Rw2G007230

RRP12-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000835
Physical Location & Seq
Forward (+)
7011900 .. 7015323
3424 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G007230.1

Sequence Viewer

Length: 1707 bp
ATGGAAACCCTAACCGTCGTAGACGGCGCCAACATCGGCGCCTCAATTCTCATGCGCTTCACCGACTCCAACCGCGAACTCGACCTCGAAATCCGCAAACTCATCGTCGTCATGTCCGGGGTATTCCGAGACCACAAGGCACCTCCGACGCCGGTGGACTACTTGGGGGCCACGTGCACCTCTCTCGACATCGCCACCGCCACCGCCTCCATGCCCCAAGCTTCCGGTCACGTGCTCGACGCCCACCTCACGATTCTGTCCATCGTCATCCCAAAAGTCCCTGCTGCGTTTCTGATCAAGAATCTATGGCCTCTGTTTAATTCTATAGCACGACCTCTCCGGTCTTCGTCTCTGATTGACGAGAGTACTGGCTGCTTAGTAGTGAAATGCATAGCTGAATTCATCATTGCCGTCGCAAAAGTCGTCAACAATTGGTCAGATGTTTCAGAACTGTACAGCTTCTTCCTCAGCTTGGCTACCATTAAAGCCCTCGAGGTGAGAACGCAATTATGTTTGTGTCTTCCTGATGTACTGCAAAGATTTCAAGGAACACCGCTGTTTGACCCTGCAATCAAAAAGATTACCGACTTGTTGAATAAGTATCCTCCACTAGGGAACCATGATGTAAAGGCTAGTGCATCTGTTCTCTCCCAAAAAGAGAAGGCCTGGTTTACTTTGGATGTTGTGAAAGTATCTCTTTGCCTTATGTCAACCGAGGACAGAACTGCTGTGCTCATCTACTTTAAATCTCTCTTGGAACTGAACCAATTCCCTGTCACAGCACGGATAGTTGATTGTTTGTATGGACTTTGTCTCGACCCATCTGCTGATGTTTCTCCTGAACTGTTGCTAGATTTAATACGCTCAATATGTCTTTCTGTCACCCAACATAAGATGATGTACATCCCAGAAACTGCAGCTGGTTTGCTCAGTATTGGAGTGGCGAAAGTCTATTCCTTTAACCAGAAAATCTGCGAAACTAATCTCCCTATTGTGTTTGATGCACTCAAAGTTATATTGGGAGAGCCTAAAATAGACGAACTTCCTGATGCAGTGCATGCATTTAAGTGTCTAATTCATGCTTGTGTTGATGAAAGCTTGATCAAAGAGGGAGTTGACTCTGTGGTGATGAGTGCAAGTATGGATGATGGAAGCAAGTCTGAGGCAACTATAATTGAAAAATTGTGTGCTACTATTCAAAGCCTACTTGGTCATCGCAAAACTAGTATCTGGGCCCTTGCTTTTGAAGTTGTTTCAACAATGTTCGATAAATTAGGGGCATACTCTTCTTATTTGATGAGGGGTACACTCAAGACCTTGGCAGACATGCAGAAATTGCCTGATCAAGAATTTTCTTTCAAGGAAGAGGTTAAGCTTCTTCTAAAAATGCCTGTTGAGAAATGTGGGTTTGATGCTATAATGGCCGTCATGCCTCAAGAACACAAGAAACTGCTTCTAGAGATCAATGAAATGGGTTCTAAATCTGTGGAAGTGATACCTCATGCTTCAGAAGCAACTACAGTCAGGTCCGAAAGTAGTGACAATCAAATGCATGATAAAGCACTTGGACCATGCAAGAATTCAAAACGGAAAATGGATGGTGGAGGTAATGAGTTTTGTGATCGGCATGCCAGGAGTATTGCTAAGAGGGAAATGACAAAAAGGATGTCAGGTGCAGCTCTGATGGCGAAGAAGCTAAAACTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NUC173

Protein Analysis

568

Amino Acids

62.49

Weight (kDa)

6.48

Isoelectric Point (pI)

