pycom11g17930

Leucine-rich repeat receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
20222179 .. 20223973
1795 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g17930.1

Sequence Viewer

Length: 1053 bp
ATGGTTCTGCTACATGTGGTTTTTGACCGAAATAATCTAACTGGTGCCATTCCTTACACACTCGGACTTGTGCAGACACTGCAGGCGGTGCACTTGTCCAACAATCAGCTGACTGGCCCCATGCCAAACCTTACTAGCTTGAATGGCCTGAACTATGTGGATATGAGCAACAATACTTTTGCTGCAACAGATGTTCCTACTTGGTTTTCGACATTGCAGAATTTGACAACATTTGAATGCTCTGAATTAATGTACCTGTCAATCCTGTATGGCAGAATGATGGAGAACACGGGACTTCAGGGAGAAGTTCCTCCGGCCTTATTCAGCCTTTCCAGTTTGGAGACTGTGTTACTGAGGAACAACAAAATCAACGGTTTATTGGATCTTGGAACCATTTCTAGCAACCGTTTTCAACGAATTGATCTGGAGAAGAACTTCATTACCGACCTTACACGAAGTGATGGAGGATCCAACTATACATTGATCCTCGTTGATAATCCAATTTGTGAGGGAACAAGCATGGCAAATAACAACTGCACTGTTTCTCCAACCAGTTCCCCAATTTCGCCGCCACCAAGTAACTGTACGCAAGTTGCTTGTAGTCCGGGGCAGGTTTCTTCCCCCAACTGTAAATGTGCATATCCCTACACAGGAACTCTAAACTTCATATTTGTTTCTTTCTCCAACTTGGGAGACTTCAGTTATTTTACAGCTCTTCAGGATTCTCTCCTAAAAACCCTTCAGTCCTATAACCTTCCTGTGGATTCAGTTGCTCTTAGTAATCCTTCCTGGGACTCCTCTTATCACCTTAAACTCTACATAGTAATCTTCCCAGCTGGCCAAGACCGATTCAACAAAACTGGATCTTCAGCCATTGCGTCCCTGATTAGCAACCAGACTCTGGCGGGTGCGCGTCCAAGTTATTATGGACCCTTCTCTTGTTTTTTCCCTTATGACAACCCGAAATCAGGAGGTAAGTCTGAAAGTCACTCTGAACTTAGAAATACTAGTTGCACTTCTGCTTTAAAAGTTGGCAATGTTAACTCGATCTGA

Protein Analysis

351

Amino Acids

38.03

Weight (kDa)

5.33

Isoelectric Point (pI)

