RchiOBHm_Chr5g0042381

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000487
Physical Location & Seq
Reverse (-)
37118310 .. 37124061
5752 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32078

Sequence Viewer

Length: 2457 bp
ATGCAAGCGTGGGACATAAGTTGGGTGGGCTCAGATCCTTGTGATGGCTGGAAAGGTATTGACTGCACGAATGCACGTGTTACGTCGATAATATTGGCAGGCATGGGTTTGAGAGGTCAGCTACCCAGCGATATCCAGTTGTTGTCCGAGCTAGAGACTCTAAACCTTGCTGGCTGCAGTTTCTCTGAGCCTATTCCTCACACTATAGGAACTTTGAAGAATCTATATTATCTTCATTTAGGAGACAATCAGCTCTCAGGCGAAATTCCAACTCAACTTTTCAGCTCAAAGATGGTTCTGGTGCACTTGCTCTTGGATAGAAATAATCTAACTGGCGAGATCCCTTCCACACTCGGACTTGTACAGACTCTGGTGACAGTGCGCCTTGATTGGAATTCATTAAGTGGGCTGGTGCCTTCAAGCCTCAACAATCTTTCAAACATGACTGTACTGTACTTGTCTAACAATCAGTTGATTGGCCCAGTACCAAACCTTACCGGCATGAATCCTCTCAACTATGTGGATATGAGTAATAATACTTTTGATGTGTCAGAAGTTCCTGATTGGTTTTCAACCTTGCAGTTCTTGACGACATTAATAATGGAAAACACACGGCTTCAGGGACAAGTTCCTCAAGCCCTATTTGGCTTTTACAATTTGCAGACAGTGGTACTAAGGAACAACAGTCTCAATGGCTTCTTGGATATTGAAACCAATTACGGCAACCAACTGCGACTAATTGATTTGGAAAATAACTCCATTACTAATCTTACACAAAGTGGAGAATCCAACTATACATTGATACTTGTTGGTAATCCAATTTGTAATCAGACAAACATGGCCAAGAATTATTGCATTGTTTCTTCATCAGATTCCTTATACTCAACACCACCAAATAACTGTGCGCCCATTGGCTGTAGTTCGGGAAAAGTATCCAGCCCGAATTGTAAATGTGCACATCCTTACACAGTAACTCTAGTCTTCTTATATGTCAGTTTCTCAGACTTTGGAAACTCAACTTATTACACAGAGCTAGAGATCTCTCTCATCCAATCTTTTCGGACTTACAACATTCCTGTGGATTCAGTTTCTCTGGGTTCTCCTTTCTTCGACTTATTTTATAACTTTCACCTGATCCTAGAGGTTTTCCCATCTGATCAAGATCACTTCAACAAATCAGAAGCTTCAGCACTTGCTTCTGTGCTTAGTAACCAGACTCTCCCACGTCCCCCGTATTTTGGACCCTTCTCTGTTGCATTAAATTATGCTCACTTCGGAGGATCAAACAAGGCCTTGATAATTGGTGCAGCAGTTGGCTGTTCTGTGCTGCTGCTATCAATAGCACTTGTAGGGGTTTATGCTCTCCAACGAAAGAGGAGAGCAAATGATCAACGGAGCAGAGCCCCTTTGCACGCTTGGATATCAAAAAGCAGTCTTCCTCAGTTAAAAGGAGCAAGATTGTTTTCTTTTAAAGAGCTTAAGGATTGCACCAATAGTTTTTCAGAAGCAAATGATATTGGTTCCGGGGGTTATGGAAATGTGTATCAGGGAGTACTTCCAACAGGCGAAATGGTTGCCATTAAACGAGCTAAAAGGGAATCTATCCTGGAAGGGATTGAGTTCAAAGCTGAGGTTGAGCTGCTTTCAAGGGTACATCATAAGAATCTTGTGAGCCTTGTTGGTTTTTGTTTGGAGCAAGATGAACAAATGTTGGTATACGAGTATGTTCCAAATGGTAACTTGATGGATAGTCTTTCAGGGAAGTCAGGATTTAGGTTGAACTGGATGAGAAGACTTAAAGTAGCCCTTGGCGCAGCGAGAGGACTGGCCTATCTTCATGAGCATGCAACCCCATCTATTATACACCGGGATGTTAAACCAAACAATATCCTACTAGATAAAGATTTAAATGCAAAAGTTGCCGATTTTGGTCTCTCCAAGTCTATGGCTGGTAGTGGAAGGGATCACGTGACTACTCAAGTTAAGGGGACAATGGGGTACCTGGATCCTGAATATTATATGACTCAACAGTTGACTGAGAAGAGCGACGTGTATAGCTTTGGCGTGGTAATGTTGGAGCTGATAACTGCTAGAAGGCCAATAGAGCGTGGGAGGTATATTGTGAGAGTGGTACAGATGACAATGGATAGGAAAAAAGATTTGTACAACCTGCAAGAAATTCTTGATCCAGCCATCGGTTTAGTAACACAGCTGAAAGGTTTAGAAATGTTTGTCGATCTGGCAATGTCGTGTGTAAAAGAATTACGAGCTAGAAGGCCTAGAATGGGGGAAGTGGTGAAAGAGATAGAGAACATTATACAGATTGCAAGTTTGAACGCCGGAGCAAATTCAGCATCCACTTCAGCAGGTTATGAGGATGTGAGTAAGGATAGTAGCGAGGATCCCTACAGCGGTCATGTCCTTGATCATAGTCGGGTTTTCAACCTACAAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

818

Amino Acids

90.5

Weight (kDa)

5.94

Isoelectric Point (pI)

36.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 39 - 250 2.3e-09 Leucine-rich repeat region
Pkinase PF00069 501 - 765 8.5e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 504 - 768 6.9e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1122
Acc36I ACCTGC 2 cut(s) 2178, 2357
Acc65I GGTACC 1 cut(s) 1998
AccB1I GGYRCC 2 cut(s) 412, 1998
AccI GTMKAC 1 cut(s) 1716
AciI CCGC 1 cut(s) 2412
AcoI YGGCCR 1 cut(s) 840
AcsI RAATTY 4 cut(s) 264, 394, 2178, 2347
AcuI CTGAAG 3 cut(s) 602, 1170, 2346
AcvI CACGTG 2 cut(s) 77, 1969
AdeI CACNNNGTG 1 cut(s) 779
AfiI CCNNNNNNNGG 5 cut(s) 44, 1238, 2195, 2285, 2411
AflII CTTAAG 1 cut(s) 1478
AflIII ACRYGT 2 cut(s) 76, 2049
AjiI CACGTC 2 cut(s) 1226, 2050
AjnI CCWGG 2 cut(s) 1605, 2001
Alw21I GWGCWC 2 cut(s) 306, 958
Alw26I GTCTC 4 cut(s) 149, 237, 692, 1937
Alw44I GTGCAC 2 cut(s) 302, 954
AlwNI CAGNNNCTG 1 cut(s) 370
AoxI GGCC 6 cut(s) 478, 840, 1290, 1827, 2096, 2276
ApaLI GTGCAC 2 cut(s) 302, 954
ApeKI GCWGC 6 cut(s) 174, 1307, 1327, 1330, 1639, 1814
ApoI RAATTY 4 cut(s) 264, 394, 2178, 2347
AseI ATTAAT 1 cut(s) 596
Asp718I GGTACC 1 cut(s) 1998
AspLEI GCGC 3 cut(s) 384, 907, 1814
AspS9I GGNCC 2 cut(s) 479, 1241
AsuC2I CCSGG 2 cut(s) 1525, 1868
AsuHPI GGTGA 3 cut(s) 385, 1121, 2308
AvaII GGWCC 1 cut(s) 1241
BaeGI GKGCMC 2 cut(s) 306, 958
BalI TGGCCA 1 cut(s) 842
BamHI GGATCC 2 cut(s) 2005, 2401
BanI GGYRCC 2 cut(s) 412, 1998
BanII GRGCYC 2 cut(s) 32, 1405
BbrPI CACGTG 2 cut(s) 77, 1969
BbsI GAAGAC 3 cut(s) 973, 1427, 1798
Bbv12I GWGCWC 2 cut(s) 306, 958
