Rroxscaffold_1G00038360

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000487
Physical Location & Seq
Forward (+)
55766698 .. 55772560
5863 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00038360.1

Sequence Viewer

Length: 1866 bp
ATGAATCTCCTCAACTATGTGGATATGAGTAATAATACTTTTGATGTGTCAGAAGTTCCTGATTGGTTTTCAACCTTGCAGTTCTTGACTACATTAATAATGGAAAACACACGGCTTCAGGGACAAGTTCCTCGAGCCCTATTTGGCTTTTACAATTTGCAGACAGTGGTACTAAGGAACAACAATCTCAATGGCTTGTTGGATATTGAAACCAATTACGGCAACCAATTGCAACTAATTGATTTGGAAAAGAACTCCATTACTAATCTTACACAAAGTGGAGAATCCAACTATACATTGATACTTGTTGGTAATCCAATTTGTAATCAGACAAACATGGCCAAGAATTATTGCATTGTTGCTTCATCAGATTCCTTATACTCAACACCACCAAATAACTGTGTGCCCATTGGCTGTAGTTCGGGAAAAGTTTCCAGCCCGAATTGTAAATGTGCACATCCTTACACAGTAACTCTAGTCTTCTTATATGTCAGTTTCTCAGACTTTGGAAACTCAACTTATTACACAGAGCTAGAGATCTCTCTCAACCAATCTTTTTGGACTTACAACATTCCTGTGGATTCAGTTTCTCTGGGTTCTCCTTTCTTCGACTTATTTTATTACTTTCACCTGATCCTAGAGGTTTTCCCATCTGATCAAGATCACTTCAACAAATCAGAAGCTTCAGCACTTTCTTCTGTGCTTAGTAACCAGACTCTCCCACGTCCCCCGTATTTTGGACCCTTCTCTGTTGCATTAAATTATGCTCACTTCGGAGGATCAAACAAGGCCTTGATAATTGGTGCAGCAGTTGGCTGTTCTGTGCTTCTGTTATCAATAGCACTTGTAGGGGTTTATGCTCTCCAACAAAAGAGGAGAGCAAATGAGCAACGAAGCAGAGCAGACGAGCAACGGAGCAGAGCACTCCCTTTGCAGGCTTGGATATCAAGCAGCAGTCTTCCTCAGTTAAAAGGAGCAAGATTGTTTTCTTTTAAAGAGCTTAAGGATTGCACCAATAGTTTTTCAGAAGCAAATGATATTGGTTCCGGGGGTTATGGAAAGGTGTATCAGGGAGTACTTCCAACAGGCGAAATGGTTGCCATTAAACGAGCTAAAAGGGAATCTATCCAGGAAGGGATTGAGTTCAAAGCTGAGGTTGAGCTGCTTTCAAGGGTACATCATAAGAATCTTGTGAGCCTTGTTGGTTTTTGTTTGGAGCAAGATGAACAAATGTTGGTATACGAGTATGTTCCAAATGGTAACTTGATGGATAGTCTTTCAGGGAAGTCAGGATTTAGGTTGAACTGGATGAGGAGACTTAAAGTAGCCCTTGGCGCAGCGAGAGGACTGGCCTATCTTCATGAGCATGCAACCCCATCTATTATACACCGGGATGTTAAACCAAACAATATCCTACTAGATAAAGATTTAAATACAAAAGTTGCCGATTTTGGTCTCTCCAAGTCTATGGCTGGTAGTGGAAGGGATCATGTGACTACTCAAGTTAAGGGGACAATGAGCGACGTGTATAGCTTTGGCGTGGTAATGTTGGAGCTGATAACTGCTAGAAGGCCAATAGAGCGTGGGAGGTATATTGTGAGAGTGGTACAGATGACAATGGATAGGACAAAAGATTTGTACAACCTGCAAGAAATTCTTGATCCAGCCATAGGTTTAGTAACAGAGCTGAAAGGTTTAGAAATGTTTGTCGATCTGGCAATGTCGTGTGTAAAAGAATTACGAGCTAGAAGGCCTAGAATGGGGGAAGTGGTGAAAGAGATAGAGAACATTATACAGATTGCAAGTTTGAACGCCGGAGCAAATTCAGCATCCACTTCAGCAGGTTATAAGGATGAATGGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

621