46.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 601
AccB1I GGYRCC 1 cut(s) 44
AccB7I CCANNNNNTGG 1 cut(s) 901
AccII CGCG 1 cut(s) 913
AciI CCGC 3 cut(s) 86, 569, 905
AclWI GGATC 5 cut(s) 390, 462, 475, 478, 871
AcoI YGGCCR 1 cut(s) 838
AcsI RAATTY 1 cut(s) 220
AcuI CTGAAG 5 cut(s) 281, 682, 701, 725, 852
AdeI CACNNNGTG 1 cut(s) 458
AfaI GTAC 2 cut(s) 254, 586
AfiI CCNNNNNNNGG 4 cut(s) 650, 760, 901, 968
AflIII ACRYGT 1 cut(s) 13
AgsI TTSAA 4 cut(s) 142, 236, 413, 853
AhlI ACTAGT 1 cut(s) 1007
AjnI CCWGG 1 cut(s) 788
AluBI AGCT 4 cut(s) 109, 138, 713, 836
AluI AGCT 4 cut(s) 109, 138, 713, 836
Alw21I GWGCWC 1 cut(s) 93
Alw26I GTCTC 2 cut(s) 335, 687
Alw44I GTGCAC 1 cut(s) 89
AlwI GGATC 5 cut(s) 390, 462, 475, 478, 871
AlwNI CAGNNNCTG 2 cut(s) 79, 901
AoxI GGCC 4 cut(s) 115, 145, 315, 838
ApaLI GTGCAC 1 cut(s) 89
ApeKI GCWGC 1 cut(s) 182
ApoI RAATTY 1 cut(s) 220
AseI ATTAAT 1 cut(s) 248
Asp700I GAANNNNTTC 2 cut(s) 394, 434
AspLEI GCGC 1 cut(s) 913
AspS9I GGNCC 2 cut(s) 116, 929
AsuC2I CCSGG 1 cut(s) 606
AsuHPI GGTGA 1 cut(s) 797
AvaII GGWCC 1 cut(s) 929
BaeGI GKGCMC 1 cut(s) 93
BalI TGGCCA 1 cut(s) 840
BamHI GGATCC 1 cut(s) 467
BanI GGYRCC 1 cut(s) 44
Bbv12I GWGCWC 1 cut(s) 93
BbvI GCAGC 1 cut(s) 169
BccI CCATC 2 cut(s) 274, 455
BciT130I CCWGG 1 cut(s) 790
BcnI CCSGG 1 cut(s) 606
BcoDI GTCTC 2 cut(s) 335, 687
BcuI ACTAGT 1 cut(s) 1007
BfaI CTAG 3 cut(s) 135, 399, 1008
BfmI CTRYAG 1 cut(s) 80
BfuAI ACCTGC 1 cut(s) 601
BisI GCNGC 2 cut(s) 183, 569
BlsI GCNGC 2 cut(s) 184, 570
Bme1390I CCNGG 2 cut(s) 606, 790
Bme18I GGWCC 1 cut(s) 929
BmgT120I GGNCC 2 cut(s) 116, 929
BmiI GGNNCC 5 cut(s) 46, 118, 391, 469, 931
BmrFI CCNGG 2 cut(s) 606, 790
BpmI CTGGAG 1 cut(s) 446
BpuMI CCSGG 1 cut(s) 606
BsaJI CCNNGG 2 cut(s) 605, 789
BsaXI ACNNNNNCTCC 4 cut(s) 332, 362, 529, 559
Bsc4I CCNNNNNNNGG 4 cut(s) 650, 760, 901, 968
Bse1I ACTGG 5 cut(s) 46, 118, 333, 552, 865
Bse3DI GCAATG 3 cut(s) 212, 873, 1042
BseBI CCWGG 1 cut(s) 790
BseDI CCNNGG 2 cut(s) 605, 789
BseLI CCNNNNNNNGG 4 cut(s) 650, 760, 901, 968
BseMI GCAATG 3 cut(s) 212, 873, 1042
BseMII CTCAG 1 cut(s) 344
BseNI ACTGG 5 cut(s) 46, 118, 333, 552, 865
BseRI GAGGAG 1 cut(s) 787
BseSI GKGCMC 1 cut(s) 93
BseXI GCAGC 1 cut(s) 169
