FvH4_1g08660

RRP12-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000835
Physical Location & Seq
Forward (+)
4598250 .. 4601866
3617 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g08660.t1

Sequence Viewer

Length: 1740 bp
ATGGAAGCCCTCACCGCCATACACGACGGAGACGACGCCAACATCGGCGCCGCGATTCTGATGCGCTTCACCGACAGCAACCGCGAACTCGACCTCGAAATCCGCAAACTCATCGTCGTCATGTCCGGGATATTCCGAAACCAAAATGCACCCCCGACGCCGGTGGGCTACTTGTGCGCCACGTGCTCCTCCCTCGACATCGCCGCCGCCTCCGATCCCCAAGCTCCCGCTCACGTGCTCGACGCCCACTTCACCATTATGTCCATCGTCATCCCAAAAGTCCCTGCTGCGTTTCTGATCAACAATCTCCGGCAGGTCTTTGATTCCTTAGCACGACCTCTCTGGTCTTCGTCTCCGAGTACCGACTGCTTAGAAGTGAGATGCATTGCTCAGTTGTTCATTGCCGCCGCAAAAGTCGTCAACAATTGGTCAGATGTTTCGGAATTATTCAGCTCCTTCCTCAGCTTGGCATTCCTTGACGGCCTCAAGGTGAGAAGTCAATTGTGTTTGTGTCTTCCTGATGTACTGCGAAGTTTTCAAGGAACACCGCTATTTGCCCCTGCAACCAAACAGATTACCGACTTGTTGAATAAGTATCCTCCACTAGTGGACTGTGATGAAAATGCTAGTGCATCTGTTCGCTCCCAACAAGCCAAGGCCTTGGGTAGTTTGCATGTTGTGAAAGTACCTCTTTCCCTTTTGTCAGCCGATGACAGAACTGCTGTGCTTGTCTACTTTAAAACTCTCTTGGAACTGAACCAATTCTTTGTTACCGCACCGATCATTGATGGTTTGTATAGACTTTGTCTCGACCCATCTGCATATGTTTCTCCTGAATTGTTGCTCGATCTAGTACTCTCATTATGCCTTCTTGTCACCCAAGATAATCTGATGTGCATCCCGGTAACTACAGCTGGTTTTCTCAGTATTGGACTGACGAGAGTTTATTCCTTTAACCGGAAAGTCTGTGAAATTAATCTCCCTATTGTGTTTGATGCACTCAAAGTGATATTGGAAGACCCTAACTCAAGCTACATTCCTGATCCGGTGCATGCATTCAGGTGTCTAATTCATGCTTGTATTGATGAAAGCTTAATCAAAGAGGGAGTTGACCGTGTGGTGATGAATGCAAGCATGGGTGATGGAATCAAGTCTGAGCCAACTATAATTGAAAATTTGTGTGCTACTATTGAAAGCCTGCTTTATTCAAAGCCTAATATTCAATGCCCGCGTGATTATCGCATGTTTACTTTCTTTACCTGGGCCCCTGCATTTGATGTTGTTTCAACAATGTTCGAGAAACTAGGGCCGTACTCTTCTTTTCTGATGAGGGGTACACTGAAGACTTTGGCAGACATGCAGAAATTGCCTGATAGAGAATTCCATTTCAAGGAAGTGAAGATTAAGCGTCTTCTGGAAAAGCTTGTTCAGAAATATGGGCTTGATGCTATTATGGCCTTTATGCCTCAAGAACTCAAGAATCTGCTTGTAGAGACCAATGAAAAGGCTTCTAAACCTGTGGAAGTGATATCTCATGTTCTGGGAGCAACTGCAGTCAGGTCTGAGAGTAGCAATAATAGAATGCACGTTAAAGCACTTGGACCGTGCAAGAATTCAAAATGGAAAAGGGATATTCAAGGTAATGGGTTGCGTGATCGGCTAGCTAGGAGTAGAGCTAAGAGAGAGATGACAAACAGGATGTTGGGTGCAGCTGTGATGGCAAAGGAGCTAAAAATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NUC173

Protein Analysis

580

Amino Acids

64.21

Weight (kDa)

7.46

Isoelectric Point (pI)