Amino Acids

69.11

Weight (kDa)

6.58

Isoelectric Point (pI)

40.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 342 - 591 7.2e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 345 - 593 1e-36 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1848
Acc36I ACCTGC 2 cut(s) 1653, 1832
AccI GTMKAC 1 cut(s) 1239
AclWI GGATC 4 cut(s) 628, 787, 1494, 1655
AcoI YGGCCR 1 cut(s) 339
AcsI RAATTY 2 cut(s) 1653, 1822
AcuI CTGAAG 3 cut(s) 101, 669, 1821
AdeI CACNNNGTG 1 cut(s) 278
AfaI GTAC 5 cut(s) 171, 1077, 1176, 1608, 1640
AfiI CCNNNNNNNGG 4 cut(s) 737, 934, 1670, 1760
AflII CTTAAG 1 cut(s) 1001
AflIII ACRYGT 1 cut(s) 1524
AgsI TTSAA 7 cut(s) 72, 209, 670, 1147, 1170, 1303, 1810
AjiI CACGTC 2 cut(s) 725, 1525
AjnI CCWGG 1 cut(s) 1128
Alw21I GWGCWC 2 cut(s) 457, 925
Alw26I GTCTC 2 cut(s) 1309, 1460
Alw44I GTGCAC 1 cut(s) 453
AlwI GGATC 4 cut(s) 628, 787, 1494, 1655
Ama87I CYCGRG 1 cut(s) 132
AoxI GGCC 5 cut(s) 339, 789, 1350, 1571, 1751
ApaLI GTGCAC 1 cut(s) 453
ApeKI GCWGC 4 cut(s) 806, 951, 1162, 1337
ApoI RAATTY 2 cut(s) 1653, 1822
ArsI GACNNNNNNTTYG 2 cut(s) 1618, 1650
AseI ATTAAT 1 cut(s) 95
Asp700I GAANNNNTTC 1 cut(s) 430
AspLEI GCGC 1 cut(s) 1337
AspS9I GGNCC 1 cut(s) 740
AsuC2I CCSGG 2 cut(s) 1048, 1391
AsuHPI GGTGA 2 cut(s) 620, 1783
AvaI CYCGRG 1 cut(s) 132
AvaII GGWCC 1 cut(s) 740
BaeGI GKGCMC 2 cut(s) 408, 457
BalI TGGCCA 1 cut(s) 341
BanII GRGCYC 1 cut(s) 139
BbsI GAAGAC 2 cut(s) 472, 950
Bbv12I GWGCWC 2 cut(s) 457, 925
BbvCI CCTCAGC 1 cut(s) 1152
BbvI GCAGC 4 cut(s) 818, 963, 1149, 1349
BccI CCATC 3 cut(s) 658, 1261, 1384
BceAI ACGGC 2 cut(s) 128, 235
BcgI CGANNNNNNTGC 2 cut(s) 1079, 1113
BciT130I CCWGG 1 cut(s) 1130
BclI TGATCA 1 cut(s) 655
BcnI CCSGG 2 cut(s) 1048, 1391
BcoDI GTCTC 2 cut(s) 1309, 1460
BfaI CTAG 7 cut(s) 476, 533, 638, 1418, 1566, 1746, 1755
BfmI CTRYAG 1 cut(s) 415
BfrI CTTAAG 1 cut(s) 1001
BfuAI ACCTGC 2 cut(s) 1653, 1832
BglII AGATCT 1 cut(s) 537
BisI GCNGC 4 cut(s) 807, 952, 1163, 1338
BlsI GCNGC 4 cut(s) 808, 953, 1164, 1339
BmcAI AGTACT 1 cut(s) 1077
Bme1390I CCNGG 3 cut(s) 1048, 1130, 1391
Bme18I GGWCC 1 cut(s) 740
BmeT110I CYCGRG 1 cut(s) 132
BmgBI CACGTC 2 cut(s) 725, 1525
BmgT120I GGNCC 1 cut(s) 740
