Rroxscaffold_1G00038400

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000487
Physical Location & Seq
Forward (+)
55797100 .. 55901522
104423 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00038400.1

Sequence Viewer

Length: 2838 bp
ATGCCCATTTTCCATAAAGTAATGGATCGAGCCACTCAAGTATTACGGCTGCTCGTGTTAATCCCATTTTTTGTTATTGCAGCAGAGGGAACTGTTCAGGAGTATAATGCTATTATGACACTCAGGGATGAATGGGGCATCAACCCTCCAAGTTGGGTTGGTTCAGATCCTTGTGGCGACTGGGAAGGTATTACTTGCACCAATTCACGGATCACTGCTATAACATTGGCAGACATGGGTTTGAAAGGCGGGCTACCTAGTGATATCGAGACATTATCTGAGCTACAGATTCTGAATCTGGCTTTCAATGAGAACCTGAAGGGACAACTTCCAGCATCAATTGGAAACTTGACCAAACTAAAAACCGTAATCCTGGATGGTTGCAGATTCTCTGGTCCTATTCCAGCTACAGTAGGATCTTTAAAGCAACTTTCTTATCTATCTCTGAAAAACAATAGATTTAGTGGTCCAATTCCACCTTCCATTGGCAATCTAGCCAATCTTGTCTTTCTGGACCTATCGGACAACAGGCTTGGGGATTCCATTCCAGTCTCTAATGGGACTGCACCTGGTCTTGATATGTTAAATAAAACAAAGCACTTTCATTTTTCAAATAACCAGCTCTCCGGCAGCATTCCACCTCAACTGTTCAGCTCAAATATGTCTCTGATACATTTGATTTTAGACAGAAATAATTTTACTGGCAGCATCCCTTCCACACTTGGACTTGTGAAAACTCTGGAGGCAGTACGCCTTGATAGAAATTCATTAAGTGGGTCTGTACCTACAAGCCTCAGAAATCTTACAAATGTGTCTGAACTGCACTTGTCCAACAATAAACTGACTGGCCTGGTGCCCAACCTTACTCTCATGGATTCCCTCTACTATGTGGATATGAGCAATAATACTTTTGATGCGTCAGATATTCCTAATTGGTTTTCAACCTTGAAGCTCTTGACAACATTAATGATGGAAAACACAGGACTTCAGGGACAAGTCCCTCCAGCCCTTTTCAGCCTTCAAAATTTGGAGACAGTGATACTAAAGAACAACAGTCTGAATGGTACATTGGATATTAATGGAACCAATATTGGCAACCAATTGAACCTAATTGATCTGCAGAAGAACAACATTGCTGATCTTGCACCAATTGATGAGGGATCCAACTACACATTGATTCTAGTTGACAATCCAATTTGTGAGGGGAGTCAGAATAACATGGCAAAGAACTACTGTAATGGTTCACCTACTAATTCCTCGATTTCAACTACACCAAGTAATTGTGCTGCCTGTAGTTCCGGCCAGGTTGCTTCCCCCAACTGTAAATGTGCATCTCCCTATACACGGACTCTAGTCTTCTTATTTGTTTCTTTCTCAAACTTGGATGACATGAATTATTACAAAGCTTTCTCAGACAATCTCACAAGATCTCTTCAGTCCAAAAACCTTCCGGTGGATTCAGTTTCACTGAGTCATCCAAGCTGGACCTCATCTTATCAACTTGAAATTATCATAGAAATTTTCCCATCCAGTGATCAAGTTAGCTTCAACCAAACAGAAAGTTCGGCGATTACATCTGTTCTTAGCTACCAGAGTCTAGAGGGACGTCCAAATTATTTTGGACCCTACTCTTTTCTTGTTCTTTACACGAACTCTGGAGGATCAAACAAGGGCGTGATAATTGGAACGGCAATTGGTGGTTCTGTGCTCCTTTCATTATTAGTCCTTGTAGGGCTTTATGCTCTCCACCAGAAGAGGAAAGCAGATAAGTCAATGAGTGGATCGATCCTTTTGACAGGGATTCCAAATAGCAGTGCTAGTGGTCCTCAACTAAAAGGAGCAAGATTGTTCTCATTTGAAGAGCTCAAGAAATGCACCGATGGTTTTTCAAAAGCAAAAGATATTGGATCTGGGGGTTATGGCCAGGTGTATAAGGGAATTCTTCCAACAGGACAAATGGTTGCCATTAAAAGAGCTAAACGGGAATCTATGCAGGGAGGAGTTGAGTTCAATGCCGAGGTTGAGCTCCTATCACGAGTACATCATAAGAATCTTGTTGGCCTTGTAGGTTTTTGTTTTGAGCAAGGAGAACAAATATTGGTATATGAGTATGTTCCAAATGGTGATTTGAGGGACACCCTATCAGGGAAGTCCGGAATCAGGTTGGACTGGACGAGAAGACTTCAAGTAGCACTTGGTGCCGCGAGAGGTCTGGCATATCTTCATGAACATGCAAACCCAACCATTATACACCGGGACATCAAATCAAACAACATACTACTCGATAAAGATTTAAATGCAAAAGTTGCTGATTTTGGTCTCTCCAAGTCAATTGCTGATAGTGGAATGGATCACTTATCTACTCAAGTTAAAGGGACACTGGGCTACTTGGATCCTGAATATTATATGACTCAACAGTTGACTGACAAGAGCGACGTGTATAGCTTTGGCGTGGTAATGTTGGAGCTGATAACTGCTAGAAGGCCAATAATGCAAGGGAATTATATAGTGAGAGTGGTACAGATGACAATGGATAAGTCGAAAGATTTGTACAACCTTGATGACATTCTTGATCCATTCATTGGTTTAGGAACAGAGCTGAAAGGTGTAGAATTGTTTGTGGATTTAGCAATGTCTTGTGTAGAAGAATTAAGGGATAAAAGACCAAGAATGGGGGAAGTGGTGAAACAGATAGAGAACATTATACAAATTGCTGCTTTGAACGCCGGTACTAATCCATTGTCCACTTCAGCAAGTTATGAGGAATATGACTGTAAGGACAGCACCGAGGATGTTTACAGCAGACCCTTTGATTATAGTGGAGTTTTTGACGGATGA

Protein Analysis

945

Amino Acids

103.1

Weight (kDa)

5.42

Isoelectric Point (pI)

33.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 630 - 896 2.5e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 632 - 896 5.1e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G49760 AT5G49770
fragaria_vesca FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23870 FvH4_3g23881 FvH4_3g23881 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_3g23890 FvH4_5g27161 FvH4_5g27170
malus_domestica MD11G1206300.v1.1
prunus_persica Prupe.4G230700_v2.0.a1 Prupe.4G230700_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1 Prupe.4G231100_v2.0.a1
pyrus_communis pycom11g17930
rosa_chinensis RchiOBHm_Chr5g0042211 RchiOBHm_Chr5g0042261 RchiOBHm_Chr5g0042271 RchiOBHm_Chr5g0042311 RchiOBHm_Chr5g0042381 RchiOBHm_Chr7g0218261
rosa_laevigata RLG00000002384 RLG00000002385 RLG00000034112 RLG00000034114 RLG00000034116 RLG00000034118
rosa_multiflora Rmu_sc0001715.1_g000008 Rmu_sc0001715.1_g000012 Rmu_sc0001715.1_g000026 Rmu_sc0004956.1_g000008
rosa_roxburghii Rroxscaffold_1G00038360 Rroxscaffold_1G00038390 Rroxscaffold_1G00038400 Rroxscaffold_1G00038450 Rroxscaffold_3G00241180
