RLG00000034118

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000487
Physical Location & Seq
Reverse (-)
36991802 .. 36997848
6047 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034118

Sequence Viewer

Length: 2880 bp
ATGGCAAATGAAATGGCTAAGAAGGTTTTGATGCCCATTGCCTGTAAAGTAATGGGTCGAACCCTTGCCACTCATGTCTTTATGCTGCTTGTGTTAACCAAATTTGTTGGTATTGCAGCAGAGGCGAACACCATGGATTATATTTCCCTGAAGATTCTGATGCAAGCGTGGGACATAAGTTGGGTGGGTTCAGATCCTTGTGATGGCTGGAAAGGTATTGACTGCACGAATGCACGTGTTACCTCCATTATATTGGCAGGCATGGGTTTGAGAGGTCAGCTACCCAGCGATATCCAGTTGTTGTCCGAGCTAGAGACTCTGGACCTATCTTTGAATAAGGACCTGACAGGACCAATTCCAACATCAATTGGAAACTTGACAAAACTAGTGAACTTAAACCTTGCTGGCTGCAGTTTCTCTGAGCCTATTCCTCACACTATAGGAACTTTGAAGAATCTATATTATCTAGATCTGAATAACAATAGACTGAGTGGGCAAATTCCGCCTTCAATTGGTGATCTTTCAAATCTTTTCTATCTGGACCTAACTGGCAACAAACTTCAAGGACACATCCCAGTCAGTAGTGAGGCTACACCGGGTCTTGATATGTTACACAACGCGCAGCATTTTCATTTAGGAGACAATCAGCTCTCAGGCAGAATTCCAACTCAACTTTTCAGCTCAAAGATGGTTCTCTTGCACTTGCTCTTGGATAGAAATAATCTAACTGGCTCATGCCTCTGTAGACTTGGTTGCTCTGGATATAACTTGTTCTGTTACAGGCGCCTTGATTGGAATTCATTAAGTGGGCTGGTGCCTTCAAGCCTCAACAATCTTTCAAACATGACTGTACTGTACTTGTCTAACAACCAGTTGATTGGCCCAGTACCAAACCTTACCGGCATGAATCTCCTCAACTATGTGGATATGAGTAATAATACTTTTGATGTGTCAGAAGTTCCTGATTGGTTTTCAACCTTGCAGTTCTTGACAACATTAATAATGGAAAACACACGGCTTCGGGGACAAGTTCCTCAAGCCCTATTTGGCTTTTACAATTTGCAGACAGTGGTACTAAGGAACAACAATCTCAATGGCTTCTTGGATATTGAAACCAATTACGGCAACCAATTGCAACTAATTGATTTGGGAAAGAACTCCATTACTAATCTTACACAAAGTGGAGAATCCAACTATACATTGATACTTGTTGGCAATCCAATTTGTAATCAGACAAACATGGCCAAGAATTATTGCAATGTTTCTTCTTCAGATTCCTTATACTCAACACCATCAAATAACTGTGTGCCCATTGGCTGTAGTTCGGGAAAAGTTTCCAGCCCGAATTGTAAATGTGCACATCCTTACACAGTAACTCTAGTCTTCTTATATGTCAGTTTCTCAGACTTTGGAAACTCAACTTATTATAGAGAGCTAGAGATCTCTCTCATCCATTCCTTTCGGTCTTACAACATTCCTGTGGATTCAGTTTCTCTGGATTCTACTTTCTTCGACTTATTTTATTACTTTCACATGATCCTAGAGGTTTTCCCATCTGATCAAGATCACTTCAACAAATCAGAAGCTTCAGCACTTGCTTCTGTGCTTAGCAACCAGACTCTCCCACGTCCCCCGTATTTTGGACCCTTCTCTGTTGCATTAAATTATGCTCACTCCGGAGGATCAAACAAGGCCTTGATAATTGGTGTAGCAGTTGGCTGTTCTGTGCTTCTGTTATCAATAGCACTTGTAGGGGTTTATGCTCTCCAACAAAAGAGGAGAGCAAATGAGCAACGAAGCAGAGCAGGCGAGCAACGGAGCAGAGCTCTCCCTTTGGCTTCGATATCAAAAAGCAGTCTTCCTCAGTTCAAAGGAGCAAGATTGTTTTCTTTTAAAGAGCTTAAGGATTGCACCAATAGTTTTTCAGAAGCAAATGATATTGGTTCCGGGGGTTATGGAAAGGTGTATCAGGGAGTACTTCCAACAGGCGAAATGGTTGCCATTAAACGAGCTAAAAGGGAATCTATCCAGGAAGGGATTGAGTTCAAAGCTGAGGTTGAGCTGCTTTCAAGGGTACATCATAAGAATCTTGTGAGCCTTGTTGGTTTTTGTTTGGAGCAAGATGAACAAATGTTGGTATACGAGTATGTTCCAAATGGTAACTTGATGGATAGTCTTTCAGGGAAGTCAGGATTTAGGTTGAACTGGATGAGGAGACTTAAAATAGCCCTTGGCGCAGCGAGAGGACTGGCCTATCTTCATGAGCATGCAAGCCCATCTATTATACACCGGGATGTTAAACCAAACAATATCCTACTAGATAAAGATTTAAATGCAAAAGTTGCCGATTTTGGTCTCTCCAAGTCTATGGCTGGTAGTGGAAGGGATCATGTGACTACTCAAGTTAAGGGGACAATGGGGTACCTGGATCCTGAATATTATATGACTCAACAGTTGACTGAGAAGAGCGACGTGTATAGCTTTGGCGTGGTAATGTTGGAGCTGATAACTGCTAGAAGGCCAATAGAGCGTGGGAGGTATATTGTGAGAGTGGTACAGATGACAATGGATAGGACAAAAGATTTGTACAACCTGCAAGAAATTCTTGATCCAGCCATCGGTTTAGTAACAGAGCTGAAAGGTTTAGAAATGTTTGTCGATCTGGCAATGTCGTGTGTAAAAGAATTACGAGCTAGAAGGCCTACAATGGGGGAAGTGGTGAAAAAGATAGAGAACATCATACAGATTGCAAGTTTGAACGCCGGAGCAAATTCAGCATCCACTTCAGCAGGTTATGAGGATGTGAGTAAGTATAGTAGCGAGGATCCCTACAGCGGTCATGTCCTTGATCATAGTGGGGTTTTCAGCCTACAAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

960

Amino Acids

105.93

Weight (kDa)

6.71

Isoelectric Point (pI)

37.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 145 - 187 1.9e-06 Leucine rich repeat
Pkinase PF00069 642 - 908 9.2e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 645 - 909 5.3e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 2601, 2780
Acc65I GGTACC 1 cut(s) 2421
AccB1I GGYRCC 3 cut(s) 783, 814, 2421
AccI GTMKAC 2 cut(s) 745, 2139
AccII CGCG 1 cut(s) 620
AccIII TCCGGA 1 cut(s) 1676
AciI CCGC 2 cut(s) 503, 2835
AclWI GGATC 9 cut(s) 188, 1531, 1690, 2394, 2423, 2436, 2603, 2819, 2832
AcoI YGGCCR 1 cut(s) 1242
AcsI RAATTY 6 cut(s) 101, 498, 660, 796, 2601, 2770
AcuI CTGAAG 4 cut(s) 170, 1254, 1572, 2769
AcvI CACGTG 1 cut(s) 236
AcyI GRCGYC 1 cut(s) 784
AdeI CACNNNGTG 1 cut(s) 1181
AfaI GTAC 9 cut(s) 852, 857, 888, 1074, 1977, 2076, 2423, 2556, 2588
AfiI CCNNNNNNNGG 6 cut(s) 203, 512, 1640, 2618, 2708, 2834
AflII CTTAAG 1 cut(s) 1901
AflIII ACRYGT 2 cut(s) 235, 2472
AhlI ACTAGT 1 cut(s) 385
AjiI CACGTC 2 cut(s) 1628, 2473
AjnI CCWGG 2 cut(s) 2028, 2424
Alw21I GWGCWC 2 cut(s) 1360, 1828
Alw26I GTCTC 4 cut(s) 308, 633, 2209, 2360
Alw44I GTGCAC 1 cut(s) 1356
AlwI GGATC 9 cut(s) 188, 1531, 1690, 2394, 2423, 2436, 2603, 2819, 2832