BmiI GGNNCC 2 cut(s) 742, 1045
BmrFI CCNGG 3 cut(s) 1048, 1130, 1391
BmsI GCATC 1 cut(s) 1838
BpiI GAAGAC 2 cut(s) 472, 950
Bpu10I CCTNAGC 1 cut(s) 1152
BpuEI CTTGAG 1 cut(s) 1485
BpuMI CCSGG 2 cut(s) 1048, 1391
BsaBI GATNNNNATC 1 cut(s) 660
BsaI GGTCTC 1 cut(s) 1460
BsaJI CCNNGG 2 cut(s) 1047, 1330
Bsc4I CCNNNNNNNGG 4 cut(s) 737, 934, 1670, 1760
Bse1I ACTGG 2 cut(s) 1310, 1353
Bse3DI GCAATG 1 cut(s) 1725
Bse8I GATNNNNATC 1 cut(s) 660
BseBI CCWGG 1 cut(s) 1130
BseDI CCNNGG 2 cut(s) 1047, 1330
BseGI GGATG 5 cut(s) 457, 1314, 1399, 1829, 1858
BseJI GATNNNNATC 1 cut(s) 660
BseLI CCNNNNNNNGG 4 cut(s) 737, 934, 1670, 1760
BseMI GCAATG 1 cut(s) 1725
BseMII CTCAG 3 cut(s) 513, 977, 1143
BseNI ACTGG 2 cut(s) 1310, 1353
BseRI GAGGAG 2 cut(s) 889, 1327
BseSI GKGCMC 2 cut(s) 408, 457
BseXI GCAGC 4 cut(s) 818, 963, 1149, 1349
BsgI GTGCAG 1 cut(s) 825
BshFI GGCC 5 cut(s) 341, 791, 1352, 1573, 1753
BsiHKAI GWGCWC 2 cut(s) 457, 925
BsiHKCI CYCGRG 1 cut(s) 132
BsiSI CCGG 3 cut(s) 1047, 1390, 1815
BslFI GGGAC 3 cut(s) 135, 711, 1525
BslI CCNNNNNNNGG 4 cut(s) 737, 934, 1670, 1760
BsmAI GTCTC 2 cut(s) 1309, 1460
BsmFI GGGAC 3 cut(s) 135, 711, 1525
BsnI GGCC 5 cut(s) 341, 791, 1352, 1573, 1753
Bso31I GGTCTC 1 cut(s) 1460
BsoBI CYCGRG 1 cut(s) 132
Bsp1286I GDGCHC 4 cut(s) 139, 408, 457, 925
Bsp1407I TGTACA 1 cut(s) 1638
Bsp143I GATC 8 cut(s) 537, 633, 655, 661, 779, 1486, 1660, 1711
BspANI GGCC 5 cut(s) 341, 791, 1352, 1573, 1753
BspCNI CTCAG 3 cut(s) 512, 976, 1144
BspHI TCATGA 1 cut(s) 1360
BspLI GGNNCC 2 cut(s) 742, 1045
BspMI ACCTGC 2 cut(s) 1653, 1832
BspPI GGATC 4 cut(s) 628, 787, 1494, 1655
BspTI CTTAAG 1 cut(s) 1001
BspTNI GGTCTC 1 cut(s) 1460
BsrDI GCAATG 1 cut(s) 1725
BsrGI TGTACA 1 cut(s) 1638
BsrI ACTGG 2 cut(s) 1310, 1353
BssECI CCNNGG 2 cut(s) 1047, 1330
BssMI GATC 8 cut(s) 537, 633, 655, 661, 779, 1486, 1660, 1711
BssNAI GTATAC 1 cut(s) 1240
BssT1I CCWWGG 1 cut(s) 1330
Bst1107I GTATAC 1 cut(s) 1240
Bst2UI CCWGG 1 cut(s) 1130
Bst4CI ACNGT 3 cut(s) 166, 401, 469
BstAFI CTTAAG 1 cut(s) 1001
BstAUI TGTACA 1 cut(s) 1638
BstC8I GCNNGC 2 cut(s) 936, 1368
BstDEI CTNAG 5 cut(s) 173, 499, 704, 963, 1152
BstF5I GGATG 5 cut(s) 457, 1314, 1399, 1829, 1858