rosa_rugosa Rorug05G0198800 Rorug05G0199000 Rorug05G0199100.1 Rorug05G0199200 Rorug05G0199300 Rorug07G0175900
rosa_samantha Rh5AG283400 Rh5AG283900 Rh5AG284100 Rh5AG284300 Rh5AG284900 Rh5AG285300 Rh5AG285700 Rh5BG289300 Rh5BG289900 Rh5BG290200 Rh5BG290400 Rh5CG320700 Rh5CG321200 Rh5CG321500 Rh5CG322100 Rh5CG322400 Rh5DG298600 Rh5DG299100 Rh5DG299400 Rh5DG300200 Rh7AG317500 Rh7BG308900 Rh7CG334400 Rh7DG316500
rosa_wichuraiana Rw0G001480 Rw0G001500 Rw0G001750 Rw0G001780 Rw0G015430 Rw5G026520 Rw7G026960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1609
AccB1I GGYRCC 2 cut(s) 853, 2198
AccB7I CCANNNNNTGG 1 cut(s) 2582
AccII CGCG 1 cut(s) 2204
AccIII TCCGGA 1 cut(s) 2153
AciI CCGC 2 cut(s) 249, 2202
AcoI YGGCCR 2 cut(s) 1300, 1921
AcsI RAATTY 4 cut(s) 763, 1024, 1518, 1938
AcuI CTGAAG 4 cut(s) 338, 971, 1418, 2733
AcyI GRCGYC 1 cut(s) 1606
AdeI CACNNNGTG 1 cut(s) 2198
AfaI GTAC 7 cut(s) 750, 783, 1066, 2040, 2520, 2552, 2731
AfiI CCNNNNNNNGG 8 cut(s) 207, 485, 1344, 1453, 2145, 2160, 2582, 2672
AflIII ACRYGT 1 cut(s) 2436
AjiI CACGTC 1 cut(s) 2437
AjnI CCWGG 5 cut(s) 372, 568, 849, 1302, 1923
AjuI GAANNNNNNNTTGG 4 cut(s) 463, 495, 1052, 1084
Alw21I GWGCWC 3 cut(s) 1710, 1866, 2028
Alw26I GTCTC 5 cut(s) 263, 556, 669, 1025, 2324
AlwNI CAGNNNCTG 1 cut(s) 292
Aor13HI TCCGGA 1 cut(s) 2153
AoxI GGCC 5 cut(s) 847, 1300, 1921, 2059, 2483
ApeKI GCWGC 6 cut(s) 49, 80, 630, 705, 1286, 2714
ApoI RAATTY 4 cut(s) 763, 1024, 1518, 1938
AseI ATTAAT 2 cut(s) 965, 1077
AspS9I GGNCC 6 cut(s) 395, 467, 514, 1485, 1622, 1823
AsuC2I CCSGG 1 cut(s) 2255
AsuHPI GGTGA 3 cut(s) 1236, 2135, 2695
AvaII GGWCC 6 cut(s) 395, 467, 514, 1485, 1622, 1823
BaeGI GKGCMC 1 cut(s) 858
BalI TGGCCA 1 cut(s) 1923
BamHI GGATCC 2 cut(s) 1160, 2392
BanI GGYRCC 2 cut(s) 853, 2198
BanII GRGCYC 2 cut(s) 1866, 2028
BauI CACGAG 2 cut(s) 53, 2034
BbsI GAAGAC 2 cut(s) 1348, 2185
Bbv12I GWGCWC 3 cut(s) 1710, 1866, 2028
BbvI GCAGC 6 cut(s) 36, 92, 642, 717, 1273, 2701
BccI CCATC 4 cut(s) 371, 964, 1534, 1874
BceAI ACGGC 2 cut(s) 62, 1704
BciT130I CCWGG 5 cut(s) 374, 570, 851, 1304, 1925
BclI TGATCA 1 cut(s) 1534
BcnI CCSGG 1 cut(s) 2255
