Rroxscaffold_3G00241180

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000487
Physical Location & Seq
Reverse (-)
33242219 .. 33252477
10259 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00241180.1

Sequence Viewer

Length: 2865 bp
ATGGATCATAGAATTCAGGTGTTTCTGCTTCTTATATTCACGCCTTTTCTCGTTTTAGCAAACCATGAGACAAGTTCTCTGGATGTTACTGGTTTAAAGTCTCTAAGGACACTATGGACTAACACGCCTGCAAGTTGGGGGACTCTGGATCCTTGTGAAGATGGTTGGGATGGCATTGGGTGTCACAACATGCGTGTGGTCTCTTTAACATTACCGAGTATGAATTTGACTGGCACACTCTCTGGAGATATTGGACAGTTATCTGAACTACAAATGTTGGATCTATCTTACAACAAGGGCCTGACAGGACCACTCCCAGAAGAAATTAGCAGTTTGAAGAAGCTATCTAGCATAATTCTGGTTGGTTGCAGCTTCTCTGGTCCCATACCTCCTACTATAGGGTCCCTACAGGAGCTAATATTTCTGTCTCTGAATTCTAACGGATTTAGTGGGAGCATCCCATCTTCCATTGGTAATCTTTCTAAACTATATTGGCTGGATCTAGCTGACAACCATCTTGAAGGACCCATCCCAGTTTCTGATGGTGGTGAACCTGGTCTTGACATGCTCAGTCATTGCAAGCACTTTCATCTCGGAATGAATAAGCTCTCAGGCCCAATTCCATCAAAGCTTTTTAGCTCAAACATGAGCCTGATACATGTGCTCTTCGAAAGTAATCAACTCACTGGCAGCATCCCTTCCAGCCTTGGACATGTAACGTCTTTGGAGGTTGTGCGATTTGATGGAAACATGTTATCTGGGCCTATTCCTCTGAGCCTCAACAGTCTTACAAATGTTTCTCAGCTGTTCTTGTCTAATAACAAGCTGAGCGGCCCTGCTCCCAACCTTACTGGCATGAACCTTCTCCATTATGTGGATTTGAGCAATAATAGTTTCGAAGTGTCTGATGTTCCACCATGGTTTTCAACACTAAAGTCTTTGACCACATTAATAATGGAGAACACACAAATTAAAGGAGAAATACCTGCTGCTCTATTCAGCCTTTCAAACTTACAGTCTGTGGTCCTGAGGAACAACCAGCTCAATGGCACCTTGGATATTGGCGCTACCTATAGCAGTCAATTGCAACTCATTGATTTACAAAAAAATTTTATTATGGAATATGAAGGAAATGGAGGATACAATGGTACTTTAATACTTGTTCAAAATCCAGTTTGTGAAGAACCTGGAGTGTCACAGAGTTACTGCAAGATTTCGCAATCATCTGATGTTGTCCCATATAAAACATTGCCAAATAACTGTGTGCCCAGTCCCTGCGGTTTAAATCAGGTTTCAAGCCCCAACTGTAAATGTGCATATCCATATGAGGGGACTCTAATCTTTAGAGCTCCTACCTTCTCAGACTTGAACTCAACTGGCTACAAAGAGCTTGAGAAGAATCTCATTGATTCTTTCTTGTCCCATGACCTTAGCGTCGATTCAGTCGCTTTGAGTTTCCTCACCAAGGATTCGCTTGCATACCTTAGGTTGAGCCTAGAAGTATTCCCACAAAGCCAAGATCGTTTCAGTAGAAAGGAAGTTTCTAGTATTGCTTTTCTACTCAGTAACCAAACGTTCAAGCCTCAAAAATCTTTTGGACCATTCTATTTCATTGGTGATGATTATGAACACTTCGCAGTAGAAACGGAACCATCAGAATCAAACAAATCGTCTAATGTGGGCATTATTATTGGAGCAGCAGCTGGTAGTTCTGTTCTTGTGCTAATATTACTCCTTGTAGGAATTTATGCTATTCGCCAGAAGAGAAGGGCAAAAAGGGCCACTGATCAAAACAATCCTTTTAGCAAATGGGATGTGAATGATAAGACCAGAGGTAGCACTCCCCAATTGAAGGGGGCTAGATCGTTCTCTTTTGAAGAGCTCATGAAATACAGCAACAACTTTTCAGAAGCAAATGATGTTGGATCTGGGGGCTATGGGAAGGTTTACCTTGGAACTCTTCCCACAGGGCAACTGATTGCCATCAAACGAGCTCACAAAGAATCTATCCAAGGTGGACATGAGTTCAAAACTGAGATTGAACTTCTTTCACGGGTTCATCATAAGCACCTTGTCAGCCTTGTAGGATTTTGTTTTGACCGAGGTGAGCAGATGCTGGTGTATGAGTATGTAGCAAATGGGACTCTTAAGGATAGTCTTTCAGGTAAGTCAGGAATCAGATTAGATTGGCAGAGGAGACTTAAAATAGCACTTGGTGCGGCTAGAGGCGTAGCCTATCTTCATGAACTTTGCGACCCTCCAATTATACACAGGGATATAAAATCAACTAATGTTCTGTTGGACAACAGGTTGAATGCAAAAGTTGCTGATTTTGGTCTCTCCAAGTCCATGGGTAATAGTGGAAGGGATCATGTCTCCACTCAAGTTAAAGGGACAATGGGATACATGGATCCTGAATATTACATGACCCAACGATTGACTGAGAAGAGTGATGTTTATGGTTTTGGAGTGCTAATGTTGGAGCTACTTACTGCAAGGAAACCGATAGAACAAGGAAAATATATCGTGCGAGAAGTAAGGATGGCAATGGATAAGACCAAGGATTTATACAACCTTCATGTAATCCTAGATTCTGCCATTGGTTTGGGAACGACACTCAAAGGTTTAGAGAGGTTTGTGGATCTTGCAATGACGTGTGTTGAAGAAGAAGGAGCCAACAGGCCTACTATGAGTGAGGTGGTAAAGGAGATTGAAAACATTATGCAGCTTGCTGGTCTGAACCCTAATGCTGAGTCGGCATCCACTTCCGCAAGCTATGAGGAGGCAAGCTCTAAGCATCCTTACAGCAATGAGGCCTTTGATTATAGTGGAGTATTTCCAGCTTCAAAGATAGAGCCGCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 Pkinase Pkinase_Tyr

Protein Analysis

954

Amino Acids

104.61

Weight (kDa)

5.76

Isoelectric Point (pI)

34.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 62 - 168 6.4e-08 Leucine-rich repeat region
Pkinase PF00069 637 - 902 2e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 639 - 903 1.4e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1433
Acc36I ACCTGC 1 cut(s) 994
AccB1I GGYRCC 1 cut(s) 1049
AccB7I CCANNNNNTGG 1 cut(s) 874
AccBSI CCGCTC 1 cut(s) 831
AciI CCGC 5 cut(s) 831, 1278, 2219, 2769, 2858
AclI AACGTT 1 cut(s) 1574
AcsI RAATTY 5 cut(s) 12, 223, 433, 1108, 1743
AdeI CACNNNGTG 1 cut(s) 2216
AfaI GTAC 1 cut(s) 1150
AfiI CCNNNNNNNGG 5 cut(s) 398, 874, 1328, 1465, 1852
AflII CTTAAG 1 cut(s) 2147
AflIII ACRYGT 4 cut(s) 658, 712, 750, 2654
AjiI CACGTC 1 cut(s) 2655
AjnI CCWGG 2 cut(s) 553, 1186
Alw21I GWGCWC 4 cut(s) 666, 1351, 1884, 1996
Alw26I GTCTC 7 cut(s) 62, 105, 205, 432, 2191, 2342, 2380
AlwNI CAGNNNCTG 4 cut(s) 539, 1275, 1703, 2116
AoxI GGCC 7 cut(s) 298, 613, 761, 832, 1779, 2681, 2814
ApeKI GCWGC 6 cut(s) 369, 690, 989, 1697, 1700, 2725
ApoI RAATTY 5 cut(s) 12, 223, 433, 1108, 1743
ArsI GACNNNNNNTTYG 4 cut(s) 1001, 1033, 1655, 1687
AseI ATTAAT 1 cut(s) 950
AspLEI GCGC 1 cut(s) 1067
AsuHPI GGTGA 4 cut(s) 560, 1453, 1628, 2117
AsuII TTCGAA 2 cut(s) 669, 897
AvaII GGWCC 6 cut(s) 308, 380, 402, 524, 1024, 1598
