Rh7BG308900

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000487
Physical Location & Seq
Forward (+)
29757811 .. 29764391
6581 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG308900.1

Sequence Viewer

Length: 2865 bp
ATGGATCATAGAACTCCGGTGTTTCTGCTTCTTATATTCACGCCTTTTCTCGTTTTAGCAAACCATGAGACAAGTTCTCTGGATGTTACTGGTTTAAAGTCTCTAATGACACTATGGACAAATACACCTCCAAATTGGGGGATTCGGGATCCTTGTGAAGATGGTTGGGATGGCATTGAGTGTATGAACATGCGTGTGGTCTCTTTAAAATTAGCAAGTATGAATTTGACTGGCACACTCTCTGGAGATATTGGACAGTTATCTGAACTACAAATTTTGGATCTATCTTACAACAAAGGCCTGACAGGACCACTCCCAGAAGAAATTGGCAGTTTGAAGAAGCTATCTAACATAATTCTGGTTGGTTGCAGCTTCTCTGGTCCCATACCTCCTACTATAGGGTCCCTACAGGAGCTAATATTTCTGTCTCTGAATTCTAACAGATTTAGTGGGATGATCCCATCTTCCATTGGTAATCTGTCTAAACTATATTGGCTGGATCTAGCTGACAACTACCTTCAAGGACCCATCCCAGTTTCTGTTGGTGGTGAACCTGGTCTTGACATGCTCAGTCATTGCAAGCACTTTCATCTTGGAATGAATAAGCTCTCAGGCCCAATTCCATCAAAGCTTTTTAGCTCAAACATGAGCCTGATACATGTGCTCTTCGAAAGTAATAAACTATATGGCAGCATCCCTTCCAGCCTTGGACTTGTAACGTCTTTGGAGGTTGTGCGATTTGATGGAAACATGTTAACTGGGCCTATTCCTCCGAGCCTCAACAGTCTTGCACATGTTTCTCAGCTGTTCTTGTCTAATAACAAGCTGAGCGGCCCTGCTCCCAACCTTACTGGCATGAACCTTCTCCATTATGTGGATTTGAGCAATAATAGTTTCGTCGTGTCTGATGTTCCACCATGGTTTTCAACACTAGAGTCTTTGACCACATTAATAATGGAGGACACAAAACTTCAAGGAGAAATACCTGCTGCTCTATTCAGCCTTTCAAACTTACAGACTGTGGTCCTGAGGAACAACCAGCTCAATGGCACCTTGGATATTGGCGCTACCTATAGCAGTCAATTGCAACTCATTGATTTACAAAAAAATTTCATTACGGAATATGAAGGAAATGGAGGATACAATGGTACTTTAATACTAGTTCAAAATCCAGTTTGTGACGGAACTGGAGCGTCACTGAGTTACTGCAAGATTTCGCAATCATCTGATGTTGTCCCATATAAAACATTGCCAAATAACTGTGCCCCCAGTCCCTGCGGTTCCAATCAGGTTTCAAGCCCCAACTGTAAATGTGCATATCCATATGAGGGCACTCTAACCTTTAGAGCTCCTACCTTCTCAGACTTGGATGAAACTGGCTACAAAGTGCTTGAGAAGAATCTCACTGATTCTTTCTTGTCCCATAAACTTAGAGTCGATTCAGTCGCTTTGAGTAACCTCACCAAGGATTCACATGCATACCTTAGTATGAGCCTAGAAGTATTCCCACAAAGCCAAGATCGTTTCAATAGAAAGGAAGTTTCTAGTATTGCTTTTCTACTCAGTAACCAAACATTCAAGCCTCAAAAATCTTTTGGACCATTCTATTTCATTGGTGATGATTATCAACACTTTGCAGGAGAAAAGGAACCATCAGAATCAAACAAATCGTCTAATGTGGGCATTATTATTGGAGCAGCAGCTGGTGGTTCTGTTCTTGTGCTAATATTACTCCTTGTAGGAATTTATGCTATTCGCCAGAGGAGAAGGGCAAAAAGGGCCACTGATCAAAACAATCCTTTTGGCAAATGGGATGTGAGTAATAAGACCAGAGGTAGCACTCCCCAATTAAAGGGGGCTAGATCGTTCTCTTTTGAAGAGCTCATGAAATACAGCAACAACTTTTCAGAAGCAAATGATGTTGGATCTGGGGGCTATGGGAAGGTTTACCGTGGAACACTTCCCACAGGGCAACTGATTGCCATCAAACGAGCTCACAAAGAATCTATCCAAGGTGGAAATGAGTTCAAAACTGAGATTGAACTTCTTTCACTGGTTCATCATAAGCACCTTGTCAGCCTCGTAGGATTTTGTTTTGACCGAGGTGAGCAGATGCTGGTGTATGAGTATGTAGCAAATGGGACTCTTAAGGATAGTCTTACAGGTAAGTCAGGAATCAGATTAGATTGGCAGAGGAGACTTAAAATAGCACTTGGTGCAGCTAGAGGCTTAGCCTATCTTCATGAACTTTGCGACCCTCCAATTATACACAGAGATATAAAATCAACTAATGTTCTGTTGGACAACCGCTTGAATGCAAAAGTTGCTGATTTTGGTCTCTGCAAGTCCATGGGTAATAGTGGAAGGGATCATGTCTCCACTCAAGTTAAAGGAACAATGGGATACATGGATCCTGAATATTACATGACCCAGCGATTGACTGAGAAGAGTGATGTTTATGGTTTTGGAGTGCTAATGTTGGAGCTACTTACTGCAAGGAAACCGATAGAACAAGGAAAATATATCGTGCGAGAAGTAAGGATGGCAATGGATAAGACTAAGGATTTATACAACCTTCATGTAATCCTGGATTCAGCCATTGGTTTGGGAACGACACTCAAAGGTTTAGAGAGGTTTGTGGATCTTGCAATGACGTGTGTTGAAGAAGAAGGAGCCAACAGGCCTACTATGAGTGAGGTGCTAAAAGAGATTGAAAACATTATGCAGCTTGCTGGTCTGAACCCTAATGCTGAGTCGGCATCCACTTCCGCAAGCTATGAGGATGCAAGCTCTAAGCATCCTTACAGCAATGAGGCCTTTGATTATAGTGGAGTATTTCCAGCTTCAAAGATAGAGCCGCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 Pkinase Pkinase_Tyr

Protein Analysis

954

Amino Acids

104.63

Weight (kDa)

6.1

Isoelectric Point (pI)

35.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 64 - 168 8.5e-09 Leucine-rich repeat region
Pkinase PF00069 637 - 902 3.1e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 639 - 903 2.3e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 994
AccB1I GGYRCC 1 cut(s) 1049
AccB7I CCANNNNNTGG 1 cut(s) 874
AccBSI CCGCTC 1 cut(s) 831
AciI CCGC 5 cut(s) 831, 1278, 2308, 2769, 2858
AcsI RAATTY 5 cut(s) 223, 273, 433, 1108, 1743
AdeI CACNNNGTG 1 cut(s) 2216
AfaI GTAC 1 cut(s) 1150
AfiI CCNNNNNNNGG 6 cut(s) 137, 398, 874, 1328, 1465, 1852
AflII CTTAAG 1 cut(s) 2147
AflIII ACRYGT 4 cut(s) 658, 750, 793, 2654
AhlI ACTAGT 1 cut(s) 1159
AjiI CACGTC 1 cut(s) 2655
AjnI CCWGG 2 cut(s) 553, 2586
Alw21I GWGCWC 4 cut(s) 666, 1351, 1884, 1996
Alw26I GTCTC 7 cut(s) 62, 105, 205, 432, 2191, 2342, 2380
AlwNI CAGNNNCTG 4 cut(s) 539, 1275, 1703, 2116
AoxI GGCC 7 cut(s) 298, 613, 761, 832, 1779, 2681, 2814
ApeKI GCWGC 7 cut(s) 369, 690, 989, 1697, 1700, 2219, 2725
ApoI RAATTY 5 cut(s) 223, 273, 433, 1108, 1743
ArsI GACNNNNNNTTYG 2 cut(s) 1655, 1687
AseI ATTAAT 1 cut(s) 950
AspLEI GCGC 1 cut(s) 1067
AsuHPI GGTGA 4 cut(s) 560, 1453, 1628, 2117
AsuII TTCGAA 1 cut(s) 669