BbvCI CCTCAGC 1 cut(s) 1629
BbvI GCAGC 6 cut(s) 161, 1314, 1317, 1319, 1626, 1826
BccI CCATC 6 cut(s) 38, 286, 1159, 1738, 1861, 2201
BceAI ACGGC 2 cut(s) 629, 736
BcgI CGANNNNNNTGC 2 cut(s) 1556, 1590
BciT130I CCWGG 2 cut(s) 1607, 2003
BciVI GTATCC 1 cut(s) 943
BclI TGATCA 3 cut(s) 1156, 1387, 2425
BcnI CCSGG 2 cut(s) 1525, 1868
BcoDI GTCTC 4 cut(s) 149, 237, 692, 1937
BfaI CTAG 8 cut(s) 152, 977, 1034, 1139, 1895, 2091, 2271, 2280
BfmI CTRYAG 4 cut(s) 175, 204, 916, 2407
BfrI CTTAAG 1 cut(s) 1478
BfuAI ACCTGC 2 cut(s) 2178, 2357
BfuI GTATCC 1 cut(s) 943
BglII AGATCT 1 cut(s) 1038
BisI GCNGC 6 cut(s) 175, 1308, 1328, 1331, 1640, 1815
BlsI GCNGC 6 cut(s) 176, 1309, 1329, 1332, 1641, 1816
BmcAI AGTACT 1 cut(s) 1554
Bme1390I CCNGG 4 cut(s) 1525, 1607, 1868, 2003
Bme18I GGWCC 1 cut(s) 1241
BmgBI CACGTC 2 cut(s) 1226, 2050
BmgT120I GGNCC 2 cut(s) 479, 1241
BmiI GGNNCC 6 cut(s) 414, 1243, 1522, 2000, 2007, 2403
BmrFI CCNGG 4 cut(s) 1525, 1607, 1868, 2003
BmrI ACTGGG 1 cut(s) 476
BmsI GCATC 1 cut(s) 2363
BmuI ACTGGG 1 cut(s) 476
BpiI GAAGAC 3 cut(s) 973, 1427, 1798
Bpu10I CCTNAGC 1 cut(s) 1629
BpuEI CTTGAG 2 cut(s) 618, 1962
BpuMI CCSGG 2 cut(s) 1525, 1868
BsaAI YACGTR 2 cut(s) 77, 1969
BsaBI GATNNNNATC 1 cut(s) 1161
BsaI GGTCTC 1 cut(s) 1937
BsaJI CCNNGG 2 cut(s) 1524, 1807
Bsc4I CCNNNNNNNGG 5 cut(s) 44, 1238, 2195, 2285, 2411
Bse118I RCCGGY 1 cut(s) 497
Bse1I ACTGG 5 cut(s) 136, 337, 482, 1787, 1830
Bse3DI GCAATG 1 cut(s) 2250
Bse8I GATNNNNATC 1 cut(s) 1161
BseBI CCWGG 2 cut(s) 1607, 2003
BseDI CCNNGG 2 cut(s) 1524, 1807
BseGI GGATG 6 cut(s) 958, 1047, 1791, 1876, 2354, 2383
BseJI GATNNNNATC 1 cut(s) 1161
BseLI CCNNNNNNNGG 5 cut(s) 44, 1238, 2195, 2285, 2411
BseMI GCAATG 1 cut(s) 2250
BseMII CTCAG 7 cut(s) 45, 177, 270, 1014, 1454, 1620, 2028
BseNI ACTGG 5 cut(s) 136, 337, 482, 1787, 1830
BseRI GAGGAG 1 cut(s) 1390
BseSI GKGCMC 2 cut(s) 306, 958
BseXI GCAGC 6 cut(s) 161, 1314, 1317, 1319, 1626, 1826
BseYI CCCAGC 1 cut(s) 125
BsgI GTGCAG 2 cut(s) 49, 1326
BshFI GGCC 6 cut(s) 480, 842, 1292, 1829, 2098, 2278
BshNI GGYRCC 2 cut(s) 412, 1998
BsiHKAI GWGCWC 2 cut(s) 306, 958
BsiSI CCGG 4 cut(s) 498, 1524, 1867, 2340
