Rh5AG283900

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000487
Physical Location & Seq
Reverse (-)
38454446 .. 38459689
5244 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG283900.1

Sequence Viewer

Length: 2637 bp
ATGGATCGAGTCACTCAAGTATTACGGCTGCTCGTGTTAATCCCAATTTTTGTTATTGCAGCAGAGGAAACTGTTCAGGAGTATAATGCTATTATGATACTCAGGGATGAATGGGGCATAAACCCTCCAAGTTGGGTTGGTTCAGATCCTTGTGGCGACTGGGATGGTATTACTTGCACCAATTCACGGATCACTGCTTTAACATTGGCAGACATGGGTTTGAAAGGCGGGCTACCTAGTGACATCGAGACGTTATCTGAGCTACAGATTCTGAATCTGGCTTTCAACGAGGACCTGAAGGGACAACTTCAAGCATCAATTGGAAACTTGACCAAACTAAAAACCGTAATCCTGGATGGTTGCAGATTCTCTGGTCCTATTCCAGCTACAATAGGATCTTTAAAGCAACTTTCTTATCTATCTCTGAAAAACAATAGATTTAGTGGTCCAATTCCACCTTCCATTGGCAATCTAGCCAATCTTGTCTTTCTGGACCTATCGGACAACAGGCTTGGGGATTCCATTCCAGTCTCTAATGGGACTGCACCTGGTCTTGATATGTTAAATAAAACAAAGCACTTTCATTTTTCAAATAACCAGCTCTCGGGCAGCATTCCACCTCAACTGTTCAGCTCAAATATGCCTCTGATACATTTGATTTTTGACAGAAATAATTTTACTGGCAGCATCCCTTCCACACTTGGACTTGTGAAAACTCTGGAGGCAGTACGCCTTGATAGAAATTCATTAAGTGGGCCTGTACCTACGAGCCTCAGAAATCTTACAAATGTGTCTGAACTGCACTTGTCCAACAATAAGCTGACTGGCCCGGTGCCCAACCTTACTCTCATGGATTCCCTCACCTATGTGGATATGAGCAATAATACTTTTGATGCGTCAGATATTCCTAATTGGTTTTCAACCTTGAAGTTCTTGACAACATTAATGATGGAAAACACAGGACTTCAGGGACAAGTCCCTCAAGCCCTTTTCAGCCTTCAAAATTTGGAGACAGTGATACTAAAGAACAACAGTCTCAATGGTACATTGGATATTGGAACCAATATTGGCAACCAATTGAACCTAATTGATCTGCAGAAGAACAACATTGCTGATCTTGCACCAATTGATGAGGGATCCAACTACACATTGATTCTAGTTGACAATCCAATTTGTGAGGGGAGTCAGAATAACATGGCAAAGAACTACTGTAATGGTTCTCCTACTAATTCCTCGATTTCAACTGCACCAAGTAATTGTGCTGGCTGTAGTTCAGGCCAGGTTGCTTCCCCCAACTGTAAATGTGCATCTCCCTATACACGGACTCTAGTCTTCTTATTTGTTTCTTTCTCAAACTTGGATGACATCAATTATTACAAAGCTCTCTCAAACAATCTCACAAGATCTCTTCACTCCAAAAACCTTCCTGTGGATTCAGTTTCACTGAGTCATCCGAGCTGGAGCTCATCTTATCAACTTGAAATTATCATAGAAATTTTCCCATCCGGTGATCAAGTTAGCTTCAACCAAACAGAAAGTTCGGCGATTACATCTGTTCTTAGCAACCAGAGTCTAGAGGGACGTCCAAATTCTTTTGGACCCTACTCTTTTCTTGTTCTTTACACCAACTCTGGAGGATCAAACAAGGGCGTGATAATTGGAACGGCAATTGGTGGTTCTGTGCTCCTTTCATTATTAGTCCTTGTAGGGCTTTATGCTCTCCACCAGAAGAGGAGAGCAGATGAGTCAATGAGTGGATCGATCCTTTTGACAGGGATTCCAAATAGCAGTGCTAGTGGTCCTCAACTAAAAGGAGCAAGATTGTTCTCATTTGAAGAGCTCAAGAAATGCACCGATGGTTTTTCAAAAGCAAATGATATTGGATCTGGGGGTTTTGGCCAGGTGTATAAGGGAATTCTTCCAACAGGCCAAATGGTTGCCATTAAAAGAGCTAAACGGGAATCTATGCAGGGAGGAGTTGAGTTCAATGCCGAGGTTGAGCTCCTATCACGAGTACATCATAAGAATCTTGTTGGCCTTGTAGGCTTTTGTTTTGAGCAAGGAGAACAAATATTGGTATATGAGTATGTTCCAAATGGTGATTTGAGGGACAGCCTATCAGGGAAGTCTGGAATCAGTGAAATGGATCACTTATCTACTCAAGTTAAAGGGACACTGGGCTACTTGGATCCTGAATATTATATGACTCAACAGTTGACTGACAAGAGCGACGTGTATAGCTTTGGCGTGGTAATGTTGGAGCTGATAACTGCTAGAAGGCCAATAATGCAAGGGAATTATATAGTGAGAGTGGTACAGATGACAATGGATAAGTCGAAAGATTTGTACAACCTTGATGACATTCTTGATCCATTCATTGGTTTAGGAACAGAGCTGAAAGGTGTAGAATTGTTTGTGGATTTGGCAATGTCTTGTGTAGAAGAACTAAGGGATAAAAGACCAAGAATGGGGGAAGTGGTGAAACAGATAGAGAACATTATACAAATTGCTGCTTTGAACGCCGGTACTAATCCATTGTCCACTTCAGCAGCAAGTTATGAGGAATATGACTGTAAGGACAGCACCGAGGATGTTTACAGCAGACCCTTTGATTATAGTGGAGTTTTTGACGGATGA

Protein Analysis

878

Amino Acids

95.47

Weight (kDa)

4.95

Isoelectric Point (pI)

35.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 112 - 171 3.1e-06 Leucine rich repeat
Pkinase PF00069 622 - 715 1.3e-14 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 624 - 714 2.3e-16 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 719 - 828 1.5e-06 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 720 - 828 2.7e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1585
AccB1I GGYRCC 1 cut(s) 832
AccB7I CCANNNNNTGG 1 cut(s) 2378
AciI CCGC 1 cut(s) 228
AcoI YGGCCR 1 cut(s) 1897
AcsI RAATTY 5 cut(s) 742, 1003, 1494, 1588, 1914
AcuI CTGAAG 3 cut(s) 317, 950, 2529
AcyI GRCGYC 1 cut(s) 1582
AfaI GTAC 7 cut(s) 729, 762, 1045, 2016, 2316, 2348, 2527
AfiI CCNNNNNNNGG 7 cut(s) 186, 464, 604, 1320, 1429, 2378, 2468
AflIII ACRYGT 1 cut(s) 2232
AjiI CACGTC 1 cut(s) 2233
AjnI CCWGG 4 cut(s) 351, 547, 1278, 1899
AjuI GAANNNNNNNTTGG 2 cut(s) 442, 474
AleI CACNNNNGTG 1 cut(s) 866
Alw21I GWGCWC 4 cut(s) 1466, 1686, 1842, 2004
Alw26I GTCTC 4 cut(s) 242, 535, 1004, 1040
AlwNI CAGNNNCTG 1 cut(s) 271
Ama87I CYCGRG 1 cut(s) 604
AoxI GGCC 7 cut(s) 755, 826, 1276, 1897, 1927, 2035, 2279
ApeKI GCWGC 6 cut(s) 28, 59, 609, 684, 2510, 2549
ApoI RAATTY 5 cut(s) 742, 1003, 1494, 1588, 1914
AseI ATTAAT 1 cut(s) 944
Asp700I GAANNNNTTC 1 cut(s) 72
AspS9I GGNCC 8 cut(s) 292, 374, 446, 493, 755, 827, 1598, 1799
AsuC2I CCSGG 1 cut(s) 830
AsuHPI GGTGA 4 cut(s) 853, 1520, 2111, 2491
AvaI CYCGRG 1 cut(s) 604
