FvH4_3g23881

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000487
Physical Location & Seq
Reverse (-)
16976562 .. 16983495
6934 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g23881.t1

Sequence Viewer

Length: 2724 bp
ATGCAGATTCTAATGGATGAGTGGAATATAAAACCTCCTAGTTGGGTGAGCGCCGATCCTTGTGATGGCTGGGAAGGTATAAAGTGCACCAATTCACGCATCACCGCCTTAGTGTTGGCAAACATGGGTTTGAAAGGCCAGCTATCCACTGATATCGAGTTGTTATCTGAGCTACGAATTCTGAATTTGTCTTTCAACAAGGGTCTGAGTGGACAACTTCGAGCTTCAATTGGAAAATTGAAAAAACTAGTACACTTAAACCTGGTTGGTTGCAGTTTCTTCGGTCCTATTCCAGATGCTATAGGATCTCTGACGAAGCTGTCTTATCTATCTCTGAAAAACAATAGTTTCAGTGGACCGATTCCACCTTCCATTGGTAATCTGTCCAACCTGACCTTTATAGACCTATCTGACAACAAGCTGCAGGGATCCATCCCAGTCTCTAATGGGACTACACCTGGTCTTGATATGTTACTTAAGGCGAAGCACTTTCATTTTGGGAACAATCAGCTCTCTGGCCCAATTCCACCTCGACTTTTCAGCTCAAACATGGCCATGATACATTTAATTTTTGACAGAAACAATCTAAATGGTAGCATTCCTTCCACAGTTGGACTTGTTCAGAAATTGGTGGCAGTACGCCTGGACGGCAATTCATTGAGTGGGCCTGTGCCTTCGAGCCTCAACAACCTTACAAATGTGTCTGAACTGCACTTGTCCAATAATATGCTGACTGGTCCTATGCCCAACCTTACTGGCATGATACATCTCAACTATGTGGATTTGAGCAACAACACGTTCGCTGTGTCAAATGTTCCTGCCTGGTTTTCTACCTTGGAGCTTTTGACAACATTAATGATGGAAAACACGGGGCTTCAGGGAATAATTCCTCCAGCCCTCTTCAGCTTTGAGAATTTGGAGAAAGTGGTACTGAGGAACAACCTTCTCACTGGCTTATTGGATATTGCAAACTCTAGCAACCAGTTGCAACTAATTGATCTGGAGAGGAACTTCATTAATGAACTTGCACAAAACAAGGAAGGATCCAACTACACATTGATACTGGTCAACAATCCAATTTGTGAGGAGAGTCAGACTAATAATTACTGCATTGTTTCTCCATCAAATGTACCCAACTCAATGTCACCAACTCCAAGTAACTGTACACCTGTTGCTTGTACTTCAGGCCAGGTTTCTTCCCCTAACTGTAGATGTGCATATCCCTACAGAGGAACACTAGTCTTCATATTTGTTTCTTTCTCAAATTTGGGAAACTATAGTTATTATAGATCTCTTGAGGAAGCTATCTTGAAAAGTTGCCAGTCCTTTAACCTCCCGGTGGATTCAGTTTCTCTGGGTCGTCCTTCCTGGGGTTCATCTTTTCATCTTGAGCTAGTCATAGAAATCTTCCCATCTGGTGATCAAGTGAGTTTCAACCAAACAGGAGTTTCAGAAATTTCTTCTGTTTTAAGCAACCAGACTCTCGACGGGCGTCCAAGTTTTTTTGGACCCTACTCGATGTTTTTTCCTTCAGGCAGTTCTGGAGGATCAAACAAGGGATTGATAATTGGTGCTTCCATTGGTGGATCTGTGCTTTTGTTATTAATAGTCCTTGTGGGGTGTTATGCTCTGTACCAAAAGAGGAGAGGAGACTCGCCATCGCGTAGATCAATCCTCATGACGGGGGTTTCAACTGTCGGTGCTCCAGAGCTGAAAGGAGCAAGGTTGTTCTCTTTCGAAGAGCTGAAGAAATACACAGACAATTTTTCCGAAGCAAATGATATTGGATCTGGCGGTTATGGCCAGGTGTATCGGGCAACTCTTCCTACCGGCCAAATTGTTGCCATTAAAAGAGCTAGACGGGAAGCTATGCAAGGTGCACCTGAGTTCAAAGCCGAGGTTGAGCTTCTATCAAGAGTACACCATAAGAATCTTGTCAGCCTAGTTGGTTTTTGTTTGGAGCAAGGTGAACAAATGTTGGTATATGAGTATGTTCCAAATGGTGATCTGCTGGATAGTCTTTCAGGAAAGTCAGGAATCAAGTTAGACTGGATGAGGAGACTGAAAGTTGCTCTTGGTGCAGCAAAAGGTCTGGCATATCTTCATGAATATGCGAACCCTGTCATTATTCACCGTGACATCAAGTCAAACAACATCCTACTTGATAATGATCTGGAAGCAAAAGTTGCTGACTTTGGTCTCTGCAAGTCTATGGCTGACAGTGAAAAGGATTATATTACTACTCAAGTTAAAGGGACAATGGGCTACTTGGATCCTGAGTATTACATGACTCAACAGTTGACTGAGAAGAGTGATGTATATAGTTTTGGTGTGGTACTGTTGGAGCTGATAACTGCTAGAAGGCCAATTGAACGAGGGAAGTACATAGTGAGAGTGGTACAGTCGGCAATAGATAAGTCTAAAGATTCGTATAATCTTCGTGAAGTACTTGATCCAAACATTGATTTAGGAAATGATCAGCTGAAAGGTTTAGAAATGTTTGTCGATTTGGCAATGTTGTGTGTAGACGAATTACGCGCTAAGAGGCCTAGAATGGGGGCAGTGGTGAAAGAGATAGAGAATATAATACAGATTTCTGCTGCTAAGTGGAATGCCGGTGCCAATTCAGCAGCTACTTCAGCTAGTTATGAGAGTGGAGAAGTTTCCAAGGATCTTTACAGTGTAGTCTTTGATTATAGTATGGTTCTTGAAGGACGAAGATAG

Protein Analysis

908

Amino Acids

99.16

Weight (kDa)

6.09

Isoelectric Point (pI)

36.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 50 - 135 1.3e-06 Leucine-rich repeat region
Pkinase PF00069 590 - 795 4.4e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 593 - 804 1.5e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 319
AccB1I GGYRCC 1 cut(s) 2618
AccI GTMKAC 1 cut(s) 2526
AccII CGCG 2 cut(s) 1663, 2538
AciI CCGC 2 cut(s) 105, 1794
AcoI YGGCCR 3 cut(s) 552, 1801, 1831
AcsI RAATTY 5 cut(s) 177, 184, 913, 1264, 1455
AcuI CTGAAG 6 cut(s) 860, 886, 1167, 1515, 1766, 2622
AcyI GRCGYC 1 cut(s) 1492
AfiI CCNNNNNNNGG 7 cut(s) 65, 374, 1229, 1339, 1370, 1681, 2555
AflII CTTAAG 1 cut(s) 476
AflIII ACRYGT 1 cut(s) 795
AhdI GACNNNNNGTC 1 cut(s) 2143
AhlI ACTAGT 2 cut(s) 247, 1237
AjnI CCWGG 7 cut(s) 261, 457, 642, 821, 1188, 1367, 1803
Alw21I GWGCWC 3 cut(s) 89, 1705, 1882
Alw26I GTCTC 4 cut(s) 445, 1644, 2053, 2204
Alw44I GTGCAC 2 cut(s) 85, 1878
AoxI GGCC 9 cut(s) 136, 517, 552, 665, 1186, 1801, 1831, 2363, 2546
ApaLI GTGCAC 2 cut(s) 85, 1878
ApeKI GCWGC 4 cut(s) 421, 2081, 2600, 2630
ApoI RAATTY 5 cut(s) 177, 184, 913, 1264, 1455
AseI ATTAAT 3 cut(s) 854, 1017, 1604
AspLEI GCGC 2 cut(s) 53, 2540
AspS9I GGNCC 6 cut(s) 284, 356, 518, 665, 737, 1508
AsuC2I CCSGG 1 cut(s) 1337
AsuHPI GGTGA 8 cut(s) 58, 94, 1137, 1430, 1979, 2015, 2123, 2578
AsuII TTCGAA 1 cut(s) 1737