BslFI GGGAC 4 cut(s) 26, 636, 1212, 2002
BslI CCNNNNNNNGG 5 cut(s) 44, 1238, 2195, 2285, 2411
BsmAI GTCTC 4 cut(s) 149, 237, 692, 1937
BsmFI GGGAC 4 cut(s) 26, 636, 1212, 2002
BsmI GAATGC 1 cut(s) 76
BsnI GGCC 6 cut(s) 480, 842, 1292, 1829, 2098, 2278
Bso31I GGTCTC 1 cut(s) 1937
Bsp1286I GDGCHC 4 cut(s) 32, 306, 958, 1405
Bsp1407I TGTACA 2 cut(s) 361, 2163
BspACI CCGC 1 cut(s) 2412
BspANI GGCC 6 cut(s) 480, 842, 1292, 1829, 2098, 2278
BspCNI CTCAG 7 cut(s) 44, 178, 269, 1013, 1453, 1621, 2029
BspHI TCATGA 1 cut(s) 1837
BspLI GGNNCC 6 cut(s) 414, 1243, 1522, 2000, 2007, 2403
BspMAI CTGCAG 1 cut(s) 179
BspMI ACCTGC 2 cut(s) 2178, 2357
BspQI GCTCTTC 1 cut(s) 2036
BspT107I GGYRCC 2 cut(s) 412, 1998
BspTI CTTAAG 1 cut(s) 1478
BspTNI GGTCTC 1 cut(s) 1937
BsrDI GCAATG 1 cut(s) 2250
BsrFI RCCGGY 1 cut(s) 497
BsrGI TGTACA 2 cut(s) 361, 2163
BsrI ACTGG 5 cut(s) 136, 337, 482, 1787, 1830
BssAI RCCGGY 1 cut(s) 497
BssECI CCNNGG 2 cut(s) 1524, 1807
BssNAI GTATAC 1 cut(s) 1717
BssT1I CCWWGG 1 cut(s) 1807
Bst1107I GTATAC 1 cut(s) 1717
Bst2UI CCWGG 2 cut(s) 1607, 2003
Bst4CI ACNGT 8 cut(s) 379, 448, 453, 667, 686, 902, 970, 2031
Bst6I CTCTTC 1 cut(s) 2036
BstAFI CTTAAG 1 cut(s) 1478
BstAPI GCANNNNNTGC 1 cut(s) 1919
BstAUI TGTACA 2 cut(s) 361, 2163
BstBAI YACGTR 2 cut(s) 77, 1969
BstC8I GCNNGC 5 cut(s) 6, 100, 172, 1413, 1845
BstDEI CTNAG 9 cut(s) 31, 186, 256, 674, 1000, 1205, 1440, 1629, 2037
BstF5I GGATG 6 cut(s) 958, 1047, 1791, 1876, 2354, 2383
BstHHI GCGC 3 cut(s) 384, 907, 1814
BstMAI GTCTC 4 cut(s) 149, 237, 692, 1937
BstMWI GCNNNNNNNGC 4 cut(s) 1811, 1919, 2104, 2351
BstNI CCWGG 2 cut(s) 1607, 2003
BstNSI RCATGY 1 cut(s) 1847
BstSCI CCNGG 4 cut(s) 1523, 1605, 1866, 2001
BstSFI CTRYAG 4 cut(s) 175, 204, 916, 2407
BstSLI GKGCMC 2 cut(s) 306, 958
BstV1I GCAGC 6 cut(s) 161, 1314, 1317, 1319, 1626, 1826
BstV2I GAAGAC 3 cut(s) 973, 1427, 1798
BstX2I RGATCY 5 cut(s) 34, 339, 1038, 2005, 2401
BstXI CCANNNNNNTGG 1 cut(s) 1945
BstYI RGATCY 5 cut(s) 34, 339, 1038, 2005, 2401
BstZ17I GTATAC 1 cut(s) 1717
BsuI GTATCC 1 cut(s) 943
BsuRI GGCC 6 cut(s) 480, 842, 1292, 1829, 2098, 2278
BtrI CACGTC 2 cut(s) 1226, 2050
BtsCI GGATG 6 cut(s) 958, 1047, 1791, 1876, 2354, 2383
