RLG00000034112

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000487
Physical Location & Seq
Reverse (-)
36899769 .. 36905014
5246 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034112

Sequence Viewer

Length: 2742 bp
ATGGATCGAGCCACTCAAGTATTACGGCTGCTCGTGTTAATCCCATTGTTTGTTATTGCAGCAGAGGGAACTGTTCAGGAGTATAATGCTATTATGATACTCAGAGATGAATGGGGCATAAACCCTCCAAGTTGGGTTGGTTCAGATCCTTGTGGTGACTGGGATGGTATTACTTGCACCAATTCACGGATCACTGCTTTAACATTGGCAGACATGGGTTTGAAAGGCGGGCTACCTAGTGACATCGAGACGTTATCTGAGCTACAGATTCTGAATCTGGCTTTCAACGAGGACCTGAAGGGACAACTTCAAGCATCAATTGGAAACTTGACCAAACTAAATACCGTAATCCTGGATGGTTGCAGATTCTCTGGTCCTATTCCAGCTACAATAGGATCTTTAAAGCAACTTTCTTATCTATCTCTGAAAAACAATAGATTTAGTGGTCCAATTCCACCTTCCATTGGCAATCTAGCCAATCTTGTCTTTCTGGACCTATCGGACAACAGGCTTGGGGATTCCATTCCAGTCTCTAATGGAACTGCACCTGGTCTTGATATGTTAAATAAAACAAAGCACTTTCATTTTTCAAATAACCAGCTCTCGGGCAGCATTCCACCTCAACTGTTCAGCTCAAATATGCCTCTGATACATTTACGCCTTGATAGAAACTCATTAAGTGGGCCTGTTCCTACGAGCCTCACAAATCTTACAAATGTGTCTGAACTGCACTTGTCCAACAATAAGCTGACTGGCCCGGTGCCCAACCTTACTCTCATGGATTCCCTCACCTATGTGGATATGAGCAATAATTCTTTTGATGCGTCAGATATTCCTAATTGGTTTTCAACCTTGAAGTTCTTGACAACATTAATGATGGAAAACACAGGACTTCAGGGACAAGTCCCTCAAGCCCTTTTCAGCCTTCAAAATTTGGAGACTGTGATACTGAAGAACAACAGTCTGAATGGTACATTGGCTATTGGAACCAATATTGGCAACCAATTACACCTAATTGATCTGCAGAAGAACAACATTGCTGATCTTGCACCAATTGATGAGGGATCCAACTACACATTGATTCTAGTTGACAATCCAGTTTGTGAGGGGAGTCAGAATAACATGGCAAAGAACTACTGTAATGGTTCTCCTACTAATTCCTCGATTTCAACTACACCAAGTAATTGTGCTGCCTGTAGTTCCGGCCAGGTTGCTTCCCCCAACTGTAAATGTGCATCTCCCTATACACGGACTCTAGTCTTCTTATTTGTTTCTTTCTCAAACTTGGATGACAATAATTATTACAAAGCTTTCTCAGACAATCTCACAAGATCTCTTCAGTCCAAAAACCTTCCTGTGGATTCAGTTTCACTGAGTCATCCGATCTGGAGCACATCTTATCAACTTGAAATTATCATAGAAATTTTCCCATCCAGTGATCAAGTTAACTTCAACCAAACAGAAAGTTCGGCGATTACATCTGTTCTTAGCAACCAGAGTCTAGAGGGACGTCCAAATTCTTTTGGACCCTACTCTTTTCTTGTTCTTTACACCAACACTGGAGGATCAAACAAGGGTGTGATAATTGGAACGGCAATTGGTGGTTCTGTGCTCCTTACATTATTAGTCCTTGTAGGGCTTTATGCTCTCCACCAGAAGAGGAAAGCAGATGAGTCAATGAGTGGATCGATCCTTTTGACAGGGATTCCAAATAGCAGTGCTAGTGGTCCTCAGCTAAAAGGAGCAAGATTGTTCTCATTTGAAGAGCTCAAGAAATGCACCAATGGTTTTTCAAAAGCAAATGATATTGGATCTGGGGGTTATGGCCAGGTGTATAAGGGAATTCTTCCAACAGGCCAAGTGGTTGCCATTAAAAGATCTAAACGGGAATCTATGCAGGGAGGAGTTGAGTTCAAAGCCGAGATTGAGCTCCTATCACGAGTACATCATAAGAATCTTGTTGGCCTTGTAGGCTTTTGTTTTGAGCAAGGAGAACAAATATTGGTATATGAGTATGTTCCAAATGGTGATTTGAGGGACAGCCTTTCAGGGAAGTCCGGAATCAGGTTGGACTGGATGAGAAGACTTCACGTAGCACTTGGTGCAGCAAGAGGTCTGGCATATCTTCATGAACATGCAAACCCAACCATTATACACCGGGACATCAAATCAAACAACATATTACTCGATAAAGATTTAAATGCAAAAGTTGCTGATTTTGGTCTCTCCAAGTCAATTGCTGATAGTGGAATGGATCACTTATCTACTCAAGTTAAAGGGACACTGGGCTACTTGGATCCTGAATATTTTATGACTCAGCAGTTGACTGACAAGAGCGACGTGTATAGCTTTGGTGTGGTAATGTTGGAGCTGATAACTGCTAGAAGGCCAATAATGCAAGGGAATTATATAGTGAGAGTGGTACAGATGACAATGGATAAATCAAAAGATTTGTACAACCTTGATGACATTCTTGATCCATTAATTGGTTTAGGAACAAAGCTGAAAGGTGTAGAAATGTTTGTGGATTTGGCAATGTCTTGTGTTGAAGAATTAAGGGATAAAAGACCAAGAATGGGGGAAGTGGTGAAACAGATAGAGAACATTATACAGATTGCTGATTTGAACGCCGGTACTAATCCATTGTCCACTTCAGCAAGTTATGAGGAATATGACTGTAAGGACAGCACCGAGGATGTTTACAGCAGACCCTTTGATTATAGTGGAGTTTTTGATGGATGA

Protein Analysis

914

Amino Acids

99.46

Weight (kDa)

5.3

Isoelectric Point (pI)

33.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 112 - 171 8.3e-06 Leucine rich repeat
Pkinase PF00069 598 - 864 1.2e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 600 - 865 9.1e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1513
AccB1I GGYRCC 1 cut(s) 760
AccB7I CCANNNNNTGG 1 cut(s) 2486
AccIII TCCGGA 1 cut(s) 2057
AciI CCGC 1 cut(s) 228
AcoI YGGCCR 2 cut(s) 1204, 1825
AcsI RAATTY 4 cut(s) 931, 1422, 1516, 1842
AcuI CTGAAG 5 cut(s) 317, 878, 971, 1322, 2637
AcyI GRCGYC 1 cut(s) 1510
AdeI CACNNNGTG 1 cut(s) 2102
AfaI GTAC 5 cut(s) 973, 1944, 2424, 2456, 2635
AfiI CCNNNNNNNGG 8 cut(s) 186, 464, 604, 1248, 1357, 2064, 2486, 2576
AflIII ACRYGT 1 cut(s) 2340
AjiI CACGTC 1 cut(s) 2341
AjnI CCWGG 4 cut(s) 351, 547, 1206, 1827
AjuI GAANNNNNNNTTGG 4 cut(s) 442, 474, 959, 991
AleI CACNNNNGTG 1 cut(s) 794
Alw21I GWGCWC 4 cut(s) 1394, 1614, 1770, 1932
Alw26I GTCTC 4 cut(s) 242, 535, 932, 2228
AlwNI CAGNNNCTG 1 cut(s) 271
Ama87I CYCGRG 1 cut(s) 604
Aor13HI TCCGGA 1 cut(s) 2057
AoxI GGCC 7 cut(s) 683, 754, 1204, 1825, 1855, 1963, 2387
ApeKI GCWGC 5 cut(s) 28, 59, 609, 1190, 2105
ApoI RAATTY 4 cut(s) 931, 1422, 1516, 1842
AseI ATTAAT 2 cut(s) 872, 2483
AspS9I GGNCC 8 cut(s) 292, 374, 446, 493, 683, 755, 1526, 1727
AsuC2I CCSGG 2 cut(s) 758, 2159
AsuHPI GGTGA 4 cut(s) 167, 781, 2039, 2599
AvaI CYCGRG 1 cut(s) 604
AvaII GGWCC 6 cut(s) 292, 374, 446, 493, 1526, 1727
BaeGI GKGCMC 1 cut(s) 765
BalI TGGCCA 1 cut(s) 1827
BamHI GGATCC 2 cut(s) 1064, 2296
BanI GGYRCC 1 cut(s) 760