36.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HEAT_RRP12_N PF25772 7 - 274 1.5e-52 RRP12-like, N-terminal HEAT repeats
RRP12_HEAT PF08161 352 - 494 1.2e-09 Ribosomal RNA-processing protein 12, HEAT repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 304
AccB1I GGYRCC 1 cut(s) 47
AccBSI CCGCTC 1 cut(s) 230
AccI GTMKAC 1 cut(s) 732
AccII CGCG 3 cut(s) 53, 84, 1231
AclWI GGATC 2 cut(s) 209, 1037
AcsI RAATTY 3 cut(s) 1174, 1379, 1612
AcuI CTGAAG 1 cut(s) 1361
AcvI CACGTG 2 cut(s) 183, 235
AcyI GRCGYC 4 cut(s) 36, 48, 158, 243
AfaI GTAC 6 cut(s) 361, 525, 687, 855, 1313, 1336
AfiI CCNNNNNNNGG 4 cut(s) 160, 466, 957, 1390
AhlI ACTAGT 1 cut(s) 604
AjnI CCWGG 1 cut(s) 1259
Alw21I GWGCWC 2 cut(s) 188, 240
Alw26I GTCTC 4 cut(s) 24, 357, 812, 1487
AlwI GGATC 2 cut(s) 209, 1037
AoxI GGCC 5 cut(s) 481, 657, 1263, 1307, 1455
ApaI GGGCCC 1 cut(s) 1267
ApeKI GCWGC 2 cut(s) 287, 1709
ApoI RAATTY 3 cut(s) 1174, 1379, 1612
ArsI GACNNNNNNTTYG 2 cut(s) 99, 131
AseI ATTAAT 1 cut(s) 975
Asp700I GAANNNNTTC 1 cut(s) 761
AspLEI GCGC 3 cut(s) 50, 66, 179
AspS9I GGNCC 4 cut(s) 1263, 1264, 1307, 1601
AsuC2I CCSGG 2 cut(s) 127, 902
AsuHPI GGTGA 7 cut(s) 4, 61, 244, 502, 868, 1132, 1151
AsuNHI GCTAGC 1 cut(s) 1660
AvaII GGWCC 1 cut(s) 1601
BaeGI GKGCMC 1 cut(s) 1267
BanI GGYRCC 1 cut(s) 47
BanII GRGCYC 1 cut(s) 1267
BbrPI CACGTG 2 cut(s) 183, 235
BbsI GAAGAC 5 cut(s) 339, 506, 1023, 1349, 1403
Bbv12I GWGCWC 2 cut(s) 188, 240
BbvCI CCTCAGC 1 cut(s) 461
BbvI GCAGC 2 cut(s) 274, 1721
BccI CCATC 5 cut(s) 272, 782, 823, 1136, 1711
BceAI ACGGC 2 cut(s) 496, 1294
BcgI CGANNNNNNTGC 6 cut(s) 43, 77, 94, 128, 800, 834
BciT130I CCWGG 1 cut(s) 1261
BciVI GTATCC 1 cut(s) 606
BclI TGATCA 1 cut(s) 297
BcnI CCSGG 2 cut(s) 127, 902
BcoDI GTCTC 4 cut(s) 24, 357, 812, 1487
BcuI ACTAGT 1 cut(s) 604
BfaI CTAG 7 cut(s) 605, 627, 851, 1304, 1661, 1665, 1738
BfmI CTRYAG 2 cut(s) 909, 1551
BfoI RGCGCY 1 cut(s) 51
BfuAI ACCTGC 1 cut(s) 304
BfuI GTATCC 1 cut(s) 606
BisI GCNGC 7 cut(s) 51, 204, 207, 288, 405, 408, 1710
BlsI GCNGC 7 cut(s) 52, 205, 208, 289, 406, 409, 1711
BmcAI AGTACT 1 cut(s) 855
Bme1390I CCNGG 3 cut(s) 127, 902, 1261
