAGAACATTATACAGATTGCAAGTTTGAACGCCGGAGCAAATTCAGCATCCACTTCAGCAGGTTATGAGGATGTGAGTAAGGATAGTAGCGAGGATCCCTACAGCGGTCATGTCCTTGATCATAGTCGGGTTTTCAACCTACAAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

754

Amino Acids

83.26

Weight (kDa)

5.47

Isoelectric Point (pI)

37.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 603 - 704 1.9e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1386
Acc36I ACCTGC 2 cut(s) 1986, 2165
Acc65I GGTACC 1 cut(s) 1806
AccB1I GGYRCC 2 cut(s) 676, 1806
AciI CCGC 2 cut(s) 371, 2220
AclWI GGATC 9 cut(s) 56, 598, 1393, 1552, 1808, 1821, 1988, 2204, 2217
AcoI YGGCCR 1 cut(s) 1104
AcsI RAATTY 5 cut(s) 366, 528, 658, 1986, 2155
AcuI CTGAAG 4 cut(s) 38, 866, 1434, 2154
AcvI CACGTG 1 cut(s) 104
AdeI CACNNNGTG 1 cut(s) 1043
AfaI GTAC 8 cut(s) 627, 714, 719, 750, 936, 1808, 1941, 1973
AfiI CCNNNNNNNGG 6 cut(s) 71, 380, 1502, 2003, 2093, 2219
AflII CTTAAG 1 cut(s) 1742
AflIII ACRYGT 2 cut(s) 103, 1857
AhlI ACTAGT 1 cut(s) 253
AjiI CACGTC 2 cut(s) 1490, 1858
AjnI CCWGG 1 cut(s) 1809
Alw21I GWGCWC 3 cut(s) 388, 570, 1222
Alw26I GTCTC 3 cut(s) 176, 501, 956
Alw44I GTGCAC 2 cut(s) 566, 1218
AlwI GGATC 9 cut(s) 56, 598, 1393, 1552, 1808, 1821, 1988, 2204, 2217
AlwNI CAGNNNCTG 1 cut(s) 634
AoxI GGCC 5 cut(s) 742, 1104, 1554, 1904, 2084
ApaLI GTGCAC 2 cut(s) 566, 1218
ApeKI GCWGC 5 cut(s) 276, 490, 1571, 1591, 1594
ApoI RAATTY 5 cut(s) 366, 528, 658, 1986, 2155
AseI ATTAAT 1 cut(s) 860
Asp718I GGTACC 1 cut(s) 1806
AspLEI GCGC 3 cut(s) 490, 648, 1171
AspS9I GGNCC 6 cut(s) 190, 208, 218, 409, 743, 1505
AsuC2I CCSGG 2 cut(s) 465, 1789
AsuHPI GGTGA 3 cut(s) 649, 1385, 2116
AvaII GGWCC 5 cut(s) 190, 208, 218, 409, 1505
BaeGI GKGCMC 2 cut(s) 570, 1222
BalI TGGCCA 1 cut(s) 1106
BamHI GGATCC 2 cut(s) 1813, 2209
BanI GGYRCC 2 cut(s) 676, 1806
BanII GRGCYC 2 cut(s) 59, 1669
BbrPI CACGTG 1 cut(s) 104
BbsI GAAGAC 2 cut(s) 1237, 1691
Bbv12I GWGCWC 3 cut(s) 388, 570, 1222
BbvI GCAGC 5 cut(s) 263, 502, 1578, 1581, 1583
BccI CCATC 4 cut(s) 65, 550, 1423, 2009
BceAI ACGGC 2 cut(s) 893, 1000
BciT130I CCWGG 1 cut(s) 1811
BciVI GTATCC 2 cut(s) 428, 1207
BclI TGATCA 3 cut(s) 1420, 1651, 2233
BcnI CCSGG 2 cut(s) 465, 1789
BcoDI GTCTC 3 cut(s) 176, 501, 956
BcuI ACTAGT 1 cut(s) 253
BfmI CTRYAG 4 cut(s) 277, 306, 1180, 2215
BfrI CTTAAG 1 cut(s) 1742
BfuAI ACCTGC 2 cut(s) 1986, 2165
BfuI GTATCC 2 cut(s) 428, 1207
BglII AGATCT 2 cut(s) 337, 1302
