FvH4_3g23890

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000487
Physical Location & Seq
Reverse (-)
16989919 .. 16996636
6718 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g23890.t3

Sequence Viewer

Length: 2625 bp
ATGCAAGAGTGGGACATAAGGCCTCCAAGTTGGAAGAGTTCAGATCCTTGTGCTCATGGCTGGGAAGGTATTGACTGCACGAATTCACGTGTTACCTCCATAAAATTGGCAGGCATGGGTTTGAAAGGTCAGTTACCAGCCGATATCCAGTCGCTGAGCGAGATAGAGACACTGGACCTATCTTTGAATAAGGAGCTGACAGGACCAATTCCAACATCAATTGGAAACTTGACAAAACTAGTGAACTTAAACCTCGCTGGCTGCAGTTTCTATGGGCCTATTCCTCAAACTATAGGATCTCTGAAGCATCTATACTATCTAGATCTGAACAACAATAATTTGAGTGGGCAAATTCCGCCTTCAATTGGTAATCTTTCGGAGCTTAACTATCTGGACCTAACTAGCAACAAACTTGGAGGAAATATCCCAATCTCCAGTGAGACCACACTGGGTCTTGATATGTTACACAACGCGCAACATTTTCATTTAGGAAACAATCATTTCTCAGGAAGTATTCCAACTCAATTATTCAGCTCAAAGATGGCTCTGATGCATTTGCTCTTGGATAGAAATAATCTATCTGGCGAGATCCCTTCCACACTCGGACTGATGCAAAATCTGCAGACACTGCGCCTTGATTGGAATTTACTAAGTGGGCCGGTGCCTTTAAGCCTCAACAATCTTTCAAACATAGCTGTATTGTATTTGTCTAACAATCAGTTTGTTGGCCCGTTACCAGACCTTACCGGCATGAAGACCCTCAATTATGTGGATATGAGTAATAATACTTTTGATGTTTCAAAACTTCCTGACTGGTTTTCATCCTTGCCGTTCTTGACAACACTAGTGCTAAGGAATAACAATCTCAATGGCCTTTTGGATATTGATACCAATTACGGCAACCAGTTGCAGCTAATCGATTTGGAACAGAATTTCATTACTAATCTTAAACAATATGGAGGAACCAACTATAAATTAATACTTGTTGATAATCCAATTTGTAATCAGACAAACATGGAAAAGAATTATTGCATTGTCCCCCCATCAGATTCCTCTCCCTCAACACCACCAAATAACTGTGTGCCCGTTGTCTGTAGTTCGGGCAAAGTTTCCAGCCCGAATTGTAAATGTGCACATCCTTACACAGTAACTCTAGTCTTCTTATATATCAGTTTCTCAGACTTTGGAAACTCAACTTACTTCACAGCTCTAGAGATCTCTCTCATCCAATCTTTTTGGGATCACAACATTCCTGTGGATTCAGTTTCTCTGGATTCTCATTCCTTGGACTTGTTGGATTACCTTCACCTGGTCCTAGAAATTTTCCCATATGATCAAGATCGCTTCAACGAATCAGAAGCTTCAGCGCTTGTTTCTGTGCTTAACAACCAAACTCTTTCACGTCCCAAGTATTTTGGACCCTTCTTTGTTCAGTCTGGTTTACTATATTATGCTCAGCACAGAGGATCAAGAAAGGCCTTGATAATCGGTGCAGCAGTTGGTGGTTCTGTGCTTCTATTATTACTAGCACTGCTTCTGAGGGTTTATGCTCTACTACAAAAGAGAAGAGAAAATGGGCAATGGAACAGAGCAATCCCTTTGCAGGCTTGGATTTCAAGAAGCACTCTTCCTCAGTTAAAAGGAGCAAGACTGTTCTCTTTTAAAGAGCTTAAGGAGTGCACCAACAGTTTTTCAGAAGCAAATGATATTGGTTCCGGGGGTTATGGAAAGGTGTATCAGGCAGTGCTTCCAACAGGCGAAATGGTTGCTATTAAACGAGCTAAAAAGGAATCTATGCAGGGAGGGATTGAGTTCAAAGCTGAGGTTGAGCTGCTTTCGAGGGCACATCATAACAATCTTGTGAGCCTTCTTGGTTTTTGTTTGGAGCAAGATGAACAAATGTTGATATACCAGTATGTTCCAAATGGTAACTTGACGGATAGTCTTTCAGGGAAGTCTGGAGTTAGGTTGAATTGGATGAGGAGACTCAAAGTAGCTCTTGGCACAGCAAGAGGACTGGCCTATCTTCACGAGCATGCAACCCCTCCTATCATACACCGGGACATTAAACCAAACAACATCCTACTAGATAAAGATTTAAATGCAAAGGTTGCGGACTTTGGTCTCTCCAGGTCTATGGCTGGTAGTGACAGGGATCATGTGACTACTCAAGTTAAAGGGACAATGGGGTACTTGGATCCTGAATATTTCATGACTCAAGAATTGACTGAGAAGAGTGATGTTTATAGCTTTGGCGTGGTAATGTTGGAGCTGATTACTGCAAGAAGGCCGATAGAGCATGGGCAGTATATTGTGAGAGTGGTACAGATGAGAATGGATAAGACAAAAGTTTTGTACAACCTGCGCGATATTCTTGATCCAGCCATTGGTTTAGTAACAGAGCTGATAGGTCTAGAAATGTTTGTCGATTTGGCAATGCTGTGTGTAAAAGACATACGAGATAGAAGGCCTAGAATGGGGCAAGTAGTGAAAGAGATAGAGAACATTATAAATGTTGCTAGTTTTGATGCTGCTGCAAATTCACCATCCGCTTCAGCAGGTTATGAGGATGTGAGTAAGGTTGGTAGCGAGGATCCTTGCAGAGGTCATGTCCTGGAATATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

875

Amino Acids

96.98

Weight (kDa)

5.89

Isoelectric Point (pI)

35.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 367 - 581 1.9e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 370 - 586 1.2e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2510
Acc36I ACCTGC 2 cut(s) 2370, 2549
AccB1I GGYRCC 1 cut(s) 661
AccB7I CCANNNNNTGG 1 cut(s) 2387
AccII CGCG 2 cut(s) 473, 2367
AciI CCGC 3 cut(s) 356, 2114, 2550
AcsI RAATTY 6 cut(s) 82, 351, 643, 931, 1320, 2539
AcuI CTGAAG 3 cut(s) 323, 1347, 2538
AcvI CACGTG 1 cut(s) 89
AfaI GTAC 3 cut(s) 2192, 2325, 2357
AfeI AGCGCT 1 cut(s) 1368
AfiI CCNNNNNNNGG 6 cut(s) 365, 1309, 1603, 2387, 2477, 2603
AflII CTTAAG 1 cut(s) 1670
AflIII ACRYGT 1 cut(s) 88
AgsI TTSAA 9 cut(s) 124, 187, 363, 687, 801, 1348, 1617, 1816, 1972
AhdI GACNNNNNGTC 1 cut(s) 1941
AhlI ACTAGT 2 cut(s) 238, 844
AjiI CACGTC 1 cut(s) 1403
AjnI CCWGG 3 cut(s) 1308, 2129, 2613
Alw21I GWGCWC 3 cut(s) 55, 1135, 1682
Alw26I GTCTC 4 cut(s) 161, 434, 1978, 2129
Alw44I GTGCAC 2 cut(s) 1131, 1678
AlwNI CAGNNNCTG 2 cut(s) 154, 628
Aor51HI AGCGCT 1 cut(s) 1368
AoxI GGCC 9 cut(s) 20, 275, 656, 727, 871, 1476, 2019, 2288, 2468
ApaLI GTGCAC 2 cut(s) 1131, 1678