Bme18I GGWCC 1 cut(s) 1601
BmgT120I GGNCC 4 cut(s) 1263, 1264, 1307, 1601
BmiI GGNNCC 3 cut(s) 49, 1265, 1266
BmrFI CCNGG 3 cut(s) 127, 902, 1261
BmsI GCATC 6 cut(s) 51, 371, 641, 906, 985, 1435
BmtI GCTAGC 1 cut(s) 1664
BpiI GAAGAC 5 cut(s) 339, 506, 1023, 1349, 1403
Bpu10I CCTNAGC 2 cut(s) 328, 461
BpuEI CTTGAG 4 cut(s) 470, 1012, 1452, 1460
BpuMI CCSGG 2 cut(s) 127, 902
BsaAI YACGTR 2 cut(s) 183, 235
BsaBI GATNNNNATC 1 cut(s) 896
BsaHI GRCGYC 4 cut(s) 36, 48, 158, 243
BsaI GGTCTC 1 cut(s) 1487
BsaJI CCNNGG 3 cut(s) 654, 660, 1260
BsaWI WCCGGW 2 cut(s) 957, 1045
Bsc4I CCNNNNNNNGG 4 cut(s) 160, 466, 957, 1390
Bse118I RCCGGY 1 cut(s) 160
Bse3DI GCAATG 2 cut(s) 384, 399
Bse8I GATNNNNATC 1 cut(s) 896
BseBI CCWGG 1 cut(s) 1261
BseDI CCNNGG 3 cut(s) 654, 660, 1260
BseGI GGATG 3 cut(s) 270, 897, 1704
BseJI GATNNNNATC 1 cut(s) 896
BseLI CCNNNNNNNGG 4 cut(s) 160, 466, 957, 1390
BseMI GCAATG 2 cut(s) 384, 399
BseMII CTCAG 5 cut(s) 404, 475, 937, 1146, 1554
BseRI GAGGAG 1 cut(s) 178
BseSI GKGCMC 1 cut(s) 1267
BseXI GCAGC 2 cut(s) 274, 1721
BsgI GTGCAG 1 cut(s) 1728
Bsh1236I CGCG 3 cut(s) 53, 84, 1231
BshFI GGCC 5 cut(s) 483, 659, 1265, 1309, 1457
BshNI GGYRCC 1 cut(s) 47
BsiHKAI GWGCWC 2 cut(s) 188, 240
BsiSI CCGG 6 cut(s) 126, 161, 310, 902, 958, 1046
BslFI GGGAC 1 cut(s) 266
BslI CCNNNNNNNGG 4 cut(s) 160, 466, 957, 1390
BsmAI GTCTC 4 cut(s) 24, 357, 812, 1487
BsmBI CGTCTC 2 cut(s) 24, 357
BsmFI GGGAC 1 cut(s) 266
BsmI GAATGC 4 cut(s) 470, 1055, 1132, 1587
BsnI GGCC 5 cut(s) 483, 659, 1265, 1309, 1457
Bso31I GGTCTC 1 cut(s) 1487
Bsp120I GGGCCC 1 cut(s) 1263
Bsp1286I GDGCHC 3 cut(s) 188, 240, 1267
Bsp143I GATC 6 cut(s) 214, 297, 780, 847, 1042, 1654
BspANI GGCC 5 cut(s) 483, 659, 1265, 1309, 1457
BspCNI CTCAG 5 cut(s) 403, 474, 936, 1147, 1555
BspFNI CGCG 3 cut(s) 53, 84, 1231
BspLI GGNNCC 3 cut(s) 49, 1265, 1266
BspMAI CTGCAG 1 cut(s) 1555
BspMI ACCTGC 1 cut(s) 304
BspOI GCTAGC 1 cut(s) 1664
BspPI GGATC 2 cut(s) 209, 1037
BspT107I GGYRCC 1 cut(s) 47
BspTNI GGTCTC 1 cut(s) 1487
BsrBI CCGCTC 1 cut(s) 230
BsrDI GCAATG 2 cut(s) 384, 399
BsrFI RCCGGY 1 cut(s) 160
BssAI RCCGGY 1 cut(s) 160