Aor13HI TCCGGA 1 cut(s) 1676
AoxI GGCC 6 cut(s) 880, 1242, 1692, 2250, 2519, 2699
ApaLI GTGCAC 1 cut(s) 1356
ApeKI GCWGC 6 cut(s) 85, 116, 408, 622, 2062, 2237
ApoI RAATTY 6 cut(s) 101, 498, 660, 796, 2601, 2770
ArsI GACNNNNNNTTYG 2 cut(s) 2566, 2598
AseI ATTAAT 1 cut(s) 998
Asp700I GAANNNNTTC 1 cut(s) 1333
Asp718I GGTACC 1 cut(s) 2421
AspLEI GCGC 3 cut(s) 622, 786, 2237
AspS9I GGNCC 6 cut(s) 322, 340, 350, 541, 881, 1643
AsuC2I CCSGG 3 cut(s) 597, 1948, 2291
AsuHPI GGTGA 2 cut(s) 527, 2731
AvaII GGWCC 5 cut(s) 322, 340, 350, 541, 1643
BaeGI GKGCMC 2 cut(s) 1311, 1360
BalI TGGCCA 1 cut(s) 1244
BamHI GGATCC 2 cut(s) 2428, 2824
BanI GGYRCC 3 cut(s) 783, 814, 2421
BanII GRGCYC 1 cut(s) 1828
BbrPI CACGTG 1 cut(s) 236
BbsI GAAGAC 2 cut(s) 1375, 1850
Bbv12I GWGCWC 2 cut(s) 1360, 1828
BbvCI CCTCAGC 1 cut(s) 2052
BbvI GCAGC 6 cut(s) 72, 128, 395, 634, 2049, 2249
BccI CCATC 7 cut(s) 197, 682, 1300, 1561, 2161, 2284, 2624
BceAI ACGGC 2 cut(s) 1031, 1138
BcgI CGANNNNNNTGC 2 cut(s) 1979, 2013
BciT130I CCWGG 2 cut(s) 2030, 2426
BclI TGATCA 2 cut(s) 1558, 2848
BcnI CCSGG 3 cut(s) 597, 1948, 2291
BcoDI GTCTC 4 cut(s) 308, 633, 2209, 2360
BcuI ACTAGT 1 cut(s) 385
BfaI CTAG 9 cut(s) 311, 386, 467, 1379, 1436, 1541, 2318, 2514, 2694
BfmI CTRYAG 5 cut(s) 409, 438, 742, 1318, 2830
BfoI RGCGCY 1 cut(s) 787
BfrI CTTAAG 1 cut(s) 1901
BfuAI ACCTGC 2 cut(s) 2601, 2780
BglII AGATCT 2 cut(s) 469, 1440
BisI GCNGC 6 cut(s) 86, 117, 409, 623, 2063, 2238
BlpI GCTNAGC 1 cut(s) 1607
BlsI GCNGC 6 cut(s) 87, 118, 410, 624, 2064, 2239
BmcAI AGTACT 1 cut(s) 1977
Bme1390I CCNGG 5 cut(s) 597, 1948, 2030, 2291, 2426
Bme18I GGWCC 5 cut(s) 322, 340, 350, 541, 1643
BmgBI CACGTC 2 cut(s) 1628, 2473
BmgT120I GGNCC 6 cut(s) 322, 340, 350, 541, 881, 1643
BmiI GGNNCC 7 cut(s) 785, 816, 1645, 1945, 2423, 2430, 2826
BmrFI CCNGG 5 cut(s) 597, 1948, 2030, 2291, 2426
BmrI ACTGGG 2 cut(s) 569, 878
BmsI GCATC 3 cut(s) 21, 150, 2786
BmuI ACTGGG 2 cut(s) 569, 878
BpiI GAAGAC 2 cut(s) 1375, 1850
BplI GAGNNNNNCTC 2 cut(s) 1810, 1842
Bpu10I CCTNAGC 1 cut(s) 2052
Bpu1102I GCTNAGC 1 cut(s) 1607
BpuEI CTTGAG 2 cut(s) 1020, 2385
BpuMI CCSGG 3 cut(s) 597, 1948, 2291
BsaAI YACGTR 1 cut(s) 236
BsaBI GATNNNNATC 1 cut(s) 1563