ApeKI GCWGC 6 cut(s) 261, 910, 1493, 1831, 2531, 2534
ApoI RAATTY 6 cut(s) 82, 351, 643, 931, 1320, 2539
ArsI GACNNNNNNTTYG 2 cut(s) 2335, 2367
AseI ATTAAT 1 cut(s) 977
AspLEI GCGC 4 cut(s) 475, 633, 1369, 2367
AspS9I GGNCC 8 cut(s) 175, 203, 275, 394, 656, 728, 1312, 1418
AsuC2I CCSGG 2 cut(s) 1717, 2060
AsuHPI GGTGA 2 cut(s) 1298, 2535
AvaII GGWCC 5 cut(s) 175, 203, 394, 1312, 1418
BaeGI GKGCMC 4 cut(s) 1086, 1135, 1682, 1846
BamHI GGATCC 2 cut(s) 2197, 2593
BanI GGYRCC 1 cut(s) 661
BarI GAAGNNNNNNTAC 2 cut(s) 296, 328
BauI CACGAG 1 cut(s) 2030
BbrPI CACGTG 1 cut(s) 89
BbsI GAAGAC 2 cut(s) 761, 1150
Bbv12I GWGCWC 3 cut(s) 55, 1135, 1682
BbvCI CCTCAGC 1 cut(s) 1821
BbvI GCAGC 6 cut(s) 248, 922, 1505, 1818, 2518, 2521
BccI CCATC 3 cut(s) 535, 1051, 2554
BceAI ACGGC 2 cut(s) 814, 913
BcgI CGANNNNNNTGC 2 cut(s) 1748, 1782
BciT130I CCWGG 3 cut(s) 1310, 2131, 2615
BclI TGATCA 1 cut(s) 1333
BcnI CCSGG 2 cut(s) 1717, 2060
BcoDI GTCTC 4 cut(s) 161, 434, 1978, 2129
BcuI ACTAGT 2 cut(s) 238, 844
BfmI CTRYAG 4 cut(s) 262, 291, 620, 1093
BfoI RGCGCY 1 cut(s) 1370
BfrI CTTAAG 1 cut(s) 1670
BfuAI ACCTGC 2 cut(s) 2370, 2549
BglII AGATCT 2 cut(s) 322, 1215
BisI GCNGC 6 cut(s) 262, 911, 1494, 1832, 2532, 2535
BlpI GCTNAGC 2 cut(s) 155, 1455
BlsI GCNGC 6 cut(s) 263, 912, 1495, 1833, 2533, 2536
Bme1390I CCNGG 5 cut(s) 1310, 1717, 2060, 2131, 2615
Bme18I GGWCC 5 cut(s) 175, 203, 394, 1312, 1418
BmeRI GACNNNNNGTC 1 cut(s) 1941
BmgBI CACGTC 1 cut(s) 1403
BmgT120I GGNCC 8 cut(s) 175, 203, 275, 394, 656, 728, 1312, 1418
BmiI GGNNCC 6 cut(s) 663, 964, 1420, 1714, 2199, 2595
BmrFI CCNGG 5 cut(s) 1310, 1717, 2060, 2131, 2615
BmrI ACTGGG 1 cut(s) 458
BmsI GCATC 4 cut(s) 316, 540, 600, 2518
BmuI ACTGGG 1 cut(s) 458
BoxI GACNNNNGTC 1 cut(s) 2121
BpiI GAAGAC 2 cut(s) 761, 1150
BpmI CTGGAG 3 cut(s) 418, 1980, 2113
Bpu10I CCTNAGC 2 cut(s) 851, 1821
Bpu1102I GCTNAGC 2 cut(s) 155, 1455
BpuEI CTTGAG 2 cut(s) 2154, 2202
BpuMI CCSGG 2 cut(s) 1717, 2060
Bsa29I ATCGAT 1 cut(s) 918
BsaAI YACGTR 1 cut(s) 89
BsaBI GATNNNNATC 1 cut(s) 1338