BstHHI GCGC 1 cut(s) 1337
BstKTI GATC 8 cut(s) 540, 636, 658, 664, 782, 1489, 1663, 1714
BstMAI GTCTC 2 cut(s) 1309, 1460
BstMBI GATC 8 cut(s) 537, 633, 655, 661, 779, 1486, 1660, 1711
BstMWI GCNNNNNNNGC 3 cut(s) 1334, 1579, 1826
BstNI CCWGG 1 cut(s) 1130
BstNSI RCATGY 1 cut(s) 1370
BstSCI CCNGG 3 cut(s) 1046, 1128, 1389
BstSFI CTRYAG 1 cut(s) 415
BstSLI GKGCMC 2 cut(s) 408, 457
BstV1I GCAGC 4 cut(s) 818, 963, 1149, 1349
BstV2I GAAGAC 2 cut(s) 472, 950
BstX2I RGATCY 1 cut(s) 537
BstXI CCANNNNNNTGG 1 cut(s) 1468
BstYI RGATCY 1 cut(s) 537
BstZ17I GTATAC 1 cut(s) 1240
BsuRI GGCC 5 cut(s) 341, 791, 1352, 1573, 1753
BtrI CACGTC 2 cut(s) 725, 1525
BtsCI GGATG 5 cut(s) 457, 1314, 1399, 1829, 1858
BtsIMutI CAGTG 1 cut(s) 171
BveI ACCTGC 2 cut(s) 1653, 1832
Cac8I GCNNGC 2 cut(s) 936, 1368
CciI TCATGA 1 cut(s) 1360
CfoI GCGC 1 cut(s) 1337
Cfr13I GGNCC 1 cut(s) 740
Csp6I GTAC 5 cut(s) 170, 1076, 1175, 1607, 1639
CviAII CATG 4 cut(s) 337, 1361, 1367, 1490
CviQI GTAC 5 cut(s) 170, 1076, 1175, 1607, 1639
DdeI CTNAG 5 cut(s) 173, 499, 704, 963, 1152
DpnI GATC 8 cut(s) 539, 635, 657, 663, 781, 1488, 1662, 1713
DpnII GATC 8 cut(s) 537, 633, 655, 661, 779, 1486, 1660, 1711
DraI TTTAAA 2 cut(s) 994, 1431
DraIII CACNNNGTG 1 cut(s) 278
EaeI YGGCCR 1 cut(s) 339
Eco130I CCWWGG 1 cut(s) 1330
Eco147I AGGCCT 2 cut(s) 791, 1753
Eco24I GRGCYC 1 cut(s) 139
Eco31I GGTCTC 1 cut(s) 1460
Eco32I GATATC 1 cut(s) 945
Eco47I GGWCC 1 cut(s) 740
Eco57I CTGAAG 3 cut(s) 101, 669, 1821
Eco88I CYCGRG 1 cut(s) 132
EcoRII CCWGG 1 cut(s) 1128
EcoRV GATATC 1 cut(s) 945
EcoT14I CCWWGG 1 cut(s) 1330
EcoT38I GRGCYC 1 cut(s) 139
ErhI CCWWGG 1 cut(s) 1330
FaeI CATG 4 cut(s) 340, 1364, 1370, 1493
FalI AAGNNNNNCTT 4 cut(s) 1314, 1346, 1641, 1673
FaqI GGGAC 3 cut(s) 135, 711, 1525
FatI CATG 4 cut(s) 336, 1360, 1366, 1489
FbaI TGATCA 1 cut(s) 655
FblI GTMKAC 1 cut(s) 1239
Fnu4HI GCNGC 4 cut(s) 807, 952, 1163, 1338
FokI GGATG 4 cut(s) 444, 1321, 1406, 1816
FriOI GRGCYC 1 cut(s) 139
Fsp4HI GCNGC 4 cut(s) 807, 952, 1163, 1338
FspBI CTAG 7 cut(s) 476, 533, 638, 1418, 1566, 1746, 1755
GlaI GCGC 1 cut(s) 1336
GluI GCNGC 4 cut(s) 807, 952, 1163, 1338
HaeIII GGCC 5 cut(s) 341, 791, 1352, 1573, 1753