AvaII GGWCC 4 cut(s) 284, 356, 737, 1508
BaeGI GKGCMC 2 cut(s) 89, 1882
BalI TGGCCA 2 cut(s) 554, 1803
BamHI GGATCC 3 cut(s) 428, 1043, 2272
BanI GGYRCC 1 cut(s) 2618
BarI GAAGNNNNNNTAC 2 cut(s) 586, 618
BbsI GAAGAC 1 cut(s) 1234
Bbv12I GWGCWC 3 cut(s) 89, 1705, 1882
BbvI GCAGC 4 cut(s) 408, 2093, 2587, 2642
BccI CCATC 6 cut(s) 59, 440, 853, 1129, 1420, 1666
BceAI ACGGC 1 cut(s) 664
BcgI CGANNNNNNTGC 2 cut(s) 262, 296
BciT130I CCWGG 7 cut(s) 263, 459, 644, 823, 1190, 1369, 1805
BclI TGATCA 2 cut(s) 1420, 2476
BcnI CCSGG 1 cut(s) 1337
BcoDI GTCTC 4 cut(s) 445, 1644, 2053, 2204
BcuI ACTAGT 2 cut(s) 247, 1237
BfmI CTRYAG 5 cut(s) 300, 422, 1207, 1225, 1276
BfoI RGCGCY 1 cut(s) 54
BfrI CTTAAG 1 cut(s) 476
BglI GCCNNNNNGGC 1 cut(s) 648
BglII AGATCT 1 cut(s) 1289
BisI GCNGC 4 cut(s) 422, 2082, 2601, 2631
BlsI GCNGC 4 cut(s) 423, 2083, 2602, 2632
BmcAI AGTACT 1 cut(s) 2448
Bme1390I CCNGG 8 cut(s) 263, 459, 644, 823, 1190, 1337, 1369, 1805
Bme18I GGWCC 4 cut(s) 284, 356, 737, 1508
BmeRI GACNNNNNGTC 1 cut(s) 2143
BmgT120I GGNCC 6 cut(s) 284, 356, 518, 665, 737, 1508
BmiI GGNNCC 5 cut(s) 430, 1045, 1510, 2274, 2620
BmrFI CCNGG 8 cut(s) 263, 459, 644, 823, 1190, 1337, 1369, 1805
BmrI ACTGGG 1 cut(s) 431
BmsI GCATC 2 cut(s) 108, 286
BmuI ACTGGG 1 cut(s) 431
BoxI GACNNNNGTC 2 cut(s) 1491, 2196
BpiI GAAGAC 1 cut(s) 1234
BpmI CTGGAG 4 cut(s) 876, 1022, 1563, 1689
Bpu14I TTCGAA 1 cut(s) 1737
BpuEI CTTGAG 3 cut(s) 1316, 1409, 2229
BpuMI CCSGG 1 cut(s) 1337
BsaBI GATNNNNATC 1 cut(s) 2169
BsaHI GRCGYC 1 cut(s) 1492
BsaI GGTCTC 1 cut(s) 2204
BsaJI CCNNGG 4 cut(s) 834, 1368, 1896, 2667
Bsc4I CCNNNNNNNGG 7 cut(s) 65, 374, 1229, 1339, 1370, 1681, 2555
Bse118I RCCGGY 2 cut(s) 1829, 2615
Bse1I ACTGG 8 cut(s) 437, 739, 760, 955, 982, 1068, 1321, 2054
Bse3DI GCAATG 1 cut(s) 2520
Bse8I GATNNNNATC 1 cut(s) 2169
BseBI CCWGG 7 cut(s) 263, 459, 644, 823, 1190, 1369, 1805
BseDI CCNNGG 4 cut(s) 834, 1368, 1896, 2667
BseGI GGATG 4 cut(s) 22, 432, 2058, 2154
BseJI GATNNNNATC 1 cut(s) 2169
BseLI CCNNNNNNNGG 7 cut(s) 65, 374, 1229, 1339, 1370, 1681, 2555
BseMI GCAATG 1 cut(s) 2520
BseMII CTCAG 6 cut(s) 159, 197, 923, 1875, 2268, 2295
BseNI ACTGG 8 cut(s) 437, 739, 760, 955, 982, 1068, 1321, 2054