AvaII GGWCC 6 cut(s) 292, 374, 446, 493, 1598, 1799
BaeGI GKGCMC 1 cut(s) 837
BalI TGGCCA 1 cut(s) 1899
BamHI GGATCC 2 cut(s) 1136, 2188
BanI GGYRCC 1 cut(s) 832
BanII GRGCYC 3 cut(s) 1466, 1842, 2004
BauI CACGAG 2 cut(s) 32, 2010
BbsI GAAGAC 1 cut(s) 1324
Bbv12I GWGCWC 4 cut(s) 1466, 1686, 1842, 2004
BbvI GCAGC 6 cut(s) 15, 71, 621, 696, 2497, 2561
BccI CCATC 5 cut(s) 158, 350, 943, 1510, 1850
BceAI ACGGC 2 cut(s) 41, 1680
BciT130I CCWGG 4 cut(s) 353, 549, 1280, 1901
BclI TGATCA 1 cut(s) 1510
BcnI CCSGG 1 cut(s) 830
BcoDI GTCTC 4 cut(s) 242, 535, 1004, 1040
BfaI CTAG 7 cut(s) 237, 473, 1157, 1328, 1574, 1794, 2274
BfmI CTRYAG 3 cut(s) 263, 1094, 1267
BglI GCCNNNNNGGC 1 cut(s) 2043
BglII AGATCT 1 cut(s) 1403
BisI GCNGC 6 cut(s) 29, 60, 610, 685, 2511, 2550
BlsI GCNGC 6 cut(s) 30, 61, 611, 686, 2512, 2551
Bme1390I CCNGG 5 cut(s) 353, 549, 830, 1280, 1901
Bme18I GGWCC 6 cut(s) 292, 374, 446, 493, 1598, 1799
BmeT110I CYCGRG 1 cut(s) 604
BmgBI CACGTC 1 cut(s) 2233
BmgT120I GGNCC 8 cut(s) 292, 374, 446, 493, 755, 827, 1598, 1799
BmiI GGNNCC 5 cut(s) 834, 1060, 1138, 1600, 2190
BmrFI CCNGG 5 cut(s) 353, 549, 830, 1280, 1901
BmrI ACTGGG 2 cut(s) 169, 2186
BmsI GCATC 4 cut(s) 323, 696, 883, 1316
BmuI ACTGGG 2 cut(s) 169, 2186
BoxI GACNNNNGTC 1 cut(s) 1328
BpiI GAAGAC 1 cut(s) 1324
BpmI CTGGAG 3 cut(s) 740, 1480, 1653
BpuEI CTTGAG 3 cut(s) 966, 1826, 2145
BpuMI CCSGG 1 cut(s) 830
Bsa29I ATCGAT 1 cut(s) 1760
BsaHI GRCGYC 1 cut(s) 1582
BsaJI CCNNGG 2 cut(s) 1992, 2586
BsaWI WCCGGW 1 cut(s) 1505
Bsc4I CCNNNNNNNGG 7 cut(s) 186, 464, 604, 1320, 1429, 2378, 2468
Bse118I RCCGGY 1 cut(s) 2522
Bse1I ACTGG 5 cut(s) 164, 527, 685, 829, 2181
Bse3DI GCAATG 2 cut(s) 1107, 2433
BseBI CCWGG 4 cut(s) 353, 549, 1280, 1901
BseCI ATCGAT 1 cut(s) 1760
BseDI CCNNGG 2 cut(s) 1992, 2586
BseGI GGATG 8 cut(s) 112, 169, 361, 687, 1366, 1450, 1502, 2596
BseLI CCNNNNNNNGG 7 cut(s) 186, 464, 604, 1320, 1429, 2378, 2468
BseMI GCAATG 2 cut(s) 1107, 2433
BseMII CTCAG 4 cut(s) 115, 249, 787, 1436
BseNI ACTGG 5 cut(s) 164, 527, 685, 829, 2181
BseRI GAGGAG 2 cut(s) 1747, 1989
BseSI GKGCMC 1 cut(s) 837
BseXI GCAGC 6 cut(s) 15, 71, 621, 696, 2497, 2561
BsgI GTGCAG 3 cut(s) 528, 785, 1230
BshFI GGCC 7 cut(s) 757, 828, 1278, 1899, 1929, 2037, 2281