BcoDI GTCTC 5 cut(s) 263, 556, 669, 1025, 2324
BfaI CTAG 7 cut(s) 258, 494, 1181, 1352, 1598, 1818, 2478
BfmI CTRYAG 4 cut(s) 284, 408, 1118, 1291
BglII AGATCT 1 cut(s) 1427
BisI GCNGC 7 cut(s) 50, 81, 631, 706, 1287, 2202, 2715
BlsI GCNGC 7 cut(s) 51, 82, 632, 707, 1288, 2203, 2716
Bme1390I CCNGG 6 cut(s) 374, 570, 851, 1304, 1925, 2255
Bme18I GGWCC 6 cut(s) 395, 467, 514, 1485, 1622, 1823
BmgBI CACGTC 1 cut(s) 2437
BmgT120I GGNCC 6 cut(s) 395, 467, 514, 1485, 1622, 1823
BmiI GGNNCC 6 cut(s) 855, 1084, 1162, 1624, 2200, 2394
BmrFI CCNGG 6 cut(s) 374, 570, 851, 1304, 1925, 2255
BmrI ACTGGG 2 cut(s) 190, 2390
BmsI GCATC 5 cut(s) 147, 344, 717, 904, 1340
BmuI ACTGGG 2 cut(s) 190, 2390
BoxI GACNNNNGTC 1 cut(s) 1352
BpiI GAAGAC 2 cut(s) 1348, 2185
BpmI CTGGAG 3 cut(s) 761, 987, 1677
BpuEI CTTGAG 3 cut(s) 21, 1850, 2349
BpuMI CCSGG 1 cut(s) 2255
Bsa29I ATCGAT 1 cut(s) 1784
BsaHI GRCGYC 1 cut(s) 1606
BsaI GGTCTC 1 cut(s) 2324
BsaJI CCNNGG 2 cut(s) 2016, 2787
BsaWI WCCGGW 2 cut(s) 1450, 2153
BsaXI ACNNNNNCTCC 2 cut(s) 608, 638
Bsc4I CCNNNNNNNGG 8 cut(s) 207, 485, 1344, 1453, 2145, 2160, 2582, 2672
Bse118I RCCGGY 1 cut(s) 2726
Bse1I ACTGG 7 cut(s) 185, 548, 706, 850, 1530, 2174, 2385
Bse3DI GCAATG 2 cut(s) 1131, 2637
BseAI TCCGGA 1 cut(s) 2153
BseBI CCWGG 5 cut(s) 374, 570, 851, 1304, 1925
BseCI ATCGAT 1 cut(s) 1784
BseDI CCNNGG 2 cut(s) 2016, 2787
BseGI GGATG 7 cut(s) 133, 382, 708, 1390, 1474, 1526, 2797
BseLI CCNNNNNNNGG 8 cut(s) 207, 485, 1344, 1453, 2145, 2160, 2582, 2672
BseMI GCAATG 2 cut(s) 1131, 2637
BseMII CTCAG 5 cut(s) 136, 270, 808, 1425, 1460
BseNI ACTGG 7 cut(s) 185, 548, 706, 850, 1530, 2174, 2385
BseRI GAGGAG 1 cut(s) 2013
BseSI GKGCMC 1 cut(s) 858
BseXI GCAGC 6 cut(s) 36, 92, 642, 717, 1273, 2701
BsgI GTGCAG 2 cut(s) 549, 806
Bsh1236I CGCG 1 cut(s) 2204
BshFI GGCC 5 cut(s) 849, 1302, 1923, 2061, 2485
BshNI GGYRCC 2 cut(s) 853, 2198
BshVI ATCGAT 1 cut(s) 1784
BsiHKAI GWGCWC 3 cut(s) 1710, 1866, 2028
BsiSI CCGG 6 cut(s) 627, 1299, 1451, 2154, 2254, 2727
BslFI GGGAC 8 cut(s) 336, 574, 983, 1005, 1617, 2147, 2270, 2389
BslI CCNNNNNNNGG 8 cut(s) 207, 485, 1344, 1453, 2145, 2160, 2582, 2672