AxyI CCTNAGG 2 cut(s) 1028, 1484
BaeGI GKGCMC 1 cut(s) 1269
BaeI ACNNNNGTAYC 2 cut(s) 1132, 1165
BamHI GGATCC 2 cut(s) 148, 2410
BanI GGYRCC 1 cut(s) 1049
BanII GRGCYC 3 cut(s) 1351, 1884, 1996
BarI GAAGNNNNNNTAC 2 cut(s) 2223, 2255
Bbv12I GWGCWC 4 cut(s) 666, 1351, 1884, 1996
BbvI GCAGC 6 cut(s) 381, 702, 976, 1709, 1712, 2737
BciT130I CCWGG 2 cut(s) 555, 1188
BciVI GTATCC 2 cut(s) 1133, 2396
BclI TGATCA 1 cut(s) 1786
BcoDI GTCTC 7 cut(s) 62, 105, 205, 432, 2191, 2342, 2380
BfaI CTAG 7 cut(s) 348, 503, 1496, 1545, 1860, 2223, 2588
BfmI CTRYAG 3 cut(s) 396, 407, 1072
BfoI RGCGCY 1 cut(s) 1068
BfrI CTTAAG 1 cut(s) 2147
BfuAI ACCTGC 1 cut(s) 994
BfuI GTATCC 2 cut(s) 1133, 2396
BisI GCNGC 9 cut(s) 370, 691, 832, 990, 1698, 1701, 2220, 2726, 2858
BlpI GCTNAGC 1 cut(s) 827
BlsI GCNGC 9 cut(s) 371, 692, 833, 991, 1699, 1702, 2221, 2727, 2859
Bme1390I CCNGG 2 cut(s) 555, 1188
Bme18I GGWCC 6 cut(s) 308, 380, 402, 524, 1024, 1598
BmgBI CACGTC 1 cut(s) 2655
BmiI GGNNCC 9 cut(s) 150, 382, 403, 404, 526, 1051, 1650, 2412, 2674
BmrFI CCNGG 2 cut(s) 555, 1188
BmrI ACTGGG 2 cut(s) 527, 1263
BmsI GCATC 5 cut(s) 465, 702, 2103, 2768, 2806
BmuI ACTGGG 2 cut(s) 527, 1263
BplI GAGNNNNNCTC 2 cut(s) 2774, 2806
BpmI CTGGAG 2 cut(s) 264, 1209
Bpu10I CCTNAGC 1 cut(s) 1430
Bpu1102I GCTNAGC 1 cut(s) 827
Bpu14I TTCGAA 2 cut(s) 669, 897
BpuEI CTTGAG 2 cut(s) 1412, 2367
BsaBI GATNNNNATC 1 cut(s) 1982
BsaI GGTCTC 2 cut(s) 205, 2342
BsaJI CCNNGG 9 cut(s) 706, 917, 1053, 1464, 1951, 2011, 2101, 2349, 2559
Bsc4I CCNNNNNNNGG 5 cut(s) 398, 874, 1328, 1465, 1852
Bse1I ACTGG 8 cut(s) 94, 235, 533, 691, 856, 1172, 1269, 1381
Bse21I CCTNAGG 2 cut(s) 1028, 1484
Bse3DI GCAATG 5 cut(s) 574, 1247, 2553, 2655, 2815
Bse8I GATNNNNATC 1 cut(s) 1982
BseBI CCWGG 2 cut(s) 555, 1188
BseDI CCNNGG 9 cut(s) 706, 917, 1053, 1464, 1951, 2011, 2101, 2349, 2559
BseGI GGATG 9 cut(s) 88, 175, 456, 528, 693, 1819, 2547, 2759, 2797
BseJI GATNNNNATC 1 cut(s) 1982
BseLI CCNNNNNNNGG 5 cut(s) 398, 874, 1328, 1465, 1852
BseMI GCAATG 5 cut(s) 574, 1247, 2553, 2655, 2815
BseNI ACTGG 8 cut(s) 94, 235, 533, 691, 856, 1172, 1269, 1381
BseRI GAGGAG 2 cut(s) 2209, 2795
BseSI GKGCMC 1 cut(s) 1269
BseXI GCAGC 6 cut(s) 381, 702, 976, 1709, 1712, 2737
BshFI GGCC 7 cut(s) 300, 615, 763, 834, 1781, 2683, 2816