BshNI GGYRCC 1 cut(s) 832
BshVI ATCGAT 1 cut(s) 1760
BsiHKAI GWGCWC 4 cut(s) 1466, 1686, 1842, 2004
BsiHKCI CYCGRG 1 cut(s) 604
BsiSI CCGG 3 cut(s) 830, 1506, 2523
BslFI GGGAC 7 cut(s) 315, 553, 962, 984, 1593, 2123, 2185
BslI CCNNNNNNNGG 7 cut(s) 186, 464, 604, 1320, 1429, 2378, 2468
BsmAI GTCTC 4 cut(s) 242, 535, 1004, 1040
BsmBI CGTCTC 1 cut(s) 242
BsmFI GGGAC 7 cut(s) 315, 553, 962, 984, 1593, 2123, 2185
BsmI GAATGC 1 cut(s) 612
BsnI GGCC 7 cut(s) 757, 828, 1278, 1899, 1929, 2037, 2281
BsoBI CYCGRG 1 cut(s) 604
Bsp1286I GDGCHC 5 cut(s) 837, 1466, 1686, 1842, 2004
Bsp1407I TGTACA 1 cut(s) 2346
BspACI CCGC 1 cut(s) 228
BspANI GGCC 7 cut(s) 757, 828, 1278, 1899, 1929, 2037, 2281
BspCNI CTCAG 4 cut(s) 114, 250, 786, 1437
BspDI ATCGAT 1 cut(s) 1760
BspLI GGNNCC 5 cut(s) 834, 1060, 1138, 1600, 2190
BspMAI CTGCAG 1 cut(s) 1098
BspQI GCTCTTC 1 cut(s) 1830
BspT107I GGYRCC 1 cut(s) 832
BsrDI GCAATG 2 cut(s) 1107, 2433
BsrFI RCCGGY 1 cut(s) 2522
BsrGI TGTACA 1 cut(s) 2346
BsrI ACTGG 5 cut(s) 164, 527, 685, 829, 2181
BssAI RCCGGY 1 cut(s) 2522
BssECI CCNNGG 2 cut(s) 1992, 2586
BssNI GRCGYC 1 cut(s) 1582
BssSI CACGAG 2 cut(s) 32, 2010
Bst2BI CACGAG 2 cut(s) 32, 2010
Bst2UI CCWGG 4 cut(s) 353, 549, 1280, 1901
Bst4CI ACNGT 9 cut(s) 73, 346, 627, 1015, 1034, 1211, 1298, 2214, 2573
Bst6I CTCTTC 3 cut(s) 1413, 1724, 1830
BstACI GRCGYC 1 cut(s) 1582
BstAUI TGTACA 1 cut(s) 2346
BstC8I GCNNGC 2 cut(s) 230, 1264
BstDEI CTNAG 6 cut(s) 101, 258, 773, 1445, 1559, 2447
BstF5I GGATG 8 cut(s) 112, 169, 361, 687, 1366, 1450, 1502, 2596
BstMAI GTCTC 4 cut(s) 242, 535, 1004, 1040
BstMWI GCNNNNNNNGC 4 cut(s) 1118, 2043, 2287, 2519
BstNI CCWGG 4 cut(s) 353, 549, 1280, 1901
BstPAI GACNNNNGTC 1 cut(s) 1328
BstSCI CCNGG 5 cut(s) 351, 547, 828, 1278, 1899
BstSFI CTRYAG 3 cut(s) 263, 1094, 1267
BstSLI GKGCMC 1 cut(s) 837
BstV1I GCAGC 6 cut(s) 15, 71, 621, 696, 2497, 2561
BstV2I GAAGAC 1 cut(s) 1324
BstX2I RGATCY 6 cut(s) 145, 395, 1136, 1403, 1883, 2188
BstYI RGATCY 6 cut(s) 145, 395, 1136, 1403, 1883, 2188
Bsu15I ATCGAT 1 cut(s) 1760
BsuRI GGCC 7 cut(s) 757, 828, 1278, 1899, 1929, 2037, 2281
BsuTUI ATCGAT 1 cut(s) 1760
BtrI CACGTC 1 cut(s) 2233