BsmAI GTCTC 5 cut(s) 263, 556, 669, 1025, 2324
BsmFI GGGAC 8 cut(s) 336, 574, 983, 1005, 1617, 2147, 2270, 2389
BsmI GAATGC 1 cut(s) 633
BsnI GGCC 5 cut(s) 849, 1302, 1923, 2061, 2485
Bso31I GGTCTC 1 cut(s) 2324
Bsp1286I GDGCHC 4 cut(s) 858, 1710, 1866, 2028
Bsp13I TCCGGA 1 cut(s) 2153
Bsp1407I TGTACA 1 cut(s) 2550
BspACI CCGC 2 cut(s) 249, 2202
BspANI GGCC 5 cut(s) 849, 1302, 1923, 2061, 2485
BspCNI CTCAG 5 cut(s) 135, 271, 807, 1424, 1461
BspDI ATCGAT 1 cut(s) 1784
BspEI TCCGGA 1 cut(s) 2153
BspFNI CGCG 1 cut(s) 2204
BspHI TCATGA 1 cut(s) 2224
BspLI GGNNCC 6 cut(s) 855, 1084, 1162, 1624, 2200, 2394
BspMAI CTGCAG 1 cut(s) 1122
BspQI GCTCTTC 1 cut(s) 1854
BspT107I GGYRCC 2 cut(s) 853, 2198
BspTNI GGTCTC 1 cut(s) 2324
BsrDI GCAATG 2 cut(s) 1131, 2637
BsrFI RCCGGY 1 cut(s) 2726
BsrGI TGTACA 1 cut(s) 2550
BsrI ACTGG 7 cut(s) 185, 548, 706, 850, 1530, 2174, 2385
BssAI RCCGGY 1 cut(s) 2726
BssECI CCNNGG 2 cut(s) 2016, 2787
BssNI GRCGYC 1 cut(s) 1606
BssSI CACGAG 2 cut(s) 53, 2034
Bst2BI CACGAG 2 cut(s) 53, 2034
Bst2UI CCWGG 5 cut(s) 374, 570, 851, 1304, 1925
Bst6I CTCTTC 3 cut(s) 1437, 1748, 1854
BstACI GRCGYC 1 cut(s) 1606
BstAPI GCANNNNNTGC 2 cut(s) 2198, 2306
BstAUI TGTACA 1 cut(s) 2550
BstC8I GCNNGC 1 cut(s) 251
BstDEI CTNAG 6 cut(s) 122, 279, 794, 1411, 1469, 1583
BstF5I GGATG 7 cut(s) 133, 382, 708, 1390, 1474, 1526, 2797
BstFNI CGCG 1 cut(s) 2204
BstMAI GTCTC 5 cut(s) 263, 556, 669, 1025, 2324
BstMWI GCNNNNNNNGC 5 cut(s) 1142, 2198, 2306, 2491, 2723
BstNI CCWGG 5 cut(s) 374, 570, 851, 1304, 1925
BstNSI RCATGY 1 cut(s) 2234
BstPAI GACNNNNGTC 1 cut(s) 1352
BstSCI CCNGG 6 cut(s) 372, 568, 849, 1302, 1923, 2253
BstSFI CTRYAG 4 cut(s) 284, 408, 1118, 1291
BstSLI GKGCMC 1 cut(s) 858
BstUI CGCG 1 cut(s) 2204
BstV1I GCAGC 6 cut(s) 36, 92, 642, 717, 1273, 2701
BstV2I GAAGAC 2 cut(s) 1348, 2185
BstX2I RGATCY 6 cut(s) 166, 416, 1160, 1427, 1907, 2392
BstYI RGATCY 6 cut(s) 166, 416, 1160, 1427, 1907, 2392
Bsu15I ATCGAT 1 cut(s) 1784
BsuRI GGCC 5 cut(s) 849, 1302, 1923, 2061, 2485
BsuTUI ATCGAT 1 cut(s) 1784
BtrI CACGTC 1 cut(s) 2437
BtsCI GGATG 7 cut(s) 133, 382, 708, 1390, 1474, 1526, 2797
BtsI GCAGTG 2 cut(s) 213, 1819