BseYI CCCAGC 1 cut(s) 832
BsgI GTGCAG 2 cut(s) 92, 520
Bsh1236I CGCG 1 cut(s) 913
BshFI GGCC 4 cut(s) 117, 147, 317, 840
BshNI GGYRCC 1 cut(s) 44
BsiHKAI GWGCWC 1 cut(s) 93
BsiSI CCGG 2 cut(s) 314, 605
BslFI GGGAC 3 cut(s) 306, 806, 865
BslI CCNNNNNNNGG 4 cut(s) 650, 760, 901, 968
BsmAI GTCTC 2 cut(s) 335, 687
BsmFI GGGAC 3 cut(s) 306, 806, 865
BsmI GAATGC 1 cut(s) 242
BsnI GGCC 4 cut(s) 117, 147, 317, 840
Bsp1286I GDGCHC 1 cut(s) 93
Bsp143I GATC 6 cut(s) 382, 421, 467, 483, 863, 1047
BspACI CCGC 3 cut(s) 86, 569, 905
BspANI GGCC 4 cut(s) 117, 147, 317, 840
BspCNI CTCAG 1 cut(s) 345
BspFNI CGCG 1 cut(s) 913
BspLI GGNNCC 5 cut(s) 46, 118, 391, 469, 931
BspMAI CTGCAG 1 cut(s) 84
BspMI ACCTGC 1 cut(s) 601
BspPI GGATC 5 cut(s) 390, 462, 475, 478, 871
BspQI GCTCTTC 1 cut(s) 720
BspT107I GGYRCC 1 cut(s) 44
BsrDI GCAATG 3 cut(s) 212, 873, 1042
BsrI ACTGG 5 cut(s) 46, 118, 333, 552, 865
BssECI CCNNGG 2 cut(s) 605, 789
BssMI GATC 6 cut(s) 382, 421, 467, 483, 863, 1047
Bst2UI CCWGG 1 cut(s) 790
Bst4CI ACNGT 6 cut(s) 346, 374, 407, 541, 584, 629
Bst6I CTCTTC 1 cut(s) 720
BstAPI GCANNNNNTGC 2 cut(s) 79, 88
BstC8I GCNNGC 2 cut(s) 84, 838
BstDEI CTNAG 3 cut(s) 353, 776, 998
BstFNI CGCG 1 cut(s) 913
BstHHI GCGC 1 cut(s) 913
BstKTI GATC 6 cut(s) 385, 424, 470, 486, 866, 1050
BstMAI GTCTC 2 cut(s) 335, 687
BstMBI GATC 6 cut(s) 382, 421, 467, 483, 863, 1047
BstMWI GCNNNNNNNGC 3 cut(s) 79, 88, 144
BstNI CCWGG 1 cut(s) 790
BstNSI RCATGY 1 cut(s) 17
BstSCI CCNGG 2 cut(s) 604, 788
BstSFI CTRYAG 1 cut(s) 80
BstSLI GKGCMC 1 cut(s) 93
BstUI CGCG 1 cut(s) 913
BstV1I GCAGC 1 cut(s) 169
BstX2I RGATCY 3 cut(s) 382, 467, 863
BstYI RGATCY 3 cut(s) 382, 467, 863
BsuRI GGCC 4 cut(s) 117, 147, 317, 840
BtsI GCAGTG 1 cut(s) 77
BtsIMutI CAGTG 2 cut(s) 77, 537
BveI ACCTGC 1 cut(s) 601
Cac8I GCNNGC 2 cut(s) 84, 838
CaiI CAGNNNCTG 2 cut(s) 79, 901
CfoI GCGC 1 cut(s) 913
Cfr13I GGNCC 2 cut(s) 116, 929
CseI GACGC 2 cut(s) 867, 902
Csp6I GTAC 2 cut(s) 253, 585
CviAII CATG 3 cut(s) 14, 121, 520
CviQI GTAC 2 cut(s) 253, 585
DdeI CTNAG 3 cut(s) 353, 776, 998
DpnI GATC 6 cut(s) 384, 423, 469, 485, 865, 1049
DpnII GATC 6 cut(s) 382, 421, 467, 483, 863, 1047
DraI TTTAAA 1 cut(s) 1026
DraIII CACNNNGTG 1 cut(s) 458
EaeI YGGCCR 1 cut(s) 838
