AT5G49770
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000487
Physical Location & Seq
Forward (+)
20222669 .. 20227466
4798 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G49770.1

Sequence Viewer

Length: 2841 bp
ATGAAGATGAGTTCAAGAATTGGATTATTTAAGCTCTTGATCTTGCTTTTCTTCCAAATTTACTCTGTTTATGCGTTCACAGATGGTTCAGATTTTACTGCTTTACAAGCCCTGAAGAACGAATGGGACACGTTATCCAAGAGTTGGAAAAGCTCTGATCCTTGTGGAACCGAATGGGTTGGAATTACATGTAACAACGATAACCGTGTTGTTTCAATATCATTAACCAACCGTAACTTGAAAGGAAAGCTTCCTACCGAAATTTCGACATTGTCTGAATTGCAAACCTTGGATTTGACTGGCAATCCTGAATTGTCTGGACCGCTTCCAGCAAATATCGGTAACCTCAGGAAGTTGACTTTCTTGAGCCTTATGGGATGTGCTTTTAATGGTCCAATCCCTGATTCCATAGGGAATCTTGAACAACTTACAAGACTCTCTCTGAATTTAAATAAATTTAGTGGAACAATTCCGGCTTCCATGGGACGGTTATCGAAACTATATTGGTTCGACATAGCTGACAATCAGTTAGAAGGAAAGCTTCCAGTTTCTGATGGGGCTTCTTTACCTGGACTTGACATGCTTCTTCAAACTGGGCATTTTCATTTTGGTAATAACAAGCTTTCAGGCGAAATCCCAGAGAAGCTCTTTAGCTCAGAAATGACTTTGCTACATGTGCTGTTTGATGGAAACCAATTCACCGGTAGCATCCCAGAGAGCCTCGGCCTAGTTCAAAATTTGACTGTGTTACGTCTTGATAGGAATAGACTAAGTGGAGACATTCCTTCAAGTCTTAATAATCTCACAAATCTTCAAGAACTGCATTTGTCCGACAACAAATTTACAGGTAGTCTTCCAAATTTGACCAGCTTGACCAGTCTCTACACATTGGATGTGAGCAATAACCCGTTGGCGTTATCACCGGTTCCATCATGGATCCCTTTCTTAAACTCTTTGTCAACATTAAGGTTGGAAGATATCCAACTTGATGGTCCAGTACCAACCTCCCTTTTTAGCCCTCTTCAATTGCAAACTGTTTCCCTAAAGCACAATCTTATAAACACAACATTGGACCTTGGTACCAACTATAGCAAACAATTGGATTTTGTGGATTTACGAGACAACTTCATAACTGGTTATAAATCACCAGCTAATAACCCCGTCAATGTAATGTTGGCAGATAATCAAGTGTGCCAAGACCCGGCGAATCAGCTGAGTGGCTACTGCAATGCAGTCCAACCAAATTCCACATTTTCTACCCTAACAAAATGTGGTAATCATTGTGGTAAAGGTAAGGAACCGAATCAAGGCTGCCACTGTGTGTATCCACTTACAGGAGTATTCACCTTAAGGTCTCCTTCATTCTCCGGATTTTCAAACAACAGTAACTTCCTAAAGTTTGGGGAGAGTTTAATGACTTTCTTTAAGAATGGCAAGTATCCTGTAGACTCTGTGGCCATGAGAAACATAAGCGAGAATCCAACTGATTATCATCTTTTGATAAATCTCTTGATCTTTCCATCGGGACGCGACCGCTTTAATCAGACGGAAATGGACTCTATTAATTCTGCATTTACCATTCAGGATTATAAGCCTCCTCCAAGATTTGGTCCTTATATTTTCGTCGCCGATCAGTACAAAACATTCTCTGATTTAGAAGATTCCAAGACAGTAAGTATGAAAGTTATAATTGGAGTAGTAGTTGGTGTTGTAGTTCTTCTGTTGCTGTTGGCTTTAGCTGGGATTTACGCTCTTAGACAGAAGAAGAGAGCTCAGAGAGCAACTGATCAAATGAATCCTTTTGCCAAGTGGGATGCGGGGAAGAATGAAATGGATGCTCCACAACTAATGGGAACAAAAGCCTTTACTTTCGAAGAGCTTAGCAAATGTACTAACAACTTTTCAGATGCAAATGATGTTGGCGGTGGAGGTTATGGCCAGGTCTACAAAGGTACCCTTCCCAATGGGCAAGTCATAGCAATCAAAAGAGCTCAACAAGGATCCATGCAAGGAGCGTTCGAGTTTAAGACCGAGATTGAGCTTCTTTCAAGGGTCCATCATAAAAATGTTGTTAAGCTTTTGGGCTTCTGTTTTGATCAAAAAGAACAAATGCTCGTATACGAGTACATACCTAATGGGTCCCTTAGAGACGGTCTATCAGGGAAGAATGGGGTTAAACTGGATTGGACAAGAAGGCTCAAAATAGCACTTGGCTCAGGGAAGGGTCTAGCTTATCTTCATGAGCTTGCTGATCCTCCAATTATACATAGAGACGTCAAATCAAATAACATATTACTTGATGAACATCTAACCGCAAAGGTTGCTGATTTCGGTCTCTCCAAACTTGTGGGGGACCCTGAAAAAGCTCATGTCACAACACAAGTGAAAGGAACCATGGGCTATCTTGATCCTGAGTACTACATGACGAATCAATTGACGGAGAAGAGCGATGTGTATGGGTTTGGTGTGGTGATGCTTGAGTTATTAACCGGTAAAAGTCCGATAGATAGAGGCAGCTATGTTGTGAAAGAGGTAAAGAAGAAGATGGATAAATCGAGGAACTTGTATGACTTACAAGAATTGTTGGACACGACAATTATCCAAAACAGCGGGAATTTGAAAGGGTTCGAGAAGTATGTAGATGTGGCTCTACAATGCGTGGAGCCAGAGGGAGTTAATAGGCCAACAATGAGTGAGGTGGTGCAAGAACTTGAGAGCATATTGCGGCTTGTTGGATTAAACCCTAACGCCGATTCAGCAACATACGAGGAAGCATCTGGTGATCCTTATGGTAGGGATTCGTTTGAGTACACTGGGGTTTTCCCAACTCCAAAACCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 Pkinase Pkinase_Tyr

Protein Analysis

946

Amino Acids

104.52

Weight (kDa)

5.88

Isoelectric Point (pI)

29.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 65 2.6e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 82 - 172 1.2e-10 Leucine-rich repeat region
LRR_8 PF13855 246 - 304 9.3e-06 Leucine rich repeat
LRR_4 PF12799 269 - 308 8.4e-07 Leucine Rich repeats (2 copies)
Pkinase PF00069 636 - 902 4.7e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 638 - 904 3.2e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 1058, 1140, 1590, 1688
AatII GACGTC 1 cut(s) 2277
Acc65I GGTACC 2 cut(s) 1079, 1952
AccB1I GGYRCC 2 cut(s) 1079, 1952
AccB7I CCANNNNNTGG 2 cut(s) 144, 1607
AccI GTMKAC 3 cut(s) 1446, 1944, 2118
AccII CGCG 1 cut(s) 1530
AccIII TCCGGA 1 cut(s) 1367
AciI CCGC 7 cut(s) 323, 1534, 1817, 1923, 2313, 2610, 2725
AclWI GGATC 8 cut(s) 152, 931, 944, 1995, 2008, 2246, 2402, 2777
AcoI YGGCCR 2 cut(s) 1455, 1936
AcsI RAATTY 9 cut(s) 57, 261, 445, 455, 736, 839, 859, 1243, 2614
AcuI CTGAAG 1 cut(s) 134
AcyI GRCGYC 1 cut(s) 2274
AdeI CACNNNGTG 1 cut(s) 1321
AfaI GTAC 8 cut(s) 999, 1081, 1637, 1891, 1954, 2126, 2417, 2810