BseRI GAGGAG 4 cut(s) 1100, 1657, 1662, 2071
BseSI GKGCMC 2 cut(s) 89, 1882
BseXI GCAGC 4 cut(s) 408, 2093, 2587, 2642
BseYI CCCAGC 1 cut(s) 69
BsgI GTGCAG 2 cut(s) 695, 2100
Bsh1236I CGCG 2 cut(s) 1663, 2538
BshFI GGCC 9 cut(s) 138, 519, 554, 667, 1188, 1803, 1833, 2365, 2548
BshNI GGYRCC 1 cut(s) 2618
BsiHKAI GWGCWC 3 cut(s) 89, 1705, 1882
BsiSI CCGG 3 cut(s) 1337, 1830, 2616
BslFI GGGAC 2 cut(s) 463, 2269
BslI CCNNNNNNNGG 7 cut(s) 65, 374, 1229, 1339, 1370, 1681, 2555
BsmAI GTCTC 4 cut(s) 445, 1644, 2053, 2204
BsmFI GGGAC 2 cut(s) 463, 2269
BsmI GAATGC 2 cut(s) 597, 2617
BsnI GGCC 9 cut(s) 138, 519, 554, 667, 1188, 1803, 1833, 2365, 2548
Bso31I GGTCTC 1 cut(s) 2204
Bsp119I TTCGAA 1 cut(s) 1737
Bsp1286I GDGCHC 3 cut(s) 89, 1705, 1882
Bsp1407I TGTACA 1 cut(s) 1163
BspACI CCGC 2 cut(s) 105, 1794
BspANI GGCC 9 cut(s) 138, 519, 554, 667, 1188, 1803, 1833, 2365, 2548
BspCNI CTCAG 6 cut(s) 160, 198, 924, 1876, 2269, 2296
BspFNI CGCG 2 cut(s) 1663, 2538
BspHI TCATGA 2 cut(s) 1677, 2104
BspLI GGNNCC 5 cut(s) 430, 1045, 1510, 2274, 2620
BspMAI CTGCAG 1 cut(s) 426
BspQI GCTCTTC 1 cut(s) 1734
BspT104I TTCGAA 1 cut(s) 1737
BspT107I GGYRCC 1 cut(s) 2618
BspTI CTTAAG 1 cut(s) 476
BspTNI GGTCTC 1 cut(s) 2204
BsrDI GCAATG 1 cut(s) 2520
BsrFI RCCGGY 2 cut(s) 1829, 2615
BsrGI TGTACA 1 cut(s) 1163
BsrI ACTGG 8 cut(s) 437, 739, 760, 955, 982, 1068, 1321, 2054
BssAI RCCGGY 2 cut(s) 1829, 2615
BssECI CCNNGG 4 cut(s) 834, 1368, 1896, 2667
BssNI GRCGYC 1 cut(s) 1492
BssT1I CCWWGG 2 cut(s) 834, 2667
Bst2UI CCWGG 7 cut(s) 263, 459, 644, 823, 1190, 1369, 1805
Bst6I CTCTTC 4 cut(s) 905, 1734, 1827, 2303
BstACI GRCGYC 1 cut(s) 1492
BstAFI CTTAAG 1 cut(s) 476
BstAPI GCANNNNNTGC 1 cut(s) 2186
BstAUI TGTACA 1 cut(s) 1163
BstBI TTCGAA 1 cut(s) 1737
BstC8I GCNNGC 1 cut(s) 140
BstDEI CTNAG 9 cut(s) 109, 168, 206, 932, 1884, 2277, 2304, 2541, 2604
BstF5I GGATG 4 cut(s) 22, 432, 2058, 2154
BstFNI CGCG 2 cut(s) 1663, 2538
BstH2I RGCGCY 1 cut(s) 54
BstHHI GCGC 2 cut(s) 53, 2540
BstMAI GTCTC 4 cut(s) 445, 1644, 2053, 2204
BstMWI GCNNNNNNNGC 6 cut(s) 648, 1800, 2078, 2186, 2627, 2639
BstNI CCWGG 7 cut(s) 263, 459, 644, 823, 1190, 1369, 1805
BstPAI GACNNNNGTC 2 cut(s) 1491, 2196