38.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HEAT_RRP12_N PF25772 7 - 278 1.3e-51 RRP12-like, N-terminal HEAT repeats
RRP12_HEAT PF08161 351 - 481 8.2e-18 Ribosomal RNA-processing protein 12, HEAT repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 491
AccB1I GGYRCC 3 cut(s) 26, 38, 139
AccI GTMKAC 1 cut(s) 21
AccII CGCG 1 cut(s) 75
AciI CCGC 5 cut(s) 73, 94, 198, 204, 554
AcoI YGGCCR 1 cut(s) 1422
AcsI RAATTY 3 cut(s) 398, 1349, 1579
AcuI CTGAAG 1 cut(s) 1491
AcvI CACGTG 2 cut(s) 174, 232
AcyI GRCGYC 4 cut(s) 27, 39, 149, 240
AfaI GTAC 5 cut(s) 367, 455, 531, 902, 1306
AfiI CCNNNNNNNGG 2 cut(s) 472, 611
AgsI TTSAA 8 cut(s) 545, 595, 1178, 1199, 1247, 1257, 1360, 1584
AhlI ACTAGT 1 cut(s) 1223
AjnI CCWGG 2 cut(s) 665, 1631
AluBI AGCT 9 cut(s) 221, 395, 459, 471, 920, 1098, 1375, 1679, 1696
AluI AGCT 9 cut(s) 221, 395, 459, 471, 920, 1098, 1375, 1679, 1696
Alw21I GWGCWC 3 cut(s) 179, 237, 735
Alw26I GTCTC 3 cut(s) 123, 354, 818
Alw44I GTGCAC 1 cut(s) 175
AlwNI CAGNNNCTG 1 cut(s) 914
Ama87I CYCGRG 1 cut(s) 491
AoxI GGCC 5 cut(s) 168, 308, 663, 1233, 1422
ApaI GGGCCC 1 cut(s) 1237
ApaLI GTGCAC 1 cut(s) 175
ApeKI GCWGC 4 cut(s) 284, 372, 917, 1676
ApoI RAATTY 3 cut(s) 398, 1349, 1579
ArsI GACNNNNNNTTYG 4 cut(s) 90, 122, 1652, 1684
Asp700I GAANNNNTTC 1 cut(s) 767
AspLEI GCGC 3 cut(s) 29, 41, 57
AspS9I GGNCC 5 cut(s) 168, 1233, 1234, 1527, 1568
AsuC2I CCSGG 1 cut(s) 118
AsuHPI GGTGA 4 cut(s) 52, 508, 874, 1138
AvaI CYCGRG 1 cut(s) 491
AvaII GGWCC 2 cut(s) 1527, 1568
BaeGI GKGCMC 2 cut(s) 179, 1237
BanI GGYRCC 3 cut(s) 26, 38, 139
BanII GRGCYC 1 cut(s) 1237
BarI GAAGNNNNNNTAC 2 cut(s) 446, 478
BbrPI CACGTG 2 cut(s) 174, 232
BbsI GAAGAC 2 cut(s) 336, 512
Bbv12I GWGCWC 3 cut(s) 179, 237, 735
BbvCI CCTCAGC 1 cut(s) 467
BbvI GCAGC 4 cut(s) 271, 359, 929, 1688
BccI CCATC 5 cut(s) 269, 829, 1142, 1592, 1678
BceAI ACGGC 3 cut(s) 40, 395, 1409
BcgI CGANNNNNNTGC 6 cut(s) 85, 119, 166, 200, 806, 840
BciT130I CCWGG 2 cut(s) 667, 1633
BciVI GTATCC 1 cut(s) 612
BclI TGATCA 3 cut(s) 294, 1101, 1342
BcnI CCSGG 1 cut(s) 118
BcoDI GTCTC 3 cut(s) 123, 354, 818
BcuI ACTAGT 1 cut(s) 1223
BfaI CTAG 6 cut(s) 611, 633, 851, 1224, 1457, 1705
BfmI CTRYAG 3 cut(s) 324, 915, 1518
BfoI RGCGCY 2 cut(s) 30, 42
BfuI GTATCC 1 cut(s) 612
BisI GCNGC 4 cut(s) 285, 373, 918, 1677
BlsI GCNGC 4 cut(s) 286, 374, 919, 1678
BmcAI AGTACT 1 cut(s) 367
Bme1390I CCNGG 3 cut(s) 118, 667, 1633
Bme18I GGWCC 2 cut(s) 1527, 1568
BmeT110I CYCGRG 1 cut(s) 491