BsaHI GRCGYC 1 cut(s) 784
BsaI GGTCTC 1 cut(s) 2360
BsaJI CCNNGG 3 cut(s) 132, 1947, 2230
BsaWI WCCGGW 1 cut(s) 1676
Bsc4I CCNNNNNNNGG 6 cut(s) 203, 512, 1640, 2618, 2708, 2834
Bse118I RCCGGY 1 cut(s) 899
Bse1I ACTGG 8 cut(s) 295, 553, 575, 733, 871, 884, 2210, 2253
Bse3DI GCAATG 3 cut(s) 36, 1264, 2673
Bse8I GATNNNNATC 1 cut(s) 1563
BseAI TCCGGA 1 cut(s) 1676
BseBI CCWGG 2 cut(s) 2030, 2426
BseDI CCNNGG 3 cut(s) 132, 1947, 2230
BseGI GGATG 7 cut(s) 570, 1360, 1449, 2214, 2299, 2777, 2806
BseJI GATNNNNATC 1 cut(s) 1563
BseLI CCNNNNNNNGG 6 cut(s) 203, 512, 1640, 2618, 2708, 2834
BseMI GCAATG 3 cut(s) 36, 1264, 2673
BseMII CTCAG 7 cut(s) 411, 479, 666, 1416, 1877, 2043, 2451
BseNI ACTGG 8 cut(s) 295, 553, 575, 733, 871, 884, 2210, 2253
BseRI GAGGAG 3 cut(s) 902, 1792, 2227
BseSI GKGCMC 2 cut(s) 1311, 1360
BseXI GCAGC 6 cut(s) 72, 128, 395, 634, 2049, 2249
BseYI CCCAGC 1 cut(s) 284
BsgI GTGCAG 1 cut(s) 208
Bsh1236I CGCG 1 cut(s) 620
BshFI GGCC 6 cut(s) 882, 1244, 1694, 2252, 2521, 2701
BshNI GGYRCC 3 cut(s) 783, 814, 2421
BsiHKAI GWGCWC 2 cut(s) 1360, 1828
BsiSI CCGG 6 cut(s) 596, 900, 1677, 1947, 2290, 2763
BslFI GGGAC 4 cut(s) 185, 1038, 1614, 2425
BslI CCNNNNNNNGG 6 cut(s) 203, 512, 1640, 2618, 2708, 2834
BsmAI GTCTC 4 cut(s) 308, 633, 2209, 2360
BsmFI GGGAC 4 cut(s) 185, 1038, 1614, 2425
BsmI GAATGC 1 cut(s) 235
BsnI GGCC 6 cut(s) 882, 1244, 1694, 2252, 2521, 2701
Bso31I GGTCTC 1 cut(s) 2360
Bsp1286I GDGCHC 3 cut(s) 1311, 1360, 1828
Bsp13I TCCGGA 1 cut(s) 1676
Bsp1407I TGTACA 1 cut(s) 2586
Bsp1720I GCTNAGC 1 cut(s) 1607
Bsp19I CCATGG 1 cut(s) 132
BspACI CCGC 2 cut(s) 503, 2835
BspANI GGCC 6 cut(s) 882, 1244, 1694, 2252, 2521, 2701
BspCNI CTCAG 7 cut(s) 412, 480, 665, 1415, 1876, 2044, 2452
BspEI TCCGGA 1 cut(s) 1676
BspFNI CGCG 1 cut(s) 620
BspHI TCATGA 1 cut(s) 2260
BspLI GGNNCC 7 cut(s) 785, 816, 1645, 1945, 2423, 2430, 2826
BspMAI CTGCAG 1 cut(s) 413
BspMI ACCTGC 2 cut(s) 2601, 2780
BspPI GGATC 9 cut(s) 188, 1531, 1690, 2394, 2423, 2436, 2603, 2819, 2832
BspQI GCTCTTC 1 cut(s) 2459
BspT107I GGYRCC 3 cut(s) 783, 814, 2421
BspTI CTTAAG 1 cut(s) 1901
BspTNI GGTCTC 1 cut(s) 2360
BsrDI GCAATG 3 cut(s) 36, 1264, 2673
BsrFI RCCGGY 1 cut(s) 899
BsrGI TGTACA 1 cut(s) 2586