BtsCI GGATG 8 cut(s) 112, 169, 361, 687, 1366, 1450, 1502, 2596
BtsI GCAGTG 2 cut(s) 192, 1795
BtsIMutI CAGTG 6 cut(s) 192, 1020, 1442, 1795, 2143, 2174
Cac8I GCNNGC 2 cut(s) 230, 1264
CaiI CAGNNNCTG 1 cut(s) 271
Cfr10I RCCGGY 1 cut(s) 2522
Cfr13I GGNCC 8 cut(s) 292, 374, 446, 493, 755, 827, 1598, 1799
ClaI ATCGAT 1 cut(s) 1760
CseI GACGC 1 cut(s) 885
CsiI ACCWGGT 1 cut(s) 547
Csp6I GTAC 7 cut(s) 728, 761, 1044, 2015, 2315, 2347, 2526
CviAII CATG 3 cut(s) 214, 850, 1195
CviQI GTAC 7 cut(s) 728, 761, 1044, 2015, 2315, 2347, 2526
DdeI CTNAG 6 cut(s) 101, 258, 773, 1445, 1559, 2447
DraI TTTAAA 1 cut(s) 402
EaeI YGGCCR 1 cut(s) 1897
Eam1104I CTCTTC 3 cut(s) 1413, 1724, 1830
EarI CTCTTC 3 cut(s) 1413, 1724, 1830
Ecl136II GAGCTC 3 cut(s) 1464, 1840, 2002
Eco24I GRGCYC 3 cut(s) 1466, 1842, 2004
Eco47I GGWCC 6 cut(s) 292, 374, 446, 493, 1598, 1799
Eco53kI GAGCTC 3 cut(s) 1464, 1840, 2002
Eco57I CTGAAG 3 cut(s) 317, 950, 2529
Eco88I CYCGRG 1 cut(s) 604
EcoICRI GAGCTC 3 cut(s) 1464, 1840, 2002
EcoO109I RGGNCCY 1 cut(s) 292
EcoRI GAATTC 1 cut(s) 1914
EcoRII CCWGG 4 cut(s) 351, 547, 1278, 1899
EcoT38I GRGCYC 3 cut(s) 1466, 1842, 2004
Esp3I CGTCTC 1 cut(s) 242
FaeI CATG 3 cut(s) 217, 853, 1198
FaqI GGGAC 7 cut(s) 315, 553, 962, 984, 1593, 2123, 2185
FatI CATG 3 cut(s) 213, 849, 1194
FauI CCCGC 1 cut(s) 221
FbaI TGATCA 1 cut(s) 1510
Fnu4HI GCNGC 6 cut(s) 29, 60, 610, 685, 2511, 2550
FokI GGATG 8 cut(s) 119, 176, 368, 674, 1373, 1437, 1489, 2603
FriOI GRGCYC 3 cut(s) 1466, 1842, 2004
Fsp4HI GCNGC 6 cut(s) 29, 60, 610, 685, 2511, 2550
FspBI CTAG 7 cut(s) 237, 473, 1157, 1328, 1574, 1794, 2274
GluI GCNGC 6 cut(s) 29, 60, 610, 685, 2511, 2550
GsuI CTGGAG 3 cut(s) 740, 1480, 1653
HaeIII GGCC 7 cut(s) 757, 828, 1278, 1899, 1929, 2037, 2281
HapII CCGG 3 cut(s) 830, 1506, 2523
HgaI GACGC 1 cut(s) 885
Hin1I GRCGYC 1 cut(s) 1582
Hin1II CATG 3 cut(s) 217, 853, 1198
HincII GTYRAC 2 cut(s) 1162, 2217
HindII GTYRAC 2 cut(s) 1162, 2217
HpaII CCGG 3 cut(s) 830, 1506, 2523
HphI GGTGA 4 cut(s) 853, 1520, 2111, 2491
Hpy166II GTNNAC 4 cut(s) 1162, 2217, 2541, 2596
Hpy8I GTNNAC 4 cut(s) 1162, 2217, 2541, 2596
Hpy99I CGWCG 1 cut(s) 2234
HpyAV CCTTC 6 cut(s) 292, 468, 702, 1007, 1433, 2271