AvaII GGWCC 6 cut(s) 308, 380, 402, 524, 1024, 1598
AxyI CCTNAGG 1 cut(s) 1028
BaeGI GKGCMC 2 cut(s) 1267, 1334
BaeI ACNNNNGTAYC 2 cut(s) 1132, 1165
BamHI GGATCC 2 cut(s) 148, 2410
BanI GGYRCC 1 cut(s) 1049
BanII GRGCYC 3 cut(s) 1351, 1884, 1996
Bbv12I GWGCWC 4 cut(s) 666, 1351, 1884, 1996
BbvI GCAGC 7 cut(s) 381, 702, 976, 1709, 1712, 2231, 2737
BccI CCATC 9 cut(s) 155, 164, 469, 536, 631, 737, 1660, 1991, 2536
BciT130I CCWGG 2 cut(s) 555, 2588
BciVI GTATCC 2 cut(s) 1133, 2396
BclI TGATCA 1 cut(s) 1786
BcoDI GTCTC 7 cut(s) 62, 105, 205, 432, 2191, 2342, 2380
BcuI ACTAGT 1 cut(s) 1159
BfaI CTAG 7 cut(s) 503, 932, 1160, 1496, 1545, 1860, 2223
BfmI CTRYAG 3 cut(s) 396, 407, 1072
BfoI RGCGCY 1 cut(s) 1068
BfrI CTTAAG 1 cut(s) 2147
BfuAI ACCTGC 1 cut(s) 994
BfuI GTATCC 2 cut(s) 1133, 2396
BisI GCNGC 9 cut(s) 370, 691, 832, 990, 1698, 1701, 2220, 2726, 2858
BlpI GCTNAGC 2 cut(s) 827, 2230
BlsI GCNGC 9 cut(s) 371, 692, 833, 991, 1699, 1702, 2221, 2727, 2859
Bme1390I CCNGG 2 cut(s) 555, 2588
Bme18I GGWCC 6 cut(s) 308, 380, 402, 524, 1024, 1598
BmgBI CACGTC 1 cut(s) 2655
BmrFI CCNGG 2 cut(s) 555, 2588
BmrI ACTGGG 3 cut(s) 527, 768, 1263
BmsI GCATC 5 cut(s) 702, 2103, 2768, 2773, 2806
BmuI ACTGGG 3 cut(s) 527, 768, 1263
BoxI GACNNNNGTC 1 cut(s) 1022
BpmI CTGGAG 2 cut(s) 264, 1209
Bpu1102I GCTNAGC 2 cut(s) 827, 2230
Bpu14I TTCGAA 1 cut(s) 669
BpuEI CTTGAG 2 cut(s) 1412, 2367
BsaBI GATNNNNATC 2 cut(s) 1623, 1982
BsaI GGTCTC 2 cut(s) 205, 2342
BsaJI CCNNGG 8 cut(s) 706, 917, 1053, 1464, 1951, 2011, 2101, 2349
BsaWI WCCGGW 1 cut(s) 16
Bsc4I CCNNNNNNNGG 6 cut(s) 137, 398, 874, 1328, 1465, 1852
Bse21I CCTNAGG 1 cut(s) 1028
Bse3DI GCAATG 5 cut(s) 574, 1247, 2553, 2655, 2815
Bse8I GATNNNNATC 2 cut(s) 1623, 1982
BseBI CCWGG 2 cut(s) 555, 2588
BseDI CCNNGG 8 cut(s) 706, 917, 1053, 1464, 1951, 2011, 2101, 2349
BseJI GATNNNNATC 2 cut(s) 1623, 1982
BseLI CCNNNNNNNGG 6 cut(s) 137, 398, 874, 1328, 1465, 1852
BseMI GCAATG 5 cut(s) 574, 1247, 2553, 2655, 2815
BseRI GAGGAG 2 cut(s) 1777, 2209
BseSI GKGCMC 2 cut(s) 1267, 1334
BseXI GCAGC 7 cut(s) 381, 702, 976, 1709, 1712, 2231, 2737
BseYI CCCAGC 1 cut(s) 2430
BsgI GTGCAG 1 cut(s) 2238
BshFI GGCC 7 cut(s) 300, 615, 763, 834, 1781, 2683, 2816
BshNI GGYRCC 1 cut(s) 1049