BanII GRGCYC 2 cut(s) 1770, 1932
BauI CACGAG 2 cut(s) 32, 1938
BbsI GAAGAC 2 cut(s) 1252, 2089
Bbv12I GWGCWC 4 cut(s) 1394, 1614, 1770, 1932
BbvCI CCTCAGC 1 cut(s) 1731
BbvI GCAGC 5 cut(s) 15, 71, 621, 1177, 2117
BccI CCATC 5 cut(s) 158, 350, 871, 1438, 2729
BceAI ACGGC 2 cut(s) 41, 1608
BciT130I CCWGG 4 cut(s) 353, 549, 1208, 1829
BclI TGATCA 1 cut(s) 1438
BcnI CCSGG 2 cut(s) 758, 2159
BcoDI GTCTC 4 cut(s) 242, 535, 932, 2228
BfaI CTAG 7 cut(s) 237, 473, 1085, 1256, 1502, 1722, 2382
BfmI CTRYAG 3 cut(s) 263, 1022, 1195
BglI GCCNNNNNGGC 1 cut(s) 1971
BglII AGATCT 2 cut(s) 1331, 1877
BisI GCNGC 5 cut(s) 29, 60, 610, 1191, 2106
BlsI GCNGC 5 cut(s) 30, 61, 611, 1192, 2107
Bme1390I CCNGG 6 cut(s) 353, 549, 758, 1208, 1829, 2159
Bme18I GGWCC 6 cut(s) 292, 374, 446, 493, 1526, 1727
BmeT110I CYCGRG 1 cut(s) 604
BmgBI CACGTC 1 cut(s) 2341
BmgT120I GGNCC 8 cut(s) 292, 374, 446, 493, 683, 755, 1526, 1727
BmiI GGNNCC 5 cut(s) 762, 988, 1066, 1528, 2298
BmrFI CCNGG 6 cut(s) 353, 549, 758, 1208, 1829, 2159
BmrI ACTGGG 2 cut(s) 169, 2294
BmsI GCATC 3 cut(s) 323, 811, 1244
BmuI ACTGGG 2 cut(s) 169, 2294
BoxI GACNNNNGTC 1 cut(s) 1256
BpiI GAAGAC 2 cut(s) 1252, 2089
BpmI CTGGAG 2 cut(s) 1408, 1581
Bpu10I CCTNAGC 1 cut(s) 1731
BpuEI CTTGAG 3 cut(s) 894, 1754, 2253
BpuMI CCSGG 2 cut(s) 758, 2159
Bsa29I ATCGAT 1 cut(s) 1688
BsaAI YACGTR 1 cut(s) 2092
BsaHI GRCGYC 1 cut(s) 1510
BsaI GGTCTC 1 cut(s) 2228
BsaJI CCNNGG 1 cut(s) 2691
BsaWI WCCGGW 1 cut(s) 2057
Bsc4I CCNNNNNNNGG 8 cut(s) 186, 464, 604, 1248, 1357, 2064, 2486, 2576
Bse118I RCCGGY 1 cut(s) 2630
Bse1I ACTGG 8 cut(s) 164, 527, 757, 1097, 1434, 1564, 2078, 2289
Bse3DI GCAATG 2 cut(s) 1035, 2541
BseAI TCCGGA 1 cut(s) 2057
BseBI CCWGG 4 cut(s) 353, 549, 1208, 1829
BseCI ATCGAT 1 cut(s) 1688
BseDI CCNNGG 1 cut(s) 2691
BseGI GGATG 7 cut(s) 169, 361, 1294, 1378, 1430, 2082, 2701
BseLI CCNNNNNNNGG 8 cut(s) 186, 464, 604, 1248, 1357, 2064, 2486, 2576
BseMI GCAATG 2 cut(s) 1035, 2541
BseMII CTCAG 6 cut(s) 115, 249, 1329, 1364, 1745, 2330
BseNI ACTGG 8 cut(s) 164, 527, 757, 1097, 1434, 1564, 2078, 2289
BseRI GAGGAG 1 cut(s) 1917
BseSI GKGCMC 1 cut(s) 765
BseXI GCAGC 5 cut(s) 15, 71, 621, 1177, 2117
BsgI GTGCAG 3 cut(s) 528, 713, 2124
BshFI GGCC 7 cut(s) 685, 756, 1206, 1827, 1857, 1965, 2389