BsrI ACTGG 8 cut(s) 295, 553, 575, 733, 871, 884, 2210, 2253
BssAI RCCGGY 1 cut(s) 899
BssECI CCNNGG 3 cut(s) 132, 1947, 2230
BssNAI GTATAC 1 cut(s) 2140
BssNI GRCGYC 1 cut(s) 784
BssT1I CCWWGG 2 cut(s) 132, 2230
Bst1107I GTATAC 1 cut(s) 2140
Bst2UI CCWGG 2 cut(s) 2030, 2426
Bst4CI ACNGT 6 cut(s) 850, 855, 1069, 1304, 1372, 2454
Bst6I CTCTTC 1 cut(s) 2459
BstACI GRCGYC 1 cut(s) 784
BstAFI CTTAAG 1 cut(s) 1901
BstAPI GCANNNNNTGC 1 cut(s) 2342
BstAUI TGTACA 1 cut(s) 2586
BstBAI YACGTR 1 cut(s) 236
BstC8I GCNNGC 7 cut(s) 165, 259, 406, 1807, 1811, 2268, 2272
BstDSI CCRYGG 1 cut(s) 132
BstF5I GGATG 7 cut(s) 570, 1360, 1449, 2214, 2299, 2777, 2806
BstFNI CGCG 1 cut(s) 620
BstH2I RGCGCY 1 cut(s) 787
BstHHI GCGC 3 cut(s) 622, 786, 2237
BstMAI GTCTC 4 cut(s) 308, 633, 2209, 2360
BstMWI GCNNNNNNNGC 7 cut(s) 122, 502, 1806, 2234, 2342, 2527, 2774
BstNI CCWGG 2 cut(s) 2030, 2426
BstNSI RCATGY 1 cut(s) 2270
BstSCI CCNGG 5 cut(s) 595, 1946, 2028, 2289, 2424
BstSFI CTRYAG 5 cut(s) 409, 438, 742, 1318, 2830
BstSLI GKGCMC 2 cut(s) 1311, 1360
BstUI CGCG 1 cut(s) 620
BstV1I GCAGC 6 cut(s) 72, 128, 395, 634, 2049, 2249
BstV2I GAAGAC 2 cut(s) 1375, 1850
BstX2I RGATCY 5 cut(s) 193, 469, 1440, 2428, 2824
BstXI CCANNNNNNTGG 3 cut(s) 253, 878, 2368
BstYI RGATCY 5 cut(s) 193, 469, 1440, 2428, 2824
BstZ17I GTATAC 1 cut(s) 2140
BsuRI GGCC 6 cut(s) 882, 1244, 1694, 2252, 2521, 2701
BtgI CCRYGG 1 cut(s) 132
BtrI CACGTC 2 cut(s) 1628, 2473
BtsCI GGATG 7 cut(s) 570, 1360, 1449, 2214, 2299, 2777, 2806
BtsIMutI CAGTG 1 cut(s) 1074
BveI ACCTGC 2 cut(s) 2601, 2780
Cac8I GCNNGC 7 cut(s) 165, 259, 406, 1807, 1811, 2268, 2272
CciI TCATGA 1 cut(s) 2260
CfoI GCGC 3 cut(s) 622, 786, 2237
Cfr10I RCCGGY 1 cut(s) 899
Cfr13I GGNCC 6 cut(s) 322, 340, 350, 541, 881, 1643
Csp6I GTAC 9 cut(s) 851, 856, 887, 1073, 1976, 2075, 2422, 2555, 2587
CviQI GTAC 9 cut(s) 851, 856, 887, 1073, 1976, 2075, 2422, 2555, 2587
DinI GGCGCC 1 cut(s) 785
DraI TTTAAA 2 cut(s) 1894, 2331
DraIII CACNNNGTG 1 cut(s) 1181
EaeI YGGCCR 1 cut(s) 1242
Eam1104I CTCTTC 1 cut(s) 2459
EarI CTCTTC 1 cut(s) 2459
EciI GGCGGA 1 cut(s) 492
Ecl136II GAGCTC 1 cut(s) 1826
Eco130I CCWWGG 2 cut(s) 132, 2230
Eco147I AGGCCT 2 cut(s) 1694, 2701