BtsIMutI CAGTG 6 cut(s) 213, 1041, 1466, 1537, 1819, 2378
Cac8I GCNNGC 1 cut(s) 251
CaiI CAGNNNCTG 1 cut(s) 292
CciI TCATGA 1 cut(s) 2224
Cfr10I RCCGGY 1 cut(s) 2726
Cfr13I GGNCC 6 cut(s) 395, 467, 514, 1485, 1622, 1823
ClaI ATCGAT 1 cut(s) 1784
CseI GACGC 1 cut(s) 906
CsiI ACCWGGT 1 cut(s) 568
Csp6I GTAC 7 cut(s) 749, 782, 1065, 2039, 2519, 2551, 2730
CviAII CATG 6 cut(s) 235, 871, 1219, 1390, 2225, 2231
CviQI GTAC 7 cut(s) 749, 782, 1065, 2039, 2519, 2551, 2730
DdeI CTNAG 6 cut(s) 122, 279, 794, 1411, 1469, 1583
DraI TTTAAA 2 cut(s) 423, 2295
DraIII CACNNNGTG 1 cut(s) 2198
EaeI YGGCCR 2 cut(s) 1300, 1921
Eam1104I CTCTTC 3 cut(s) 1437, 1748, 1854
EarI CTCTTC 3 cut(s) 1437, 1748, 1854
Ecl136II GAGCTC 2 cut(s) 1864, 2026
Eco24I GRGCYC 2 cut(s) 1866, 2028
Eco31I GGTCTC 1 cut(s) 2324
Eco32I GATATC 1 cut(s) 265
Eco47I GGWCC 6 cut(s) 395, 467, 514, 1485, 1622, 1823
Eco53kI GAGCTC 2 cut(s) 1864, 2026
Eco57I CTGAAG 4 cut(s) 338, 971, 1418, 2733
EcoICRI GAGCTC 2 cut(s) 1864, 2026
EcoRI GAATTC 1 cut(s) 1938
EcoRII CCWGG 5 cut(s) 372, 568, 849, 1302, 1923
EcoRV GATATC 1 cut(s) 265
EcoT38I GRGCYC 2 cut(s) 1866, 2028
FaeI CATG 6 cut(s) 238, 874, 1222, 1393, 2228, 2234
FalI AAGNNNNNCTT 2 cut(s) 2178, 2210
FaqI GGGAC 8 cut(s) 336, 574, 983, 1005, 1617, 2147, 2270, 2389
FatI CATG 6 cut(s) 234, 870, 1218, 1389, 2224, 2230
FauI CCCGC 1 cut(s) 242
FbaI TGATCA 1 cut(s) 1534
Fnu4HI GCNGC 7 cut(s) 50, 81, 631, 706, 1287, 2202, 2715
FokI GGATG 7 cut(s) 140, 389, 695, 1397, 1461, 1513, 2804
FriOI GRGCYC 2 cut(s) 1866, 2028
Fsp4HI GCNGC 7 cut(s) 50, 81, 631, 706, 1287, 2202, 2715
FspBI CTAG 7 cut(s) 258, 494, 1181, 1352, 1598, 1818, 2478
GluI GCNGC 7 cut(s) 50, 81, 631, 706, 1287, 2202, 2715
GsuI CTGGAG 3 cut(s) 761, 987, 1677
HaeIII GGCC 5 cut(s) 849, 1302, 1923, 2061, 2485
HapII CCGG 6 cut(s) 627, 1299, 1451, 2154, 2254, 2727
HgaI GACGC 1 cut(s) 906
Hin1I GRCGYC 1 cut(s) 1606
Hin1II CATG 6 cut(s) 238, 874, 1222, 1393, 2228, 2234
HincII GTYRAC 2 cut(s) 1186, 2421
HindII GTYRAC 2 cut(s) 1186, 2421
HindIII AAGCTT 1 cut(s) 1404
HpaII CCGG 6 cut(s) 627, 1299, 1451, 2154, 2254, 2727
HphI GGTGA 3 cut(s) 1236, 2135, 2695
