RchiOBHm_Chr5g0042271

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000487
Physical Location & Seq
Reverse (-)
37044005 .. 37049087
5083 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32068

Sequence Viewer

Length: 2718 bp
ATGACACTCAGGGATGAATGGGGCATCAACCCTCCAAGTTGGGTTGGTTCAGATCCTTGTGGCGACTGGGAAGGTATTACTTGCACCAATTCACAGATCACTGCTATAACATTGGCAGACATGGGTTTGAAAGGCGGGCTACCTAGTGATATCGAGACATTATCTGAGCTACAGATTCTGAATCTGGCTTTCAATGAGAACCTGAAGGGACAACTTCCAGCATCAATTGGAAACTTGACCAAACTAAACACCGTAATCCTGGATGGTTGCAGATTCTCTGGTCCTATTCCAGCTACAATAGGATCTTTAAAGCAACTTTCTTATCTATCTCTGAAAAACAATAGATTTAGTGGTCCAATTCCACCTTCCATTGGCAATCTAGCCAATCTTGTCTTTCTGGACCTATCGGACAACAGGCTTGGGGATTCCATTCCAGTCTCTAATGGGACTGCACCTGGTCTTGATATGTTAAATAAAACAAAGCACTTTCATTTTTCAAATAACCAGCTCTCGGGCAGCATTCCACCTCAACTGTTCAGCTCAAATATGCCTCTGATACATTTGATTTTTGACAGAAATAATTTTACTGGCAGCATCCCTTCCACACTTGGACTTGTGAAAACTCTGGAGGCAGTACGCCTTGATAGAAATTCATTAAGTGGGTCTGTACCTACGAGCCTCAGAAATCTTACAAATGTGTCTGAACTGCACCTGTCCAACAATAAGCTGACTGGCCCGGTGCCCAACCTTACTCTCATGGATTCCCTCAACTATGTGGATATGAGCAATAATACTTTTGATGCGTCAGATATTCCTAATTGGTTTTCAACCTTGAAGTTCTTGACAACATTAATGATGGAAAACACAGGACTTCAGGGACAAGTCCCTCAAGCCCTTTTCAGCCTTCAAAATTTGGAGACAGTGATACTGAAGAACAACAGTCTCAATGGTACATTGGATATTGGAACAAATTATGGCGACCAATTGAACCTAATTGATCTGCAGAAGAACAACATTGCTAATCTTGCACCAATTGATGAGGGATCCAACTACACATTGATTCTAGTTGACAATCCAATTTGTGAGGGGAGTCAGAATAACATGGCAAAGAACTACTGCAATGTTTCTCCTCCTAATTCCTCAATTTCAACTACACCAAGTAATTGTGCTGACTGTAGTTCCGGCCAGGTTGCTTCCCCCAACTGTAAATGTGCATCTCCCTATACACGGACTCTAGTCTTCTTATTTGTTTCTTTCTCAAACTTGGATGACGTCAATTATTACAAAGCTCTCTCAGACAATCTCACAAGATCTTTTCAGTCCAAAAACCTTCCTGTGGATTCAGTTTCACTGAGTCATCCGAGCTGGAGCTCATCTTATCAACTTGAAATTATCATAGAAATTTTCCCATCCGGTGATCAAGTTAGCTTCAACCAAACAGAAAGTTCAGCGATTACATCTGTTATTAGCAACCAGACTCTAGAGGGACGTCCAAATTCTTTTGGACCCTACTCTTTTCTTGTTCTTTACACCAACTCTGGAGGATCAAACAAGGCCGTGATAATTGGAACGGCAATTGGTGGTTCTGTGCTCCTTTCATTATTAGTCCTTGTAGGGCTTTATGCTCTCCACCAGAAGAGAAAAGCAGATGAGTCATTGAGTGGATCGATCCTTTTGACAGGGATTTCAAATAGCAGTGCTAGTGGTCCTCAACTAAAAGGAGCAAGATTGTTCTCATTTGAAGAGCTCAAGAAATGCACCGATGGTTTTTCGGAAGCAAATGATATTGGATCTGGGGGTTATGGCCAGGTGTATAAGGGAATTCTTCCAACAGGCCAAATGGCTGCCATTAAAAGAGCTAAACGGGAATCTCTGCAGGGAGGAGTTGAGTTCAAAGCCGAGGTTGAGCTCCTATCACGAGTACATCATAAGAATCTTGTTGGCCTTGTAGGTTTTTGTTTTGAGCAAGGGGAACAAATATTGGTATATGAGTATGTTCCAAATGGTGATTTGAGGGACAGCCTTTCAGGGAAGTCCGGAATCAGGTTGGACTGGACAAGAAGACTTCAAGTAGCACTTGGTGCAGCGAGAGGTCTGGCATATCTTCATGAACATGCAAACCCAACCATTATACACCGGGACATCAAATCAAACAACATACTACTCGATAAAGATTTAAATGCAAAAGTTGCTGATTTTGGTCTCTCCAAGTCAATTGCTGATAGTGGAATGGACCACTTATCTACTCAAGTTAAAGGGACACTGGGCTACTTGGATCCTGAATATTTTATGACTCAACAGTTGACTGACAAGAGCGACGTGTATAGCTTTGGCGTGGTAATGTTGGAGCTGATAACTGCTAGAAGGCCAATAATGCAAGGGAATTATATAGTGAAAGTGGTACAGATGACAATGGATAAGTCGAAAGATTTGTACAACCTTGATGACATTCTTGATCCATTCATTGGTTTAGGAACAGAGCTGAAAGGTGTAGAAATGTTTGTGGATTTGGCAATGTCTTGTGTAGAAGAACTAAGGGATAAAAGACCAAGAATGGGGGAAGTGGTGAAACAGATAGAGAACATTATACAAATTGCTGCTTTGAACGCCGGTACTAATCCATTGTCAACTTCAGCAAGTTATGAGGAATATGAGTGTAAGGACAGCACCGAGGATGGTTACAGCAGACCCTTTGATTATAGTGGAAAGGGTTTTTGA

Protein Analysis

905

Amino Acids

98.41

Weight (kDa)

5.14

Isoelectric Point (pI)

33.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 46 - 112 1.8e-06 Leucine-rich repeat region
LRR_8 PF13855 81 - 140 1e-05 Leucine rich repeat
LRR_14 PF23598 98 - 325 2.2e-09 Leucine-rich repeat region
Pkinase PF00069 591 - 857 2e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 594 - 858 1.6e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 1275, 1492
AccB1I GGYRCC 1 cut(s) 739
AccB7I CCANNNNNTGG 1 cut(s) 2465
AccIII TCCGGA 1 cut(s) 2036
AciI CCGC 1 cut(s) 135
AcoI YGGCCR 2 cut(s) 1183, 1804
AcsI RAATTY 5 cut(s) 649, 910, 1401, 1495, 1821
AcuI CTGAAG 4 cut(s) 224, 857, 950, 2616
AcyI GRCGYC 2 cut(s) 1272, 1489
AdeI CACNNNGTG 1 cut(s) 2081
AfaI GTAC 7 cut(s) 636, 669, 952, 1923, 2403, 2435, 2614
AfiI CCNNNNNNNGG 7 cut(s) 371, 511, 1227, 1336, 2043, 2465, 2555
AflIII ACRYGT 1 cut(s) 2319
AjiI CACGTC 1 cut(s) 2320
AjnI CCWGG 4 cut(s) 258, 454, 1185, 1806
AjuI GAANNNNNNNTTGG 2 cut(s) 349, 381
Alw21I GWGCWC 4 cut(s) 1373, 1593, 1749, 1911
Alw26I GTCTC 5 cut(s) 149, 442, 911, 947, 2207
AlwNI CAGNNNCTG 1 cut(s) 178
Ama87I CYCGRG 1 cut(s) 511
Aor13HI TCCGGA 1 cut(s) 2036
AoxI GGCC 7 cut(s) 733, 1183, 1554, 1804, 1834, 1942, 2366
ApeKI GCWGC 5 cut(s) 516, 591, 1844, 2084, 2597
ApoI RAATTY 5 cut(s) 649, 910, 1401, 1495, 1821
AseI ATTAAT 1 cut(s) 851
AspS9I GGNCC 7 cut(s) 281, 353, 400, 734, 1505, 1706, 2233
AsuC2I CCSGG 2 cut(s) 737, 2138
AsuHPI GGTGA 3 cut(s) 1427, 2018, 2578
AvaI CYCGRG 1 cut(s) 511
AvaII GGWCC 6 cut(s) 281, 353, 400, 1505, 1706, 2233
BaeGI GKGCMC 1 cut(s) 744