BshNI GGYRCC 1 cut(s) 1049
BsiHKAI GWGCWC 4 cut(s) 666, 1351, 1884, 1996
BslFI GGGAC 9 cut(s) 154, 366, 388, 1220, 1257, 1345, 1405, 2155, 2407
BslI CCNNNNNNNGG 5 cut(s) 398, 874, 1328, 1465, 1852
BsmAI GTCTC 7 cut(s) 62, 105, 205, 432, 2191, 2342, 2380
BsmFI GGGAC 9 cut(s) 154, 366, 388, 1220, 1257, 1345, 1405, 2155, 2407
BsmI GAATGC 1 cut(s) 2320
BsnI GGCC 7 cut(s) 300, 615, 763, 834, 1781, 2683, 2816
Bso31I GGTCTC 2 cut(s) 205, 2342
Bsp119I TTCGAA 2 cut(s) 669, 897
Bsp1286I GDGCHC 5 cut(s) 666, 1269, 1351, 1884, 1996
Bsp1720I GCTNAGC 1 cut(s) 827
Bsp19I CCATGG 2 cut(s) 917, 2349
BspACI CCGC 5 cut(s) 831, 1278, 2219, 2769, 2858
BspANI GGCC 7 cut(s) 300, 615, 763, 834, 1781, 2683, 2816
BspHI TCATGA 2 cut(s) 1884, 2242
BspLI GGNNCC 9 cut(s) 150, 382, 403, 404, 526, 1051, 1650, 2412, 2674
BspMI ACCTGC 1 cut(s) 994
BspQI GCTCTTC 2 cut(s) 671, 1872
BspT104I TTCGAA 2 cut(s) 669, 897
BspT107I GGYRCC 1 cut(s) 1049
BspTI CTTAAG 1 cut(s) 2147
BspTNI GGTCTC 2 cut(s) 205, 2342
BsrBI CCGCTC 1 cut(s) 831
BsrDI GCAATG 5 cut(s) 574, 1247, 2553, 2655, 2815
BsrI ACTGG 8 cut(s) 94, 235, 533, 691, 856, 1172, 1269, 1381
BssECI CCNNGG 9 cut(s) 706, 917, 1053, 1464, 1951, 2011, 2101, 2349, 2559
BssT1I CCWWGG 8 cut(s) 706, 917, 1053, 1464, 1951, 2011, 2349, 2559
Bst2UI CCWGG 2 cut(s) 555, 1188
Bst4CI ACNGT 5 cut(s) 258, 785, 1017, 1262, 1307
Bst6I CTCTTC 5 cut(s) 671, 1757, 1872, 1965, 2441
BstAFI CTTAAG 1 cut(s) 2147
BstAPI GCANNNNNTGC 2 cut(s) 2216, 2324
BstBI TTCGAA 2 cut(s) 669, 897
BstC8I GCNNGC 6 cut(s) 129, 581, 1476, 2730, 2773, 2788
BstDSI CCRYGG 2 cut(s) 917, 2349
BstENI CCTNNNNNAGG 2 cut(s) 396, 1463
BstF5I GGATG 9 cut(s) 88, 175, 456, 528, 693, 1819, 2547, 2759, 2797
BstH2I RGCGCY 1 cut(s) 1068
BstHHI GCGC 1 cut(s) 1067
BstMAI GTCTC 7 cut(s) 62, 105, 205, 432, 2191, 2342, 2380
BstMWI GCNNNNNNNGC 4 cut(s) 1778, 2216, 2324, 2756
BstNI CCWGG 2 cut(s) 555, 1188
BstNSI RCATGY 5 cut(s) 193, 568, 662, 716, 754
BstSCI CCNGG 2 cut(s) 553, 1186
BstSFI CTRYAG 3 cut(s) 396, 407, 1072
BstSLI GKGCMC 1 cut(s) 1269
BstV1I GCAGC 6 cut(s) 381, 702, 976, 1709, 1712, 2737
BstX2I RGATCY 6 cut(s) 148, 280, 499, 1925, 2410, 2641
BstXI CCANNNNNNTGG 3 cut(s) 1046, 2350, 2605
BstYI RGATCY 6 cut(s) 148, 280, 499, 1925, 2410, 2641
Bsu36I CCTNAGG 2 cut(s) 1028, 1484