BisI GCNGC 5 cut(s) 277, 491, 1572, 1592, 1595
BlsI GCNGC 5 cut(s) 278, 492, 1573, 1593, 1596
Bme1390I CCNGG 3 cut(s) 465, 1789, 1811
Bme18I GGWCC 5 cut(s) 190, 208, 218, 409, 1505
BmgBI CACGTC 2 cut(s) 1490, 1858
BmgT120I GGNCC 6 cut(s) 190, 208, 218, 409, 743, 1505
BmiI GGNNCC 6 cut(s) 678, 1507, 1786, 1808, 1815, 2211
BmrFI CCNGG 3 cut(s) 465, 1789, 1811
BmrI ACTGGG 2 cut(s) 437, 740
BmsI GCATC 2 cut(s) 18, 2171
BmuI ACTGGG 2 cut(s) 437, 740
BpiI GAAGAC 2 cut(s) 1237, 1691
BpuEI CTTGAG 1 cut(s) 882
BpuMI CCSGG 2 cut(s) 465, 1789
BsaAI YACGTR 1 cut(s) 104
BsaBI GATNNNNATC 1 cut(s) 1425
BsaJI CCNNGG 1 cut(s) 1788
BsaWI WCCGGW 1 cut(s) 215
Bsc4I CCNNNNNNNGG 6 cut(s) 71, 380, 1502, 2003, 2093, 2219
Bse118I RCCGGY 1 cut(s) 761
Bse1I ACTGG 4 cut(s) 163, 443, 601, 746
Bse3DI GCAATG 1 cut(s) 2058
Bse8I GATNNNNATC 1 cut(s) 1425
BseBI CCWGG 1 cut(s) 1811
BseDI CCNNGG 1 cut(s) 1788
BseGI GGATG 5 cut(s) 438, 1222, 1311, 2162, 2191
BseJI GATNNNNATC 1 cut(s) 1425
BseLI CCNNNNNNNGG 6 cut(s) 71, 380, 1502, 2003, 2093, 2219
BseMI GCAATG 1 cut(s) 2058
BseMII CTCAG 7 cut(s) 72, 279, 347, 534, 1278, 1718, 1836
BseNI ACTGG 4 cut(s) 163, 443, 601, 746
BseRI GAGGAG 1 cut(s) 1654
BseSI GKGCMC 2 cut(s) 570, 1222
BseXI GCAGC 5 cut(s) 263, 502, 1578, 1581, 1583
BseYI CCCAGC 1 cut(s) 152
BsgI GTGCAG 2 cut(s) 76, 1590
BshFI GGCC 5 cut(s) 744, 1106, 1556, 1906, 2086
BshNI GGYRCC 2 cut(s) 676, 1806
BsiHKAI GWGCWC 3 cut(s) 388, 570, 1222
BsiSI CCGG 5 cut(s) 216, 464, 762, 1788, 2148
BslFI GGGAC 3 cut(s) 53, 900, 1476
BslI CCNNNNNNNGG 6 cut(s) 71, 380, 1502, 2003, 2093, 2219
BsmAI GTCTC 3 cut(s) 176, 501, 956
BsmFI GGGAC 3 cut(s) 53, 900, 1476
BsmI GAATGC 1 cut(s) 103
BsnI GGCC 5 cut(s) 744, 1106, 1556, 1906, 2086
Bsp1286I GDGCHC 5 cut(s) 59, 388, 570, 1222, 1669
Bsp1407I TGTACA 2 cut(s) 625, 1971
BspACI CCGC 2 cut(s) 371, 2220
BspANI GGCC 5 cut(s) 744, 1106, 1556, 1906, 2086
BspCNI CTCAG 7 cut(s) 71, 280, 348, 533, 1277, 1717, 1837
BspLI GGNNCC 6 cut(s) 678, 1507, 1786, 1808, 1815, 2211
BspMAI CTGCAG 1 cut(s) 281
BspMI ACCTGC 2 cut(s) 1986, 2165
BspPI GGATC 9 cut(s) 56, 598, 1393, 1552, 1808, 1821, 1988, 2204, 2217
BspQI GCTCTTC 1 cut(s) 1844
BspT107I GGYRCC 2 cut(s) 676, 1806
BspTI CTTAAG 1 cut(s) 1742
BsrDI GCAATG 1 cut(s) 2058
BsrFI RCCGGY 1 cut(s) 761
BsrGI TGTACA 2 cut(s) 625, 1971
BsrI ACTGG 4 cut(s) 163, 443, 601, 746
BssAI RCCGGY 1 cut(s) 761
BssECI CCNNGG 1 cut(s) 1788