HpyCH4III ACNGT 9 cut(s) 73, 346, 627, 1015, 1034, 1211, 1298, 2214, 2573
HpyCH4IV ACGT 3 cut(s) 251, 1582, 2232
HpyF10VI GCNNNNNNNGC 4 cut(s) 1118, 2043, 2287, 2519
HpyF3I CTNAG 6 cut(s) 101, 258, 773, 1445, 1559, 2447
HpySE526I ACGT 3 cut(s) 251, 1582, 2232
Hsp92I GRCGYC 1 cut(s) 1582
Hsp92II CATG 3 cut(s) 217, 853, 1198
Ksp22I TGATCA 1 cut(s) 1510
LguI GCTCTTC 1 cut(s) 1830
LmnI GCTCC 5 cut(s) 1461, 1689, 1814, 2007, 2260
Lsp1109I GCAGC 6 cut(s) 15, 71, 621, 696, 2497, 2561
LweI GCATC 4 cut(s) 323, 696, 883, 1316
MabI ACCWGGT 1 cut(s) 547
MaeI CTAG 7 cut(s) 237, 473, 1157, 1328, 1574, 1794, 2274
MaeII ACGT 3 cut(s) 251, 1582, 2232
MaeIII GTNAC 2 cut(s) 10, 239
MboII GAAGA 7 cut(s) 1111, 1324, 1400, 1741, 1847, 1910, 2453
MfeI CAATTG 4 cut(s) 318, 1076, 1125, 1668
MflI RGATCY 6 cut(s) 145, 395, 1136, 1403, 1883, 2188
MhlI GDGCHC 5 cut(s) 837, 1466, 1686, 1842, 2004
MlsI TGGCCA 1 cut(s) 1899
MluNI TGGCCA 1 cut(s) 1899
MlyI GAGTC 7 cut(s) 18, 1192, 1318, 1456, 1579, 1754, 2200
MmeI TCCRAC 4 cut(s) 834, 1164, 1946, 2238
Mox20I TGGCCA 1 cut(s) 1899
MroXI GAANNNNTTC 1 cut(s) 72
MscI TGGCCA 1 cut(s) 1899
MseI TTAA 8 cut(s) 38, 200, 401, 563, 749, 944, 1944, 2166
MslI CAYNNNNRTG 1 cut(s) 866
Msp20I TGGCCA 1 cut(s) 1899
MspI CCGG 3 cut(s) 830, 1506, 2523
MspR9I CCNGG 5 cut(s) 353, 549, 830, 1280, 1901
MunI CAATTG 4 cut(s) 318, 1076, 1125, 1668
Mva1269I GAATGC 1 cut(s) 612
MvaI CCWGG 4 cut(s) 353, 549, 1280, 1901
MwoI GCNNNNNNNGC 4 cut(s) 1118, 2043, 2287, 2519
NciI CCSGG 1 cut(s) 830
NlaIII CATG 3 cut(s) 217, 853, 1198
NlaIV GGNNCC 5 cut(s) 834, 1060, 1138, 1600, 2190
NmeAIII GCCGAG 1 cut(s) 2017
NmuCI GTSAC 2 cut(s) 10, 239
OliI CACNNNNGTG 1 cut(s) 866
PciSI GCTCTTC 1 cut(s) 1830
PctI GAATGC 1 cut(s) 612
PdmI GAANNNNTTC 1 cut(s) 72
PflMI CCANNNNNTGG 1 cut(s) 2378
PfoI TCCNGGA 1 cut(s) 351
PkrI GCNGC 6 cut(s) 30, 61, 611, 686, 2512, 2551
PleI GAGTC 7 cut(s) 17, 1191, 1318, 1455, 1578, 1753, 2200
PpsI GAGTC 7 cut(s) 17, 1191, 1318, 1455, 1578, 1753, 2200
PpuMI RGGWCCY 1 cut(s) 292
PshAI GACNNNNGTC 1 cut(s) 1328
PshBI ATTAAT 1 cut(s) 944
Psp124BI GAGCTC 3 cut(s) 1466, 1842, 2004
Psp5II RGGWCCY 1 cut(s) 292
Psp6I CCWGG 4 cut(s) 351, 547, 1278, 1899
PspGI CCWGG 4 cut(s) 351, 547, 1278, 1899
