Rw5G026520

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000487
Physical Location & Seq
Reverse (-)
38410019 .. 38416340
6322 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G026520.1

Sequence Viewer

Length: 2814 bp
ATGGGTCGAACCCTTGCCACTCATGTCTTTATGCTGCTTGTGTTAACCAAATTTGTTGGTATTGCAGCAGAGGCAAACAACATGGATTATATTTCCCTGAAGATTCTGATGCAAGCGTGGGACATAAGTTGGGTGGGCTCAGATCCTTGTGATGGCTGGAAAGGTATTGACTGCACGAATGCCCGTGTTACCTCGATAATATTGGCAGGCATGGGTTTGAGAGGTCAGCTACCCAGCGATATCCAGTTGTTGTCCGAGCTAGAGACTCTGGACCTATCTTTGAATAAGGACCTGACAGGACCAATTCCAACATCAATTGGAAACTTGAAAAAACTAGTGAACTTAAACCTTGCTGGCTGCAGTTTCTCTGAGCCTATTCCTCACACTATAGGAACTTTGAAGAATCTATATTATCTAGATCTGAATAACAATAGACTGAGTGGGCAAATTCCGCCTTCAATTGGTGATCTTTCAAATCTTTTCTATCTGGACCTAACTAGCAACAAACTTCAAGGATACATCCCAGTCAGTAGTGAGGTTACACCGGGTCTTGATATGTTACACAAGGCGCAGCATTTTCATTTAGGAGACAATCTGCTCTCAGGCGGAATTCCACCTCAACTTTTCAGCTCAAAGATGGTTCTGGTGCACTTGCTCTTGGATAGAAATAATCTAACTGGCGAGATCCCTTCCACACTCGGACTTGTACAGACGCTGGTGACAGTGCGCCTTGATTGGAATTCATTAAGTGGGCGGGTGCCTTCAAGCCTCAACAATCTTTCAAACATGACTGTACTGTACTTGTCTAACAATCAGTTGATTGGCCCAGTACCAAACCTTACCGGCATGAATCCCCTCAACTATGTGGATTTGAGTAATAATACTTTTGATGAGTCAGAAGTTCCTGATTGGTTTTCAACCTTGCAGTTCTTGACGACATTAATAATGGAAAACACACGGCTTCAGGGACAAGTTCCTCAAGCCCTATTTGGCTTTTACAATTTGCAGACAGTGGTACTAAGGAACAACAATCTCAATGGCTTCTTGGATATTGAAACCAATTACGGCAACCAACTGCGACTAATTGATTTGGAAAAGAACTCCATTACTAATCTTGCACAAAGTGGAGAATCCAACTATACATTGATACTTGTTGGTAATCCAATTTGTGATCAGACAAACATGGCCAAGAATTATTGCATTGTTTCTTCATCAGATTCCTTATACTCAACACCACCAAATAACTGTGCGCCCATTGGCTGTAGTTCGGGAAAAGTTTCCAGCCCGAATTGTAAATGTGCACATCCTTACACAGTAACTCTAGTCTTCTTATATGTCAGTTTCTCAGACTTGGGAAACTCAACTTATTACACAGAGCTAGAGATCTCTCTCATCCAATCTTTTCGGTCTTACAACCTTCCTGTGGATTCAGTTTCTCTGGGTTCTCCTTTCTTCGACTTATTTTATTACTTTCACCTGATCCTAGAGGTTTTCCCATCTGATCAAGATCACTTCAACAAGTCAGAAGCTTCAGCACTTGCTTCTGTGCTTAGCAACCAGACTCTCCCACGTCCCCCGTATTTTGGACCCTTCTCTGTTGCATTAAATTATGCTCACTTCGGAGGATCAAACAAGGCCTTGATAATTGGTGCAGCAGTTGGCTGTTCTGTGCTTCTGTTATCAATAGCACTTGTAGGGCTTTATGCTCTCCAACAAAAGAGGAGAGCAAATAAGCAACGAAGCAGGGCAGACGAGCAACGGAGCAGAGCACTCCCTTTGCAGGCTTTGATATCAAAAAGCAGTCTTCCTCAGTTAAAAGGAGCAAGATTGTTTTCTTTTAAAGAGCTTAAGGATTGCACCAATAGTTTTTCAGAAGCAAATGATATTGGTTCCGGGGGTTATGGAAAGGTGTATCAGGGAGTACTTCCAACAGGCGAAATGGTTGCCATTAAACGAGCTAAAAGGGAATCTATCCAGGAAGGGATTGAGTTCAAAGCTGAGGTTGAGCTGCTTTCAAGGGTACATCATAAGAATCTTGTGAGCCTTGTTGGTTTTTGTTTGGAGCAAGATGAACAAATGTTGGTATACGAGTATGTTCCAAATGGTAACTTGATGGATAGTCTTTCAGGGAAGTCAGGATTTAGGTTGAGCTGGATGAGGAGACTTAAAGTAGCCCTTGGCGCAGCGAGAGGACTGGCCTATCTTCATGAGCATGCAACCCCATCTATTATACACCGGGATGTTAAACCAAACAATATCCTACTAGATAAAGATTTAAATGCAAAAGTTGCCGATTTTGGTCTCTCCAAGTCAATGGCTGGTAGTGGAAGGGATCATGTGACTACTCAAGTTAAGGGGACAATGGGGTACCTGGATCCTGAATATTATATGACTCAACAGTTGACTGAGAAGAGCGACGTGTATAGCTTTGGCGTGGTAATGTTGGAGCTGATAACTGCTAGAAGGCCAATAGAGCGTGGGAGGTATATTGTGAGAGTGGTACAGATGACAATGGATAGGACAAAAGATTTGTACAACCTGCAAGAAATTCTTGATCCAGCCATCGGTTTAGCAACAGAGCTGAAAGGTTTAGAAATGTTTGTCGATCTGGCAATGTCGTGTGTAAAAGAATTACGAGCTAGAAGGCCTAGAATGGGGGAAGTGGTGAAAGAGATAGAGAACATTATACAGATTGCAAGTTTGAACGCCGGAGCAAATTCAGCATCCACTTCAGCAGGTTATGAGGATAGTAGCGAGGATCCCTACAGCGGTCATGTCCTTGATCATAGTGGGGTTTTCAACCTACAGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

937

Amino Acids

103.34

Weight (kDa)

6.02

Isoelectric Point (pI)

38.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 128 - 170 8.4e-06 Leucine rich repeat
Pkinase PF00069 624 - 889 1.8e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 627 - 891 6.9e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 2547, 2726
Acc65I GGTACC 1 cut(s) 2367
AccB1I GGYRCC 2 cut(s) 757, 2367
AccI GTMKAC 1 cut(s) 2085
AciI CCGC 4 cut(s) 452, 606, 754, 2769
AcoI YGGCCR 1 cut(s) 1185
AcsI RAATTY 6 cut(s) 50, 447, 609, 739, 2547, 2716
AcuI CTGAAG 4 cut(s) 119, 947, 1515, 2715
AdeI CACNNNGTG 1 cut(s) 1124
AfiI CCNNNNNNNGG 8 cut(s) 152, 461, 1423, 1583, 1780, 2564, 2654, 2768
AflII CTTAAG 1 cut(s) 1847
AflIII ACRYGT 1 cut(s) 2418
AhlI ACTAGT 1 cut(s) 334
AjiI CACGTC 2 cut(s) 1571, 2419
AjnI CCWGG 2 cut(s) 1974, 2370
Alw21I GWGCWC 3 cut(s) 651, 1303, 1771
Alw26I GTCTC 4 cut(s) 257, 582, 2155, 2306
Alw44I GTGCAC 2 cut(s) 647, 1299
AlwNI CAGNNNCTG 1 cut(s) 715
AoxI GGCC 6 cut(s) 823, 1185, 1635, 2196, 2465, 2645
ApaLI GTGCAC 2 cut(s) 647, 1299
ApeKI GCWGC 7 cut(s) 34, 65, 357, 571, 1652, 2008, 2183
ApoI RAATTY 6 cut(s) 50, 447, 609, 739, 2547, 2716
ArsI GACNNNNNNTTYG 2 cut(s) 2512, 2544
AseI ATTAAT 1 cut(s) 941
Asp700I GAANNNNTTC 1 cut(s) 1276
Asp718I GGTACC 1 cut(s) 2367
AspLEI GCGC 4 cut(s) 571, 729, 1252, 2183