BshNI GGYRCC 1 cut(s) 760
BshVI ATCGAT 1 cut(s) 1688
BsiHKAI GWGCWC 4 cut(s) 1394, 1614, 1770, 1932
BsiHKCI CYCGRG 1 cut(s) 604
BsiSI CCGG 5 cut(s) 758, 1203, 2058, 2158, 2631
BslFI GGGAC 7 cut(s) 315, 890, 912, 1521, 2051, 2174, 2293
BslI CCNNNNNNNGG 8 cut(s) 186, 464, 604, 1248, 1357, 2064, 2486, 2576
BsmAI GTCTC 4 cut(s) 242, 535, 932, 2228
BsmBI CGTCTC 1 cut(s) 242
BsmFI GGGAC 7 cut(s) 315, 890, 912, 1521, 2051, 2174, 2293
BsmI GAATGC 1 cut(s) 612
BsnI GGCC 7 cut(s) 685, 756, 1206, 1827, 1857, 1965, 2389
Bso31I GGTCTC 1 cut(s) 2228
BsoBI CYCGRG 1 cut(s) 604
Bsp1286I GDGCHC 5 cut(s) 765, 1394, 1614, 1770, 1932
Bsp13I TCCGGA 1 cut(s) 2057
Bsp1407I TGTACA 1 cut(s) 2454
BspACI CCGC 1 cut(s) 228
BspANI GGCC 7 cut(s) 685, 756, 1206, 1827, 1857, 1965, 2389
BspCNI CTCAG 6 cut(s) 114, 250, 1328, 1365, 1744, 2329
BspDI ATCGAT 1 cut(s) 1688
BspEI TCCGGA 1 cut(s) 2057
BspHI TCATGA 1 cut(s) 2128
BspLI GGNNCC 5 cut(s) 762, 988, 1066, 1528, 2298
BspMAI CTGCAG 1 cut(s) 1026
BspQI GCTCTTC 1 cut(s) 1758
BspT107I GGYRCC 1 cut(s) 760
BspTNI GGTCTC 1 cut(s) 2228
BsrDI GCAATG 2 cut(s) 1035, 2541
BsrFI RCCGGY 1 cut(s) 2630
BsrGI TGTACA 1 cut(s) 2454
BsrI ACTGG 8 cut(s) 164, 527, 757, 1097, 1434, 1564, 2078, 2289
BssAI RCCGGY 1 cut(s) 2630
BssECI CCNNGG 1 cut(s) 2691
BssNI GRCGYC 1 cut(s) 1510
BssSI CACGAG 2 cut(s) 32, 1938
Bst2BI CACGAG 2 cut(s) 32, 1938
Bst2UI CCWGG 4 cut(s) 353, 549, 1208, 1829
Bst4CI ACNGT 8 cut(s) 73, 346, 627, 943, 962, 1139, 1226, 2678
Bst6I CTCTTC 3 cut(s) 1341, 1652, 1758
BstACI GRCGYC 1 cut(s) 1510
BstAPI GCANNNNNTGC 2 cut(s) 2102, 2210
BstAUI TGTACA 1 cut(s) 2454
BstBAI YACGTR 1 cut(s) 2092
BstC8I GCNNGC 1 cut(s) 230
BstDEI CTNAG 7 cut(s) 101, 258, 1315, 1373, 1487, 1731, 2316
BstF5I GGATG 7 cut(s) 169, 361, 1294, 1378, 1430, 2082, 2701
BstMAI GTCTC 4 cut(s) 242, 535, 932, 2228
BstMWI GCNNNNNNNGC 5 cut(s) 1046, 1971, 2102, 2210, 2395
BstNI CCWGG 4 cut(s) 353, 549, 1208, 1829
BstNSI RCATGY 1 cut(s) 2138
BstPAI GACNNNNGTC 1 cut(s) 1256
BstSCI CCNGG 6 cut(s) 351, 547, 756, 1206, 1827, 2157
BstSFI CTRYAG 3 cut(s) 263, 1022, 1195
BstSLI GKGCMC 1 cut(s) 765
BstV1I GCAGC 5 cut(s) 15, 71, 621, 1177, 2117
BstV2I GAAGAC 2 cut(s) 1252, 2089
BstX2I RGATCY 7 cut(s) 145, 395, 1064, 1331, 1811, 1877, 2296
BstYI RGATCY 7 cut(s) 145, 395, 1064, 1331, 1811, 1877, 2296