Eco24I GRGCYC 1 cut(s) 1828
Eco31I GGTCTC 1 cut(s) 2360
Eco32I GATATC 2 cut(s) 292, 1845
Eco47I GGWCC 5 cut(s) 322, 340, 350, 541, 1643
Eco53kI GAGCTC 1 cut(s) 1826
Eco57I CTGAAG 4 cut(s) 170, 1254, 1572, 2769
Eco72I CACGTG 1 cut(s) 236
EcoICRI GAGCTC 1 cut(s) 1826
EcoO109I RGGNCCY 1 cut(s) 340
EcoRI GAATTC 2 cut(s) 660, 796
EcoRII CCWGG 2 cut(s) 2028, 2424
EcoRV GATATC 2 cut(s) 292, 1845
EcoT14I CCWWGG 2 cut(s) 132, 2230
EcoT38I GRGCYC 1 cut(s) 1828
EgeI GGCGCC 1 cut(s) 785
EheI GGCGCC 1 cut(s) 785
ErhI CCWWGG 2 cut(s) 132, 2230
FalI AAGNNNNNCTT 2 cut(s) 2589, 2621
FaqI GGGAC 4 cut(s) 185, 1038, 1614, 2425
FbaI TGATCA 2 cut(s) 1558, 2848
FblI GTMKAC 2 cut(s) 745, 2139
Fnu4HI GCNGC 6 cut(s) 86, 117, 409, 623, 2063, 2238
FokI GGATG 7 cut(s) 557, 1347, 1436, 2221, 2306, 2764, 2813
FriOI GRGCYC 1 cut(s) 1828
Fsp4HI GCNGC 6 cut(s) 86, 117, 409, 623, 2063, 2238
FspBI CTAG 9 cut(s) 311, 386, 467, 1379, 1436, 1541, 2318, 2514, 2694
GlaI GCGC 3 cut(s) 621, 785, 2236
GluI GCNGC 6 cut(s) 86, 117, 409, 623, 2063, 2238
GsaI CCCAGC 1 cut(s) 288
HaeII RGCGCY 1 cut(s) 787
HaeIII GGCC 6 cut(s) 882, 1244, 1694, 2252, 2521, 2701
HapII CCGG 6 cut(s) 596, 900, 1677, 1947, 2290, 2763
HhaI GCGC 3 cut(s) 622, 786, 2237
Hin1I GRCGYC 1 cut(s) 784
Hin6I GCGC 3 cut(s) 620, 784, 2235
HinP1I GCGC 3 cut(s) 620, 784, 2235
HincII GTYRAC 2 cut(s) 96, 2457
HindII GTYRAC 2 cut(s) 96, 2457
HindIII AAGCTT 1 cut(s) 1584
HpaI GTTAAC 1 cut(s) 96
HpaII CCGG 6 cut(s) 596, 900, 1677, 1947, 2290, 2763
HphI GGTGA 2 cut(s) 527, 2731
Hpy166II GTNNAC 6 cut(s) 96, 391, 746, 1358, 2140, 2457
Hpy8I GTNNAC 6 cut(s) 96, 391, 746, 1358, 2140, 2457
Hpy99I CGWCG 1 cut(s) 2474
HpyAV CCTTC 8 cut(s) 16, 516, 828, 1657, 2027, 2376, 2511, 2691
HpyCH4III ACNGT 6 cut(s) 850, 855, 1069, 1304, 1372, 2454
HpyCH4IV ACGT 3 cut(s) 235, 1627, 2472
HpyF10VI GCNNNNNNNGC 7 cut(s) 122, 502, 1806, 2234, 2342, 2527, 2774
HpySE526I ACGT 3 cut(s) 235, 1627, 2472
Hsp92I GRCGYC 1 cut(s) 784
HspAI GCGC 3 cut(s) 620, 784, 2235
KasI GGCGCC 1 cut(s) 783
Kpn2I TCCGGA 1 cut(s) 1676
KpnI GGTACC 1 cut(s) 2425
Ksp22I TGATCA 2 cut(s) 1558, 2848
KspAI GTTAAC 1 cut(s) 96
LguI GCTCTTC 1 cut(s) 2459
LmnI GCTCC 5 cut(s) 1818, 1874, 2116, 2500, 2765