AspS9I GGNCC 6 cut(s) 271, 289, 299, 490, 824, 1586
AsuC2I CCSGG 3 cut(s) 546, 1894, 2237
AsuHPI GGTGA 4 cut(s) 476, 730, 1466, 2677
AvaII GGWCC 5 cut(s) 271, 289, 299, 490, 1586
BaeGI GKGCMC 2 cut(s) 651, 1303
BalI TGGCCA 1 cut(s) 1187
BamHI GGATCC 2 cut(s) 2374, 2758
BanI GGYRCC 2 cut(s) 757, 2367
BanII GRGCYC 1 cut(s) 140
BbsI GAAGAC 2 cut(s) 1318, 1796
Bbv12I GWGCWC 3 cut(s) 651, 1303, 1771
BbvCI CCTCAGC 1 cut(s) 1998
BbvI GCAGC 7 cut(s) 21, 77, 344, 583, 1664, 1995, 2195
BccI CCATC 6 cut(s) 146, 631, 1504, 2107, 2230, 2570
BceAI ACGGC 2 cut(s) 974, 1081
BcgI CGANNNNNNTGC 2 cut(s) 1925, 1959
BciT130I CCWGG 2 cut(s) 1976, 2372
BciVI GTATCC 1 cut(s) 509
BclI TGATCA 3 cut(s) 1171, 1501, 2782
BcnI CCSGG 3 cut(s) 546, 1894, 2237
BcoDI GTCTC 4 cut(s) 257, 582, 2155, 2306
BcuI ACTAGT 1 cut(s) 334
BfmI CTRYAG 5 cut(s) 358, 387, 1261, 2764, 2804
BfrI CTTAAG 1 cut(s) 1847
BfuAI ACCTGC 2 cut(s) 2547, 2726
BfuI GTATCC 1 cut(s) 509
BglII AGATCT 2 cut(s) 418, 1383
BisI GCNGC 7 cut(s) 35, 66, 358, 572, 1653, 2009, 2184
BlpI GCTNAGC 1 cut(s) 1550
BlsI GCNGC 7 cut(s) 36, 67, 359, 573, 1654, 2010, 2185
BmcAI AGTACT 1 cut(s) 1923
Bme1390I CCNGG 5 cut(s) 546, 1894, 1976, 2237, 2372
Bme18I GGWCC 5 cut(s) 271, 289, 299, 490, 1586
BmgBI CACGTC 2 cut(s) 1571, 2419
BmgT120I GGNCC 6 cut(s) 271, 289, 299, 490, 824, 1586
BmiI GGNNCC 6 cut(s) 759, 1588, 1891, 2369, 2376, 2760
BmrFI CCNGG 5 cut(s) 546, 1894, 1976, 2237, 2372
BmrI ACTGGG 2 cut(s) 518, 821
BmsI GCATC 2 cut(s) 99, 2732
BmuI ACTGGG 2 cut(s) 518, 821
BpiI GAAGAC 2 cut(s) 1318, 1796
Bpu10I CCTNAGC 1 cut(s) 1998
Bpu1102I GCTNAGC 1 cut(s) 1550
BpuEI CTTGAG 2 cut(s) 963, 2331
BpuMI CCSGG 3 cut(s) 546, 1894, 2237
BsaBI GATNNNNATC 1 cut(s) 1506
BsaI GGTCTC 1 cut(s) 2306
BsaJI CCNNGG 2 cut(s) 1893, 2176
Bsc4I CCNNNNNNNGG 8 cut(s) 152, 461, 1423, 1583, 1780, 2564, 2654, 2768
Bse118I RCCGGY 1 cut(s) 842
Bse1I ACTGG 5 cut(s) 244, 524, 682, 827, 2199
Bse3DI GCAATG 1 cut(s) 2619
Bse8I GATNNNNATC 1 cut(s) 1506
BseBI CCWGG 2 cut(s) 1976, 2372
BseDI CCNNGG 2 cut(s) 1893, 2176
BseGI GGATG 6 cut(s) 519, 1303, 1392, 2160, 2245, 2723
BseJI GATNNNNATC 1 cut(s) 1506
BseLI CCNNNNNNNGG 8 cut(s) 152, 461, 1423, 1583, 1780, 2564, 2654, 2768
BseMI GCAATG 1 cut(s) 2619