BsuI GTATCC 2 cut(s) 1133, 2396
BsuRI GGCC 7 cut(s) 300, 615, 763, 834, 1781, 2683, 2816
BtgI CCRYGG 2 cut(s) 917, 2349
BtrI CACGTC 1 cut(s) 2655
BtsCI GGATG 9 cut(s) 88, 175, 456, 528, 693, 1819, 2547, 2759, 2797
BtsIMutI CAGTG 2 cut(s) 684, 1782
BveI ACCTGC 1 cut(s) 994
Cac8I GCNNGC 6 cut(s) 129, 581, 1476, 2730, 2773, 2788
CaiI CAGNNNCTG 4 cut(s) 539, 1275, 1703, 2116
CciI TCATGA 2 cut(s) 1884, 2242
CfoI GCGC 1 cut(s) 1067
CseI GACGC 1 cut(s) 1423
CsiI ACCWGGT 1 cut(s) 553
Csp6I GTAC 1 cut(s) 1149
CviQI GTAC 1 cut(s) 1149
DraI TTTAAA 2 cut(s) 96, 1284
DraIII CACNNNGTG 1 cut(s) 2216
DrdI GACNNNNNNGTC 1 cut(s) 1433
DseDI GACNNNNNNGTC 1 cut(s) 1433
Eam1104I CTCTTC 5 cut(s) 671, 1757, 1872, 1965, 2441
EarI CTCTTC 5 cut(s) 671, 1757, 1872, 1965, 2441
Ecl136II GAGCTC 3 cut(s) 1349, 1882, 1994
Eco130I CCWWGG 8 cut(s) 706, 917, 1053, 1464, 1951, 2011, 2349, 2559
Eco147I AGGCCT 2 cut(s) 2683, 2816
Eco24I GRGCYC 3 cut(s) 1351, 1884, 1996
Eco31I GGTCTC 2 cut(s) 205, 2342
Eco47I GGWCC 6 cut(s) 308, 380, 402, 524, 1024, 1598
Eco53kI GAGCTC 3 cut(s) 1349, 1882, 1994
Eco81I CCTNAGG 2 cut(s) 1028, 1484
EcoICRI GAGCTC 3 cut(s) 1349, 1882, 1994
EcoNI CCTNNNNNAGG 2 cut(s) 396, 1463
EcoO109I RGGNCCY 3 cut(s) 298, 402, 524
EcoRI GAATTC 2 cut(s) 12, 433
EcoRII CCWGG 2 cut(s) 553, 1186
EcoT14I CCWWGG 8 cut(s) 706, 917, 1053, 1464, 1951, 2011, 2349, 2559
EcoT38I GRGCYC 3 cut(s) 1351, 1884, 1996
ErhI CCWWGG 8 cut(s) 706, 917, 1053, 1464, 1951, 2011, 2349, 2559
FaqI GGGAC 9 cut(s) 154, 366, 388, 1220, 1257, 1345, 1405, 2155, 2407
FauNDI CATATG 1 cut(s) 1324
FbaI TGATCA 1 cut(s) 1786
Fnu4HI GCNGC 9 cut(s) 370, 691, 832, 990, 1698, 1701, 2220, 2726, 2858
FokI GGATG 9 cut(s) 95, 182, 443, 515, 680, 1826, 2554, 2746, 2784
FriOI GRGCYC 3 cut(s) 1351, 1884, 1996
Fsp4HI GCNGC 9 cut(s) 370, 691, 832, 990, 1698, 1701, 2220, 2726, 2858
FspBI CTAG 7 cut(s) 348, 503, 1496, 1545, 1860, 2223, 2588
GlaI GCGC 1 cut(s) 1066
GluI GCNGC 9 cut(s) 370, 691, 832, 990, 1698, 1701, 2220, 2726, 2858
GsuI CTGGAG 2 cut(s) 264, 1209
HaeII RGCGCY 1 cut(s) 1068
HaeIII GGCC 7 cut(s) 300, 615, 763, 834, 1781, 2683, 2816
HgaI GACGC 1 cut(s) 1423
HhaI GCGC 1 cut(s) 1067
Hin6I GCGC 1 cut(s) 1065
HinP1I GCGC 1 cut(s) 1065
HindIII AAGCTT 1 cut(s) 629