BalI TGGCCA 1 cut(s) 1806
BamHI GGATCC 2 cut(s) 1043, 2275
BanI GGYRCC 1 cut(s) 739
BanII GRGCYC 3 cut(s) 1373, 1749, 1911
BauI CACGAG 1 cut(s) 1917
BbsI GAAGAC 2 cut(s) 1231, 2068
Bbv12I GWGCWC 4 cut(s) 1373, 1593, 1749, 1911
BbvI GCAGC 5 cut(s) 528, 603, 1831, 2096, 2584
BccI CCATC 5 cut(s) 257, 850, 1417, 1757, 2669
BceAI ACGGC 2 cut(s) 1541, 1587
BciT130I CCWGG 4 cut(s) 260, 456, 1187, 1808
BclI TGATCA 1 cut(s) 1417
BcnI CCSGG 2 cut(s) 737, 2138
BcoDI GTCTC 5 cut(s) 149, 442, 911, 947, 2207
BfaI CTAG 7 cut(s) 144, 380, 1064, 1235, 1481, 1701, 2361
BfmI CTRYAG 4 cut(s) 170, 1001, 1174, 1874
BglII AGATCT 1 cut(s) 1310
BisI GCNGC 5 cut(s) 517, 592, 1845, 2085, 2598
BlsI GCNGC 5 cut(s) 518, 593, 1846, 2086, 2599
Bme1390I CCNGG 6 cut(s) 260, 456, 737, 1187, 1808, 2138
Bme18I GGWCC 6 cut(s) 281, 353, 400, 1505, 1706, 2233
BmeT110I CYCGRG 1 cut(s) 511
BmgBI CACGTC 1 cut(s) 2320
BmgT120I GGNCC 7 cut(s) 281, 353, 400, 734, 1505, 1706, 2233
BmiI GGNNCC 4 cut(s) 741, 1045, 1507, 2277
BmrFI CCNGG 6 cut(s) 260, 456, 737, 1187, 1808, 2138
BmrI ACTGGG 2 cut(s) 76, 2273
BmsI GCATC 5 cut(s) 33, 230, 603, 790, 1223
BmuI ACTGGG 2 cut(s) 76, 2273
BoxI GACNNNNGTC 1 cut(s) 1235
BpiI GAAGAC 2 cut(s) 1231, 2068
BpmI CTGGAG 3 cut(s) 647, 1387, 1560
BpuEI CTTGAG 3 cut(s) 873, 1733, 2232
BpuMI CCSGG 2 cut(s) 737, 2138
Bsa29I ATCGAT 1 cut(s) 1667
BsaHI GRCGYC 2 cut(s) 1272, 1489
BsaI GGTCTC 1 cut(s) 2207
BsaJI CCNNGG 2 cut(s) 1899, 2670
BsaWI WCCGGW 2 cut(s) 1412, 2036
Bsc4I CCNNNNNNNGG 7 cut(s) 371, 511, 1227, 1336, 2043, 2465, 2555
Bse118I RCCGGY 1 cut(s) 2609
Bse1I ACTGG 6 cut(s) 71, 434, 592, 736, 2057, 2268
Bse3DI GCAATG 3 cut(s) 1014, 1126, 2520
BseAI TCCGGA 1 cut(s) 2036
BseBI CCWGG 4 cut(s) 260, 456, 1187, 1808
BseCI ATCGAT 1 cut(s) 1667
BseDI CCNNGG 2 cut(s) 1899, 2670
BseGI GGATG 7 cut(s) 19, 268, 594, 1273, 1357, 1409, 2680
BseLI CCNNNNNNNGG 7 cut(s) 371, 511, 1227, 1336, 2043, 2465, 2555
BseMI GCAATG 3 cut(s) 1014, 1126, 2520
BseMII CTCAG 5 cut(s) 22, 156, 694, 1308, 1343
BseNI ACTGG 6 cut(s) 71, 434, 592, 736, 2057, 2268
BseRI GAGGAG 2 cut(s) 1119, 1896
BseSI GKGCMC 1 cut(s) 744
BseXI GCAGC 5 cut(s) 528, 603, 1831, 2096, 2584
BsgI GTGCAG 3 cut(s) 435, 692, 2103
BshFI GGCC 7 cut(s) 735, 1185, 1556, 1806, 1836, 1944, 2368
BshNI GGYRCC 1 cut(s) 739