BsaI GGTCTC 2 cut(s) 434, 2129
BsaJI CCNNGG 2 cut(s) 1284, 1716
Bsc4I CCNNNNNNNGG 6 cut(s) 365, 1309, 1603, 2387, 2477, 2603
Bse118I RCCGGY 2 cut(s) 658, 746
Bse1I ACTGG 8 cut(s) 148, 177, 435, 453, 818, 904, 1912, 2022
Bse3DI GCAATG 2 cut(s) 1586, 2442
Bse8I GATNNNNATC 1 cut(s) 1338
BseBI CCWGG 3 cut(s) 1310, 2131, 2615
BseCI ATCGAT 1 cut(s) 918
BseDI CCNNGG 2 cut(s) 1284, 1716
BseGI GGATG 7 cut(s) 821, 1135, 1224, 1983, 2079, 2546, 2575
BseJI GATNNNNATC 1 cut(s) 1338
BseLI CCNNNNNNNGG 6 cut(s) 365, 1309, 1603, 2387, 2477, 2603
BseMI GCAATG 2 cut(s) 1586, 2442
BseMII CTCAG 8 cut(s) 146, 519, 1191, 1469, 1529, 1646, 1812, 2220
BseNI ACTGG 8 cut(s) 148, 177, 435, 453, 818, 904, 1912, 2022
BseRI GAGGAG 1 cut(s) 1996
BseSI GKGCMC 4 cut(s) 1086, 1135, 1682, 1846
BseXI GCAGC 6 cut(s) 248, 922, 1505, 1818, 2518, 2521
BseYI CCCAGC 1 cut(s) 60
BsgI GTGCAG 2 cut(s) 61, 1512
Bsh1236I CGCG 2 cut(s) 473, 2367
BshFI GGCC 9 cut(s) 22, 277, 658, 729, 873, 1478, 2021, 2290, 2470
BshNI GGYRCC 1 cut(s) 661
BshVI ATCGAT 1 cut(s) 918
BsiHKAI GWGCWC 3 cut(s) 55, 1135, 1682
BsiSI CCGG 4 cut(s) 659, 747, 1716, 2059
BslFI GGGAC 5 cut(s) 26, 1022, 1389, 2075, 2194
BslI CCNNNNNNNGG 6 cut(s) 365, 1309, 1603, 2387, 2477, 2603
BsmAI GTCTC 4 cut(s) 161, 434, 1978, 2129
BsmFI GGGAC 5 cut(s) 26, 1022, 1389, 2075, 2194
BsnI GGCC 9 cut(s) 22, 277, 658, 729, 873, 1478, 2021, 2290, 2470
Bso31I GGTCTC 2 cut(s) 434, 2129
Bsp1286I GDGCHC 5 cut(s) 55, 1086, 1135, 1682, 1846
Bsp1407I TGTACA 1 cut(s) 2355
Bsp1720I GCTNAGC 2 cut(s) 155, 1455
BspACI CCGC 3 cut(s) 356, 2114, 2550
BspANI GGCC 9 cut(s) 22, 277, 658, 729, 873, 1478, 2021, 2290, 2470
BspCNI CTCAG 8 cut(s) 147, 518, 1190, 1468, 1530, 1645, 1813, 2221
BspDI ATCGAT 1 cut(s) 918
BspFNI CGCG 2 cut(s) 473, 2367
BspHI TCATGA 1 cut(s) 2211
BspLI GGNNCC 6 cut(s) 663, 964, 1420, 1714, 2199, 2595
BspMAI CTGCAG 2 cut(s) 266, 624
BspMI ACCTGC 2 cut(s) 2370, 2549
BspT107I GGYRCC 1 cut(s) 661
BspTI CTTAAG 1 cut(s) 1670
BspTNI GGTCTC 2 cut(s) 434, 2129
BsrDI GCAATG 2 cut(s) 1586, 2442
BsrFI RCCGGY 2 cut(s) 658, 746