Bsu15I ATCGAT 1 cut(s) 1688
BsuRI GGCC 7 cut(s) 685, 756, 1206, 1827, 1857, 1965, 2389
BsuTUI ATCGAT 1 cut(s) 1688
BtrI CACGTC 1 cut(s) 2341
BtsCI GGATG 7 cut(s) 169, 361, 1294, 1378, 1430, 2082, 2701
BtsI GCAGTG 2 cut(s) 192, 1723
BtsIMutI CAGTG 6 cut(s) 192, 1370, 1441, 1557, 1723, 2282
Cac8I GCNNGC 1 cut(s) 230
CaiI CAGNNNCTG 1 cut(s) 271
CciI TCATGA 1 cut(s) 2128
Cfr10I RCCGGY 1 cut(s) 2630
Cfr13I GGNCC 8 cut(s) 292, 374, 446, 493, 683, 755, 1526, 1727
ClaI ATCGAT 1 cut(s) 1688
CseI GACGC 1 cut(s) 813
CsiI ACCWGGT 1 cut(s) 547
Csp6I GTAC 5 cut(s) 972, 1943, 2423, 2455, 2634
CviAII CATG 5 cut(s) 214, 778, 1123, 2129, 2135
CviQI GTAC 5 cut(s) 972, 1943, 2423, 2455, 2634
DdeI CTNAG 7 cut(s) 101, 258, 1315, 1373, 1487, 1731, 2316
DraI TTTAAA 2 cut(s) 402, 2199
DraIII CACNNNGTG 1 cut(s) 2102
EaeI YGGCCR 2 cut(s) 1204, 1825
Eam1104I CTCTTC 3 cut(s) 1341, 1652, 1758
EarI CTCTTC 3 cut(s) 1341, 1652, 1758
Ecl136II GAGCTC 2 cut(s) 1768, 1930
Eco24I GRGCYC 2 cut(s) 1770, 1932
Eco31I GGTCTC 1 cut(s) 2228
Eco47I GGWCC 6 cut(s) 292, 374, 446, 493, 1526, 1727
Eco53kI GAGCTC 2 cut(s) 1768, 1930
Eco57I CTGAAG 5 cut(s) 317, 878, 971, 1322, 2637
Eco88I CYCGRG 1 cut(s) 604
EcoICRI GAGCTC 2 cut(s) 1768, 1930
EcoO109I RGGNCCY 1 cut(s) 292
EcoRI GAATTC 1 cut(s) 1842
EcoRII CCWGG 4 cut(s) 351, 547, 1206, 1827
EcoT38I GRGCYC 2 cut(s) 1770, 1932
Esp3I CGTCTC 1 cut(s) 242
FaeI CATG 5 cut(s) 217, 781, 1126, 2132, 2138
FaqI GGGAC 7 cut(s) 315, 890, 912, 1521, 2051, 2174, 2293
FatI CATG 5 cut(s) 213, 777, 1122, 2128, 2134
FauI CCCGC 1 cut(s) 221
FbaI TGATCA 1 cut(s) 1438
Fnu4HI GCNGC 5 cut(s) 29, 60, 610, 1191, 2106
FokI GGATG 7 cut(s) 176, 368, 1301, 1365, 1417, 2089, 2708
FriOI GRGCYC 2 cut(s) 1770, 1932
Fsp4HI GCNGC 5 cut(s) 29, 60, 610, 1191, 2106
FspBI CTAG 7 cut(s) 237, 473, 1085, 1256, 1502, 1722, 2382
GluI GCNGC 5 cut(s) 29, 60, 610, 1191, 2106
GsuI CTGGAG 2 cut(s) 1408, 1581
HaeIII GGCC 7 cut(s) 685, 756, 1206, 1827, 1857, 1965, 2389
HapII CCGG 5 cut(s) 758, 1203, 2058, 2158, 2631
HgaI GACGC 1 cut(s) 813
Hin1I GRCGYC 1 cut(s) 1510
Hin1II CATG 5 cut(s) 217, 781, 1126, 2132, 2138
HincII GTYRAC 3 cut(s) 1090, 1447, 2325
HindII GTYRAC 3 cut(s) 1090, 1447, 2325
HindIII AAGCTT 1 cut(s) 1308
HpaI GTTAAC 1 cut(s) 1447
HpaII CCGG 5 cut(s) 758, 1203, 2058, 2158, 2631