BshVI ATCGAT 1 cut(s) 1667
BsiHKAI GWGCWC 4 cut(s) 1373, 1593, 1749, 1911
BsiHKCI CYCGRG 1 cut(s) 511
BsiSI CCGG 6 cut(s) 737, 1182, 1413, 2037, 2137, 2610
BslFI GGGAC 8 cut(s) 222, 460, 869, 891, 1500, 2030, 2153, 2272
BslI CCNNNNNNNGG 7 cut(s) 371, 511, 1227, 1336, 2043, 2465, 2555
BsmAI GTCTC 5 cut(s) 149, 442, 911, 947, 2207
BsmFI GGGAC 8 cut(s) 222, 460, 869, 891, 1500, 2030, 2153, 2272
BsmI GAATGC 1 cut(s) 519
BsnI GGCC 7 cut(s) 735, 1185, 1556, 1806, 1836, 1944, 2368
Bso31I GGTCTC 1 cut(s) 2207
BsoBI CYCGRG 1 cut(s) 511
Bsp1286I GDGCHC 5 cut(s) 744, 1373, 1593, 1749, 1911
Bsp13I TCCGGA 1 cut(s) 2036
Bsp1407I TGTACA 1 cut(s) 2433
BspACI CCGC 1 cut(s) 135
BspANI GGCC 7 cut(s) 735, 1185, 1556, 1806, 1836, 1944, 2368
BspCNI CTCAG 5 cut(s) 21, 157, 693, 1307, 1344
BspDI ATCGAT 1 cut(s) 1667
BspEI TCCGGA 1 cut(s) 2036
BspHI TCATGA 1 cut(s) 2107
BspLI GGNNCC 4 cut(s) 741, 1045, 1507, 2277
BspMAI CTGCAG 2 cut(s) 1005, 1878
BspQI GCTCTTC 1 cut(s) 1737
BspT107I GGYRCC 1 cut(s) 739
BspTNI GGTCTC 1 cut(s) 2207
BsrDI GCAATG 3 cut(s) 1014, 1126, 2520
BsrFI RCCGGY 1 cut(s) 2609
BsrGI TGTACA 1 cut(s) 2433
BsrI ACTGG 6 cut(s) 71, 434, 592, 736, 2057, 2268
BssAI RCCGGY 1 cut(s) 2609
BssECI CCNNGG 2 cut(s) 1899, 2670
BssNI GRCGYC 2 cut(s) 1272, 1489
BssSI CACGAG 1 cut(s) 1917
Bst2BI CACGAG 1 cut(s) 1917
Bst2UI CCWGG 4 cut(s) 260, 456, 1187, 1808
Bst4CI ACNGT 7 cut(s) 253, 534, 922, 941, 1175, 1205, 2301
Bst6I CTCTTC 2 cut(s) 1631, 1737
BstACI GRCGYC 2 cut(s) 1272, 1489
BstAPI GCANNNNNTGC 2 cut(s) 2081, 2189
BstAUI TGTACA 1 cut(s) 2433
BstC8I GCNNGC 1 cut(s) 137
BstDEI CTNAG 6 cut(s) 8, 165, 680, 1294, 1352, 2534
BstF5I GGATG 7 cut(s) 19, 268, 594, 1273, 1357, 1409, 2680
BstMAI GTCTC 5 cut(s) 149, 442, 911, 947, 2207
BstMWI GCNNNNNNNGC 5 cut(s) 1025, 2081, 2189, 2374, 2606
BstNI CCWGG 4 cut(s) 260, 456, 1187, 1808
BstNSI RCATGY 1 cut(s) 2117
BstPAI GACNNNNGTC 1 cut(s) 1235
BstSCI CCNGG 6 cut(s) 258, 454, 735, 1185, 1806, 2136
BstSFI CTRYAG 4 cut(s) 170, 1001, 1174, 1874
BstSLI GKGCMC 1 cut(s) 744
BstV1I GCAGC 5 cut(s) 528, 603, 1831, 2096, 2584
BstV2I GAAGAC 2 cut(s) 1231, 2068
BstX2I RGATCY 6 cut(s) 52, 302, 1043, 1310, 1790, 2275
BstYI RGATCY 6 cut(s) 52, 302, 1043, 1310, 1790, 2275
Bsu15I ATCGAT 1 cut(s) 1667