BsiHKAI GWGCWC 4 cut(s) 666, 1351, 1884, 1996
BsiSI CCGG 1 cut(s) 17
BslFI GGGAC 6 cut(s) 366, 388, 1220, 1257, 1405, 2155
BslI CCNNNNNNNGG 6 cut(s) 137, 398, 874, 1328, 1465, 1852
BsmAI GTCTC 7 cut(s) 62, 105, 205, 432, 2191, 2342, 2380
BsmFI GGGAC 6 cut(s) 366, 388, 1220, 1257, 1405, 2155
BsmI GAATGC 1 cut(s) 2320
BsnI GGCC 7 cut(s) 300, 615, 763, 834, 1781, 2683, 2816
Bso31I GGTCTC 2 cut(s) 205, 2342
Bsp119I TTCGAA 1 cut(s) 669
Bsp1286I GDGCHC 6 cut(s) 666, 1267, 1334, 1351, 1884, 1996
Bsp1720I GCTNAGC 2 cut(s) 827, 2230
Bsp19I CCATGG 2 cut(s) 917, 2349
BspACI CCGC 5 cut(s) 831, 1278, 2308, 2769, 2858
BspANI GGCC 7 cut(s) 300, 615, 763, 834, 1781, 2683, 2816
BspHI TCATGA 2 cut(s) 1884, 2242
BspMI ACCTGC 1 cut(s) 994
BspQI GCTCTTC 2 cut(s) 671, 1872
BspT104I TTCGAA 1 cut(s) 669
BspT107I GGYRCC 1 cut(s) 1049
BspTI CTTAAG 1 cut(s) 2147
BspTNI GGTCTC 2 cut(s) 205, 2342
BsrBI CCGCTC 1 cut(s) 831
BsrDI GCAATG 5 cut(s) 574, 1247, 2553, 2655, 2815
BssECI CCNNGG 8 cut(s) 706, 917, 1053, 1464, 1951, 2011, 2101, 2349
BssT1I CCWWGG 6 cut(s) 706, 917, 1053, 1464, 2011, 2349
Bst2UI CCWGG 2 cut(s) 555, 2588
Bst4CI ACNGT 6 cut(s) 258, 785, 1021, 1262, 1307, 1952
Bst6I CTCTTC 3 cut(s) 671, 1872, 2441
BstAFI CTTAAG 1 cut(s) 2147
BstAPI GCANNNNNTGC 2 cut(s) 2216, 2324
BstBI TTCGAA 1 cut(s) 669
BstC8I GCNNGC 4 cut(s) 581, 2730, 2773, 2788
BstDSI CCRYGG 3 cut(s) 917, 1951, 2349
BstENI CCTNNNNNAGG 2 cut(s) 396, 1463
BstH2I RGCGCY 1 cut(s) 1068
BstHHI GCGC 1 cut(s) 1067
BstMAI GTCTC 7 cut(s) 62, 105, 205, 432, 2191, 2342, 2380
BstMWI GCNNNNNNNGC 4 cut(s) 1778, 2216, 2324, 2756
BstNI CCWGG 2 cut(s) 555, 2588
BstNSI RCATGY 6 cut(s) 193, 568, 662, 754, 797, 1478
BstPAI GACNNNNGTC 1 cut(s) 1022
BstSCI CCNGG 2 cut(s) 553, 2586
BstSFI CTRYAG 3 cut(s) 396, 407, 1072
BstSLI GKGCMC 2 cut(s) 1267, 1334
BstV1I GCAGC 7 cut(s) 381, 702, 976, 1709, 1712, 2231, 2737
BstX2I RGATCY 6 cut(s) 148, 280, 499, 1925, 2410, 2641
BstXI CCANNNNNNTGG 2 cut(s) 1046, 2605
BstYI RGATCY 6 cut(s) 148, 280, 499, 1925, 2410, 2641
Bsu36I CCTNAGG 1 cut(s) 1028
BsuI GTATCC 2 cut(s) 1133, 2396
BsuRI GGCC 7 cut(s) 300, 615, 763, 834, 1781, 2683, 2816
BtgI CCRYGG 3 cut(s) 917, 1951, 2349
BtrI CACGTC 1 cut(s) 2655
BtsIMutI CAGTG 4 cut(s) 1196, 1404, 1782, 2051