AfiI CCNNNNNNNGG 6 cut(s) 144, 486, 1201, 1307, 1334, 1607
AflII CTTAAG 1 cut(s) 1348
AflIII ACRYGT 3 cut(s) 129, 188, 673
AgeI ACCGGT 3 cut(s) 701, 922, 2489
AjnI CCWGG 2 cut(s) 568, 1938
AjuI GAANNNNNNNTTGG 2 cut(s) 388, 420
Alw21I GWGCWC 2 cut(s) 1774, 1993
Alw26I GTCTC 7 cut(s) 771, 884, 1113, 1359, 2142, 2265, 2339
AlwI GGATC 8 cut(s) 152, 931, 944, 1995, 2008, 2246, 2402, 2777
AlwNI CAGNNNCTG 1 cut(s) 551
Aor13HI TCCGGA 1 cut(s) 1367
AoxI GGCC 4 cut(s) 724, 1455, 1936, 2681
ApeKI GCWGC 2 cut(s) 1311, 2514
ApoI RAATTY 9 cut(s) 57, 261, 445, 455, 736, 839, 859, 1243, 2614
AseI ATTAAT 1 cut(s) 1563
AsiGI ACCGGT 3 cut(s) 701, 922, 2489
Asp700I GAANNNNTTC 1 cut(s) 2624
Asp718I GGTACC 2 cut(s) 1079, 1952
AspS9I GGNCC 8 cut(s) 320, 392, 992, 1072, 1610, 2053, 2139, 2353
AsuC2I CCSGG 1 cut(s) 1202
AsuHPI GGTGA 6 cut(s) 691, 912, 1137, 1336, 2482, 2792
AsuII TTCGAA 1 cut(s) 1872
AvaII GGWCC 8 cut(s) 320, 392, 992, 1072, 1610, 2053, 2139, 2353
AxyI CCTNAGG 1 cut(s) 347
BaeI ACNNNNGTAYC 4 cut(s) 1063, 1096, 1936, 1969
BalI TGGCCA 2 cut(s) 1457, 1938
BamHI GGATCC 2 cut(s) 936, 2000
BanI GGYRCC 2 cut(s) 1079, 1952
BanII GRGCYC 2 cut(s) 1774, 1993
BbsI GAAGAC 1 cut(s) 845
Bbv12I GWGCWC 2 cut(s) 1774, 1993
BbvI GCAGC 2 cut(s) 1298, 2526
BccI CCATC 8 cut(s) 77, 548, 680, 937, 983, 1528, 2064, 2539
BciT130I CCWGG 2 cut(s) 570, 1940
BciVI GTATCC 2 cut(s) 1335, 1449
BclI TGATCA 2 cut(s) 1786, 2095
BcnI CCSGG 1 cut(s) 1202
BcoDI GTCTC 7 cut(s) 771, 884, 1113, 1359, 2142, 2265, 2339
BfaI CTAG 2 cut(s) 728, 2228
BfmI CTRYAG 2 cut(s) 1087, 1443
BfrI CTTAAG 1 cut(s) 1348
BfuI GTATCC 2 cut(s) 1335, 1449
BisI GCNGC 3 cut(s) 1312, 2515, 2726
BlpI GCTNAGC 1 cut(s) 1880
BlsI GCNGC 3 cut(s) 1313, 2516, 2727
BmcAI AGTACT 1 cut(s) 2417
Bme1390I CCNGG 3 cut(s) 570, 1202, 1940
Bme18I GGWCC 8 cut(s) 320, 392, 992, 1072, 1610, 2053, 2139, 2353
BmgT120I GGNCC 8 cut(s) 320, 392, 992, 1072, 1610, 2053, 2139, 2353
BmrFI CCNGG 3 cut(s) 570, 1202, 1940
BmrI ACTGGG 2 cut(s) 603, 2823
BmsI GCATC 6 cut(s) 717, 1804, 1825, 1897, 2463, 2783
BmuI ACTGGG 2 cut(s) 603, 2823
BpiI GAAGAC 1 cut(s) 845
Bpu10I CCTNAGC 1 cut(s) 2215