BssECI CCNNGG 3 cut(s) 654, 660, 1260
BssMI GATC 6 cut(s) 214, 297, 780, 847, 1042, 1654
BssNI GRCGYC 4 cut(s) 36, 48, 158, 243
BssT1I CCWWGG 2 cut(s) 654, 660
Bst2UI CCWGG 1 cut(s) 1261
Bst4CI ACNGT 3 cut(s) 614, 1115, 1605
Bst6I CTCTTC 1 cut(s) 1321
BstACI GRCGYC 4 cut(s) 36, 48, 158, 243
BstAPI GCANNNNNTGC 1 cut(s) 1366
BstBAI YACGTR 2 cut(s) 183, 235
BstC8I GCNNGC 5 cut(s) 1053, 1132, 1199, 1229, 1662
BstDEI CTNAG 8 cut(s) 328, 370, 390, 461, 923, 1155, 1563, 1677
BstF5I GGATG 3 cut(s) 270, 897, 1704
BstFNI CGCG 3 cut(s) 53, 84, 1231
BstH2I RGCGCY 1 cut(s) 51
BstHHI GCGC 3 cut(s) 50, 66, 179
BstKTI GATC 6 cut(s) 217, 300, 783, 850, 1045, 1657
BstMAI GTCTC 4 cut(s) 24, 357, 812, 1487
BstMBI GATC 6 cut(s) 214, 297, 780, 847, 1042, 1654
BstMWI GCNNNNNNNGC 7 cut(s) 14, 174, 183, 1366, 1454, 1657, 1718
BstNI CCWGG 1 cut(s) 1261
BstNSI RCATGY 4 cut(s) 677, 1055, 1246, 1360
BstSCI CCNGG 3 cut(s) 125, 900, 1259
BstSFI CTRYAG 2 cut(s) 909, 1551
BstSLI GKGCMC 1 cut(s) 1267
BstUI CGCG 3 cut(s) 53, 84, 1231
BstV1I GCAGC 2 cut(s) 274, 1721
BstV2I GAAGAC 5 cut(s) 339, 506, 1023, 1349, 1403
BstXI CCANNNNNNTGG 1 cut(s) 661
BsuI GTATCC 1 cut(s) 606
BsuRI GGCC 5 cut(s) 483, 659, 1265, 1309, 1457
BtgZI GCGATG 1 cut(s) 184
BtsCI GGATG 3 cut(s) 270, 897, 1704
BtsIMutI CAGTG 1 cut(s) 1337
BveI ACCTGC 1 cut(s) 304
Cac8I GCNNGC 5 cut(s) 1053, 1132, 1199, 1229, 1662
CfoI GCGC 3 cut(s) 50, 66, 179
Cfr10I RCCGGY 1 cut(s) 160
Cfr13I GGNCC 4 cut(s) 1263, 1264, 1307, 1601
CseI GACGC 4 cut(s) 44, 166, 251, 1397
Csp6I GTAC 6 cut(s) 360, 524, 686, 854, 1312, 1335
CviAII CATG 8 cut(s) 121, 674, 1052, 1073, 1135, 1243, 1357, 1535
CviQI GTAC 6 cut(s) 360, 524, 686, 854, 1312, 1335
DdeI CTNAG 8 cut(s) 328, 370, 390, 461, 923, 1155, 1563, 1677
DinI GGCGCC 1 cut(s) 49
DpnI GATC 6 cut(s) 216, 299, 782, 849, 1044, 1656
DpnII GATC 6 cut(s) 214, 297, 780, 847, 1042, 1654
DraI TTTAAA 1 cut(s) 739
Eam1104I CTCTTC 1 cut(s) 1321
EarI CTCTTC 1 cut(s) 1321
Eco130I CCWWGG 2 cut(s) 654, 660
Eco147I AGGCCT 1 cut(s) 659
Eco24I GRGCYC 1 cut(s) 1267
Eco31I GGTCTC 1 cut(s) 1487
Eco32I GATATC 1 cut(s) 1530
Eco47I GGWCC 1 cut(s) 1601