BstSCI CCNGG 8 cut(s) 261, 457, 642, 821, 1188, 1335, 1367, 1803
BstSFI CTRYAG 5 cut(s) 300, 422, 1207, 1225, 1276
BstSLI GKGCMC 2 cut(s) 89, 1882
BstUI CGCG 2 cut(s) 1663, 2538
BstV1I GCAGC 4 cut(s) 408, 2093, 2587, 2642
BstV2I GAAGAC 1 cut(s) 1234
BstX2I RGATCY 8 cut(s) 305, 428, 1043, 1289, 1586, 1787, 2272, 2671
BstYI RGATCY 8 cut(s) 305, 428, 1043, 1289, 1586, 1787, 2272, 2671
BsuRI GGCC 9 cut(s) 138, 519, 554, 667, 1188, 1803, 1833, 2365, 2548
BtgZI GCGATG 1 cut(s) 1644
BtsCI GGATG 4 cut(s) 22, 432, 2058, 2154
BtsI GCAGTG 1 cut(s) 2568
BtsIMutI CAGTG 6 cut(s) 147, 358, 948, 2227, 2568, 2686
Cac8I GCNNGC 1 cut(s) 140
CciI TCATGA 2 cut(s) 1677, 2104
CfoI GCGC 2 cut(s) 53, 2540
Cfr10I RCCGGY 2 cut(s) 1829, 2615
Cfr13I GGNCC 6 cut(s) 284, 356, 518, 665, 737, 1508
CseI GACGC 1 cut(s) 1481
CsiI ACCWGGT 2 cut(s) 261, 457
CviAII CATG 7 cut(s) 124, 550, 556, 760, 1678, 2105, 2287
DdeI CTNAG 9 cut(s) 109, 168, 206, 932, 1884, 2277, 2304, 2541, 2604
DrdI GACNNNNNNGTC 1 cut(s) 319
DriI GACNNNNNGTC 1 cut(s) 2143
DseDI GACNNNNNNGTC 1 cut(s) 319
EaeI YGGCCR 3 cut(s) 552, 1801, 1831
Eam1104I CTCTTC 4 cut(s) 905, 1734, 1827, 2303
Eam1105I GACNNNNNGTC 1 cut(s) 2143
EarI CTCTTC 4 cut(s) 905, 1734, 1827, 2303
Eco130I CCWWGG 2 cut(s) 834, 2667
Eco147I AGGCCT 1 cut(s) 2548
Eco31I GGTCTC 1 cut(s) 2204
Eco32I GATATC 1 cut(s) 154
Eco47I GGWCC 4 cut(s) 284, 356, 737, 1508
Eco57I CTGAAG 6 cut(s) 860, 886, 1167, 1515, 1766, 2622
EcoRI GAATTC 1 cut(s) 177
EcoRII CCWGG 7 cut(s) 261, 457, 642, 821, 1188, 1367, 1803
EcoRV GATATC 1 cut(s) 154
EcoT14I CCWWGG 2 cut(s) 834, 2667
ErhI CCWWGG 2 cut(s) 834, 2667
FaeI CATG 7 cut(s) 127, 553, 559, 763, 1681, 2108, 2290
FalI AAGNNNNNCTT 2 cut(s) 2058, 2090
FaqI GGGAC 2 cut(s) 463, 2269
FatI CATG 7 cut(s) 123, 549, 555, 759, 1677, 2104, 2286
FbaI TGATCA 2 cut(s) 1420, 2476
FblI GTMKAC 1 cut(s) 2526
Fnu4HI GCNGC 4 cut(s) 422, 2082, 2601, 2631
FokI GGATG 4 cut(s) 29, 419, 2065, 2141
Fsp4HI GCNGC 4 cut(s) 422, 2082, 2601, 2631
GlaI GCGC 2 cut(s) 52, 2539
GluI GCNGC 4 cut(s) 422, 2082, 2601, 2631
GsaI CCCAGC 1 cut(s) 73
GsuI CTGGAG 4 cut(s) 876, 1022, 1563, 1689
HaeII RGCGCY 1 cut(s) 54
HaeIII GGCC 9 cut(s) 138, 519, 554, 667, 1188, 1803, 1833, 2365, 2548