BveI ACCTGC 1 cut(s) 994
Cac8I GCNNGC 4 cut(s) 581, 2730, 2773, 2788
CaiI CAGNNNCTG 4 cut(s) 539, 1275, 1703, 2116
CciI TCATGA 2 cut(s) 1884, 2242
CfoI GCGC 1 cut(s) 1067
CseI GACGC 1 cut(s) 1182
CsiI ACCWGGT 1 cut(s) 553
Csp6I GTAC 1 cut(s) 1149
CviQI GTAC 1 cut(s) 1149
DraI TTTAAA 2 cut(s) 96, 207
DraIII CACNNNGTG 1 cut(s) 2216
Eam1104I CTCTTC 3 cut(s) 671, 1872, 2441
EarI CTCTTC 3 cut(s) 671, 1872, 2441
Ecl136II GAGCTC 3 cut(s) 1349, 1882, 1994
Eco130I CCWWGG 6 cut(s) 706, 917, 1053, 1464, 2011, 2349
Eco147I AGGCCT 3 cut(s) 300, 2683, 2816
Eco24I GRGCYC 3 cut(s) 1351, 1884, 1996
Eco31I GGTCTC 2 cut(s) 205, 2342
Eco47I GGWCC 6 cut(s) 308, 380, 402, 524, 1024, 1598
Eco53kI GAGCTC 3 cut(s) 1349, 1882, 1994
Eco81I CCTNAGG 1 cut(s) 1028
EcoICRI GAGCTC 3 cut(s) 1349, 1882, 1994
EcoNI CCTNNNNNAGG 2 cut(s) 396, 1463
EcoO109I RGGNCCY 2 cut(s) 402, 524
EcoRI GAATTC 1 cut(s) 433
EcoRII CCWGG 2 cut(s) 553, 2586
EcoT14I CCWWGG 6 cut(s) 706, 917, 1053, 1464, 2011, 2349
EcoT22I ATGCAT 1 cut(s) 1480
EcoT38I GRGCYC 3 cut(s) 1351, 1884, 1996
ErhI CCWWGG 6 cut(s) 706, 917, 1053, 1464, 2011, 2349
FaqI GGGAC 6 cut(s) 366, 388, 1220, 1257, 1405, 2155
FauNDI CATATG 1 cut(s) 1324
FbaI TGATCA 1 cut(s) 1786
Fnu4HI GCNGC 9 cut(s) 370, 691, 832, 990, 1698, 1701, 2220, 2726, 2858
FriOI GRGCYC 3 cut(s) 1351, 1884, 1996
Fsp4HI GCNGC 9 cut(s) 370, 691, 832, 990, 1698, 1701, 2220, 2726, 2858
FspBI CTAG 7 cut(s) 503, 932, 1160, 1496, 1545, 1860, 2223
GlaI GCGC 1 cut(s) 1066
GluI GCNGC 9 cut(s) 370, 691, 832, 990, 1698, 1701, 2220, 2726, 2858
GsaI CCCAGC 1 cut(s) 2434
GsuI CTGGAG 2 cut(s) 264, 1209
HaeII RGCGCY 1 cut(s) 1068
HaeIII GGCC 7 cut(s) 300, 615, 763, 834, 1781, 2683, 2816
HapII CCGG 1 cut(s) 17
HgaI GACGC 1 cut(s) 1182
HhaI GCGC 1 cut(s) 1067
Hin6I GCGC 1 cut(s) 1065
HinP1I GCGC 1 cut(s) 1065
HincII GTYRAC 1 cut(s) 756
HindII GTYRAC 1 cut(s) 756
HindIII AAGCTT 1 cut(s) 629
HpaI GTTAAC 1 cut(s) 756
HpaII CCGG 1 cut(s) 17
HphI GGTGA 4 cut(s) 560, 1453, 1628, 2117
Hpy166II GTNNAC 3 cut(s) 551, 756, 1948
Hpy188III TCNNGA 9 cut(s) 80, 146, 243, 560, 1027, 1885, 2172, 2243, 2414
Hpy8I GTNNAC 3 cut(s) 551, 756, 1948
Hpy99I CGWCG 1 cut(s) 902
HpyCH4III ACNGT 6 cut(s) 258, 785, 1021, 1262, 1307, 1952