BmgT120I GGNCC 5 cut(s) 168, 1233, 1234, 1527, 1568
BmiI GGNNCC 6 cut(s) 28, 40, 141, 169, 617, 1235
BmrFI CCNGG 3 cut(s) 118, 667, 1633
BmsI GCATC 4 cut(s) 647, 991, 1039, 1402
BpiI GAAGAC 2 cut(s) 336, 512
Bpu10I CCTNAGC 1 cut(s) 467
BpuEI CTTGAG 2 cut(s) 1295, 1419
BpuMI CCSGG 1 cut(s) 118
BsaAI YACGTR 2 cut(s) 174, 232
BsaBI GATNNNNATC 1 cut(s) 902
BsaHI GRCGYC 4 cut(s) 27, 39, 149, 240
BsaI GGTCTC 1 cut(s) 123
BsaJI CCNNGG 3 cut(s) 117, 714, 1317
BsaWI WCCGGW 2 cut(s) 224, 339
BsaXI ACNNNNNCTCC 2 cut(s) 321, 351
Bsc4I CCNNNNNNNGG 2 cut(s) 472, 611
Bse118I RCCGGY 1 cut(s) 151
Bse1I ACTGG 1 cut(s) 373
Bse3DI GCAATG 1 cut(s) 405
Bse8I GATNNNNATC 1 cut(s) 902
BseBI CCWGG 2 cut(s) 667, 1633
BseDI CCNNGG 3 cut(s) 117, 714, 1317
BseGI GGATG 6 cut(s) 267, 685, 903, 1150, 1603, 1671
BseJI GATNNNNATC 1 cut(s) 902
BseLI CCNNNNNNNGG 2 cut(s) 472, 611
BseMI GCAATG 1 cut(s) 405
BseMII CTCAG 3 cut(s) 481, 943, 1152
BseNI ACTGG 1 cut(s) 373
BseSI GKGCMC 2 cut(s) 179, 1237
BseXI GCAGC 4 cut(s) 271, 359, 929, 1688
BsgI GTGCAG 1 cut(s) 1695
Bsh1236I CGCG 1 cut(s) 75
BshFI GGCC 5 cut(s) 170, 310, 665, 1235, 1424
BshNI GGYRCC 3 cut(s) 26, 38, 139
BsiHKAI GWGCWC 3 cut(s) 179, 237, 735
BsiHKCI CYCGRG 1 cut(s) 491
BsiSI CCGG 4 cut(s) 117, 152, 225, 340
BslFI GGGAC 1 cut(s) 263
BslI CCNNNNNNNGG 2 cut(s) 472, 611
BsmAI GTCTC 3 cut(s) 123, 354, 818
BsmBI CGTCTC 1 cut(s) 354
BsmFI GGGAC 1 cut(s) 263
BsnI GGCC 5 cut(s) 170, 310, 665, 1235, 1424
Bso31I GGTCTC 1 cut(s) 123
BsoBI CYCGRG 1 cut(s) 491
Bsp120I GGGCCC 1 cut(s) 1233
Bsp1286I GDGCHC 4 cut(s) 179, 237, 735, 1237
Bsp1407I TGTACA 2 cut(s) 453, 900
Bsp143I GATC 5 cut(s) 294, 1101, 1342, 1461, 1621
BspACI CCGC 5 cut(s) 73, 94, 198, 204, 554
BspANI GGCC 5 cut(s) 170, 310, 665, 1235, 1424
BspCNI CTCAG 3 cut(s) 480, 942, 1153
BspFNI CGCG 1 cut(s) 75
BspLI GGNNCC 6 cut(s) 28, 40, 141, 169, 617, 1235
BspMAI CTGCAG 1 cut(s) 919
BspT107I GGYRCC 3 cut(s) 26, 38, 139
BspTNI GGTCTC 1 cut(s) 123
BsrDI GCAATG 1 cut(s) 405
BsrFI RCCGGY 1 cut(s) 151
BsrGI TGTACA 2 cut(s) 453, 900
BsrI ACTGG 1 cut(s) 373
BssAI RCCGGY 1 cut(s) 151
BssECI CCNNGG 3 cut(s) 117, 714, 1317
BssMI GATC 5 cut(s) 294, 1101, 1342, 1461, 1621
BssNI GRCGYC 4 cut(s) 27, 39, 149, 240
BssT1I CCWWGG 1 cut(s) 1317
Bst2UI CCWGG 2 cut(s) 667, 1633
Bst4CI ACNGT 4 cut(s) 16, 453, 846, 1522
Bst6I CTCTTC 2 cut(s) 1291, 1359
BstACI GRCGYC 4 cut(s) 27, 39, 149, 240
BstAPI GCANNNNNTGC 2 cut(s) 1058, 1336
BstAUI TGTACA 2 cut(s) 453, 900