Eco57I CTGAAG 1 cut(s) 1361
Eco72I CACGTG 2 cut(s) 183, 235
EcoO109I RGGNCCY 1 cut(s) 1264
EcoRI GAATTC 2 cut(s) 1379, 1612
EcoRII CCWGG 1 cut(s) 1259
EcoRV GATATC 1 cut(s) 1530
EcoT14I CCWWGG 2 cut(s) 654, 660
EcoT22I ATGCAT 2 cut(s) 386, 1057
EcoT38I GRGCYC 1 cut(s) 1267
EgeI GGCGCC 1 cut(s) 49
EheI GGCGCC 1 cut(s) 49
ErhI CCWWGG 2 cut(s) 654, 660
Esp3I CGTCTC 2 cut(s) 24, 357
FaeI CATG 8 cut(s) 124, 677, 1055, 1076, 1138, 1246, 1360, 1538
FalI AAGNNNNNCTT 2 cut(s) 675, 707
FaqI GGGAC 1 cut(s) 266
FatI CATG 8 cut(s) 120, 673, 1051, 1072, 1134, 1242, 1356, 1534
FauI CCCGC 2 cut(s) 235, 1236
FauNDI CATATG 1 cut(s) 823
FbaI TGATCA 1 cut(s) 297
FblI GTMKAC 1 cut(s) 732
Fnu4HI GCNGC 7 cut(s) 51, 204, 207, 288, 405, 408, 1710
FokI GGATG 3 cut(s) 257, 884, 1711
FriOI GRGCYC 1 cut(s) 1267
Fsp4HI GCNGC 7 cut(s) 51, 204, 207, 288, 405, 408, 1710
FspBI CTAG 7 cut(s) 605, 627, 851, 1304, 1661, 1665, 1738
GlaI GCGC 3 cut(s) 49, 65, 178
GluI GCNGC 7 cut(s) 51, 204, 207, 288, 405, 408, 1710
HaeII RGCGCY 1 cut(s) 51
HaeIII GGCC 5 cut(s) 483, 659, 1265, 1309, 1457
HapII CCGG 6 cut(s) 126, 161, 310, 902, 958, 1046
HgaI GACGC 4 cut(s) 44, 166, 251, 1397
HhaI GCGC 3 cut(s) 50, 66, 179
Hin1I GRCGYC 4 cut(s) 36, 48, 158, 243
Hin1II CATG 8 cut(s) 124, 677, 1055, 1076, 1138, 1246, 1360, 1538
Hin6I GCGC 3 cut(s) 48, 64, 177
HinP1I GCGC 3 cut(s) 48, 64, 177
HincII GTYRAC 2 cut(s) 421, 1111
HindII GTYRAC 2 cut(s) 421, 1111
HindIII AAGCTT 2 cut(s) 1090, 1421
HinfI GANTC 4 cut(s) 55, 323, 1146, 1480
HpaII CCGG 6 cut(s) 126, 161, 310, 902, 958, 1046
HphI GGTGA 7 cut(s) 4, 61, 244, 502, 868, 1132, 1151
Hpy166II GTNNAC 6 cut(s) 421, 610, 733, 1111, 1248, 1337
Hpy188III TCNNGA 8 cut(s) 518, 809, 833, 1040, 1297, 1415, 1469, 1477
Hpy8I GTNNAC 6 cut(s) 421, 610, 733, 1111, 1248, 1337
Hpy99I CGWCG 5 cut(s) 29, 38, 119, 160, 245
HpyAV CCTTC 2 cut(s) 466, 878
HpyCH4III ACNGT 3 cut(s) 614, 1115, 1605
HpyCH4IV ACGT 3 cut(s) 182, 234, 1587
HpyF10VI GCNNNNNNNGC 7 cut(s) 14, 174, 183, 1366, 1454, 1657, 1718
HpyF3I CTNAG 8 cut(s) 328, 370, 390, 461, 923, 1155, 1563, 1677
HpySE526I ACGT 3 cut(s) 182, 234, 1587
Hsp92I GRCGYC 4 cut(s) 36, 48, 158, 243