BseMII CTCAG 8 cut(s) 153, 360, 428, 615, 1359, 1823, 1989, 2397
BseNI ACTGG 5 cut(s) 244, 524, 682, 827, 2199
BseRI GAGGAG 2 cut(s) 1735, 2173
BseSI GKGCMC 2 cut(s) 651, 1303
BseXI GCAGC 7 cut(s) 21, 77, 344, 583, 1664, 1995, 2195
BseYI CCCAGC 1 cut(s) 233
BsgI GTGCAG 2 cut(s) 157, 1671
BshFI GGCC 6 cut(s) 825, 1187, 1637, 2198, 2467, 2647
BshNI GGYRCC 2 cut(s) 757, 2367
BsiHKAI GWGCWC 3 cut(s) 651, 1303, 1771
BsiSI CCGG 5 cut(s) 545, 843, 1893, 2236, 2709
BslFI GGGAC 4 cut(s) 134, 981, 1557, 2371
BslI CCNNNNNNNGG 8 cut(s) 152, 461, 1423, 1583, 1780, 2564, 2654, 2768
BsmAI GTCTC 4 cut(s) 257, 582, 2155, 2306
BsmFI GGGAC 4 cut(s) 134, 981, 1557, 2371
BsmI GAATGC 1 cut(s) 184
BsnI GGCC 6 cut(s) 825, 1187, 1637, 2198, 2467, 2647
Bso31I GGTCTC 1 cut(s) 2306
Bsp1286I GDGCHC 4 cut(s) 140, 651, 1303, 1771
Bsp1407I TGTACA 2 cut(s) 706, 2532
Bsp1720I GCTNAGC 1 cut(s) 1550
BspACI CCGC 4 cut(s) 452, 606, 754, 2769
BspANI GGCC 6 cut(s) 825, 1187, 1637, 2198, 2467, 2647
BspCNI CTCAG 8 cut(s) 152, 361, 429, 614, 1358, 1822, 1990, 2398
BspHI TCATGA 1 cut(s) 2206
BspLI GGNNCC 6 cut(s) 759, 1588, 1891, 2369, 2376, 2760
BspMAI CTGCAG 1 cut(s) 362
BspMI ACCTGC 2 cut(s) 2547, 2726
BspQI GCTCTTC 1 cut(s) 2405
BspT107I GGYRCC 2 cut(s) 757, 2367
BspTI CTTAAG 1 cut(s) 1847
BspTNI GGTCTC 1 cut(s) 2306
BsrDI GCAATG 1 cut(s) 2619
BsrFI RCCGGY 1 cut(s) 842
BsrGI TGTACA 2 cut(s) 706, 2532
BsrI ACTGG 5 cut(s) 244, 524, 682, 827, 2199
BssAI RCCGGY 1 cut(s) 842
BssECI CCNNGG 2 cut(s) 1893, 2176
BssNAI GTATAC 1 cut(s) 2086
BssT1I CCWWGG 1 cut(s) 2176
Bst1107I GTATAC 1 cut(s) 2086
Bst2UI CCWGG 2 cut(s) 1976, 2372
Bst4CI ACNGT 7 cut(s) 724, 793, 798, 1012, 1247, 1315, 2400
Bst6I CTCTTC 1 cut(s) 2405
BstAFI CTTAAG 1 cut(s) 1847
BstAPI GCANNNNNTGC 1 cut(s) 2288
BstAUI TGTACA 2 cut(s) 706, 2532
BstC8I GCNNGC 5 cut(s) 114, 208, 355, 1782, 2214
BstF5I GGATG 6 cut(s) 519, 1303, 1392, 2160, 2245, 2723
BstHHI GCGC 4 cut(s) 571, 729, 1252, 2183
BstMAI GTCTC 4 cut(s) 257, 582, 2155, 2306
BstMWI GCNNNNNNNGC 6 cut(s) 71, 451, 2180, 2288, 2473, 2720
BstNI CCWGG 2 cut(s) 1976, 2372
BstNSI RCATGY 1 cut(s) 2216
BstSCI CCNGG 5 cut(s) 544, 1892, 1974, 2235, 2370
BstSFI CTRYAG 5 cut(s) 358, 387, 1261, 2764, 2804