BtsIMutI CAGTG 2 cut(s) 384, 672
BveI ACCTGC 2 cut(s) 2178, 2357
Cac8I GCNNGC 5 cut(s) 6, 100, 172, 1413, 1845
CaiI CAGNNNCTG 1 cut(s) 370
CciI TCATGA 1 cut(s) 1837
CfoI GCGC 3 cut(s) 384, 907, 1814
Cfr10I RCCGGY 1 cut(s) 497
Cfr13I GGNCC 2 cut(s) 479, 1241
CviAII CATG 7 cut(s) 103, 442, 502, 838, 1838, 1844, 2417
DdeI CTNAG 9 cut(s) 31, 186, 256, 674, 1000, 1205, 1440, 1629, 2037
DraI TTTAAA 2 cut(s) 1471, 1908
DraIII CACNNNGTG 1 cut(s) 779
EaeI YGGCCR 1 cut(s) 840
Eam1104I CTCTTC 1 cut(s) 2036
EarI CTCTTC 1 cut(s) 2036
Eco130I CCWWGG 1 cut(s) 1807
Eco147I AGGCCT 2 cut(s) 1292, 2278
Eco24I GRGCYC 2 cut(s) 32, 1405
Eco31I GGTCTC 1 cut(s) 1937
Eco32I GATATC 2 cut(s) 133, 1422
Eco47I GGWCC 1 cut(s) 1241
Eco57I CTGAAG 3 cut(s) 602, 1170, 2346
Eco72I CACGTG 2 cut(s) 77, 1969
EcoRI GAATTC 1 cut(s) 394
EcoRII CCWGG 2 cut(s) 1605, 2001
EcoRV GATATC 2 cut(s) 133, 1422
EcoT14I CCWWGG 1 cut(s) 1807
EcoT38I GRGCYC 2 cut(s) 32, 1405
ErhI CCWWGG 1 cut(s) 1807
FaeI CATG 7 cut(s) 106, 445, 505, 841, 1841, 1847, 2420
FalI AAGNNNNNCTT 4 cut(s) 1791, 1823, 2166, 2198
FaqI GGGAC 4 cut(s) 26, 636, 1212, 2002
FatI CATG 7 cut(s) 102, 441, 501, 837, 1837, 1843, 2416
FbaI TGATCA 3 cut(s) 1156, 1387, 2425
FblI GTMKAC 1 cut(s) 1716
Fnu4HI GCNGC 6 cut(s) 175, 1308, 1328, 1331, 1640, 1815
FokI GGATG 6 cut(s) 945, 1034, 1798, 1883, 2341, 2390
FriOI GRGCYC 2 cut(s) 32, 1405
Fsp4HI GCNGC 6 cut(s) 175, 1308, 1328, 1331, 1640, 1815
FspBI CTAG 8 cut(s) 152, 977, 1034, 1139, 1895, 2091, 2271, 2280
GlaI GCGC 3 cut(s) 383, 906, 1813
GluI GCNGC 6 cut(s) 175, 1308, 1328, 1331, 1640, 1815
GsaI CCCAGC 1 cut(s) 129
HaeIII GGCC 6 cut(s) 480, 842, 1292, 1829, 2098, 2278
HapII CCGG 4 cut(s) 498, 1524, 1867, 2340
HhaI GCGC 3 cut(s) 384, 907, 1814
Hin1II CATG 7 cut(s) 106, 445, 505, 841, 1841, 1847, 2420
Hin6I GCGC 3 cut(s) 382, 905, 1812
HinP1I GCGC 3 cut(s) 382, 905, 1812
HincII GTYRAC 1 cut(s) 2034
HindII GTYRAC 1 cut(s) 2034
HindIII AAGCTT 1 cut(s) 1182
HpaII CCGG 4 cut(s) 498, 1524, 1867, 2340
HphI GGTGA 3 cut(s) 385, 1121, 2308
Hpy166II GTNNAC 4 cut(s) 304, 956, 1717, 2034
Hpy188III TCNNGA 8 cut(s) 560, 586, 924, 1160, 1767, 1838, 2009, 2183