Bpu1102I GCTNAGC 1 cut(s) 1880
Bpu14I TTCGAA 1 cut(s) 1872
BpuEI CTTGAG 3 cut(s) 385, 2498, 2732
BpuMI CCSGG 1 cut(s) 1202
BsaBI GATNNNNATC 2 cut(s) 1491, 2304
BsaHI GRCGYC 1 cut(s) 2274
BsaI GGTCTC 2 cut(s) 1359, 2339
BsaJI CCNNGG 5 cut(s) 288, 480, 721, 1075, 2394
BsaWI WCCGGW 4 cut(s) 701, 922, 1367, 2489
BsaXI ACNNNNNCTCC 2 cut(s) 1686, 1716
Bsc4I CCNNNNNNNGG 6 cut(s) 144, 486, 1201, 1307, 1334, 1607
Bse118I RCCGGY 3 cut(s) 701, 922, 2489
Bse1I ACTGG 8 cut(s) 304, 545, 598, 876, 995, 1138, 2184, 2818
Bse21I CCTNAGG 1 cut(s) 347
Bse3DI GCAATG 1 cut(s) 1234
Bse8I GATNNNNATC 2 cut(s) 1491, 2304
BseAI TCCGGA 1 cut(s) 1367
BseBI CCWGG 2 cut(s) 570, 1940
BseDI CCNNGG 5 cut(s) 288, 480, 721, 1075, 2394
BseGI GGATG 5 cut(s) 383, 708, 898, 1819, 1840
BseJI GATNNNNATC 2 cut(s) 1491, 2304
BseLI CCNNNNNNNGG 6 cut(s) 144, 486, 1201, 1307, 1334, 1607
BseMI GCAATG 1 cut(s) 1234
BseMII CTCAG 6 cut(s) 361, 669, 1205, 1787, 2229, 2403
BseNI ACTGG 8 cut(s) 304, 545, 598, 876, 995, 1138, 2184, 2818
BseRI GAGGAG 1 cut(s) 1587
BseXI GCAGC 2 cut(s) 1298, 2526
BseYI CCCAGC 1 cut(s) 1739
Bsh1236I CGCG 1 cut(s) 1530
Bsh1285I CGRYCG 1 cut(s) 1534
BshFI GGCC 4 cut(s) 726, 1457, 1938, 2683
BshNI GGYRCC 2 cut(s) 1079, 1952
BshTI ACCGGT 3 cut(s) 701, 922, 2489
BsiEI CGRYCG 1 cut(s) 1534
BsiHKAI GWGCWC 2 cut(s) 1774, 1993
BsiSI CCGG 6 cut(s) 473, 702, 923, 1202, 1368, 2490
BslFI GGGAC 5 cut(s) 140, 498, 1539, 2125, 2366
BslI CCNNNNNNNGG 6 cut(s) 144, 486, 1201, 1307, 1334, 1607
BsmAI GTCTC 7 cut(s) 771, 884, 1113, 1359, 2142, 2265, 2339
BsmBI CGTCTC 2 cut(s) 2142, 2265
BsmFI GGGAC 5 cut(s) 140, 498, 1539, 2125, 2366
BsnI GGCC 4 cut(s) 726, 1457, 1938, 2683
Bso31I GGTCTC 2 cut(s) 1359, 2339
Bsp119I TTCGAA 1 cut(s) 1872
Bsp1286I GDGCHC 2 cut(s) 1774, 1993
Bsp13I TCCGGA 1 cut(s) 1367
Bsp1720I GCTNAGC 1 cut(s) 1880
Bsp19I CCATGG 2 cut(s) 480, 2394
BspACI CCGC 7 cut(s) 323, 1534, 1817, 1923, 2313, 2610, 2725
BspANI GGCC 4 cut(s) 726, 1457, 1938, 2683
BspCNI CTCAG 6 cut(s) 360, 668, 1206, 1786, 2228, 2404
BspEI TCCGGA 1 cut(s) 1367
BspFNI CGCG 1 cut(s) 1530
BspHI TCATGA 1 cut(s) 2239
BspPI GGATC 8 cut(s) 152, 931, 944, 1995, 2008, 2246, 2402, 2777