Eam1104I CTCTTC 1 cut(s) 720
EarI CTCTTC 1 cut(s) 720
Eco47I GGWCC 1 cut(s) 929
Eco57I CTGAAG 5 cut(s) 281, 682, 701, 725, 852
EcoRII CCWGG 1 cut(s) 788
FaeI CATG 3 cut(s) 17, 124, 523
FaqI GGGAC 3 cut(s) 306, 806, 865
FatI CATG 3 cut(s) 13, 120, 519
FauI CCCGC 1 cut(s) 898
Fnu4HI GCNGC 2 cut(s) 183, 569
Fsp4HI GCNGC 2 cut(s) 183, 569
FspBI CTAG 3 cut(s) 135, 399, 1008
GlaI GCGC 1 cut(s) 912
GluI GCNGC 2 cut(s) 183, 569
GsaI CCCAGC 1 cut(s) 836
GsuI CTGGAG 1 cut(s) 446
HaeIII GGCC 4 cut(s) 117, 147, 317, 840
HapII CCGG 2 cut(s) 314, 605
HgaI GACGC 2 cut(s) 867, 902
HhaI GCGC 1 cut(s) 913
Hin1II CATG 3 cut(s) 17, 124, 523
Hin6I GCGC 1 cut(s) 911
HinP1I GCGC 1 cut(s) 911
HincII GTYRAC 1 cut(s) 1042
HindII GTYRAC 1 cut(s) 1042
HinfI GANTC 5 cut(s) 722, 764, 794, 849, 898
HpaI GTTAAC 1 cut(s) 1042
HpaII CCGG 2 cut(s) 314, 605
HphI GGTGA 1 cut(s) 797
Hpy166II GTNNAC 2 cut(s) 91, 1042
Hpy188I TCNGA 5 cut(s) 65, 244, 982, 994, 1052
Hpy188III TCNNGA 3 cut(s) 425, 719, 969
Hpy8I GTNNAC 2 cut(s) 91, 1042
HpyAV CCTTC 4 cut(s) 749, 764, 795, 943
HpyCH4III ACNGT 6 cut(s) 346, 374, 407, 541, 584, 629
HpyCH4V TGCA 8 cut(s) 73, 82, 91, 185, 217, 537, 638, 1014
HpyF10VI GCNNNNNNNGC 3 cut(s) 79, 88, 144
HpyF3I CTNAG 3 cut(s) 353, 776, 998
Hsp92II CATG 3 cut(s) 17, 124, 523
HspAI GCGC 1 cut(s) 911
KspAI GTTAAC 1 cut(s) 1042
Kzo9I GATC 6 cut(s) 382, 421, 467, 483, 863, 1047
LguI GCTCTTC 1 cut(s) 720
Lsp1109I GCAGC 1 cut(s) 169
MaeI CTAG 3 cut(s) 135, 399, 1008
MaeIII GTNAC 3 cut(s) 348, 578, 986
MalI GATC 6 cut(s) 384, 423, 469, 485, 865, 1049
MboI GATC 6 cut(s) 382, 421, 467, 483, 863, 1047
MboII GAAGA 5 cut(s) 442, 609, 707, 820, 858
MflI RGATCY 3 cut(s) 382, 467, 863
MhlI GDGCHC 1 cut(s) 93
MlsI TGGCCA 1 cut(s) 840
MluCI AATT 5 cut(s) 220, 245, 417, 501, 561
MluNI TGGCCA 1 cut(s) 840
MlyI GAGTC 2 cut(s) 788, 892
MmeI TCCRAC 4 cut(s) 123, 495, 572, 708
MnlI CCTC 7 cut(s) 321, 348, 458, 497, 502, 808, 965
Mox20I TGGCCA 1 cut(s) 840
MroXI GAANNNNTTC 2 cut(s) 394, 434
MscI TGGCCA 1 cut(s) 840
MseI TTAA 4 cut(s) 248, 810, 1025, 1041
MslI CAYNNNNRTG 1 cut(s) 235
Msp20I TGGCCA 1 cut(s) 840
MspA1I CMGCKG 2 cut(s) 109, 836
MspI CCGG 2 cut(s) 314, 605
MspR9I CCNGG 2 cut(s) 606, 790