Hsp92II CATG 8 cut(s) 124, 677, 1055, 1076, 1138, 1246, 1360, 1538
HspAI GCGC 3 cut(s) 48, 64, 177
KasI GGCGCC 1 cut(s) 47
Ksp22I TGATCA 1 cut(s) 297
Kzo9I GATC 6 cut(s) 214, 297, 780, 847, 1042, 1654
LmnI GCTCC 6 cut(s) 191, 229, 458, 647, 1544, 1726
Lsp1109I GCAGC 2 cut(s) 274, 1721
LweI GCATC 6 cut(s) 51, 371, 641, 906, 985, 1435
MaeI CTAG 7 cut(s) 605, 627, 851, 1304, 1661, 1665, 1738
MaeII ACGT 3 cut(s) 182, 234, 1587
MaeIII GTNAC 3 cut(s) 769, 874, 904
MalI GATC 6 cut(s) 216, 299, 782, 849, 1044, 1656
MbiI CCGCTC 1 cut(s) 230
MboI GATC 6 cut(s) 214, 297, 780, 847, 1042, 1654
MboII GAAGA 7 cut(s) 339, 506, 1028, 1308, 1354, 1403, 1411
MfeI CAATTG 2 cut(s) 424, 500
MhlI GDGCHC 3 cut(s) 188, 240, 1267
Mly113I GGCGCC 1 cut(s) 48
Mph1103I ATGCAT 2 cut(s) 386, 1057
MroXI GAANNNNTTC 1 cut(s) 761
MseI TTAA 6 cut(s) 738, 954, 975, 1094, 1404, 1590
MslI CAYNNNNRTG 2 cut(s) 257, 1060
MspA1I CMGCKG 2 cut(s) 914, 1712
MspI CCGG 6 cut(s) 126, 161, 310, 902, 958, 1046
MspR9I CCNGG 3 cut(s) 127, 902, 1261
MunI CAATTG 2 cut(s) 424, 500
Mva1269I GAATGC 4 cut(s) 470, 1055, 1132, 1587
MvaI CCWGG 1 cut(s) 1261
MvnI CGCG 3 cut(s) 53, 84, 1231
MwoI GCNNNNNNNGC 7 cut(s) 14, 174, 183, 1366, 1454, 1657, 1718
NarI GGCGCC 1 cut(s) 48
NciI CCSGG 2 cut(s) 127, 902
NdeI CATATG 1 cut(s) 823
NdeII GATC 6 cut(s) 214, 297, 780, 847, 1042, 1654
NheI GCTAGC 1 cut(s) 1660
NlaIII CATG 8 cut(s) 124, 677, 1055, 1076, 1138, 1246, 1360, 1538
NlaIV GGNNCC 3 cut(s) 49, 1265, 1266
NmuCI GTSAC 1 cut(s) 874
NsiI ATGCAT 2 cut(s) 386, 1057
NspI RCATGY 4 cut(s) 677, 1055, 1246, 1360
PaeI GCATGC 1 cut(s) 1055
PceI AGGCCT 1 cut(s) 659
PcsI WCGNNNNNNNCGW 1 cut(s) 30
PctI GAATGC 4 cut(s) 470, 1055, 1132, 1587
PdmI GAANNNNTTC 1 cut(s) 761
PfeI GAWTC 4 cut(s) 55, 323, 1146, 1480
PflFI GACNNNGTC 1 cut(s) 804
PfoI TCCNGGA 1 cut(s) 125
PkrI GCNGC 7 cut(s) 52, 205, 208, 289, 406, 409, 1711
PluTI GGCGCC 1 cut(s) 51
PmaCI CACGTG 2 cut(s) 183, 235
PmlI CACGTG 2 cut(s) 183, 235
Ppu21I YACGTR 2 cut(s) 183, 235
PshBI ATTAAT 1 cut(s) 975
Psp6I CCWGG 1 cut(s) 1259
PspCI CACGTG 2 cut(s) 183, 235
PspGI CCWGG 1 cut(s) 1259