BspQI GCTCTTC 2 cut(s) 1869, 2438
BspT104I TTCGAA 1 cut(s) 1872
BspT107I GGYRCC 2 cut(s) 1079, 1952
BspTI CTTAAG 1 cut(s) 1348
BspTNI GGTCTC 2 cut(s) 1359, 2339
BsrDI GCAATG 1 cut(s) 1234
BsrFI RCCGGY 3 cut(s) 701, 922, 2489
BsrI ACTGG 8 cut(s) 304, 545, 598, 876, 995, 1138, 2184, 2818
BssAI RCCGGY 3 cut(s) 701, 922, 2489
BssECI CCNNGG 5 cut(s) 288, 480, 721, 1075, 2394
BssNAI GTATAC 1 cut(s) 2119
BssNI GRCGYC 1 cut(s) 2274
BssT1I CCWWGG 4 cut(s) 288, 480, 1075, 2394
Bst1107I GTATAC 1 cut(s) 2119
Bst2UI CCWGG 2 cut(s) 570, 1940
Bst4CI ACNGT 9 cut(s) 206, 233, 489, 745, 1036, 1319, 1385, 1672, 2153
Bst6I CTCTTC 4 cut(s) 1026, 1760, 1869, 2438
BstACI GRCGYC 1 cut(s) 2274
BstAFI CTTAAG 1 cut(s) 1348
BstAPI GCANNNNNTGC 1 cut(s) 2321
BstBI TTCGAA 1 cut(s) 1872
BstC8I GCNNGC 1 cut(s) 2247
BstDSI CCRYGG 2 cut(s) 480, 2394
BstEII GGTNACC 1 cut(s) 341
BstF5I GGATG 5 cut(s) 383, 708, 898, 1819, 1840
BstFNI CGCG 1 cut(s) 1530
BstMAI GTCTC 7 cut(s) 771, 884, 1113, 1359, 2142, 2265, 2339
BstMCI CGRYCG 1 cut(s) 1534
BstMWI GCNNNNNNNGC 5 cut(s) 107, 676, 1778, 2321, 2756
BstNI CCWGG 2 cut(s) 570, 1940
BstNSI RCATGY 3 cut(s) 192, 583, 677
BstPI GGTNACC 1 cut(s) 341
BstSCI CCNGG 3 cut(s) 568, 1200, 1938
BstSFI CTRYAG 2 cut(s) 1087, 1443
BstUI CGCG 1 cut(s) 1530
BstV1I GCAGC 2 cut(s) 1298, 2526
BstV2I GAAGAC 1 cut(s) 845
BstX2I RGATCY 2 cut(s) 936, 2000
BstXI CCANNNNNNTGG 2 cut(s) 989, 2347
BstYI RGATCY 2 cut(s) 936, 2000
BstZ17I GTATAC 1 cut(s) 2119
Bsu36I CCTNAGG 1 cut(s) 347
BsuI GTATCC 2 cut(s) 1335, 1449
BsuRI GGCC 4 cut(s) 726, 1457, 1938, 2683
BtgI CCRYGG 2 cut(s) 480, 2394
BtgZI GCGATG 1 cut(s) 2463
BtsCI GGATG 5 cut(s) 383, 708, 898, 1819, 1840
BtsIMutI CAGTG 2 cut(s) 1315, 2811
Cac8I GCNNGC 1 cut(s) 2247
CaiI CAGNNNCTG 1 cut(s) 551
CciI TCATGA 1 cut(s) 2239
Cfr10I RCCGGY 3 cut(s) 701, 922, 2489
Cfr13I GGNCC 8 cut(s) 320, 392, 992, 1072, 1610, 2053, 2139, 2353
CseI GACGC 1 cut(s) 1536
Csp6I GTAC 8 cut(s) 998, 1080, 1636, 1890, 1953, 2125, 2416, 2809
CspAI ACCGGT 3 cut(s) 701, 922, 2489
CviQI GTAC 8 cut(s) 998, 1080, 1636, 1890, 1953, 2125, 2416, 2809
DraI TTTAAA 1 cut(s) 450