BstBAI YACGTR 2 cut(s) 174, 232
BstC8I GCNNGC 2 cut(s) 1059, 1629
BstDEI CTNAG 5 cut(s) 376, 467, 929, 1161, 1644
BstENI CCTNNNNNAGG 1 cut(s) 609
BstF5I GGATG 6 cut(s) 267, 685, 903, 1150, 1603, 1671
BstFNI CGCG 1 cut(s) 75
BstH2I RGCGCY 2 cut(s) 30, 42
BstHHI GCGC 3 cut(s) 29, 41, 57
BstKTI GATC 5 cut(s) 297, 1104, 1345, 1464, 1624
BstMAI GTCTC 3 cut(s) 123, 354, 818
BstMBI GATC 5 cut(s) 294, 1101, 1342, 1461, 1621
BstMWI GCNNNNNNNGC 5 cut(s) 1058, 1336, 1421, 1511, 1685
BstNI CCWGG 2 cut(s) 667, 1633
BstNSI RCATGY 3 cut(s) 1061, 1330, 1631
BstSCI CCNGG 3 cut(s) 116, 665, 1631
BstSFI CTRYAG 3 cut(s) 324, 915, 1518
BstSLI GKGCMC 2 cut(s) 179, 1237
BstUI CGCG 1 cut(s) 75
BstV1I GCAGC 4 cut(s) 271, 359, 929, 1688
BstV2I GAAGAC 2 cut(s) 336, 512
BsuI GTATCC 1 cut(s) 612
BsuRI GGCC 5 cut(s) 170, 310, 665, 1235, 1424
BtgZI GCGATG 2 cut(s) 175, 1199
BtsCI GGATG 6 cut(s) 267, 685, 903, 1150, 1603, 1671
BtsI GCAGTG 1 cut(s) 1059
BtsIMutI CAGTG 1 cut(s) 1059
Cac8I GCNNGC 2 cut(s) 1059, 1629
CaiI CAGNNNCTG 1 cut(s) 914
CfoI GCGC 3 cut(s) 29, 41, 57
Cfr10I RCCGGY 1 cut(s) 151
Cfr13I GGNCC 5 cut(s) 168, 1233, 1234, 1527, 1568
CseI GACGC 2 cut(s) 157, 248
Csp6I GTAC 5 cut(s) 366, 454, 530, 901, 1305
CviQI GTAC 5 cut(s) 366, 454, 530, 901, 1305
DdeI CTNAG 5 cut(s) 376, 467, 929, 1161, 1644
DinI GGCGCC 2 cut(s) 28, 40
DpnI GATC 5 cut(s) 296, 1103, 1344, 1463, 1623
DpnII GATC 5 cut(s) 294, 1101, 1342, 1461, 1621
DraI TTTAAA 1 cut(s) 745
EaeI YGGCCR 1 cut(s) 1422
Eam1104I CTCTTC 2 cut(s) 1291, 1359
EarI CTCTTC 2 cut(s) 1291, 1359
Eco130I CCWWGG 1 cut(s) 1317
Eco147I AGGCCT 1 cut(s) 665
Eco24I GRGCYC 1 cut(s) 1237
Eco31I GGTCTC 1 cut(s) 123
Eco47I GGWCC 2 cut(s) 1527, 1568
Eco57I CTGAAG 1 cut(s) 1491
Eco72I CACGTG 2 cut(s) 174, 232
Eco88I CYCGRG 1 cut(s) 491
EcoNI CCTNNNNNAGG 1 cut(s) 609
EcoO109I RGGNCCY 1 cut(s) 1234
EcoRI GAATTC 2 cut(s) 398, 1579
EcoRII CCWGG 2 cut(s) 665, 1631
EcoT14I CCWWGG 1 cut(s) 1317
EcoT22I ATGCAT 3 cut(s) 392, 1063, 1554
EcoT38I GRGCYC 1 cut(s) 1237
EgeI GGCGCC 2 cut(s) 28, 40
EheI GGCGCC 2 cut(s) 28, 40
ErhI CCWWGG 1 cut(s) 1317
Esp3I CGTCTC 1 cut(s) 354
FalI AAGNNNNNCTT 2 cut(s) 681, 713
FaqI GGGAC 1 cut(s) 263
FbaI TGATCA 3 cut(s) 294, 1101, 1342
FblI GTMKAC 1 cut(s) 21
Fnu4HI GCNGC 4 cut(s) 285, 373, 918, 1677
FokI GGATG 6 cut(s) 254, 692, 890, 1157, 1610, 1678
FriOI GRGCYC 1 cut(s) 1237
Fsp4HI GCNGC 4 cut(s) 285, 373, 918, 1677
FspBI CTAG 6 cut(s) 611, 633, 851, 1224, 1457, 1705