BsuRI GGCC 7 cut(s) 735, 1185, 1556, 1806, 1836, 1944, 2368
BsuTUI ATCGAT 1 cut(s) 1667
BtrI CACGTC 1 cut(s) 2320
BtsCI GGATG 7 cut(s) 19, 268, 594, 1273, 1357, 1409, 2680
BtsI GCAGTG 2 cut(s) 99, 1702
BtsIMutI CAGTG 5 cut(s) 99, 927, 1349, 1702, 2261
Cac8I GCNNGC 1 cut(s) 137
CaiI CAGNNNCTG 1 cut(s) 178
CciI TCATGA 1 cut(s) 2107
Cfr10I RCCGGY 1 cut(s) 2609
Cfr13I GGNCC 7 cut(s) 281, 353, 400, 734, 1505, 1706, 2233
ClaI ATCGAT 1 cut(s) 1667
CseI GACGC 1 cut(s) 792
CsiI ACCWGGT 1 cut(s) 454
Csp6I GTAC 7 cut(s) 635, 668, 951, 1922, 2402, 2434, 2613
CviAII CATG 5 cut(s) 121, 757, 1102, 2108, 2114
CviQI GTAC 7 cut(s) 635, 668, 951, 1922, 2402, 2434, 2613
DdeI CTNAG 6 cut(s) 8, 165, 680, 1294, 1352, 2534
DraI TTTAAA 2 cut(s) 309, 2178
DraIII CACNNNGTG 1 cut(s) 2081
EaeI YGGCCR 2 cut(s) 1183, 1804
Eam1104I CTCTTC 2 cut(s) 1631, 1737
EarI CTCTTC 2 cut(s) 1631, 1737
Ecl136II GAGCTC 3 cut(s) 1371, 1747, 1909
Eco24I GRGCYC 3 cut(s) 1373, 1749, 1911
Eco31I GGTCTC 1 cut(s) 2207
Eco32I GATATC 1 cut(s) 151
Eco47I GGWCC 6 cut(s) 281, 353, 400, 1505, 1706, 2233
Eco53kI GAGCTC 3 cut(s) 1371, 1747, 1909
Eco57I CTGAAG 4 cut(s) 224, 857, 950, 2616
Eco88I CYCGRG 1 cut(s) 511
EcoICRI GAGCTC 3 cut(s) 1371, 1747, 1909
EcoRI GAATTC 1 cut(s) 1821
EcoRII CCWGG 4 cut(s) 258, 454, 1185, 1806
EcoRV GATATC 1 cut(s) 151
EcoT38I GRGCYC 3 cut(s) 1373, 1749, 1911
FaeI CATG 5 cut(s) 124, 760, 1105, 2111, 2117
FalI AAGNNNNNCTT 2 cut(s) 2061, 2093
FaqI GGGAC 8 cut(s) 222, 460, 869, 891, 1500, 2030, 2153, 2272
FatI CATG 5 cut(s) 120, 756, 1101, 2107, 2113
FauI CCCGC 1 cut(s) 128
FbaI TGATCA 1 cut(s) 1417
Fnu4HI GCNGC 5 cut(s) 517, 592, 1845, 2085, 2598
FokI GGATG 7 cut(s) 26, 275, 581, 1280, 1344, 1396, 2687
FriOI GRGCYC 3 cut(s) 1373, 1749, 1911
Fsp4HI GCNGC 5 cut(s) 517, 592, 1845, 2085, 2598
FspBI CTAG 7 cut(s) 144, 380, 1064, 1235, 1481, 1701, 2361
GluI GCNGC 5 cut(s) 517, 592, 1845, 2085, 2598
GsuI CTGGAG 3 cut(s) 647, 1387, 1560
HaeIII GGCC 7 cut(s) 735, 1185, 1556, 1806, 1836, 1944, 2368
HapII CCGG 6 cut(s) 737, 1182, 1413, 2037, 2137, 2610
HgaI GACGC 1 cut(s) 792
Hin1I GRCGYC 2 cut(s) 1272, 1489
Hin1II CATG 5 cut(s) 124, 760, 1105, 2111, 2117
HincII GTYRAC 3 cut(s) 1069, 2304, 2628
HindII GTYRAC 3 cut(s) 1069, 2304, 2628
HpaII CCGG 6 cut(s) 737, 1182, 1413, 2037, 2137, 2610