DraIII CACNNNGTG 1 cut(s) 1321
EaeI YGGCCR 2 cut(s) 1455, 1936
Eam1104I CTCTTC 4 cut(s) 1026, 1760, 1869, 2438
EarI CTCTTC 4 cut(s) 1026, 1760, 1869, 2438
Ecl136II GAGCTC 2 cut(s) 1772, 1991
Eco130I CCWWGG 4 cut(s) 288, 480, 1075, 2394
Eco24I GRGCYC 2 cut(s) 1774, 1993
Eco31I GGTCTC 2 cut(s) 1359, 2339
Eco32I GATATC 1 cut(s) 979
Eco47I GGWCC 8 cut(s) 320, 392, 992, 1072, 1610, 2053, 2139, 2353
Eco53kI GAGCTC 2 cut(s) 1772, 1991
Eco57I CTGAAG 1 cut(s) 134
Eco81I CCTNAGG 1 cut(s) 347
Eco91I GGTNACC 1 cut(s) 341
EcoICRI GAGCTC 2 cut(s) 1772, 1991
EcoO109I RGGNCCY 2 cut(s) 2139, 2353
EcoO65I GGTNACC 1 cut(s) 341
EcoRII CCWGG 2 cut(s) 568, 1938
EcoRV GATATC 1 cut(s) 979
EcoT14I CCWWGG 4 cut(s) 288, 480, 1075, 2394
EcoT38I GRGCYC 2 cut(s) 1774, 1993
ErhI CCWWGG 4 cut(s) 288, 480, 1075, 2394
Esp3I CGTCTC 2 cut(s) 2142, 2265
FalI AAGNNNNNCTT 8 cut(s) 234, 266, 525, 557, 1342, 1374, 1941, 1973
FaqI GGGAC 5 cut(s) 140, 498, 1539, 2125, 2366
FauI CCCGC 2 cut(s) 1810, 2603
FbaI TGATCA 2 cut(s) 1786, 2095
FblI GTMKAC 3 cut(s) 1446, 1944, 2118
Fnu4HI GCNGC 3 cut(s) 1312, 2515, 2726
FokI GGATG 5 cut(s) 390, 695, 905, 1826, 1847
FriOI GRGCYC 2 cut(s) 1774, 1993
Fsp4HI GCNGC 3 cut(s) 1312, 2515, 2726
FspBI CTAG 2 cut(s) 728, 2228
GluI GCNGC 3 cut(s) 1312, 2515, 2726
GsaI CCCAGC 1 cut(s) 1743
HaeIII GGCC 4 cut(s) 726, 1457, 1938, 2683
HapII CCGG 6 cut(s) 473, 702, 923, 1202, 1368, 2490
HgaI GACGC 1 cut(s) 1536
Hin1I GRCGYC 1 cut(s) 2274
HincII GTYRAC 2 cut(s) 357, 960
HindII GTYRAC 2 cut(s) 357, 960
HindIII AAGCTT 4 cut(s) 248, 539, 620, 2075
HpaII CCGG 6 cut(s) 473, 702, 923, 1202, 1368, 2490
HphI GGTGA 6 cut(s) 691, 912, 1137, 1336, 2482, 2792
Hpy166II GTNNAC 7 cut(s) 78, 357, 960, 1447, 1945, 2119, 2811
Hpy8I GTNNAC 7 cut(s) 78, 357, 960, 1447, 1945, 2119, 2811
Hpy99I CGWCG 1 cut(s) 1628
HpyAV CCTTC 6 cut(s) 527, 795, 1368, 1967, 2187, 2215
HpyCH4III ACNGT 9 cut(s) 206, 233, 489, 745, 1036, 1319, 1385, 1672, 2153
HpyCH4IV ACGT 3 cut(s) 131, 751, 2274
HpyCH4V TGCA 9 cut(s) 283, 823, 1030, 1227, 1232, 1571, 1910, 2008, 2704
HpyF10VI GCNNNNNNNGC 5 cut(s) 107, 676, 1778, 2321, 2756
HpySE526I ACGT 3 cut(s) 131, 751, 2274