HphI GGTGA 4 cut(s) 167, 781, 2039, 2599
Hpy166II GTNNAC 5 cut(s) 1090, 1447, 2325, 2649, 2701
Hpy8I GTNNAC 5 cut(s) 1090, 1447, 2325, 2649, 2701
Hpy99I CGWCG 1 cut(s) 2342
HpyAV CCTTC 5 cut(s) 292, 468, 935, 1361, 2379
HpyCH4III ACNGT 8 cut(s) 73, 346, 627, 943, 962, 1139, 1226, 2678
HpyCH4IV ACGT 4 cut(s) 251, 1510, 2091, 2340
HpyF10VI GCNNNNNNNGC 5 cut(s) 1046, 1971, 2102, 2210, 2395
HpyF3I CTNAG 7 cut(s) 101, 258, 1315, 1373, 1487, 1731, 2316
HpySE526I ACGT 4 cut(s) 251, 1510, 2091, 2340
Hsp92I GRCGYC 1 cut(s) 1510
Hsp92II CATG 5 cut(s) 217, 781, 1126, 2132, 2138
Kpn2I TCCGGA 1 cut(s) 2057
Ksp22I TGATCA 1 cut(s) 1438
KspAI GTTAAC 1 cut(s) 1447
LguI GCTCTTC 1 cut(s) 1758
LmnI GCTCC 5 cut(s) 1389, 1617, 1742, 1935, 2368
Lsp1109I GCAGC 5 cut(s) 15, 71, 621, 1177, 2117
LweI GCATC 3 cut(s) 323, 811, 1244
MabI ACCWGGT 1 cut(s) 547
MaeI CTAG 7 cut(s) 237, 473, 1085, 1256, 1502, 1722, 2382
MaeII ACGT 4 cut(s) 251, 1510, 2091, 2340
MaeIII GTNAC 2 cut(s) 155, 239
MfeI CAATTG 4 cut(s) 318, 1053, 1596, 2235
MflI RGATCY 7 cut(s) 145, 395, 1064, 1331, 1811, 1877, 2296
MhlI GDGCHC 5 cut(s) 765, 1394, 1614, 1770, 1932
MlsI TGGCCA 1 cut(s) 1827
MluNI TGGCCA 1 cut(s) 1827
MlyI GAGTC 6 cut(s) 1120, 1246, 1384, 1507, 1682, 2308
MmeI TCCRAC 5 cut(s) 762, 1092, 1874, 2049, 2346
Mox20I TGGCCA 1 cut(s) 1827
MroI TCCGGA 1 cut(s) 2057
MscI TGGCCA 1 cut(s) 1827
MslI CAYNNNNRTG 2 cut(s) 794, 2133
Msp20I TGGCCA 1 cut(s) 1827
MspI CCGG 5 cut(s) 758, 1203, 2058, 2158, 2631
MspR9I CCNGG 6 cut(s) 353, 549, 758, 1208, 1829, 2159
MunI CAATTG 4 cut(s) 318, 1053, 1596, 2235
Mva1269I GAATGC 1 cut(s) 612
MvaI CCWGG 4 cut(s) 353, 549, 1208, 1829
MwoI GCNNNNNNNGC 5 cut(s) 1046, 1971, 2102, 2210, 2395
NciI CCSGG 2 cut(s) 758, 2159
NlaIII CATG 5 cut(s) 217, 781, 1126, 2132, 2138
NlaIV GGNNCC 5 cut(s) 762, 988, 1066, 1528, 2298
NmeAIII GCCGAG 1 cut(s) 1945
NmuCI GTSAC 2 cut(s) 155, 239
NspI RCATGY 1 cut(s) 2138
OliI CACNNNNGTG 1 cut(s) 794
PagI TCATGA 1 cut(s) 2128
PciSI GCTCTTC 1 cut(s) 1758
PctI GAATGC 1 cut(s) 612
PflMI CCANNNNNTGG 1 cut(s) 2486
PfoI TCCNGGA 1 cut(s) 351
PkrI GCNGC 5 cut(s) 30, 61, 611, 1192, 2107
PleI GAGTC 6 cut(s) 1119, 1246, 1383, 1506, 1681, 2308
PpsI GAGTC 6 cut(s) 1119, 1246, 1383, 1506, 1681, 2308
Ppu21I YACGTR 1 cut(s) 2092
PpuMI RGGWCCY 1 cut(s) 292