Hpy166II GTNNAC 5 cut(s) 1186, 1244, 2421, 2745, 2797
Hpy8I GTNNAC 5 cut(s) 1186, 1244, 2421, 2745, 2797
Hpy99I CGWCG 1 cut(s) 2438
HpyAV CCTTC 7 cut(s) 179, 313, 489, 723, 1028, 1457, 2475
HpyCH4IV ACGT 2 cut(s) 1606, 2436
HpyF10VI GCNNNNNNNGC 5 cut(s) 1142, 2198, 2306, 2491, 2723
HpyF3I CTNAG 6 cut(s) 122, 279, 794, 1411, 1469, 1583
HpySE526I ACGT 2 cut(s) 1606, 2436
Hsp92I GRCGYC 1 cut(s) 1606
Hsp92II CATG 6 cut(s) 238, 874, 1222, 1393, 2228, 2234
Kpn2I TCCGGA 1 cut(s) 2153
Ksp22I TGATCA 1 cut(s) 1534
LguI GCTCTTC 1 cut(s) 1854
LmnI GCTCC 4 cut(s) 1713, 1838, 2031, 2464
Lsp1109I GCAGC 6 cut(s) 36, 92, 642, 717, 1273, 2701
LweI GCATC 5 cut(s) 147, 344, 717, 904, 1340
MabI ACCWGGT 1 cut(s) 568
MaeI CTAG 7 cut(s) 258, 494, 1181, 1352, 1598, 1818, 2478
MaeII ACGT 2 cut(s) 1606, 2436
MboII GAAGA 9 cut(s) 1135, 1348, 1424, 1765, 1871, 1934, 2190, 2213, 2657
MfeI CAATTG 5 cut(s) 339, 1100, 1149, 1692, 2331
MflI RGATCY 6 cut(s) 166, 416, 1160, 1427, 1907, 2392
MhlI GDGCHC 4 cut(s) 858, 1710, 1866, 2028
MlsI TGGCCA 1 cut(s) 1923
MluNI TGGCCA 1 cut(s) 1923
MlyI GAGTC 5 cut(s) 1216, 1342, 1480, 1603, 2404
MmeI TCCRAC 5 cut(s) 855, 1188, 1970, 2145, 2442
Mox20I TGGCCA 1 cut(s) 1923
MroI TCCGGA 1 cut(s) 2153
MscI TGGCCA 1 cut(s) 1923
MslI CAYNNNNRTG 1 cut(s) 2229
Msp20I TGGCCA 1 cut(s) 1923
MspI CCGG 6 cut(s) 627, 1299, 1451, 2154, 2254, 2727
MspR9I CCNGG 6 cut(s) 374, 570, 851, 1304, 1925, 2255
MunI CAATTG 5 cut(s) 339, 1100, 1149, 1692, 2331
Mva1269I GAATGC 1 cut(s) 633
MvaI CCWGG 5 cut(s) 374, 570, 851, 1304, 1925
MvnI CGCG 1 cut(s) 2204
MwoI GCNNNNNNNGC 5 cut(s) 1142, 2198, 2306, 2491, 2723
NciI CCSGG 1 cut(s) 2255
NlaIII CATG 6 cut(s) 238, 874, 1222, 1393, 2228, 2234
NlaIV GGNNCC 6 cut(s) 855, 1084, 1162, 1624, 2200, 2394
NmeAIII GCCGAG 1 cut(s) 2041
NspI RCATGY 1 cut(s) 2234
PagI TCATGA 1 cut(s) 2224
PciSI GCTCTTC 1 cut(s) 1854
PctI GAATGC 1 cut(s) 633
PflMI CCANNNNNTGG 1 cut(s) 2582
PfoI TCCNGGA 1 cut(s) 372
PkrI GCNGC 7 cut(s) 51, 82, 632, 707, 1288, 2203, 2716
PleI GAGTC 5 cut(s) 1215, 1342, 1479, 1602, 2404
PpsI GAGTC 5 cut(s) 1215, 1342, 1479, 1602, 2404
PshAI GACNNNNGTC 1 cut(s) 1352