Bst2UI CCWGG 1 cut(s) 1811
Bst4CI ACNGT 8 cut(s) 643, 712, 717, 931, 950, 1166, 1234, 1839
Bst6I CTCTTC 1 cut(s) 1844
BstAFI CTTAAG 1 cut(s) 1742
BstAUI TGTACA 2 cut(s) 625, 1971
BstBAI YACGTR 1 cut(s) 104
BstC8I GCNNGC 4 cut(s) 33, 127, 274, 1677
BstDEI CTNAG 9 cut(s) 58, 288, 356, 520, 938, 1264, 1469, 1704, 1845
BstF5I GGATG 5 cut(s) 438, 1222, 1311, 2162, 2191
BstHHI GCGC 3 cut(s) 490, 648, 1171
BstMAI GTCTC 3 cut(s) 176, 501, 956
BstMWI GCNNNNNNNGC 3 cut(s) 370, 1912, 2159
BstNI CCWGG 1 cut(s) 1811
BstSCI CCNGG 3 cut(s) 463, 1787, 1809
BstSFI CTRYAG 4 cut(s) 277, 306, 1180, 2215
BstSLI GKGCMC 2 cut(s) 570, 1222
BstV1I GCAGC 5 cut(s) 263, 502, 1578, 1581, 1583
BstV2I GAAGAC 2 cut(s) 1237, 1691
BstX2I RGATCY 6 cut(s) 61, 337, 603, 1302, 1813, 2209
BstYI RGATCY 6 cut(s) 61, 337, 603, 1302, 1813, 2209
BsuI GTATCC 2 cut(s) 428, 1207
BsuRI GGCC 5 cut(s) 744, 1106, 1556, 1906, 2086
BtrI CACGTC 2 cut(s) 1490, 1858
BtsCI GGATG 5 cut(s) 438, 1222, 1311, 2162, 2191
BtsIMutI CAGTG 2 cut(s) 648, 936
BveI ACCTGC 2 cut(s) 1986, 2165
Cac8I GCNNGC 4 cut(s) 33, 127, 274, 1677
CaiI CAGNNNCTG 1 cut(s) 634
CfoI GCGC 3 cut(s) 490, 648, 1171
Cfr10I RCCGGY 1 cut(s) 761
Cfr13I GGNCC 6 cut(s) 190, 208, 218, 409, 743, 1505
Csp6I GTAC 8 cut(s) 626, 713, 718, 749, 935, 1807, 1940, 1972
CviAII CATG 5 cut(s) 130, 706, 766, 1102, 2225
CviQI GTAC 8 cut(s) 626, 713, 718, 749, 935, 1807, 1940, 1972
DdeI CTNAG 9 cut(s) 58, 288, 356, 520, 938, 1264, 1469, 1704, 1845
DraI TTTAAA 1 cut(s) 1735
DraIII CACNNNGTG 1 cut(s) 1043
EaeI YGGCCR 1 cut(s) 1104
Eam1104I CTCTTC 1 cut(s) 1844
EarI CTCTTC 1 cut(s) 1844
EciI GGCGGA 1 cut(s) 360
Eco147I AGGCCT 2 cut(s) 1556, 2086
Eco24I GRGCYC 2 cut(s) 59, 1669
Eco32I GATATC 2 cut(s) 160, 1686
Eco47I GGWCC 5 cut(s) 190, 208, 218, 409, 1505
Eco57I CTGAAG 4 cut(s) 38, 866, 1434, 2154
Eco72I CACGTG 1 cut(s) 104
EcoO109I RGGNCCY 1 cut(s) 208
EcoRI GAATTC 1 cut(s) 658
EcoRII CCWGG 1 cut(s) 1809
EcoRV GATATC 2 cut(s) 160, 1686
EcoT38I GRGCYC 2 cut(s) 59, 1669
FaeI CATG 5 cut(s) 133, 709, 769, 1105, 2228
FalI AAGNNNNNCTT 2 cut(s) 1974, 2006
FaqI GGGAC 3 cut(s) 53, 900, 1476
FatI CATG 5 cut(s) 129, 705, 765, 1101, 2224
FbaI TGATCA 3 cut(s) 1420, 1651, 2233
Fnu4HI GCNGC 5 cut(s) 277, 491, 1572, 1592, 1595
FokI GGATG 5 cut(s) 425, 1209, 1298, 2149, 2198
FriOI GRGCYC 2 cut(s) 59, 1669
Fsp4HI GCNGC 5 cut(s) 277, 491, 1572, 1592, 1595
GlaI GCGC 3 cut(s) 489, 647, 1170