HphI GGTGA 4 cut(s) 560, 1453, 1628, 2117
Hpy166II GTNNAC 3 cut(s) 551, 1948, 2018
Hpy8I GTNNAC 3 cut(s) 551, 1948, 2018
Hpy99I CGWCG 1 cut(s) 1439
HpyCH4III ACNGT 5 cut(s) 258, 785, 1017, 1262, 1307
HpyCH4IV ACGT 3 cut(s) 719, 1574, 2654
HpyF10VI GCNNNNNNNGC 4 cut(s) 1778, 2216, 2324, 2756
HpySE526I ACGT 3 cut(s) 719, 1574, 2654
HspAI GCGC 1 cut(s) 1065
KflI GGGWCCC 1 cut(s) 402
Ksp22I TGATCA 1 cut(s) 1786
LguI GCTCTTC 2 cut(s) 671, 1872
LmnI GCTCC 7 cut(s) 412, 453, 844, 1354, 1694, 2482, 2672
Lsp1109I GCAGC 6 cut(s) 381, 702, 976, 1709, 1712, 2737
LweI GCATC 5 cut(s) 465, 702, 2103, 2768, 2806
MabI ACCWGGT 1 cut(s) 553
MaeI CTAG 7 cut(s) 348, 503, 1496, 1545, 1860, 2223, 2588
MaeII ACGT 3 cut(s) 719, 1574, 2654
MaeIII GTNAC 6 cut(s) 85, 182, 715, 1194, 1202, 1565
MbiI CCGCTC 1 cut(s) 831
MfeI CAATTG 2 cut(s) 1082, 1847
MflI RGATCY 6 cut(s) 148, 280, 499, 1925, 2410, 2641
MhlI GDGCHC 5 cut(s) 666, 1269, 1351, 1884, 1996
MlyI GAGTC 4 cut(s) 136, 1327, 2137, 2762
MmeI TCCRAC 4 cut(s) 258, 1903, 2280, 2460
MseI TTAA 9 cut(s) 95, 206, 950, 972, 1154, 1283, 2148, 2202, 2388
MslI CAYNNNNRTG 1 cut(s) 194
MspA1I CMGCKG 2 cut(s) 805, 1703
MspCI CTTAAG 1 cut(s) 2147
MspR9I CCNGG 2 cut(s) 555, 1188
MunI CAATTG 2 cut(s) 1082, 1847
Mva1269I GAATGC 1 cut(s) 2320
MvaI CCWGG 2 cut(s) 555, 1188
MwoI GCNNNNNNNGC 4 cut(s) 1778, 2216, 2324, 2756
NcoI CCATGG 2 cut(s) 917, 2349
NdeI CATATG 1 cut(s) 1324
NlaIV GGNNCC 9 cut(s) 150, 382, 403, 404, 526, 1051, 1650, 2412, 2674
NmuCI GTSAC 2 cut(s) 182, 1194
NspI RCATGY 5 cut(s) 193, 568, 662, 716, 754
NspV TTCGAA 2 cut(s) 669, 897
PagI TCATGA 2 cut(s) 1884, 2242
PceI AGGCCT 2 cut(s) 2683, 2816
PciI ACATGT 3 cut(s) 658, 712, 750
PciSI GCTCTTC 2 cut(s) 671, 1872
PctI GAATGC 1 cut(s) 2320
PfeI GAWTC 8 cut(s) 1399, 1409, 1439, 1469, 1658, 2003, 2175, 2591
PflMI CCANNNNNTGG 1 cut(s) 874
PkrI GCNGC 9 cut(s) 371, 692, 833, 991, 1699, 1702, 2221, 2727, 2859
PleI GAGTC 4 cut(s) 136, 1327, 2137, 2761
PpsI GAGTC 4 cut(s) 136, 1327, 2137, 2761
PpuMI RGGWCCY 2 cut(s) 402, 524
PscI ACATGT 3 cut(s) 658, 712, 750
PshBI ATTAAT 1 cut(s) 950
Psp124BI GAGCTC 3 cut(s) 1351, 1884, 1996
Psp1406I AACGTT 1 cut(s) 1574
Psp5II RGGWCCY 2 cut(s) 402, 524
Psp6I CCWGG 2 cut(s) 553, 1186
PspGI CCWGG 2 cut(s) 553, 1186