BstSLI GKGCMC 2 cut(s) 651, 1303
BstV1I GCAGC 7 cut(s) 21, 77, 344, 583, 1664, 1995, 2195
BstV2I GAAGAC 2 cut(s) 1318, 1796
BstX2I RGATCY 6 cut(s) 142, 418, 684, 1383, 2374, 2758
BstXI CCANNNNNNTGG 1 cut(s) 2314
BstYI RGATCY 6 cut(s) 142, 418, 684, 1383, 2374, 2758
BstZ17I GTATAC 1 cut(s) 2086
BsuI GTATCC 1 cut(s) 509
BsuRI GGCC 6 cut(s) 825, 1187, 1637, 2198, 2467, 2647
BtrI CACGTC 2 cut(s) 1571, 2419
BtsCI GGATG 6 cut(s) 519, 1303, 1392, 2160, 2245, 2723
BtsIMutI CAGTG 2 cut(s) 729, 1017
BveI ACCTGC 2 cut(s) 2547, 2726
Cac8I GCNNGC 5 cut(s) 114, 208, 355, 1782, 2214
CaiI CAGNNNCTG 1 cut(s) 715
CciI TCATGA 1 cut(s) 2206
CfoI GCGC 4 cut(s) 571, 729, 1252, 2183
Cfr10I RCCGGY 1 cut(s) 842
Cfr13I GGNCC 6 cut(s) 271, 289, 299, 490, 824, 1586
CseI GACGC 1 cut(s) 721
DraI TTTAAA 2 cut(s) 1840, 2277
DraIII CACNNNGTG 1 cut(s) 1124
EaeI YGGCCR 1 cut(s) 1185
Eam1104I CTCTTC 1 cut(s) 2405
EarI CTCTTC 1 cut(s) 2405
EciI GGCGGA 2 cut(s) 441, 621
Eco130I CCWWGG 1 cut(s) 2176
Eco147I AGGCCT 2 cut(s) 1637, 2647
Eco24I GRGCYC 1 cut(s) 140
Eco31I GGTCTC 1 cut(s) 2306
Eco32I GATATC 2 cut(s) 241, 1791
Eco47I GGWCC 5 cut(s) 271, 289, 299, 490, 1586
Eco57I CTGAAG 4 cut(s) 119, 947, 1515, 2715
EcoO109I RGGNCCY 1 cut(s) 289
EcoRI GAATTC 2 cut(s) 609, 739
EcoRII CCWGG 2 cut(s) 1974, 2370
EcoRV GATATC 2 cut(s) 241, 1791
EcoT14I CCWWGG 1 cut(s) 2176
EcoT38I GRGCYC 1 cut(s) 140
ErhI CCWWGG 1 cut(s) 2176
FalI AAGNNNNNCTT 4 cut(s) 2160, 2192, 2535, 2567
FaqI GGGAC 4 cut(s) 134, 981, 1557, 2371
FauI CCCGC 1 cut(s) 747
FbaI TGATCA 3 cut(s) 1171, 1501, 2782
FblI GTMKAC 1 cut(s) 2085
Fnu4HI GCNGC 7 cut(s) 35, 66, 358, 572, 1653, 2009, 2184
FokI GGATG 6 cut(s) 506, 1290, 1379, 2167, 2252, 2710
FriOI GRGCYC 1 cut(s) 140
Fsp4HI GCNGC 7 cut(s) 35, 66, 358, 572, 1653, 2009, 2184
GlaI GCGC 4 cut(s) 570, 728, 1251, 2182
GluI GCNGC 7 cut(s) 35, 66, 358, 572, 1653, 2009, 2184
GsaI CCCAGC 1 cut(s) 237
HaeIII GGCC 6 cut(s) 825, 1187, 1637, 2198, 2467, 2647
HapII CCGG 5 cut(s) 545, 843, 1893, 2236, 2709
HgaI GACGC 1 cut(s) 721
HhaI GCGC 4 cut(s) 571, 729, 1252, 2183
Hin6I GCGC 4 cut(s) 569, 727, 1250, 2181
HinP1I GCGC 4 cut(s) 569, 727, 1250, 2181
HincII GTYRAC 2 cut(s) 45, 2403
HindII GTYRAC 2 cut(s) 45, 2403
HindIII AAGCTT 1 cut(s) 1527