BsrGI TGTACA 1 cut(s) 2355
BsrI ACTGG 8 cut(s) 148, 177, 435, 453, 818, 904, 1912, 2022
BssAI RCCGGY 2 cut(s) 658, 746
BssECI CCNNGG 2 cut(s) 1284, 1716
BssSI CACGAG 1 cut(s) 2030
BssT1I CCWWGG 1 cut(s) 1284
Bst2BI CACGAG 1 cut(s) 2030
Bst2UI CCWGG 3 cut(s) 1310, 2131, 2615
Bst4CI ACNGT 4 cut(s) 1079, 1147, 1653, 1688
Bst6I CTCTTC 4 cut(s) 29, 1561, 1632, 2228
BstAFI CTTAAG 1 cut(s) 1670
BstAPI GCANNNNNTGC 3 cut(s) 619, 628, 2111
BstAUI TGTACA 1 cut(s) 2355
BstBAI YACGTR 1 cut(s) 89
BstC8I GCNNGC 4 cut(s) 112, 259, 1605, 2037
BstENI CCTNNNNNAGG 1 cut(s) 2601
BstF5I GGATG 7 cut(s) 821, 1135, 1224, 1983, 2079, 2546, 2575
BstFNI CGCG 2 cut(s) 473, 2367
BstH2I RGCGCY 1 cut(s) 1370
BstHHI GCGC 4 cut(s) 475, 633, 1369, 2367
BstMAI GTCTC 4 cut(s) 161, 434, 1978, 2129
BstMWI GCNNNNNNNGC 5 cut(s) 355, 619, 628, 2111, 2296
BstNI CCWGG 3 cut(s) 1310, 2131, 2615
BstNSI RCATGY 1 cut(s) 2039
BstPAI GACNNNNGTC 1 cut(s) 2121
BstSCI CCNGG 5 cut(s) 1308, 1715, 2058, 2129, 2613
BstSFI CTRYAG 4 cut(s) 262, 291, 620, 1093
BstSLI GKGCMC 4 cut(s) 1086, 1135, 1682, 1846
BstUI CGCG 2 cut(s) 473, 2367
BstV1I GCAGC 6 cut(s) 248, 922, 1505, 1818, 2518, 2521
BstV2I GAAGAC 2 cut(s) 761, 1150
BstX2I RGATCY 7 cut(s) 43, 296, 322, 588, 1215, 2197, 2593
BstXI CCANNNNNNTGG 2 cut(s) 106, 2137
BstYI RGATCY 7 cut(s) 43, 296, 322, 588, 1215, 2197, 2593
Bsu15I ATCGAT 1 cut(s) 918
BsuRI GGCC 9 cut(s) 22, 277, 658, 729, 873, 1478, 2021, 2290, 2470
BsuTUI ATCGAT 1 cut(s) 918
BtrI CACGTC 1 cut(s) 1403
BtsCI GGATG 7 cut(s) 821, 1135, 1224, 1983, 2079, 2546, 2575
BtsI GCAGTG 3 cut(s) 626, 1529, 1749
BtsIMutI CAGTG 6 cut(s) 170, 442, 446, 626, 1529, 1749
BveI ACCTGC 2 cut(s) 2370, 2549
Cac8I GCNNGC 4 cut(s) 112, 259, 1605, 2037
CaiI CAGNNNCTG 2 cut(s) 154, 628
CciI TCATGA 1 cut(s) 2211
CfoI GCGC 4 cut(s) 475, 633, 1369, 2367
Cfr10I RCCGGY 2 cut(s) 658, 746
Cfr13I GGNCC 8 cut(s) 175, 203, 275, 394, 656, 728, 1312, 1418
ClaI ATCGAT 1 cut(s) 918
CsiI ACCWGGT 1 cut(s) 1308
Csp6I GTAC 3 cut(s) 2191, 2324, 2356