HpyCH4IV ACGT 2 cut(s) 719, 2654
HpyF10VI GCNNNNNNNGC 4 cut(s) 1778, 2216, 2324, 2756
HpySE526I ACGT 2 cut(s) 719, 2654
HspAI GCGC 1 cut(s) 1065
KflI GGGWCCC 1 cut(s) 402
Ksp22I TGATCA 1 cut(s) 1786
KspAI GTTAAC 1 cut(s) 756
LguI GCTCTTC 2 cut(s) 671, 1872
LmnI GCTCC 7 cut(s) 412, 844, 1190, 1354, 1694, 2482, 2672
Lsp1109I GCAGC 7 cut(s) 381, 702, 976, 1709, 1712, 2231, 2737
LweI GCATC 5 cut(s) 702, 2103, 2768, 2773, 2806
MabI ACCWGGT 1 cut(s) 553
MaeI CTAG 7 cut(s) 503, 932, 1160, 1496, 1545, 1860, 2223
MaeII ACGT 2 cut(s) 719, 2654
MaeIII GTNAC 7 cut(s) 85, 715, 1178, 1194, 1202, 1454, 1565
MbiI CCGCTC 1 cut(s) 831
MfeI CAATTG 1 cut(s) 1082
MflI RGATCY 6 cut(s) 148, 280, 499, 1925, 2410, 2641
MhlI GDGCHC 6 cut(s) 666, 1267, 1334, 1351, 1884, 1996
MlyI GAGTC 4 cut(s) 944, 1443, 2137, 2762
MmeI TCCRAC 3 cut(s) 1903, 2280, 2460
Mph1103I ATGCAT 1 cut(s) 1480
MseI TTAA 9 cut(s) 95, 206, 755, 950, 1154, 1850, 2148, 2202, 2388
MslI CAYNNNNRTG 1 cut(s) 194
MspA1I CMGCKG 2 cut(s) 805, 1703
MspCI CTTAAG 1 cut(s) 2147
MspI CCGG 1 cut(s) 17
MspR9I CCNGG 2 cut(s) 555, 2588
MunI CAATTG 1 cut(s) 1082
Mva1269I GAATGC 1 cut(s) 2320
MvaI CCWGG 2 cut(s) 555, 2588
MwoI GCNNNNNNNGC 4 cut(s) 1778, 2216, 2324, 2756
NcoI CCATGG 2 cut(s) 917, 2349
NdeI CATATG 1 cut(s) 1324
NmuCI GTSAC 2 cut(s) 1178, 1194
NsiI ATGCAT 1 cut(s) 1480
NspI RCATGY 6 cut(s) 193, 568, 662, 754, 797, 1478
NspV TTCGAA 1 cut(s) 669
PagI TCATGA 2 cut(s) 1884, 2242
PceI AGGCCT 3 cut(s) 300, 2683, 2816
PciI ACATGT 3 cut(s) 658, 750, 793
PciSI GCTCTTC 2 cut(s) 671, 1872
PctI GAATGC 1 cut(s) 2320
PfeI GAWTC 9 cut(s) 142, 1399, 1409, 1439, 1469, 1658, 2003, 2175, 2591
PflMI CCANNNNNTGG 1 cut(s) 874
PfoI TCCNGGA 1 cut(s) 2586
PkrI GCNGC 9 cut(s) 371, 692, 833, 991, 1699, 1702, 2221, 2727, 2859
PleI GAGTC 4 cut(s) 943, 1442, 2137, 2761
PpsI GAGTC 4 cut(s) 943, 1442, 2137, 2761
PpuMI RGGWCCY 2 cut(s) 402, 524
PscI ACATGT 3 cut(s) 658, 750, 793
PshAI GACNNNNGTC 1 cut(s) 1022
PshBI ATTAAT 1 cut(s) 950
Psp124BI GAGCTC 3 cut(s) 1351, 1884, 1996
Psp5II RGGWCCY 2 cut(s) 402, 524
Psp6I CCWGG 2 cut(s) 553, 2586
PspFI CCCAGC 1 cut(s) 2430
PspGI CCWGG 2 cut(s) 553, 2586
PspPPI RGGWCCY 2 cut(s) 402, 524
PstNI CAGNNNCTG 4 cut(s) 539, 1275, 1703, 2116