PspN4I GGNNCC 3 cut(s) 49, 1265, 1266
PspOMI GGGCCC 1 cut(s) 1263
PspPI GGNCC 4 cut(s) 1263, 1264, 1307, 1601
PstI CTGCAG 1 cut(s) 1555
PsyI GACNNNGTC 1 cut(s) 804
PvuII CAGCTG 2 cut(s) 914, 1712
RsaI GTAC 6 cut(s) 361, 525, 687, 855, 1313, 1336
RsaNI GTAC 6 cut(s) 360, 524, 686, 854, 1312, 1335
RseI CAYNNNNRTG 2 cut(s) 257, 1060
SaqAI TTAA 6 cut(s) 738, 954, 975, 1094, 1404, 1590
SatI GCNGC 7 cut(s) 51, 204, 207, 288, 405, 408, 1710
Sau3AI GATC 6 cut(s) 214, 297, 780, 847, 1042, 1654
Sau96I GGNCC 4 cut(s) 1263, 1264, 1307, 1601
ScaI AGTACT 1 cut(s) 855
ScrFI CCNGG 3 cut(s) 127, 902, 1261
SduI GDGCHC 3 cut(s) 188, 240, 1267
SfaNI GCATC 6 cut(s) 51, 371, 641, 906, 985, 1435
SfcI CTRYAG 2 cut(s) 909, 1551
SfoI GGCGCC 1 cut(s) 49
SgrAI CRCCGGYG 1 cut(s) 160
SinI GGWCC 1 cut(s) 1601
SmiMI CAYNNNNRTG 2 cut(s) 257, 1060
SmlI CTYRAG 4 cut(s) 485, 1027, 1467, 1475
SmoI CTYRAG 4 cut(s) 485, 1027, 1467, 1475
SpeI ACTAGT 1 cut(s) 604
SphI GCATGC 1 cut(s) 1055
SseBI AGGCCT 1 cut(s) 659
SspDI GGCGCC 1 cut(s) 47
SspI AATATT 1 cut(s) 1219
SspMI CTAG 7 cut(s) 605, 627, 851, 1304, 1661, 1665, 1738
StuI AGGCCT 1 cut(s) 659
StyD4I CCNGG 3 cut(s) 125, 900, 1259
StyI CCWWGG 2 cut(s) 654, 660
TaaI ACNGT 3 cut(s) 614, 1115, 1605
TaiI ACGT 3 cut(s) 185, 237, 1590
TaqI TCGA 7 cut(s) 90, 96, 195, 240, 810, 846, 1296
TatI WGTACW 2 cut(s) 523, 853
TauI GCSGC 5 cut(s) 53, 206, 209, 407, 410
TfiI GAWTC 4 cut(s) 55, 323, 1146, 1480
Tru1I TTAA 6 cut(s) 738, 954, 975, 1094, 1404, 1590
Tru9I TTAA 6 cut(s) 738, 954, 975, 1094, 1404, 1590
TscAI CASTG 1 cut(s) 1344
TseFI GTSAC 1 cut(s) 874
TseI GCWGC 2 cut(s) 287, 1709
Tsp45I GTSAC 1 cut(s) 874
TspDTI ATGAA 6 cut(s) 388, 633, 1061, 1101, 1139, 1515
TspGWI ACGGA 1 cut(s) 42
TspRI CASTG 1 cut(s) 1344
Tth111I GACNNNGTC 1 cut(s) 804
VpaK11BI GGWCC 1 cut(s) 1601
VspI ATTAAT 1 cut(s) 975
XapI RAATTY 3 cut(s) 1174, 1379, 1612
XceI RCATGY 4 cut(s) 677, 1055, 1246, 1360
XmiI GTMKAC 1 cut(s) 732
XmnI GAANNNNTTC 1 cut(s) 761
XspI CTAG 7 cut(s) 605, 627, 851, 1304, 1661, 1665, 1738
ZrmI AGTACT 1 cut(s) 855
Zsp2I ATGCAT 2 cut(s) 386, 1057
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.