Hsp92I GRCGYC 1 cut(s) 2274
KflI GGGWCCC 2 cut(s) 2139, 2353
Kpn2I TCCGGA 1 cut(s) 1367
KpnI GGTACC 2 cut(s) 1083, 1956
Ksp22I TGATCA 2 cut(s) 1786, 2095
LguI GCTCTTC 2 cut(s) 1869, 2438
LmnI GCTCC 3 cut(s) 1843, 2012, 2662
Lsp1109I GCAGC 2 cut(s) 1298, 2526
LweI GCATC 6 cut(s) 717, 1804, 1825, 1897, 2463, 2783
MaeI CTAG 2 cut(s) 728, 2228
MaeII ACGT 3 cut(s) 131, 751, 2274
MaeIII GTNAC 6 cut(s) 191, 233, 341, 747, 1385, 2371
MfeI CAATTG 3 cut(s) 1025, 1097, 2432
MflI RGATCY 2 cut(s) 936, 2000
MhlI GDGCHC 2 cut(s) 1774, 1993
MlsI TGGCCA 2 cut(s) 1457, 1938
MluNI TGGCCA 2 cut(s) 1457, 1938
MlyI GAGTC 3 cut(s) 429, 1442, 1550
MmeI TCCRAC 9 cut(s) 125, 160, 855, 951, 1006, 1261, 1505, 2565, 2713
Mox20I TGGCCA 2 cut(s) 1457, 1938
MroI TCCGGA 1 cut(s) 1367
MroXI GAANNNNTTC 1 cut(s) 2624
MscI TGGCCA 2 cut(s) 1457, 1938
MslI CAYNNNNRTG 1 cut(s) 2064
Msp20I TGGCCA 2 cut(s) 1457, 1938
MspA1I CMGCKG 2 cut(s) 1213, 2610
MspCI CTTAAG 1 cut(s) 1348
MspI CCGG 6 cut(s) 473, 702, 923, 1202, 1368, 2490
MspR9I CCNGG 3 cut(s) 570, 1202, 1940
MunI CAATTG 3 cut(s) 1025, 1097, 2432
MvaI CCWGG 2 cut(s) 570, 1940
MvnI CGCG 1 cut(s) 1530
MwoI GCNNNNNNNGC 5 cut(s) 107, 676, 1778, 2321, 2756
NciI CCSGG 1 cut(s) 1202
NcoI CCATGG 2 cut(s) 480, 2394
NmeAIII GCCGAG 1 cut(s) 702
NmuCI GTSAC 1 cut(s) 2371
NspI RCATGY 3 cut(s) 192, 583, 677
NspV TTCGAA 1 cut(s) 1872
PagI TCATGA 1 cut(s) 2239
PciI ACATGT 2 cut(s) 188, 673
PciSI GCTCTTC 2 cut(s) 1869, 2438
PdmI GAANNNNTTC 1 cut(s) 2624
PflFI GACNNNGTC 1 cut(s) 271
PflMI CCANNNNNTGG 2 cut(s) 144, 1607
PinAI ACCGGT 3 cut(s) 701, 922, 2489
PkrI GCNGC 3 cut(s) 1313, 2516, 2727
PleI GAGTC 3 cut(s) 429, 1442, 1550
PpsI GAGTC 3 cut(s) 429, 1442, 1550
PpuMI RGGWCCY 2 cut(s) 2139, 2353
PscI ACATGT 2 cut(s) 188, 673
PshBI ATTAAT 1 cut(s) 1563
PsiI TTATAA 4 cut(s) 1058, 1140, 1590, 1688
Psp124BI GAGCTC 2 cut(s) 1774, 1993
Psp5II RGGWCCY 2 cut(s) 2139, 2353
Psp6I CCWGG 2 cut(s) 568, 1938
PspEI GGTNACC 1 cut(s) 341
PspFI CCCAGC 1 cut(s) 1739
PspGI CCWGG 2 cut(s) 568, 1938
PspPI GGNCC 8 cut(s) 320, 392, 992, 1072, 1610, 2053, 2139, 2353
PspPPI RGGWCCY 2 cut(s) 2139, 2353