Lsp1109I GCAGC 6 cut(s) 72, 128, 395, 634, 2049, 2249
LweI GCATC 3 cut(s) 21, 150, 2786
MaeI CTAG 9 cut(s) 311, 386, 467, 1379, 1436, 1541, 2318, 2514, 2694
MaeII ACGT 3 cut(s) 235, 1627, 2472
MaeIII GTNAC 7 cut(s) 238, 609, 776, 1372, 2159, 2392, 2626
MboII GAAGA 9 cut(s) 163, 463, 1257, 1260, 1375, 1501, 1850, 2249, 2476
MfeI CAATTG 3 cut(s) 366, 510, 1130
MflI RGATCY 5 cut(s) 193, 469, 1440, 2428, 2824
MhlI GDGCHC 3 cut(s) 1311, 1360, 1828
MlsI TGGCCA 1 cut(s) 1244
MluNI TGGCCA 1 cut(s) 1244
Mly113I GGCGCC 1 cut(s) 784
MlyI GAGTC 3 cut(s) 310, 1612, 2440
MmeI TCCRAC 6 cut(s) 383, 689, 1215, 1792, 2006, 2478
Mox20I TGGCCA 1 cut(s) 1244
MroI TCCGGA 1 cut(s) 1676
MroXI GAANNNNTTC 1 cut(s) 1333
MscI TGGCCA 1 cut(s) 1244
MslI CAYNNNNRTG 3 cut(s) 1478, 2265, 2292
Msp20I TGGCCA 1 cut(s) 1244
MspA1I CMGCKG 1 cut(s) 2835
MspCI CTTAAG 1 cut(s) 1901
MspI CCGG 6 cut(s) 596, 900, 1677, 1947, 2290, 2763
MspR9I CCNGG 5 cut(s) 597, 1948, 2030, 2291, 2426
MunI CAATTG 3 cut(s) 366, 510, 1130
Mva1269I GAATGC 1 cut(s) 235
MvaI CCWGG 2 cut(s) 2030, 2426
MvnI CGCG 1 cut(s) 620
MwoI GCNNNNNNNGC 7 cut(s) 122, 502, 1806, 2234, 2342, 2527, 2774
NarI GGCGCC 1 cut(s) 784
NciI CCSGG 3 cut(s) 597, 1948, 2291
NcoI CCATGG 1 cut(s) 132
NlaIV GGNNCC 7 cut(s) 785, 816, 1645, 1945, 2423, 2430, 2826
NmuCI GTSAC 1 cut(s) 2392
NspI RCATGY 1 cut(s) 2270
PaeI GCATGC 1 cut(s) 2270
PagI TCATGA 1 cut(s) 2260
PceI AGGCCT 2 cut(s) 1694, 2701
PciSI GCTCTTC 1 cut(s) 2459
PctI GAATGC 1 cut(s) 235
PdmI GAANNNNTTC 1 cut(s) 1333
PfeI GAWTC 9 cut(s) 154, 454, 907, 1187, 1274, 1484, 1499, 2021, 2086
PfoI TCCNGGA 1 cut(s) 2028
PkrI GCNGC 6 cut(s) 87, 118, 410, 624, 2064, 2239
PleI GAGTC 3 cut(s) 310, 1612, 2440
PluTI GGCGCC 1 cut(s) 787
PmaCI CACGTG 1 cut(s) 236
PmlI CACGTG 1 cut(s) 236
PpsI GAGTC 3 cut(s) 310, 1612, 2440
Ppu21I YACGTR 1 cut(s) 236
PpuMI RGGWCCY 1 cut(s) 340
PshBI ATTAAT 1 cut(s) 998
Psp124BI GAGCTC 1 cut(s) 1828
Psp5II RGGWCCY 1 cut(s) 340
Psp6I CCWGG 2 cut(s) 2028, 2424
PspCI CACGTG 1 cut(s) 236
PspFI CCCAGC 1 cut(s) 284
PspGI CCWGG 2 cut(s) 2028, 2424
PspN4I GGNNCC 7 cut(s) 785, 816, 1645, 1945, 2423, 2430, 2826
PspPI GGNCC 6 cut(s) 322, 340, 350, 541, 881, 1643
PspPPI RGGWCCY 1 cut(s) 340