HapII CCGG 3 cut(s) 1047, 1390, 1815
HhaI GCGC 1 cut(s) 1337
Hin1II CATG 4 cut(s) 340, 1364, 1370, 1493
Hin6I GCGC 1 cut(s) 1335
HinP1I GCGC 1 cut(s) 1335
HindIII AAGCTT 1 cut(s) 681
HinfI GANTC 7 cut(s) 4, 284, 371, 581, 715, 1121, 1186
HpaII CCGG 3 cut(s) 1047, 1390, 1815
HphI GGTGA 2 cut(s) 620, 1783
Hpy166II GTNNAC 2 cut(s) 455, 1240
Hpy188I TCNGA 8 cut(s) 52, 330, 370, 502, 655, 679, 776, 1027
Hpy188III TCNNGA 7 cut(s) 59, 85, 423, 659, 1290, 1361, 1658
Hpy8I GTNNAC 2 cut(s) 455, 1240
Hpy99I CGWCG 1 cut(s) 1526
HpyAV CCTTC 5 cut(s) 754, 1127, 1476, 1563, 1743
HpyCH4III ACNGT 3 cut(s) 166, 401, 469
HpyCH4IV ACGT 2 cut(s) 724, 1524
HpyF10VI GCNNNNNNNGC 3 cut(s) 1334, 1579, 1826
HpyF3I CTNAG 5 cut(s) 173, 499, 704, 963, 1152
HpySE526I ACGT 2 cut(s) 724, 1524
Hsp92II CATG 4 cut(s) 340, 1364, 1370, 1493
HspAI GCGC 1 cut(s) 1335
Ksp22I TGATCA 1 cut(s) 655
Kzo9I GATC 8 cut(s) 537, 633, 655, 661, 779, 1486, 1660, 1711
LmnI GCTCC 5 cut(s) 915, 974, 1216, 1552, 1817
Lsp1109I GCAGC 4 cut(s) 818, 963, 1149, 1349
LweI GCATC 1 cut(s) 1838
MaeI CTAG 7 cut(s) 476, 533, 638, 1418, 1566, 1746, 1755
MaeII ACGT 2 cut(s) 724, 1524
MaeIII GTNAC 5 cut(s) 469, 707, 1259, 1492, 1678
MalI GATC 8 cut(s) 539, 635, 657, 663, 781, 1488, 1662, 1713
MboI GATC 8 cut(s) 537, 633, 655, 661, 779, 1486, 1660, 1711
MboII GAAGA 5 cut(s) 472, 598, 687, 950, 1349
MfeI CAATTG 1 cut(s) 227
MflI RGATCY 1 cut(s) 537
MhlI GDGCHC 4 cut(s) 139, 408, 457, 925
MlsI TGGCCA 1 cut(s) 341
MluNI TGGCCA 1 cut(s) 341
MlyI GAGTC 1 cut(s) 709
MmeI TCCRAC 5 cut(s) 180, 312, 889, 1106, 1530
Mox20I TGGCCA 1 cut(s) 341
MroXI GAANNNNTTC 1 cut(s) 430
MscI TGGCCA 1 cut(s) 341
MslI CAYNNNNRTG 3 cut(s) 575, 1365, 1392
Msp20I TGGCCA 1 cut(s) 341
MspCI CTTAAG 1 cut(s) 1001
MspI CCGG 3 cut(s) 1047, 1390, 1815
MspR9I CCNGG 3 cut(s) 1048, 1130, 1391
MunI CAATTG 1 cut(s) 227
MvaI CCWGG 1 cut(s) 1130
MwoI GCNNNNNNNGC 3 cut(s) 1334, 1579, 1826
NciI CCSGG 2 cut(s) 1048, 1391
NdeII GATC 8 cut(s) 537, 633, 655, 661, 779, 1486, 1660, 1711
NlaIII CATG 4 cut(s) 340, 1364, 1370, 1493
NlaIV GGNNCC 2 cut(s) 742, 1045
NmuCI GTSAC 1 cut(s) 1492
NspI RCATGY 1 cut(s) 1370
PaeI GCATGC 1 cut(s) 1370