PshAI GACNNNNGTC 1 cut(s) 1256
PshBI ATTAAT 2 cut(s) 872, 2483
Psp124BI GAGCTC 2 cut(s) 1770, 1932
Psp5II RGGWCCY 1 cut(s) 292
Psp6I CCWGG 4 cut(s) 351, 547, 1206, 1827
PspGI CCWGG 4 cut(s) 351, 547, 1206, 1827
PspN4I GGNNCC 5 cut(s) 762, 988, 1066, 1528, 2298
PspPI GGNCC 8 cut(s) 292, 374, 446, 493, 683, 755, 1526, 1727
PspPPI RGGWCCY 1 cut(s) 292
PstI CTGCAG 1 cut(s) 1026
PstNI CAGNNNCTG 1 cut(s) 271
PsuI RGATCY 7 cut(s) 145, 395, 1064, 1331, 1811, 1877, 2296
RsaI GTAC 5 cut(s) 973, 1944, 2424, 2456, 2635
RsaNI GTAC 5 cut(s) 972, 1943, 2423, 2455, 2634
RseI CAYNNNNRTG 2 cut(s) 794, 2133
SacI GAGCTC 2 cut(s) 1770, 1932
SapI GCTCTTC 1 cut(s) 1758
SatI GCNGC 5 cut(s) 29, 60, 610, 1191, 2106
Sau96I GGNCC 8 cut(s) 292, 374, 446, 493, 683, 755, 1526, 1727
SchI GAGTC 6 cut(s) 1120, 1246, 1384, 1507, 1682, 2308
ScrFI CCNGG 6 cut(s) 353, 549, 758, 1208, 1829, 2159
SduI GDGCHC 5 cut(s) 765, 1394, 1614, 1770, 1932
SexAI ACCWGGT 1 cut(s) 547
SfaNI GCATC 3 cut(s) 323, 811, 1244
SfcI CTRYAG 3 cut(s) 263, 1022, 1195
SinI GGWCC 6 cut(s) 292, 374, 446, 493, 1526, 1727
SmiI ATTTAAAT 1 cut(s) 2199
SmiMI CAYNNNNRTG 2 cut(s) 794, 2133
SmlI CTYRAG 4 cut(s) 15, 909, 1769, 2268
SmoI CTYRAG 4 cut(s) 15, 909, 1769, 2268
SsiI CCGC 1 cut(s) 228
SspI AATATT 3 cut(s) 994, 2001, 2306
SspMI CTAG 7 cut(s) 237, 473, 1085, 1256, 1502, 1722, 2382
SstI GAGCTC 2 cut(s) 1770, 1932
StyD4I CCNGG 6 cut(s) 351, 547, 756, 1206, 1827, 2157
SwaI ATTTAAAT 1 cut(s) 2199
TaaI ACNGT 8 cut(s) 73, 346, 627, 943, 962, 1139, 1226, 2678
TaiI ACGT 4 cut(s) 254, 1513, 2094, 2343
TaqI TCGA 5 cut(s) 7, 246, 1163, 1688, 2187
TatI WGTACW 2 cut(s) 1942, 2454
TscAI CASTG 6 cut(s) 199, 1377, 1441, 1564, 1723, 2289
TseFI GTSAC 2 cut(s) 155, 239
TseI GCWGC 5 cut(s) 28, 59, 609, 1190, 2105
Tsp45I GTSAC 2 cut(s) 155, 239
TspDTI ATGAA 4 cut(s) 123, 572, 2117, 2145
TspGWI ACGGA 2 cut(s) 202, 1264
TspRI CASTG 6 cut(s) 199, 1377, 1441, 1564, 1723, 2289
Van91I CCANNNNNTGG 1 cut(s) 2486
VpaK11BI GGWCC 6 cut(s) 292, 374, 446, 493, 1526, 1727
VspI ATTAAT 2 cut(s) 872, 2483
XapI RAATTY 4 cut(s) 931, 1422, 1516, 1842
XbaI TCTAGA 1 cut(s) 1501
XceI RCATGY 1 cut(s) 2138
XspI CTAG 7 cut(s) 237, 473, 1085, 1256, 1502, 1722, 2382
ZraI GACGTC 1 cut(s) 1511
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.