PstI CTGCAG 1 cut(s) 413
PsuI RGATCY 5 cut(s) 193, 469, 1440, 2428, 2824
RsaI GTAC 9 cut(s) 852, 857, 888, 1074, 1977, 2076, 2423, 2556, 2588
RsaNI GTAC 9 cut(s) 851, 856, 887, 1073, 1976, 2075, 2422, 2555, 2587
RseI CAYNNNNRTG 3 cut(s) 1478, 2265, 2292
SacI GAGCTC 1 cut(s) 1828
SapI GCTCTTC 1 cut(s) 2459
SatI GCNGC 6 cut(s) 86, 117, 409, 623, 2063, 2238
Sau96I GGNCC 6 cut(s) 322, 340, 350, 541, 881, 1643
ScaI AGTACT 1 cut(s) 1977
SchI GAGTC 3 cut(s) 310, 1612, 2440
ScrFI CCNGG 5 cut(s) 597, 1948, 2030, 2291, 2426
SduI GDGCHC 3 cut(s) 1311, 1360, 1828
SfaNI GCATC 3 cut(s) 21, 150, 2786
SfcI CTRYAG 5 cut(s) 409, 438, 742, 1318, 2830
SfoI GGCGCC 1 cut(s) 785
SinI GGWCC 5 cut(s) 322, 340, 350, 541, 1643
SmiI ATTTAAAT 1 cut(s) 2331
SmiMI CAYNNNNRTG 3 cut(s) 1478, 2265, 2292
SmlI CTYRAG 3 cut(s) 1035, 1901, 2400
SmoI CTYRAG 3 cut(s) 1035, 1901, 2400
SpeI ACTAGT 1 cut(s) 385
SphI GCATGC 1 cut(s) 2270
SseBI AGGCCT 2 cut(s) 1694, 2701
SsiI CCGC 2 cut(s) 503, 2835
SspDI GGCGCC 1 cut(s) 783
SspI AATATT 1 cut(s) 2438
SspMI CTAG 9 cut(s) 311, 386, 467, 1379, 1436, 1541, 2318, 2514, 2694
SstI GAGCTC 1 cut(s) 1828
StuI AGGCCT 2 cut(s) 1694, 2701
StyD4I CCNGG 5 cut(s) 595, 1946, 2028, 2289, 2424
StyI CCWWGG 2 cut(s) 132, 2230
SwaI ATTTAAAT 1 cut(s) 2331
TaaI ACNGT 6 cut(s) 850, 855, 1069, 1304, 1372, 2454
TaiI ACGT 3 cut(s) 238, 1630, 2475
TaqI TCGA 4 cut(s) 58, 1512, 1841, 2658
TaqII GACCGA 1 cut(s) 1452
TatI WGTACW 4 cut(s) 850, 855, 1975, 2586
TfiI GAWTC 9 cut(s) 154, 454, 907, 1187, 1274, 1484, 1499, 2021, 2086
TscAI CASTG 1 cut(s) 1074
TseFI GTSAC 1 cut(s) 2392
TseI GCWGC 6 cut(s) 85, 116, 408, 622, 2062, 2237
Tsp45I GTSAC 1 cut(s) 2392
TspDTI ATGAA 6 cut(s) 24, 620, 789, 920, 2139, 2249
TspGWI ACGGA 1 cut(s) 1831
TspRI CASTG 1 cut(s) 1074
Vha464I CTTAAG 1 cut(s) 1901
VneI GTGCAC 1 cut(s) 1356
VpaK11BI GGWCC 5 cut(s) 322, 340, 350, 541, 1643
VspI ATTAAT 1 cut(s) 998
XapI RAATTY 6 cut(s) 101, 498, 660, 796, 2601, 2770
XbaI TCTAGA 1 cut(s) 466
XceI RCATGY 1 cut(s) 2270
XmiI GTMKAC 2 cut(s) 745, 2139
XmnI GAANNNNTTC 1 cut(s) 1333
XspI CTAG 9 cut(s) 311, 386, 467, 1379, 1436, 1541, 2318, 2514, 2694
ZrmI AGTACT 1 cut(s) 1977
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.