Hpy8I GTNNAC 4 cut(s) 304, 956, 1717, 2034
Hpy99I CGWCG 2 cut(s) 88, 2051
HpyAV CCTTC 7 cut(s) 354, 426, 1255, 1604, 1953, 2088, 2268
HpyCH4III ACNGT 8 cut(s) 379, 448, 453, 667, 686, 902, 970, 2031
HpyCH4IV ACGT 5 cut(s) 76, 83, 1225, 1968, 2049
HpyF10VI GCNNNNNNNGC 4 cut(s) 1811, 1919, 2104, 2351
HpyF3I CTNAG 9 cut(s) 31, 186, 256, 674, 1000, 1205, 1440, 1629, 2037
HpySE526I ACGT 5 cut(s) 76, 83, 1225, 1968, 2049
Hsp92II CATG 7 cut(s) 106, 445, 505, 841, 1841, 1847, 2420
HspAI GCGC 3 cut(s) 382, 905, 1812
KpnI GGTACC 1 cut(s) 2002
Ksp22I TGATCA 3 cut(s) 1156, 1387, 2425
LguI GCTCTTC 1 cut(s) 2036
LmnI GCTCC 5 cut(s) 1395, 1451, 1693, 2077, 2342
Lsp1109I GCAGC 6 cut(s) 161, 1314, 1317, 1319, 1626, 1826
LweI GCATC 1 cut(s) 2363
MaeI CTAG 8 cut(s) 152, 977, 1034, 1139, 1895, 2091, 2271, 2280
MaeII ACGT 5 cut(s) 76, 83, 1225, 1968, 2049
MaeIII GTNAC 7 cut(s) 79, 373, 970, 1208, 1736, 1969, 2203
MboII GAAGA 9 cut(s) 224, 229, 855, 973, 1099, 1427, 1803, 1826, 2053
MflI RGATCY 5 cut(s) 34, 339, 1038, 2005, 2401
MhlI GDGCHC 4 cut(s) 32, 306, 958, 1405
MlsI TGGCCA 1 cut(s) 842
MluNI TGGCCA 1 cut(s) 842
MlyI GAGTC 4 cut(s) 151, 361, 1210, 2017
MmeI TCCRAC 5 cut(s) 293, 813, 1390, 1583, 2055
Mox20I TGGCCA 1 cut(s) 842
MscI TGGCCA 1 cut(s) 842
MslI CAYNNNNRTG 3 cut(s) 1076, 1842, 1869
Msp20I TGGCCA 1 cut(s) 842
MspA1I CMGCKG 2 cut(s) 2212, 2412
MspCI CTTAAG 1 cut(s) 1478
MspI CCGG 4 cut(s) 498, 1524, 1867, 2340
MspR9I CCNGG 4 cut(s) 1525, 1607, 1868, 2003
Mva1269I GAATGC 1 cut(s) 76
MvaI CCWGG 2 cut(s) 1607, 2003
MwoI GCNNNNNNNGC 4 cut(s) 1811, 1919, 2104, 2351
NciI CCSGG 2 cut(s) 1525, 1868
NlaIII CATG 7 cut(s) 106, 445, 505, 841, 1841, 1847, 2420
NlaIV GGNNCC 6 cut(s) 414, 1243, 1522, 2000, 2007, 2403
NmuCI GTSAC 2 cut(s) 373, 1969
NspI RCATGY 1 cut(s) 1847
PaeI GCATGC 1 cut(s) 1847
PagI TCATGA 1 cut(s) 1837
PceI AGGCCT 2 cut(s) 1292, 2278
PciSI GCTCTTC 1 cut(s) 2036
PctI GAATGC 1 cut(s) 76
PfeI GAWTC 7 cut(s) 220, 505, 785, 872, 1082, 1598, 1663
PfoI TCCNGGA 1 cut(s) 1605
PkrI GCNGC 6 cut(s) 176, 1309, 1329, 1332, 1641, 1816
PleI GAGTC 4 cut(s) 151, 361, 1210, 2017
PmaCI CACGTG 2 cut(s) 77, 1969
PmlI CACGTG 2 cut(s) 77, 1969