PaeR7I CTCGAG 1 cut(s) 132
PagI TCATGA 1 cut(s) 1360
PceI AGGCCT 2 cut(s) 791, 1753
PdmI GAANNNNTTC 1 cut(s) 430
PfeI GAWTC 6 cut(s) 4, 284, 371, 581, 1121, 1186
PfoI TCCNGGA 1 cut(s) 1128
PkrI GCNGC 4 cut(s) 808, 953, 1164, 1339
PleI GAGTC 1 cut(s) 709
PpsI GAGTC 1 cut(s) 709
PshBI ATTAAT 1 cut(s) 95
PsiI TTATAA 1 cut(s) 1848
Psp6I CCWGG 1 cut(s) 1128
PspGI CCWGG 1 cut(s) 1128
PspN4I GGNNCC 2 cut(s) 742, 1045
PspPI GGNCC 1 cut(s) 740
PspXI VCTCGAGB 1 cut(s) 132
PsuI RGATCY 1 cut(s) 537
RsaI GTAC 5 cut(s) 171, 1077, 1176, 1608, 1640
RsaNI GTAC 5 cut(s) 170, 1076, 1175, 1607, 1639
RseI CAYNNNNRTG 3 cut(s) 575, 1365, 1392
SatI GCNGC 4 cut(s) 807, 952, 1163, 1338
Sau3AI GATC 8 cut(s) 537, 633, 655, 661, 779, 1486, 1660, 1711
Sau96I GGNCC 1 cut(s) 740
ScaI AGTACT 1 cut(s) 1077
SchI GAGTC 1 cut(s) 709
ScrFI CCNGG 3 cut(s) 1048, 1130, 1391
SduI GDGCHC 4 cut(s) 139, 408, 457, 925
SfaNI GCATC 1 cut(s) 1838
SfcI CTRYAG 1 cut(s) 415
Sfr274I CTCGAG 1 cut(s) 132
SinI GGWCC 1 cut(s) 740
SlaI CTCGAG 1 cut(s) 132
SmiI ATTTAAAT 1 cut(s) 1431
SmiMI CAYNNNNRTG 3 cut(s) 575, 1365, 1392
SmlI CTYRAG 3 cut(s) 132, 1001, 1500
SmoI CTYRAG 3 cut(s) 132, 1001, 1500
SphI GCATGC 1 cut(s) 1370
SseBI AGGCCT 2 cut(s) 791, 1753
SspMI CTAG 7 cut(s) 476, 533, 638, 1418, 1566, 1746, 1755
StuI AGGCCT 2 cut(s) 791, 1753
StyD4I CCNGG 3 cut(s) 1046, 1128, 1389
StyI CCWWGG 1 cut(s) 1330
SwaI ATTTAAAT 1 cut(s) 1431
TaaI ACNGT 3 cut(s) 166, 401, 469
TaiI ACGT 2 cut(s) 727, 1527
TaqI TCGA 3 cut(s) 133, 609, 1710
TatI WGTACW 2 cut(s) 1075, 1638
TfiI GAWTC 6 cut(s) 4, 284, 371, 581, 1121, 1186
TscAI CASTG 1 cut(s) 171
TseFI GTSAC 1 cut(s) 1492
TseI GCWGC 4 cut(s) 806, 951, 1162, 1337
Tsp45I GTSAC 1 cut(s) 1492
TspDTI ATGAA 4 cut(s) 17, 354, 1239, 1349
TspGWI ACGGA 1 cut(s) 928
TspRI CASTG 1 cut(s) 171
Vha464I CTTAAG 1 cut(s) 1001
VneI GTGCAC 1 cut(s) 453
VpaK11BI GGWCC 1 cut(s) 740
VspI ATTAAT 1 cut(s) 95
XapI RAATTY 2 cut(s) 1653, 1822
XceI RCATGY 1 cut(s) 1370
XhoI CTCGAG 1 cut(s) 132
XmiI GTMKAC 1 cut(s) 1239
XmnI GAANNNNTTC 1 cut(s) 430
XspI CTAG 7 cut(s) 476, 533, 638, 1418, 1566, 1746, 1755
ZrmI AGTACT 1 cut(s) 1077
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.