HapII CCGG 3 cut(s) 1337, 1830, 2616
HgaI GACGC 1 cut(s) 1481
HhaI GCGC 2 cut(s) 53, 2540
Hin1I GRCGYC 1 cut(s) 1492
Hin1II CATG 7 cut(s) 127, 553, 559, 763, 1681, 2108, 2290
Hin6I GCGC 2 cut(s) 51, 2538
HinP1I GCGC 2 cut(s) 51, 2538
HincII GTYRAC 2 cut(s) 1069, 2301
HindII GTYRAC 2 cut(s) 1069, 2301
HpaII CCGG 3 cut(s) 1337, 1830, 2616
HphI GGTGA 8 cut(s) 58, 94, 1137, 1430, 1979, 2015, 2123, 2578
Hpy99I CGWCG 1 cut(s) 1490
HpyCH4IV ACGT 1 cut(s) 797
HpyF10VI GCNNNNNNNGC 6 cut(s) 648, 1800, 2078, 2186, 2627, 2639
HpyF3I CTNAG 9 cut(s) 109, 168, 206, 932, 1884, 2277, 2304, 2541, 2604
HpySE526I ACGT 1 cut(s) 797
Hsp92I GRCGYC 1 cut(s) 1492
Hsp92II CATG 7 cut(s) 127, 553, 559, 763, 1681, 2108, 2290
HspAI GCGC 2 cut(s) 51, 2538
Ksp22I TGATCA 2 cut(s) 1420, 2476
LguI GCTCTTC 1 cut(s) 1734
LmnI GCTCC 5 cut(s) 838, 1708, 1718, 1960, 2344
Lsp1109I GCAGC 4 cut(s) 408, 2093, 2587, 2642
LweI GCATC 2 cut(s) 108, 286
MabI ACCWGGT 2 cut(s) 261, 457
MaeII ACGT 1 cut(s) 797
MaeIII GTNAC 4 cut(s) 471, 1143, 1157, 2135
MfeI CAATTG 2 cut(s) 228, 2367
MflI RGATCY 8 cut(s) 305, 428, 1043, 1289, 1586, 1787, 2272, 2671
MhlI GDGCHC 3 cut(s) 89, 1705, 1882
MlsI TGGCCA 2 cut(s) 554, 1803
MluNI TGGCCA 2 cut(s) 554, 1803
MlyI GAGTC 4 cut(s) 1099, 1474, 1646, 2284
MmeI TCCRAC 4 cut(s) 411, 592, 1071, 2322
Mox20I TGGCCA 2 cut(s) 554, 1803
MscI TGGCCA 2 cut(s) 554, 1803
MslI CAYNNNNRTG 2 cut(s) 554, 2109
Msp20I TGGCCA 2 cut(s) 554, 1803
MspA1I CMGCKG 1 cut(s) 2482
MspCI CTTAAG 1 cut(s) 476
MspI CCGG 3 cut(s) 1337, 1830, 2616
MspR9I CCNGG 8 cut(s) 263, 459, 644, 823, 1190, 1337, 1369, 1805
MunI CAATTG 2 cut(s) 228, 2367
Mva1269I GAATGC 2 cut(s) 597, 2617
MvaI CCWGG 7 cut(s) 263, 459, 644, 823, 1190, 1369, 1805
MvnI CGCG 2 cut(s) 1663, 2538
MwoI GCNNNNNNNGC 6 cut(s) 648, 1800, 2078, 2186, 2627, 2639
NciI CCSGG 1 cut(s) 1337
NlaIII CATG 7 cut(s) 127, 553, 559, 763, 1681, 2108, 2290
NlaIV GGNNCC 5 cut(s) 430, 1045, 1510, 2274, 2620
NmeAIII GCCGAG 1 cut(s) 1921
NmuCI GTSAC 2 cut(s) 1143, 2135
NspV TTCGAA 1 cut(s) 1737
PagI TCATGA 2 cut(s) 1677, 2104
PceI AGGCCT 1 cut(s) 2548
PciSI GCTCTTC 1 cut(s) 1734
PctI GAATGC 2 cut(s) 597, 2617
PfeI GAWTC 6 cut(s) 7, 361, 1343, 1930, 2037, 2426