PpsI GAGTC 4 cut(s) 151, 361, 1210, 2017
Ppu21I YACGTR 2 cut(s) 77, 1969
PshBI ATTAAT 1 cut(s) 596
PsiI TTATAA 1 cut(s) 1122
Psp6I CCWGG 2 cut(s) 1605, 2001
PspCI CACGTG 2 cut(s) 77, 1969
PspFI CCCAGC 1 cut(s) 125
PspGI CCWGG 2 cut(s) 1605, 2001
PspN4I GGNNCC 6 cut(s) 414, 1243, 1522, 2000, 2007, 2403
PspPI GGNCC 2 cut(s) 479, 1241
PstI CTGCAG 1 cut(s) 179
PstNI CAGNNNCTG 1 cut(s) 370
PsuI RGATCY 5 cut(s) 34, 339, 1038, 2005, 2401
PvuII CAGCTG 1 cut(s) 2212
RseI CAYNNNNRTG 3 cut(s) 1076, 1842, 1869
SapI GCTCTTC 1 cut(s) 2036
SatI GCNGC 6 cut(s) 175, 1308, 1328, 1331, 1640, 1815
Sau96I GGNCC 2 cut(s) 479, 1241
ScaI AGTACT 1 cut(s) 1554
SchI GAGTC 4 cut(s) 151, 361, 1210, 2017
ScrFI CCNGG 4 cut(s) 1525, 1607, 1868, 2003
SduI GDGCHC 4 cut(s) 32, 306, 958, 1405
SfaNI GCATC 1 cut(s) 2363
SfcI CTRYAG 4 cut(s) 175, 204, 916, 2407
SinI GGWCC 1 cut(s) 1241
SmiI ATTTAAAT 1 cut(s) 1908
SmiMI CAYNNNNRTG 3 cut(s) 1076, 1842, 1869
SmlI CTYRAG 3 cut(s) 633, 1478, 1977
SmoI CTYRAG 3 cut(s) 633, 1478, 1977
SphI GCATGC 1 cut(s) 1847
SseBI AGGCCT 2 cut(s) 1292, 2278
SsiI CCGC 1 cut(s) 2412
SspI AATATT 2 cut(s) 93, 2015
SspMI CTAG 8 cut(s) 152, 977, 1034, 1139, 1895, 2091, 2271, 2280
StuI AGGCCT 2 cut(s) 1292, 2278
StyD4I CCNGG 4 cut(s) 1523, 1605, 1866, 2001
StyI CCWWGG 1 cut(s) 1807
SwaI ATTTAAAT 1 cut(s) 1908
TaaI ACNGT 8 cut(s) 379, 448, 453, 667, 686, 902, 970, 2031
TaiI ACGT 5 cut(s) 79, 86, 1228, 1971, 2052
TaqI TCGA 3 cut(s) 86, 1110, 2235
TatI WGTACW 5 cut(s) 361, 448, 453, 1552, 2163
TfiI GAWTC 7 cut(s) 220, 505, 785, 872, 1082, 1598, 1663
TscAI CASTG 2 cut(s) 384, 672
TseFI GTSAC 2 cut(s) 373, 1969
TseI GCWGC 6 cut(s) 174, 1307, 1327, 1330, 1639, 1814
Tsp45I GTSAC 2 cut(s) 373, 1969
TspDTI ATGAA 6 cut(s) 224, 387, 518, 855, 1716, 1826
TspGWI ACGGA 1 cut(s) 1408
TspRI CASTG 2 cut(s) 384, 672
Vha464I CTTAAG 1 cut(s) 1478
VneI GTGCAC 2 cut(s) 302, 954
VpaK11BI GGWCC 1 cut(s) 1241
VspI ATTAAT 1 cut(s) 596
XapI RAATTY 4 cut(s) 264, 394, 2178, 2347
XceI RCATGY 1 cut(s) 1847
XmiI GTMKAC 1 cut(s) 1716
XspI CTAG 8 cut(s) 152, 977, 1034, 1139, 1895, 2091, 2271, 2280
ZrmI AGTACT 1 cut(s) 1554
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.