PspN4I GGNNCC 9 cut(s) 150, 382, 403, 404, 526, 1051, 1650, 2412, 2674
PspPPI RGGWCCY 2 cut(s) 402, 524
PstNI CAGNNNCTG 4 cut(s) 539, 1275, 1703, 2116
PsuI RGATCY 6 cut(s) 148, 280, 499, 1925, 2410, 2641
PvuII CAGCTG 2 cut(s) 805, 1703
RsaI GTAC 1 cut(s) 1150
RsaNI GTAC 1 cut(s) 1149
RseI CAYNNNNRTG 1 cut(s) 194
SacI GAGCTC 3 cut(s) 1351, 1884, 1996
SapI GCTCTTC 2 cut(s) 671, 1872
SaqAI TTAA 9 cut(s) 95, 206, 950, 972, 1154, 1283, 2148, 2202, 2388
SatI GCNGC 9 cut(s) 370, 691, 832, 990, 1698, 1701, 2220, 2726, 2858
SchI GAGTC 4 cut(s) 136, 1327, 2137, 2762
ScrFI CCNGG 2 cut(s) 555, 1188
SduI GDGCHC 5 cut(s) 666, 1269, 1351, 1884, 1996
SexAI ACCWGGT 1 cut(s) 553
SfaNI GCATC 5 cut(s) 465, 702, 2103, 2768, 2806
SfcI CTRYAG 3 cut(s) 396, 407, 1072
SfuI TTCGAA 2 cut(s) 669, 897
SinI GGWCC 6 cut(s) 308, 380, 402, 524, 1024, 1598
SmiMI CAYNNNNRTG 1 cut(s) 194
SmlI CTYRAG 3 cut(s) 1391, 2147, 2382
SmoI CTYRAG 3 cut(s) 1391, 2147, 2382
SseBI AGGCCT 2 cut(s) 2683, 2816
SsiI CCGC 5 cut(s) 831, 1278, 2219, 2769, 2858
SspI AATATT 3 cut(s) 420, 1728, 2420
SspMI CTAG 7 cut(s) 348, 503, 1496, 1545, 1860, 2223, 2588
SstI GAGCTC 3 cut(s) 1351, 1884, 1996
StuI AGGCCT 2 cut(s) 2683, 2816
StyD4I CCNGG 2 cut(s) 553, 1186
StyI CCWWGG 8 cut(s) 706, 917, 1053, 1464, 1951, 2011, 2349, 2559
TaaI ACNGT 5 cut(s) 258, 785, 1017, 1262, 1307
TaiI ACGT 3 cut(s) 722, 1577, 2657
TaqI TCGA 3 cut(s) 669, 897, 1437
TaqII GACCGA 1 cut(s) 2115
TauI GCSGC 3 cut(s) 834, 2222, 2860
TfiI GAWTC 8 cut(s) 1399, 1409, 1439, 1469, 1658, 2003, 2175, 2591
Tru1I TTAA 9 cut(s) 95, 206, 950, 972, 1154, 1283, 2148, 2202, 2388
Tru9I TTAA 9 cut(s) 95, 206, 950, 972, 1154, 1283, 2148, 2202, 2388
TscAI CASTG 2 cut(s) 691, 1789
TseFI GTSAC 2 cut(s) 182, 1194
TseI GCWGC 6 cut(s) 369, 690, 989, 1697, 1700, 2725
Tsp45I GTSAC 2 cut(s) 182, 1194
TspGWI ACGGA 2 cut(s) 456, 1661
TspRI CASTG 2 cut(s) 691, 1789
Van91I CCANNNNNTGG 1 cut(s) 874
Vha464I CTTAAG 1 cut(s) 2147
VpaK11BI GGWCC 6 cut(s) 308, 380, 402, 524, 1024, 1598
VspI ATTAAT 1 cut(s) 950
XagI CCTNNNNNAGG 2 cut(s) 396, 1463
XapI RAATTY 5 cut(s) 12, 223, 433, 1108, 1743
XceI RCATGY 5 cut(s) 193, 568, 662, 716, 754
XcmI CCANNNNNNNNNTGG 1 cut(s) 952
XspI CTAG 7 cut(s) 348, 503, 1496, 1545, 1860, 2223, 2588
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.