PkrI GCNGC 4 cut(s) 423, 2083, 2602, 2632
PleI GAGTC 4 cut(s) 1098, 1474, 1646, 2284
PpsI GAGTC 4 cut(s) 1098, 1474, 1646, 2284
PshAI GACNNNNGTC 2 cut(s) 1491, 2196
PshBI ATTAAT 3 cut(s) 854, 1017, 1604
Psp6I CCWGG 7 cut(s) 261, 457, 642, 821, 1188, 1367, 1803
PspFI CCCAGC 1 cut(s) 69
PspGI CCWGG 7 cut(s) 261, 457, 642, 821, 1188, 1367, 1803
PspN4I GGNNCC 5 cut(s) 430, 1045, 1510, 2274, 2620
PspPI GGNCC 6 cut(s) 284, 356, 518, 665, 737, 1508
PstI CTGCAG 1 cut(s) 426
PsuI RGATCY 8 cut(s) 305, 428, 1043, 1289, 1586, 1787, 2272, 2671
PvuII CAGCTG 1 cut(s) 2482
RseI CAYNNNNRTG 2 cut(s) 554, 2109
SapI GCTCTTC 1 cut(s) 1734
SatI GCNGC 4 cut(s) 422, 2082, 2601, 2631
Sau96I GGNCC 6 cut(s) 284, 356, 518, 665, 737, 1508
ScaI AGTACT 1 cut(s) 2448
SchI GAGTC 4 cut(s) 1099, 1474, 1646, 2284
ScrFI CCNGG 8 cut(s) 263, 459, 644, 823, 1190, 1337, 1369, 1805
SduI GDGCHC 3 cut(s) 89, 1705, 1882
SexAI ACCWGGT 2 cut(s) 261, 457
SfaNI GCATC 2 cut(s) 108, 286
SfcI CTRYAG 5 cut(s) 300, 422, 1207, 1225, 1276
SfuI TTCGAA 1 cut(s) 1737
SinI GGWCC 4 cut(s) 284, 356, 737, 1508
SmiMI CAYNNNNRTG 2 cut(s) 554, 2109
SmlI CTYRAG 4 cut(s) 476, 1295, 1388, 2244
SmoI CTYRAG 4 cut(s) 476, 1295, 1388, 2244
SpeI ACTAGT 2 cut(s) 247, 1237
SseBI AGGCCT 1 cut(s) 2548
SsiI CCGC 2 cut(s) 105, 1794
StuI AGGCCT 1 cut(s) 2548
StyD4I CCNGG 8 cut(s) 261, 457, 642, 821, 1188, 1335, 1367, 1803
StyI CCWWGG 2 cut(s) 834, 2667
TaiI ACGT 1 cut(s) 800
TaqI TCGA 8 cut(s) 156, 220, 532, 677, 1485, 1517, 1737, 2505
TaqII GACCGA 2 cut(s) 272, 373
TatI WGTACW 6 cut(s) 250, 1163, 1178, 1918, 2382, 2446
TfiI GAWTC 6 cut(s) 7, 361, 1343, 1930, 2037, 2426
TscAI CASTG 6 cut(s) 154, 358, 955, 2227, 2568, 2686
TseFI GTSAC 2 cut(s) 1143, 2135
TseI GCWGC 4 cut(s) 421, 2081, 2600, 2630
Tsp45I GTSAC 2 cut(s) 1143, 2135
TspDTI ATGAA 9 cut(s) 482, 645, 1003, 1035, 1234, 1365, 1373, 2093, 2121
TspRI CASTG 6 cut(s) 154, 358, 955, 2227, 2568, 2686
Vha464I CTTAAG 1 cut(s) 476
VneI GTGCAC 2 cut(s) 85, 1878
VpaK11BI GGWCC 4 cut(s) 284, 356, 737, 1508
VspI ATTAAT 3 cut(s) 854, 1017, 1604
XapI RAATTY 5 cut(s) 177, 184, 913, 1264, 1455
XmiI GTMKAC 1 cut(s) 2526
ZrmI AGTACT 1 cut(s) 2448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.