PsuI RGATCY 6 cut(s) 148, 280, 499, 1925, 2410, 2641
PvuII CAGCTG 2 cut(s) 805, 1703
RsaI GTAC 1 cut(s) 1150
RsaNI GTAC 1 cut(s) 1149
RseI CAYNNNNRTG 1 cut(s) 194
SacI GAGCTC 3 cut(s) 1351, 1884, 1996
SapI GCTCTTC 2 cut(s) 671, 1872
SaqAI TTAA 9 cut(s) 95, 206, 755, 950, 1154, 1850, 2148, 2202, 2388
SatI GCNGC 9 cut(s) 370, 691, 832, 990, 1698, 1701, 2220, 2726, 2858
SchI GAGTC 4 cut(s) 944, 1443, 2137, 2762
ScrFI CCNGG 2 cut(s) 555, 2588
SduI GDGCHC 6 cut(s) 666, 1267, 1334, 1351, 1884, 1996
SexAI ACCWGGT 1 cut(s) 553
SfaNI GCATC 5 cut(s) 702, 2103, 2768, 2773, 2806
SfcI CTRYAG 3 cut(s) 396, 407, 1072
SfuI TTCGAA 1 cut(s) 669
SinI GGWCC 6 cut(s) 308, 380, 402, 524, 1024, 1598
SmiMI CAYNNNNRTG 1 cut(s) 194
SmlI CTYRAG 3 cut(s) 1391, 2147, 2382
SmoI CTYRAG 3 cut(s) 1391, 2147, 2382
SpeI ACTAGT 1 cut(s) 1159
SseBI AGGCCT 3 cut(s) 300, 2683, 2816
SsiI CCGC 5 cut(s) 831, 1278, 2308, 2769, 2858
SspI AATATT 3 cut(s) 420, 1728, 2420
SspMI CTAG 7 cut(s) 503, 932, 1160, 1496, 1545, 1860, 2223
SstI GAGCTC 3 cut(s) 1351, 1884, 1996
StuI AGGCCT 3 cut(s) 300, 2683, 2816
StyD4I CCNGG 2 cut(s) 553, 2586
StyI CCWWGG 6 cut(s) 706, 917, 1053, 1464, 2011, 2349
TaaI ACNGT 6 cut(s) 258, 785, 1021, 1262, 1307, 1952
TaiI ACGT 2 cut(s) 722, 2657
TaqI TCGA 2 cut(s) 669, 1437
TaqII GACCGA 1 cut(s) 2115
TauI GCSGC 2 cut(s) 834, 2860
TfiI GAWTC 9 cut(s) 142, 1399, 1409, 1439, 1469, 1658, 2003, 2175, 2591
Tru1I TTAA 9 cut(s) 95, 206, 755, 950, 1154, 1850, 2148, 2202, 2388
Tru9I TTAA 9 cut(s) 95, 206, 755, 950, 1154, 1850, 2148, 2202, 2388
TscAI CASTG 4 cut(s) 1203, 1411, 1789, 2058
TseFI GTSAC 2 cut(s) 1178, 1194
TseI GCWGC 7 cut(s) 369, 690, 989, 1697, 1700, 2219, 2725
Tsp45I GTSAC 2 cut(s) 1178, 1194
TspGWI ACGGA 2 cut(s) 1133, 1197
TspRI CASTG 4 cut(s) 1203, 1411, 1789, 2058
Van91I CCANNNNNTGG 1 cut(s) 874
Vha464I CTTAAG 1 cut(s) 2147
VpaK11BI GGWCC 6 cut(s) 308, 380, 402, 524, 1024, 1598
VspI ATTAAT 1 cut(s) 950
XagI CCTNNNNNAGG 2 cut(s) 396, 1463
XapI RAATTY 5 cut(s) 223, 273, 433, 1108, 1743
XceI RCATGY 6 cut(s) 193, 568, 662, 754, 797, 1478
XcmI CCANNNNNNNNNTGG 1 cut(s) 952
XspI CTAG 7 cut(s) 503, 932, 1160, 1496, 1545, 1860, 2223
Zsp2I ATGCAT 1 cut(s) 1480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.