Mva1269I GAATGC 1 cut(s) 242
MvaI CCWGG 1 cut(s) 790
MvnI CGCG 1 cut(s) 913
MwoI GCNNNNNNNGC 3 cut(s) 79, 88, 144
NciI CCSGG 1 cut(s) 606
NdeII GATC 6 cut(s) 382, 421, 467, 483, 863, 1047
NlaIII CATG 3 cut(s) 17, 124, 523
NlaIV GGNNCC 5 cut(s) 46, 118, 391, 469, 931
NmuCI GTSAC 1 cut(s) 986
NspI RCATGY 1 cut(s) 17
PciI ACATGT 1 cut(s) 13
PciSI GCTCTTC 1 cut(s) 720
PctI GAATGC 1 cut(s) 242
PdmI GAANNNNTTC 2 cut(s) 394, 434
PfeI GAWTC 3 cut(s) 722, 764, 849
PflMI CCANNNNNTGG 1 cut(s) 901
PkrI GCNGC 2 cut(s) 184, 570
PleI GAGTC 2 cut(s) 788, 892
PpsI GAGTC 2 cut(s) 788, 892
PscI ACATGT 1 cut(s) 13
PshBI ATTAAT 1 cut(s) 248
Psp6I CCWGG 1 cut(s) 788
PspFI CCCAGC 1 cut(s) 832
PspGI CCWGG 1 cut(s) 788
PspN4I GGNNCC 5 cut(s) 46, 118, 391, 469, 931
PspPI GGNCC 2 cut(s) 116, 929
PstI CTGCAG 1 cut(s) 84
PstNI CAGNNNCTG 2 cut(s) 79, 901
PsuI RGATCY 3 cut(s) 382, 467, 863
PvuII CAGCTG 2 cut(s) 109, 836
RsaI GTAC 2 cut(s) 254, 586
RsaNI GTAC 2 cut(s) 253, 585
RseI CAYNNNNRTG 1 cut(s) 235
SapI GCTCTTC 1 cut(s) 720
SaqAI TTAA 4 cut(s) 248, 810, 1025, 1041
SatI GCNGC 2 cut(s) 183, 569
Sau3AI GATC 6 cut(s) 382, 421, 467, 483, 863, 1047
Sau96I GGNCC 2 cut(s) 116, 929
SchI GAGTC 2 cut(s) 788, 892
ScrFI CCNGG 2 cut(s) 606, 790
SduI GDGCHC 1 cut(s) 93
SfcI CTRYAG 1 cut(s) 80
SinI GGWCC 1 cut(s) 929
SmiMI CAYNNNNRTG 1 cut(s) 235
SpeI ACTAGT 1 cut(s) 1007
Sse9I AATT 5 cut(s) 220, 245, 417, 501, 561
SsiI CCGC 3 cut(s) 86, 569, 905
SspMI CTAG 3 cut(s) 135, 399, 1008
StyD4I CCNGG 2 cut(s) 604, 788
TaaI ACNGT 6 cut(s) 346, 374, 407, 541, 584, 629
TaqI TCGA 2 cut(s) 209, 1046
TaqII GACCGA 2 cut(s) 42, 861
TasI AATT 5 cut(s) 220, 245, 417, 501, 561
TauI GCSGC 1 cut(s) 571
TfiI GAWTC 3 cut(s) 722, 764, 849
Tru1I TTAA 4 cut(s) 248, 810, 1025, 1041
Tru9I TTAA 4 cut(s) 248, 810, 1025, 1041
TscAI CASTG 2 cut(s) 84, 544
TseFI GTSAC 1 cut(s) 986
TseI GCWGC 1 cut(s) 182
Tsp45I GTSAC 1 cut(s) 986
TspDTI ATGAA 2 cut(s) 427, 655
TspRI CASTG 2 cut(s) 84, 544
Van91I CCANNNNNTGG 1 cut(s) 901
VneI GTGCAC 1 cut(s) 89
VpaK11BI GGWCC 1 cut(s) 929
VspI ATTAAT 1 cut(s) 248
XapI RAATTY 1 cut(s) 220
XceI RCATGY 1 cut(s) 17
XmnI GAANNNNTTC 2 cut(s) 394, 434
XspI CTAG 3 cut(s) 135, 399, 1008
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.