HpaI GTTAAC 1 cut(s) 45
HpaII CCGG 5 cut(s) 545, 843, 1893, 2236, 2709
HphI GGTGA 4 cut(s) 476, 730, 1466, 2677
Hpy166II GTNNAC 6 cut(s) 45, 340, 649, 1301, 2086, 2403
Hpy8I GTNNAC 6 cut(s) 45, 340, 649, 1301, 2086, 2403
Hpy99I CGWCG 1 cut(s) 2420
HpyAV CCTTC 9 cut(s) 465, 699, 771, 1427, 1600, 1973, 2322, 2457, 2637
HpyCH4III ACNGT 7 cut(s) 724, 793, 798, 1012, 1247, 1315, 2400
HpyCH4IV ACGT 2 cut(s) 1570, 2418
HpyF10VI GCNNNNNNNGC 6 cut(s) 71, 451, 2180, 2288, 2473, 2720
HpySE526I ACGT 2 cut(s) 1570, 2418
HspAI GCGC 4 cut(s) 569, 727, 1250, 2181
KpnI GGTACC 1 cut(s) 2371
Ksp22I TGATCA 3 cut(s) 1171, 1501, 2782
KspAI GTTAAC 1 cut(s) 45
LguI GCTCTTC 1 cut(s) 2405
LmnI GCTCC 5 cut(s) 1761, 1820, 2062, 2446, 2711
Lsp1109I GCAGC 7 cut(s) 21, 77, 344, 583, 1664, 1995, 2195
LweI GCATC 2 cut(s) 99, 2732
MaeII ACGT 2 cut(s) 1570, 2418
MaeIII GTNAC 7 cut(s) 187, 538, 558, 718, 1315, 2105, 2338
MboII GAAGA 8 cut(s) 112, 412, 1200, 1318, 1444, 1796, 2195, 2422
MfeI CAATTG 2 cut(s) 315, 459
MflI RGATCY 6 cut(s) 142, 418, 684, 1383, 2374, 2758
MhlI GDGCHC 4 cut(s) 140, 651, 1303, 1771
MlsI TGGCCA 1 cut(s) 1187
MluNI TGGCCA 1 cut(s) 1187
MlyI GAGTC 4 cut(s) 259, 902, 1555, 2386
MmeI TCCRAC 5 cut(s) 332, 1158, 1735, 1952, 2424
Mox20I TGGCCA 1 cut(s) 1187
MroXI GAANNNNTTC 1 cut(s) 1276
MscI TGGCCA 1 cut(s) 1187
MslI CAYNNNNRTG 2 cut(s) 2211, 2238
Msp20I TGGCCA 1 cut(s) 1187
MspA1I CMGCKG 1 cut(s) 2769
MspCI CTTAAG 1 cut(s) 1847
MspI CCGG 5 cut(s) 545, 843, 1893, 2236, 2709
MspR9I CCNGG 5 cut(s) 546, 1894, 1976, 2237, 2372
MunI CAATTG 2 cut(s) 315, 459
Mva1269I GAATGC 1 cut(s) 184
MvaI CCWGG 2 cut(s) 1976, 2372
MwoI GCNNNNNNNGC 6 cut(s) 71, 451, 2180, 2288, 2473, 2720
NciI CCSGG 3 cut(s) 546, 1894, 2237
NlaIV GGNNCC 6 cut(s) 759, 1588, 1891, 2369, 2376, 2760
NmuCI GTSAC 2 cut(s) 718, 2338
NspI RCATGY 1 cut(s) 2216
PaeI GCATGC 1 cut(s) 2216
PagI TCATGA 1 cut(s) 2206
PceI AGGCCT 2 cut(s) 1637, 2647
PciSI GCTCTTC 1 cut(s) 2405
PctI GAATGC 1 cut(s) 184
PdmI GAANNNNTTC 1 cut(s) 1276
PfeI GAWTC 8 cut(s) 103, 403, 850, 1130, 1217, 1427, 1967, 2032
PfoI TCCNGGA 1 cut(s) 1974
PkrI GCNGC 7 cut(s) 36, 67, 359, 573, 1654, 2010, 2185
PleI GAGTC 4 cut(s) 259, 901, 1555, 2386