HphI GGTGA 3 cut(s) 1427, 2018, 2578
Hpy166II GTNNAC 3 cut(s) 1069, 2304, 2628
Hpy8I GTNNAC 3 cut(s) 1069, 2304, 2628
Hpy99I CGWCG 1 cut(s) 2321
HpyAV CCTTC 7 cut(s) 65, 199, 375, 609, 914, 1340, 2358
HpyCH4III ACNGT 7 cut(s) 253, 534, 922, 941, 1175, 1205, 2301
HpyCH4IV ACGT 3 cut(s) 1272, 1489, 2319
HpyF10VI GCNNNNNNNGC 5 cut(s) 1025, 2081, 2189, 2374, 2606
HpyF3I CTNAG 6 cut(s) 8, 165, 680, 1294, 1352, 2534
HpySE526I ACGT 3 cut(s) 1272, 1489, 2319
Hsp92I GRCGYC 2 cut(s) 1272, 1489
Hsp92II CATG 5 cut(s) 124, 760, 1105, 2111, 2117
Kpn2I TCCGGA 1 cut(s) 2036
Ksp22I TGATCA 1 cut(s) 1417
LguI GCTCTTC 1 cut(s) 1737
LmnI GCTCC 5 cut(s) 1368, 1596, 1721, 1914, 2347
Lsp1109I GCAGC 5 cut(s) 528, 603, 1831, 2096, 2584
LweI GCATC 5 cut(s) 33, 230, 603, 790, 1223
MabI ACCWGGT 1 cut(s) 454
MaeI CTAG 7 cut(s) 144, 380, 1064, 1235, 1481, 1701, 2361
MaeII ACGT 3 cut(s) 1272, 1489, 2319
MaeIII GTNAC 1 cut(s) 2678
MboII GAAGA 9 cut(s) 943, 1018, 1231, 1648, 1754, 1817, 2073, 2096, 2540
MfeI CAATTG 5 cut(s) 225, 983, 1032, 1575, 2214
MflI RGATCY 6 cut(s) 52, 302, 1043, 1310, 1790, 2275
MhlI GDGCHC 5 cut(s) 744, 1373, 1593, 1749, 1911
MlsI TGGCCA 1 cut(s) 1806
MluNI TGGCCA 1 cut(s) 1806
MlyI GAGTC 6 cut(s) 1099, 1225, 1363, 1471, 1661, 2287
MmeI TCCRAC 5 cut(s) 741, 1071, 1853, 2028, 2325
Mox20I TGGCCA 1 cut(s) 1806
MroI TCCGGA 1 cut(s) 2036
MscI TGGCCA 1 cut(s) 1806
MseI TTAA 7 cut(s) 308, 470, 656, 851, 1851, 2177, 2253
MslI CAYNNNNRTG 1 cut(s) 2112
Msp20I TGGCCA 1 cut(s) 1806
MspI CCGG 6 cut(s) 737, 1182, 1413, 2037, 2137, 2610
MspR9I CCNGG 6 cut(s) 260, 456, 737, 1187, 1808, 2138
MunI CAATTG 5 cut(s) 225, 983, 1032, 1575, 2214
Mva1269I GAATGC 1 cut(s) 519
MvaI CCWGG 4 cut(s) 260, 456, 1187, 1808
MwoI GCNNNNNNNGC 5 cut(s) 1025, 2081, 2189, 2374, 2606
NciI CCSGG 2 cut(s) 737, 2138
NlaIII CATG 5 cut(s) 124, 760, 1105, 2111, 2117
NlaIV GGNNCC 4 cut(s) 741, 1045, 1507, 2277
NmeAIII GCCGAG 1 cut(s) 1924
NspI RCATGY 1 cut(s) 2117
PagI TCATGA 1 cut(s) 2107
PciSI GCTCTTC 1 cut(s) 1737
PctI GAATGC 1 cut(s) 519
PflMI CCANNNNNTGG 1 cut(s) 2465
PfoI TCCNGGA 1 cut(s) 258
PkrI GCNGC 5 cut(s) 518, 593, 1846, 2086, 2599
PleI GAGTC 6 cut(s) 1098, 1225, 1362, 1471, 1660, 2287
PpsI GAGTC 6 cut(s) 1098, 1225, 1362, 1471, 1660, 2287
PshAI GACNNNNGTC 1 cut(s) 1235
PshBI ATTAAT 1 cut(s) 851