CviAII CATG 9 cut(s) 56, 115, 751, 1015, 2036, 2159, 2212, 2300, 2609
CviQI GTAC 3 cut(s) 2191, 2324, 2356
DraI TTTAAA 2 cut(s) 1663, 2100
DriI GACNNNNNGTC 1 cut(s) 1941
Eam1104I CTCTTC 4 cut(s) 29, 1561, 1632, 2228
Eam1105I GACNNNNNGTC 1 cut(s) 1941
EarI CTCTTC 4 cut(s) 29, 1561, 1632, 2228
EciI GGCGGA 1 cut(s) 345
Eco130I CCWWGG 1 cut(s) 1284
Eco147I AGGCCT 3 cut(s) 22, 1478, 2470
Eco31I GGTCTC 2 cut(s) 434, 2129
Eco32I GATATC 1 cut(s) 145
Eco47I GGWCC 5 cut(s) 175, 203, 394, 1312, 1418
Eco47III AGCGCT 1 cut(s) 1368
Eco57I CTGAAG 3 cut(s) 323, 1347, 2538
Eco72I CACGTG 1 cut(s) 89
EcoNI CCTNNNNNAGG 1 cut(s) 2601
EcoRI GAATTC 1 cut(s) 82
EcoRII CCWGG 3 cut(s) 1308, 2129, 2613
EcoRV GATATC 1 cut(s) 145
EcoT14I CCWWGG 1 cut(s) 1284
EcoT22I ATGCAT 1 cut(s) 555
ErhI CCWWGG 1 cut(s) 1284
FaeI CATG 9 cut(s) 59, 118, 754, 1018, 2039, 2162, 2215, 2303, 2612
FalI AAGNNNNNCTT 2 cut(s) 1983, 2015
FaqI GGGAC 5 cut(s) 26, 1022, 1389, 2075, 2194
FatI CATG 9 cut(s) 55, 114, 750, 1014, 2035, 2158, 2211, 2299, 2608
FauNDI CATATG 1 cut(s) 1330
FbaI TGATCA 1 cut(s) 1333
Fnu4HI GCNGC 6 cut(s) 262, 911, 1494, 1832, 2532, 2535
FokI GGATG 7 cut(s) 808, 1122, 1211, 1990, 2066, 2533, 2582
Fsp4HI GCNGC 6 cut(s) 262, 911, 1494, 1832, 2532, 2535
GlaI GCGC 4 cut(s) 474, 632, 1368, 2366
GluI GCNGC 6 cut(s) 262, 911, 1494, 1832, 2532, 2535
GsaI CCCAGC 1 cut(s) 64
GsuI CTGGAG 3 cut(s) 418, 1980, 2113
HaeII RGCGCY 1 cut(s) 1370
HaeIII GGCC 9 cut(s) 22, 277, 658, 729, 873, 1478, 2021, 2290, 2470
HapII CCGG 4 cut(s) 659, 747, 1716, 2059
HhaI GCGC 4 cut(s) 475, 633, 1369, 2367
Hin1II CATG 9 cut(s) 59, 118, 754, 1018, 2039, 2162, 2215, 2303, 2612
Hin6I GCGC 4 cut(s) 473, 631, 1367, 2365
HinP1I GCGC 4 cut(s) 473, 631, 1367, 2365
HindIII AAGCTT 1 cut(s) 1359
HinfI GANTC 7 cut(s) 1049, 1259, 1274, 1352, 1790, 1986, 2215
HpaII CCGG 4 cut(s) 659, 747, 1716, 2059
HphI GGTGA 2 cut(s) 1298, 2535
Hpy166II GTNNAC 4 cut(s) 244, 1133, 1442, 1680
Hpy8I GTNNAC 4 cut(s) 244, 1133, 1442, 1680
HpyAV CCTTC 8 cut(s) 59, 369, 603, 1313, 1432, 1877, 2280, 2460
HpyCH4III ACNGT 4 cut(s) 1079, 1147, 1653, 1688