GluI GCNGC 5 cut(s) 277, 491, 1572, 1592, 1595
GsaI CCCAGC 1 cut(s) 156
HaeIII GGCC 5 cut(s) 744, 1106, 1556, 1906, 2086
HapII CCGG 5 cut(s) 216, 464, 762, 1788, 2148
HhaI GCGC 3 cut(s) 490, 648, 1171
Hin1II CATG 5 cut(s) 133, 709, 769, 1105, 2228
Hin6I GCGC 3 cut(s) 488, 646, 1169
HinP1I GCGC 3 cut(s) 488, 646, 1169
HincII GTYRAC 1 cut(s) 1842
HindII GTYRAC 1 cut(s) 1842
HindIII AAGCTT 1 cut(s) 1446
HpaII CCGG 5 cut(s) 216, 464, 762, 1788, 2148
HphI GGTGA 3 cut(s) 649, 1385, 2116
Hpy166II GTNNAC 4 cut(s) 259, 568, 1220, 1842
Hpy8I GTNNAC 4 cut(s) 259, 568, 1220, 1842
Hpy99I CGWCG 2 cut(s) 115, 1859
HpyAV CCTTC 6 cut(s) 384, 618, 690, 1519, 1896, 2076
HpyCH4III ACNGT 8 cut(s) 643, 712, 717, 931, 950, 1166, 1234, 1839
HpyCH4IV ACGT 4 cut(s) 103, 110, 1489, 1857
HpyF10VI GCNNNNNNNGC 3 cut(s) 370, 1912, 2159
HpyF3I CTNAG 9 cut(s) 58, 288, 356, 520, 938, 1264, 1469, 1704, 1845
HpySE526I ACGT 4 cut(s) 103, 110, 1489, 1857
Hsp92II CATG 5 cut(s) 133, 709, 769, 1105, 2228
HspAI GCGC 3 cut(s) 488, 646, 1169
KpnI GGTACC 1 cut(s) 1810
Ksp22I TGATCA 3 cut(s) 1420, 1651, 2233
LguI GCTCTTC 1 cut(s) 1844
LmnI GCTCC 4 cut(s) 1659, 1715, 1885, 2150
Lsp1109I GCAGC 5 cut(s) 263, 502, 1578, 1581, 1583
LweI GCATC 2 cut(s) 18, 2171
MaeII ACGT 4 cut(s) 103, 110, 1489, 1857
MaeIII GTNAC 7 cut(s) 106, 457, 477, 637, 1234, 1472, 2011
MboII GAAGA 7 cut(s) 31, 331, 1119, 1237, 1363, 1691, 1861
MfeI CAATTG 2 cut(s) 234, 378
MflI RGATCY 6 cut(s) 61, 337, 603, 1302, 1813, 2209
MhlI GDGCHC 5 cut(s) 59, 388, 570, 1222, 1669
MlsI TGGCCA 1 cut(s) 1106
MluNI TGGCCA 1 cut(s) 1106
MlyI GAGTC 4 cut(s) 178, 625, 1474, 1825
MmeI TCCRAC 5 cut(s) 251, 557, 1077, 1654, 1863
Mox20I TGGCCA 1 cut(s) 1106
MscI TGGCCA 1 cut(s) 1106
MseI TTAA 7 cut(s) 263, 665, 860, 1523, 1709, 1734, 1743
MslI CAYNNNNRTG 1 cut(s) 1340
Msp20I TGGCCA 1 cut(s) 1106
MspA1I CMGCKG 2 cut(s) 2020, 2220
MspCI CTTAAG 1 cut(s) 1742
MspI CCGG 5 cut(s) 216, 464, 762, 1788, 2148
MspR9I CCNGG 3 cut(s) 465, 1789, 1811
MunI CAATTG 2 cut(s) 234, 378
Mva1269I GAATGC 1 cut(s) 103
MvaI CCWGG 1 cut(s) 1811
MwoI GCNNNNNNNGC 3 cut(s) 370, 1912, 2159
NciI CCSGG 2 cut(s) 465, 1789
NlaIII CATG 5 cut(s) 133, 709, 769, 1105, 2228
NlaIV GGNNCC 6 cut(s) 678, 1507, 1786, 1808, 1815, 2211
NmuCI GTSAC 1 cut(s) 637
PceI AGGCCT 2 cut(s) 1556, 2086
PciSI GCTCTTC 1 cut(s) 1844
PctI GAATGC 1 cut(s) 103
PfeI GAWTC 6 cut(s) 22, 322, 769, 1049, 1136, 1346