PspN4I GGNNCC 5 cut(s) 834, 1060, 1138, 1600, 2190
PspPI GGNCC 8 cut(s) 292, 374, 446, 493, 755, 827, 1598, 1799
PspPPI RGGWCCY 1 cut(s) 292
PstI CTGCAG 1 cut(s) 1098
PstNI CAGNNNCTG 1 cut(s) 271
PsuI RGATCY 6 cut(s) 145, 395, 1136, 1403, 1883, 2188
RsaI GTAC 7 cut(s) 729, 762, 1045, 2016, 2316, 2348, 2527
RsaNI GTAC 7 cut(s) 728, 761, 1044, 2015, 2315, 2347, 2526
RseI CAYNNNNRTG 1 cut(s) 866
SacI GAGCTC 3 cut(s) 1466, 1842, 2004
SapI GCTCTTC 1 cut(s) 1830
SaqAI TTAA 8 cut(s) 38, 200, 401, 563, 749, 944, 1944, 2166
SatI GCNGC 6 cut(s) 29, 60, 610, 685, 2511, 2550
Sau96I GGNCC 8 cut(s) 292, 374, 446, 493, 755, 827, 1598, 1799
SchI GAGTC 7 cut(s) 18, 1192, 1318, 1456, 1579, 1754, 2200
ScrFI CCNGG 5 cut(s) 353, 549, 830, 1280, 1901
SduI GDGCHC 5 cut(s) 837, 1466, 1686, 1842, 2004
SexAI ACCWGGT 1 cut(s) 547
SfaNI GCATC 4 cut(s) 323, 696, 883, 1316
SfcI CTRYAG 3 cut(s) 263, 1094, 1267
SinI GGWCC 6 cut(s) 292, 374, 446, 493, 1598, 1799
SmiMI CAYNNNNRTG 1 cut(s) 866
SmlI CTYRAG 4 cut(s) 15, 981, 1841, 2160
SmoI CTYRAG 4 cut(s) 15, 981, 1841, 2160
SsiI CCGC 1 cut(s) 228
SspI AATATT 3 cut(s) 1066, 2073, 2198
SspMI CTAG 7 cut(s) 237, 473, 1157, 1328, 1574, 1794, 2274
SstI GAGCTC 3 cut(s) 1466, 1842, 2004
StyD4I CCNGG 5 cut(s) 351, 547, 828, 1278, 1899
TaaI ACNGT 9 cut(s) 73, 346, 627, 1015, 1034, 1211, 1298, 2214, 2573
TaiI ACGT 3 cut(s) 254, 1585, 2235
TaqI TCGA 5 cut(s) 7, 246, 1235, 1760, 2336
TatI WGTACW 2 cut(s) 2014, 2346
Tru1I TTAA 8 cut(s) 38, 200, 401, 563, 749, 944, 1944, 2166
Tru9I TTAA 8 cut(s) 38, 200, 401, 563, 749, 944, 1944, 2166
TscAI CASTG 6 cut(s) 199, 1020, 1449, 1795, 2143, 2181
TseFI GTSAC 2 cut(s) 10, 239
TseI GCWGC 6 cut(s) 28, 59, 609, 684, 2510, 2549
Tsp45I GTSAC 2 cut(s) 10, 239
TspDTI ATGAA 5 cut(s) 123, 572, 735, 1680, 2365
TspGWI ACGGA 2 cut(s) 202, 1336
TspRI CASTG 6 cut(s) 199, 1020, 1449, 1795, 2143, 2181
Van91I CCANNNNNTGG 1 cut(s) 2378
VpaK11BI GGWCC 6 cut(s) 292, 374, 446, 493, 1598, 1799
VspI ATTAAT 1 cut(s) 944
XapI RAATTY 5 cut(s) 742, 1003, 1494, 1588, 1914
XbaI TCTAGA 1 cut(s) 1573
XmnI GAANNNNTTC 1 cut(s) 72
XspI CTAG 7 cut(s) 237, 473, 1157, 1328, 1574, 1794, 2274
ZraI GACGTC 1 cut(s) 1583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.