HpyCH4IV ACGT 2 cut(s) 88, 1402
HpyF10VI GCNNNNNNNGC 5 cut(s) 355, 619, 628, 2111, 2296
HpySE526I ACGT 2 cut(s) 88, 1402
Hsp92II CATG 9 cut(s) 59, 118, 754, 1018, 2039, 2162, 2215, 2303, 2612
HspAI GCGC 4 cut(s) 473, 631, 1367, 2365
Ksp22I TGATCA 1 cut(s) 1333
LmnI GCTCC 5 cut(s) 193, 379, 1643, 1885, 2269
Lsp1109I GCAGC 6 cut(s) 248, 922, 1505, 1818, 2518, 2521
LweI GCATC 4 cut(s) 316, 540, 600, 2518
MabI ACCWGGT 1 cut(s) 1308
MaeII ACGT 2 cut(s) 88, 1402
MaeIII GTNAC 9 cut(s) 91, 132, 462, 732, 1147, 1928, 2147, 2161, 2395
MboII GAAGA 7 cut(s) 46, 766, 1150, 1578, 1619, 2018, 2245
MfeI CAATTG 2 cut(s) 219, 363
MflI RGATCY 7 cut(s) 43, 296, 322, 588, 1215, 2197, 2593
MhlI GDGCHC 5 cut(s) 55, 1086, 1135, 1682, 1846
MlyI GAGTC 2 cut(s) 1980, 2209
MmeI TCCRAC 6 cut(s) 11, 236, 542, 1275, 1775, 2247
Mph1103I ATGCAT 1 cut(s) 555
MslI CAYNNNNRTG 2 cut(s) 1253, 2034
MspCI CTTAAG 1 cut(s) 1670
MspI CCGG 4 cut(s) 659, 747, 1716, 2059
MspR9I CCNGG 5 cut(s) 1310, 1717, 2060, 2131, 2615
MunI CAATTG 2 cut(s) 219, 363
MvaI CCWGG 3 cut(s) 1310, 2131, 2615
MvnI CGCG 2 cut(s) 473, 2367
MwoI GCNNNNNNNGC 5 cut(s) 355, 619, 628, 2111, 2296
NciI CCSGG 2 cut(s) 1717, 2060
NdeI CATATG 1 cut(s) 1330
NlaIII CATG 9 cut(s) 59, 118, 754, 1018, 2039, 2162, 2215, 2303, 2612
NlaIV GGNNCC 6 cut(s) 663, 964, 1420, 1714, 2199, 2595
NmuCI GTSAC 2 cut(s) 2147, 2161
NsiI ATGCAT 1 cut(s) 555
NspI RCATGY 1 cut(s) 2039
PaeI GCATGC 1 cut(s) 2039
PagI TCATGA 1 cut(s) 2211
PceI AGGCCT 3 cut(s) 22, 1478, 2470
PfeI GAWTC 5 cut(s) 1049, 1259, 1274, 1352, 1790
PflMI CCANNNNNTGG 1 cut(s) 2387
PfoI TCCNGGA 1 cut(s) 2613
PkrI GCNGC 6 cut(s) 263, 912, 1495, 1833, 2533, 2536
PleI GAGTC 2 cut(s) 1980, 2209
PmaCI CACGTG 1 cut(s) 89
PmlI CACGTG 1 cut(s) 89
PpsI GAGTC 2 cut(s) 1980, 2209
Ppu21I YACGTR 1 cut(s) 89
PshAI GACNNNNGTC 1 cut(s) 2121
PshBI ATTAAT 1 cut(s) 977
PsiI TTATAA 1 cut(s) 2510
Psp6I CCWGG 3 cut(s) 1308, 2129, 2613
PspCI CACGTG 1 cut(s) 89
PspFI CCCAGC 1 cut(s) 60
PspGI CCWGG 3 cut(s) 1308, 2129, 2613