Psp124BI GAGCTC 3 cut(s) 1373, 1749, 1911
Psp6I CCWGG 4 cut(s) 258, 454, 1185, 1806
PspGI CCWGG 4 cut(s) 258, 454, 1185, 1806
PspN4I GGNNCC 4 cut(s) 741, 1045, 1507, 2277
PspPI GGNCC 7 cut(s) 281, 353, 400, 734, 1505, 1706, 2233
PstI CTGCAG 2 cut(s) 1005, 1878
PstNI CAGNNNCTG 1 cut(s) 178
PsuI RGATCY 6 cut(s) 52, 302, 1043, 1310, 1790, 2275
RsaI GTAC 7 cut(s) 636, 669, 952, 1923, 2403, 2435, 2614
RsaNI GTAC 7 cut(s) 635, 668, 951, 1922, 2402, 2434, 2613
RseI CAYNNNNRTG 1 cut(s) 2112
SacI GAGCTC 3 cut(s) 1373, 1749, 1911
SapI GCTCTTC 1 cut(s) 1737
SaqAI TTAA 7 cut(s) 308, 470, 656, 851, 1851, 2177, 2253
SatI GCNGC 5 cut(s) 517, 592, 1845, 2085, 2598
Sau96I GGNCC 7 cut(s) 281, 353, 400, 734, 1505, 1706, 2233
SchI GAGTC 6 cut(s) 1099, 1225, 1363, 1471, 1661, 2287
ScrFI CCNGG 6 cut(s) 260, 456, 737, 1187, 1808, 2138
SduI GDGCHC 5 cut(s) 744, 1373, 1593, 1749, 1911
SexAI ACCWGGT 1 cut(s) 454
SfaNI GCATC 5 cut(s) 33, 230, 603, 790, 1223
SfcI CTRYAG 4 cut(s) 170, 1001, 1174, 1874
SinI GGWCC 6 cut(s) 281, 353, 400, 1505, 1706, 2233
SmiI ATTTAAAT 1 cut(s) 2178
SmiMI CAYNNNNRTG 1 cut(s) 2112
SmlI CTYRAG 3 cut(s) 888, 1748, 2247
SmoI CTYRAG 3 cut(s) 888, 1748, 2247
SsiI CCGC 1 cut(s) 135
SspI AATATT 2 cut(s) 1980, 2285
SspMI CTAG 7 cut(s) 144, 380, 1064, 1235, 1481, 1701, 2361
SstI GAGCTC 3 cut(s) 1373, 1749, 1911
StyD4I CCNGG 6 cut(s) 258, 454, 735, 1185, 1806, 2136
SwaI ATTTAAAT 1 cut(s) 2178
TaaI ACNGT 7 cut(s) 253, 534, 922, 941, 1175, 1205, 2301
TaiI ACGT 3 cut(s) 1275, 1492, 2322
TaqI TCGA 4 cut(s) 153, 1667, 2166, 2423
TatI WGTACW 2 cut(s) 1921, 2433
Tru1I TTAA 7 cut(s) 308, 470, 656, 851, 1851, 2177, 2253
Tru9I TTAA 7 cut(s) 308, 470, 656, 851, 1851, 2177, 2253
TscAI CASTG 5 cut(s) 106, 927, 1356, 1702, 2268
TseI GCWGC 5 cut(s) 516, 591, 1844, 2084, 2597
TspDTI ATGAA 7 cut(s) 30, 479, 642, 1587, 2096, 2124, 2452
TspGWI ACGGA 1 cut(s) 1243
TspRI CASTG 5 cut(s) 106, 927, 1356, 1702, 2268
Van91I CCANNNNNTGG 1 cut(s) 2465
VpaK11BI GGWCC 6 cut(s) 281, 353, 400, 1505, 1706, 2233
VspI ATTAAT 1 cut(s) 851
XapI RAATTY 5 cut(s) 649, 910, 1401, 1495, 1821
XbaI TCTAGA 1 cut(s) 1480
XceI RCATGY 1 cut(s) 2117
XspI CTAG 7 cut(s) 144, 380, 1064, 1235, 1481, 1701, 2361
ZraI GACGTC 2 cut(s) 1273, 1490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.