PstNI CAGNNNCTG 1 cut(s) 551
PsuI RGATCY 2 cut(s) 936, 2000
PsyI GACNNNGTC 1 cut(s) 271
PvuII CAGCTG 1 cut(s) 1213
RsaI GTAC 8 cut(s) 999, 1081, 1637, 1891, 1954, 2126, 2417, 2810
RsaNI GTAC 8 cut(s) 998, 1080, 1636, 1890, 1953, 2125, 2416, 2809
RseI CAYNNNNRTG 1 cut(s) 2064
SacI GAGCTC 2 cut(s) 1774, 1993
SapI GCTCTTC 2 cut(s) 1869, 2438
SatI GCNGC 3 cut(s) 1312, 2515, 2726
Sau96I GGNCC 8 cut(s) 320, 392, 992, 1072, 1610, 2053, 2139, 2353
ScaI AGTACT 1 cut(s) 2417
SchI GAGTC 3 cut(s) 429, 1442, 1550
ScrFI CCNGG 3 cut(s) 570, 1202, 1940
SduI GDGCHC 2 cut(s) 1774, 1993
SfaNI GCATC 6 cut(s) 717, 1804, 1825, 1897, 2463, 2783
SfcI CTRYAG 2 cut(s) 1087, 1443
SfuI TTCGAA 1 cut(s) 1872
SinI GGWCC 8 cut(s) 320, 392, 992, 1072, 1610, 2053, 2139, 2353
SmiI ATTTAAAT 1 cut(s) 450
SmiMI CAYNNNNRTG 1 cut(s) 2064
SmlI CTYRAG 4 cut(s) 364, 1348, 2477, 2711
SmoI CTYRAG 4 cut(s) 364, 1348, 2477, 2711
SsiI CCGC 7 cut(s) 323, 1534, 1817, 1923, 2313, 2610, 2725
SspMI CTAG 2 cut(s) 728, 2228
SstI GAGCTC 2 cut(s) 1774, 1993
StyD4I CCNGG 3 cut(s) 568, 1200, 1938
StyI CCWWGG 4 cut(s) 288, 480, 1075, 2394
SwaI ATTTAAAT 1 cut(s) 450
TaaI ACNGT 9 cut(s) 206, 233, 489, 745, 1036, 1319, 1385, 1672, 2153
TaiI ACGT 3 cut(s) 134, 754, 2277
TaqI TCGA 7 cut(s) 266, 494, 510, 1872, 2019, 2555, 2628
TaqII GACCGA 2 cut(s) 2045, 2321
TatI WGTACW 5 cut(s) 1635, 1889, 2124, 2415, 2808
TauI GCSGC 1 cut(s) 2728
TscAI CASTG 2 cut(s) 1322, 2818
TseFI GTSAC 1 cut(s) 2371
TseI GCWGC 2 cut(s) 1311, 2514
Tsp45I GTSAC 1 cut(s) 2371
TspDTI ATGAA 9 cut(s) 17, 593, 1117, 1350, 1694, 1808, 1842, 2228, 2316
TspGWI ACGGA 2 cut(s) 1562, 2453
TspRI CASTG 2 cut(s) 1322, 2818
Tth111I GACNNNGTC 1 cut(s) 271
Van91I CCANNNNNTGG 2 cut(s) 144, 1607
Vha464I CTTAAG 1 cut(s) 1348
VpaK11BI GGWCC 8 cut(s) 320, 392, 992, 1072, 1610, 2053, 2139, 2353
VspI ATTAAT 1 cut(s) 1563
XapI RAATTY 9 cut(s) 57, 261, 445, 455, 736, 839, 859, 1243, 2614
XceI RCATGY 3 cut(s) 192, 583, 677
XmiI GTMKAC 3 cut(s) 1446, 1944, 2118
XmnI GAANNNNTTC 1 cut(s) 2624
XspI CTAG 2 cut(s) 728, 2228
ZraI GACGTC 1 cut(s) 2275
ZrmI AGTACT 1 cut(s) 2417
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.