PspN4I GGNNCC 6 cut(s) 663, 964, 1420, 1714, 2199, 2595
PspPI GGNCC 8 cut(s) 175, 203, 275, 394, 656, 728, 1312, 1418
PstI CTGCAG 2 cut(s) 266, 624
PstNI CAGNNNCTG 2 cut(s) 154, 628
PsuI RGATCY 7 cut(s) 43, 296, 322, 588, 1215, 2197, 2593
RsaI GTAC 3 cut(s) 2192, 2325, 2357
RsaNI GTAC 3 cut(s) 2191, 2324, 2356
RseI CAYNNNNRTG 2 cut(s) 1253, 2034
SatI GCNGC 6 cut(s) 262, 911, 1494, 1832, 2532, 2535
Sau96I GGNCC 8 cut(s) 175, 203, 275, 394, 656, 728, 1312, 1418
SchI GAGTC 2 cut(s) 1980, 2209
ScrFI CCNGG 5 cut(s) 1310, 1717, 2060, 2131, 2615
SduI GDGCHC 5 cut(s) 55, 1086, 1135, 1682, 1846
SexAI ACCWGGT 1 cut(s) 1308
SfaNI GCATC 4 cut(s) 316, 540, 600, 2518
SfcI CTRYAG 4 cut(s) 262, 291, 620, 1093
SinI GGWCC 5 cut(s) 175, 203, 394, 1312, 1418
SmiI ATTTAAAT 1 cut(s) 2100
SmiMI CAYNNNNRTG 2 cut(s) 1253, 2034
SmlI CTYRAG 3 cut(s) 1670, 2169, 2217
SmoI CTYRAG 3 cut(s) 1670, 2169, 2217
SpeI ACTAGT 2 cut(s) 238, 844
SphI GCATGC 1 cut(s) 2039
SseBI AGGCCT 3 cut(s) 22, 1478, 2470
SsiI CCGC 3 cut(s) 356, 2114, 2550
SspI AATATT 2 cut(s) 2207, 2621
StuI AGGCCT 3 cut(s) 22, 1478, 2470
StyD4I CCNGG 5 cut(s) 1308, 1715, 2058, 2129, 2613
StyI CCWWGG 1 cut(s) 1284
SwaI ATTTAAAT 1 cut(s) 2100
TaaI ACNGT 4 cut(s) 1079, 1147, 1653, 1688
TaiI ACGT 2 cut(s) 91, 1405
TaqI TCGA 3 cut(s) 918, 1838, 2427
TatI WGTACW 1 cut(s) 2355
TfiI GAWTC 5 cut(s) 1049, 1259, 1274, 1352, 1790
TscAI CASTG 6 cut(s) 177, 442, 453, 633, 1536, 1749
TseFI GTSAC 2 cut(s) 2147, 2161
TseI GCWGC 6 cut(s) 261, 910, 1493, 1831, 2531, 2534
Tsp45I GTSAC 2 cut(s) 2147, 2161
TspDTI ATGAA 6 cut(s) 473, 767, 810, 925, 1908, 2200
TspGWI ACGGA 1 cut(s) 1952
TspRI CASTG 6 cut(s) 177, 442, 453, 633, 1536, 1749
Van91I CCANNNNNTGG 1 cut(s) 2387
Vha464I CTTAAG 1 cut(s) 1670
VneI GTGCAC 2 cut(s) 1131, 1678
VpaK11BI GGWCC 5 cut(s) 175, 203, 394, 1312, 1418
VspI ATTAAT 1 cut(s) 977
XagI CCTNNNNNAGG 1 cut(s) 2601
XapI RAATTY 6 cut(s) 82, 351, 643, 931, 1320, 2539
XbaI TCTAGA 3 cut(s) 319, 1210, 2413
XceI RCATGY 1 cut(s) 2039
Zsp2I ATGCAT 1 cut(s) 555
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.