PkrI GCNGC 5 cut(s) 278, 492, 1573, 1593, 1596
PleI GAGTC 4 cut(s) 178, 625, 1474, 1825
PmaCI CACGTG 1 cut(s) 104
PmlI CACGTG 1 cut(s) 104
PpsI GAGTC 4 cut(s) 178, 625, 1474, 1825
Ppu21I YACGTR 1 cut(s) 104
PpuMI RGGWCCY 1 cut(s) 208
PshBI ATTAAT 1 cut(s) 860
PsiI TTATAA 1 cut(s) 1386
Psp5II RGGWCCY 1 cut(s) 208
Psp6I CCWGG 1 cut(s) 1809
PspCI CACGTG 1 cut(s) 104
PspFI CCCAGC 1 cut(s) 152
PspGI CCWGG 1 cut(s) 1809
PspN4I GGNNCC 6 cut(s) 678, 1507, 1786, 1808, 1815, 2211
PspPI GGNCC 6 cut(s) 190, 208, 218, 409, 743, 1505
PspPPI RGGWCCY 1 cut(s) 208
PstI CTGCAG 1 cut(s) 281
PstNI CAGNNNCTG 1 cut(s) 634
PsuI RGATCY 6 cut(s) 61, 337, 603, 1302, 1813, 2209
PvuII CAGCTG 1 cut(s) 2020
RsaI GTAC 8 cut(s) 627, 714, 719, 750, 936, 1808, 1941, 1973
RsaNI GTAC 8 cut(s) 626, 713, 718, 749, 935, 1807, 1940, 1972
RseI CAYNNNNRTG 1 cut(s) 1340
SapI GCTCTTC 1 cut(s) 1844
SaqAI TTAA 7 cut(s) 263, 665, 860, 1523, 1709, 1734, 1743
SatI GCNGC 5 cut(s) 277, 491, 1572, 1592, 1595
Sau96I GGNCC 6 cut(s) 190, 208, 218, 409, 743, 1505
SchI GAGTC 4 cut(s) 178, 625, 1474, 1825
ScrFI CCNGG 3 cut(s) 465, 1789, 1811
SduI GDGCHC 5 cut(s) 59, 388, 570, 1222, 1669
SfaNI GCATC 2 cut(s) 18, 2171
SfcI CTRYAG 4 cut(s) 277, 306, 1180, 2215
SinI GGWCC 5 cut(s) 190, 208, 218, 409, 1505
SmiMI CAYNNNNRTG 1 cut(s) 1340
SmlI CTYRAG 2 cut(s) 897, 1742
SmoI CTYRAG 2 cut(s) 897, 1742
SpeI ACTAGT 1 cut(s) 253
SseBI AGGCCT 2 cut(s) 1556, 2086
SsiI CCGC 2 cut(s) 371, 2220
SspI AATATT 2 cut(s) 120, 1823
StuI AGGCCT 2 cut(s) 1556, 2086
StyD4I CCNGG 3 cut(s) 463, 1787, 1809
TaaI ACNGT 8 cut(s) 643, 712, 717, 931, 950, 1166, 1234, 1839
TaiI ACGT 4 cut(s) 106, 113, 1492, 1860
TaqI TCGA 3 cut(s) 113, 1374, 2043
TatI WGTACW 4 cut(s) 625, 712, 717, 1971
TfiI GAWTC 6 cut(s) 22, 322, 769, 1049, 1136, 1346
Tru1I TTAA 7 cut(s) 263, 665, 860, 1523, 1709, 1734, 1743
Tru9I TTAA 7 cut(s) 263, 665, 860, 1523, 1709, 1734, 1743
TscAI CASTG 2 cut(s) 648, 936
TseFI GTSAC 1 cut(s) 637
TseI GCWGC 5 cut(s) 276, 490, 1571, 1591, 1594
Tsp45I GTSAC 1 cut(s) 637
TspDTI ATGAA 4 cut(s) 488, 651, 782, 1119
TspGWI ACGGA 1 cut(s) 1672
TspRI CASTG 2 cut(s) 648, 936
Vha464I CTTAAG 1 cut(s) 1742
VneI GTGCAC 2 cut(s) 566, 1218
VpaK11BI GGWCC 5 cut(s) 190, 208, 218, 409, 1505
VspI ATTAAT 1 cut(s) 860
XapI RAATTY 5 cut(s) 366, 528, 658, 1986, 2155
XbaI TCTAGA 1 cut(s) 334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.