PshBI ATTAAT 2 cut(s) 965, 1077
Psp124BI GAGCTC 2 cut(s) 1866, 2028
Psp6I CCWGG 5 cut(s) 372, 568, 849, 1302, 1923
PspGI CCWGG 5 cut(s) 372, 568, 849, 1302, 1923
PspN4I GGNNCC 6 cut(s) 855, 1084, 1162, 1624, 2200, 2394
PspPI GGNCC 6 cut(s) 395, 467, 514, 1485, 1622, 1823
PstI CTGCAG 1 cut(s) 1122
PstNI CAGNNNCTG 1 cut(s) 292
PsuI RGATCY 6 cut(s) 166, 416, 1160, 1427, 1907, 2392
RsaI GTAC 7 cut(s) 750, 783, 1066, 2040, 2520, 2552, 2731
RsaNI GTAC 7 cut(s) 749, 782, 1065, 2039, 2519, 2551, 2730
RseI CAYNNNNRTG 1 cut(s) 2229
SacI GAGCTC 2 cut(s) 1866, 2028
SapI GCTCTTC 1 cut(s) 1854
SatI GCNGC 7 cut(s) 50, 81, 631, 706, 1287, 2202, 2715
Sau96I GGNCC 6 cut(s) 395, 467, 514, 1485, 1622, 1823
SchI GAGTC 5 cut(s) 1216, 1342, 1480, 1603, 2404
ScrFI CCNGG 6 cut(s) 374, 570, 851, 1304, 1925, 2255
SduI GDGCHC 4 cut(s) 858, 1710, 1866, 2028
SexAI ACCWGGT 1 cut(s) 568
SfaNI GCATC 5 cut(s) 147, 344, 717, 904, 1340
SfcI CTRYAG 4 cut(s) 284, 408, 1118, 1291
SinI GGWCC 6 cut(s) 395, 467, 514, 1485, 1622, 1823
SmiI ATTTAAAT 1 cut(s) 2295
SmiMI CAYNNNNRTG 1 cut(s) 2229
SmlI CTYRAG 3 cut(s) 36, 1865, 2364
SmoI CTYRAG 3 cut(s) 36, 1865, 2364
SsiI CCGC 2 cut(s) 249, 2202
SspI AATATT 3 cut(s) 1090, 2097, 2402
SspMI CTAG 7 cut(s) 258, 494, 1181, 1352, 1598, 1818, 2478
SstI GAGCTC 2 cut(s) 1866, 2028
StyD4I CCNGG 6 cut(s) 372, 568, 849, 1302, 1923, 2253
SwaI ATTTAAAT 1 cut(s) 2295
TaiI ACGT 2 cut(s) 1609, 2439
TaqI TCGA 6 cut(s) 28, 267, 1259, 1784, 2283, 2540
TatI WGTACW 2 cut(s) 2038, 2550
TauI GCSGC 1 cut(s) 2204
TscAI CASTG 6 cut(s) 220, 1041, 1473, 1537, 1819, 2385
TseI GCWGC 6 cut(s) 49, 80, 630, 705, 1286, 2714
TspDTI ATGAA 8 cut(s) 144, 593, 756, 1406, 1704, 2213, 2241, 2569
TspGWI ACGGA 2 cut(s) 223, 1360
TspRI CASTG 6 cut(s) 220, 1041, 1473, 1537, 1819, 2385
Van91I CCANNNNNTGG 1 cut(s) 2582
VpaK11BI GGWCC 6 cut(s) 395, 467, 514, 1485, 1622, 1823
VspI ATTAAT 2 cut(s) 965, 1077
XapI RAATTY 4 cut(s) 763, 1024, 1518, 1938
XbaI TCTAGA 1 cut(s) 1597
XceI RCATGY 1 cut(s) 2234
XspI CTAG 7 cut(s) 258, 494, 1181, 1352, 1598, 1818, 2478
ZraI GACGTC 1 cut(s) 1607
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.