PpsI GAGTC 4 cut(s) 259, 901, 1555, 2386
PpuMI RGGWCCY 1 cut(s) 289
PshBI ATTAAT 1 cut(s) 941
Psp5II RGGWCCY 1 cut(s) 289
Psp6I CCWGG 2 cut(s) 1974, 2370
PspFI CCCAGC 1 cut(s) 233
PspGI CCWGG 2 cut(s) 1974, 2370
PspN4I GGNNCC 6 cut(s) 759, 1588, 1891, 2369, 2376, 2760
PspPI GGNCC 6 cut(s) 271, 289, 299, 490, 824, 1586
PspPPI RGGWCCY 1 cut(s) 289
PstI CTGCAG 1 cut(s) 362
PstNI CAGNNNCTG 1 cut(s) 715
PsuI RGATCY 6 cut(s) 142, 418, 684, 1383, 2374, 2758
RseI CAYNNNNRTG 2 cut(s) 2211, 2238
SapI GCTCTTC 1 cut(s) 2405
SatI GCNGC 7 cut(s) 35, 66, 358, 572, 1653, 2009, 2184
Sau96I GGNCC 6 cut(s) 271, 289, 299, 490, 824, 1586
ScaI AGTACT 1 cut(s) 1923
SchI GAGTC 4 cut(s) 259, 902, 1555, 2386
ScrFI CCNGG 5 cut(s) 546, 1894, 1976, 2237, 2372
SduI GDGCHC 4 cut(s) 140, 651, 1303, 1771
SfaNI GCATC 2 cut(s) 99, 2732
SfcI CTRYAG 5 cut(s) 358, 387, 1261, 2764, 2804
SinI GGWCC 5 cut(s) 271, 289, 299, 490, 1586
SmiI ATTTAAAT 1 cut(s) 2277
SmiMI CAYNNNNRTG 2 cut(s) 2211, 2238
SmlI CTYRAG 3 cut(s) 978, 1847, 2346
SmoI CTYRAG 3 cut(s) 978, 1847, 2346
SpeI ACTAGT 1 cut(s) 334
SphI GCATGC 1 cut(s) 2216
SseBI AGGCCT 2 cut(s) 1637, 2647
SsiI CCGC 4 cut(s) 452, 606, 754, 2769
SspI AATATT 2 cut(s) 201, 2384
StuI AGGCCT 2 cut(s) 1637, 2647
StyD4I CCNGG 5 cut(s) 544, 1892, 1974, 2235, 2370
StyI CCWWGG 1 cut(s) 2176
SwaI ATTTAAAT 1 cut(s) 2277
TaaI ACNGT 7 cut(s) 724, 793, 798, 1012, 1247, 1315, 2400
TaiI ACGT 2 cut(s) 1573, 2421
TaqI TCGA 4 cut(s) 7, 194, 1455, 2604
TaqII GACCGA 1 cut(s) 1395
TatI WGTACW 5 cut(s) 706, 793, 798, 1921, 2532
TfiI GAWTC 8 cut(s) 103, 403, 850, 1130, 1217, 1427, 1967, 2032
TscAI CASTG 2 cut(s) 729, 1017
TseFI GTSAC 2 cut(s) 718, 2338
TseI GCWGC 7 cut(s) 34, 65, 357, 571, 1652, 2008, 2183
Tsp45I GTSAC 2 cut(s) 718, 2338
TspDTI ATGAA 6 cut(s) 569, 732, 863, 1200, 2085, 2195
TspGWI ACGGA 1 cut(s) 1774
TspRI CASTG 2 cut(s) 729, 1017
Vha464I CTTAAG 1 cut(s) 1847
VneI GTGCAC 2 cut(s) 647, 1299
VpaK11BI GGWCC 5 cut(s) 271, 289, 299, 490, 1586
VspI ATTAAT 1 cut(s) 941
XapI RAATTY 6 cut(s) 50, 447, 609, 739, 2547, 2716
XbaI TCTAGA 1 cut(s) 415
XceI RCATGY 1 cut(s) 2216
XmiI GTMKAC 1 cut(s) 2085
XmnI GAANNNNTTC 1 cut(s) 1276
ZrmI AGTACT 1 cut(s) 1923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.