GlaI GCGC 3 cut(s) 28, 40, 56
GluI GCNGC 4 cut(s) 285, 373, 918, 1677
HaeII RGCGCY 2 cut(s) 30, 42
HaeIII GGCC 5 cut(s) 170, 310, 665, 1235, 1424
HapII CCGG 4 cut(s) 117, 152, 225, 340
HgaI GACGC 2 cut(s) 157, 248
HhaI GCGC 3 cut(s) 29, 41, 57
Hin1I GRCGYC 4 cut(s) 27, 39, 149, 240
Hin6I GCGC 3 cut(s) 27, 39, 55
HinP1I GCGC 3 cut(s) 27, 39, 55
HincII GTYRAC 3 cut(s) 427, 711, 1117
HindII GTYRAC 3 cut(s) 427, 711, 1117
HindIII AAGCTT 3 cut(s) 219, 1096, 1373
HinfI GANTC 4 cut(s) 65, 253, 301, 1118
HpaII CCGG 4 cut(s) 117, 152, 225, 340
HphI GGTGA 4 cut(s) 52, 508, 874, 1138
Hpy166II GTNNAC 8 cut(s) 22, 157, 177, 427, 672, 711, 1117, 1307
Hpy8I GTNNAC 8 cut(s) 22, 157, 177, 427, 672, 711, 1117, 1307
Hpy99I CGWCG 5 cut(s) 20, 110, 151, 242, 416
HpyAV CCTTC 1 cut(s) 655
HpyCH4III ACNGT 4 cut(s) 16, 453, 846, 1522
HpyCH4IV ACGT 2 cut(s) 173, 231
HpyF10VI GCNNNNNNNGC 5 cut(s) 1058, 1336, 1421, 1511, 1685
HpyF3I CTNAG 5 cut(s) 376, 467, 929, 1161, 1644
HpySE526I ACGT 2 cut(s) 173, 231
Hsp92I GRCGYC 4 cut(s) 27, 39, 149, 240
HspAI GCGC 3 cut(s) 27, 39, 55
KasI GGCGCC 2 cut(s) 26, 38
Ksp22I TGATCA 3 cut(s) 294, 1101, 1342
Kzo9I GATC 5 cut(s) 294, 1101, 1342, 1461, 1621
Lsp1109I GCAGC 4 cut(s) 271, 359, 929, 1688
LweI GCATC 4 cut(s) 647, 991, 1039, 1402
MaeI CTAG 6 cut(s) 611, 633, 851, 1224, 1457, 1705
MaeII ACGT 2 cut(s) 173, 231
MaeIII GTNAC 4 cut(s) 227, 775, 880, 1538
MalI GATC 5 cut(s) 296, 1103, 1344, 1463, 1623
MboI GATC 5 cut(s) 294, 1101, 1342, 1461, 1621
MboII GAAGA 7 cut(s) 336, 454, 512, 1278, 1370, 1376, 1702
MfeI CAATTG 1 cut(s) 430
MhlI GDGCHC 4 cut(s) 179, 237, 735, 1237
Mly113I GGCGCC 2 cut(s) 27, 39
MlyI GAGTC 2 cut(s) 59, 1112
MmeI TCCRAC 2 cut(s) 93, 170
Mph1103I ATGCAT 3 cut(s) 392, 1063, 1554
MroXI GAANNNNTTC 1 cut(s) 767
MseI TTAA 7 cut(s) 318, 483, 744, 857, 960, 1065, 1371
MslI CAYNNNNRTG 2 cut(s) 1066, 1083
MspA1I CMGCKG 2 cut(s) 556, 920
MspI CCGG 4 cut(s) 117, 152, 225, 340
MspR9I CCNGG 3 cut(s) 118, 667, 1633
MunI CAATTG 1 cut(s) 430
MvaI CCWGG 2 cut(s) 667, 1633
MvnI CGCG 1 cut(s) 75
MwoI GCNNNNNNNGC 5 cut(s) 1058, 1336, 1421, 1511, 1685
NarI GGCGCC 2 cut(s) 27, 39
NciI CCSGG 1 cut(s) 118
NdeII GATC 5 cut(s) 294, 1101, 1342, 1461, 1621
NlaIV GGNNCC 6 cut(s) 28, 40, 141, 169, 617, 1235
NmuCI GTSAC 4 cut(s) 227, 775, 880, 1538
NsiI ATGCAT 3 cut(s) 392, 1063, 1554
NspI RCATGY 3 cut(s) 1061, 1330, 1631
PaeI GCATGC 2 cut(s) 1061, 1631
PaeR7I CTCGAG 1 cut(s) 491
PceI AGGCCT 1 cut(s) 665
PcsI WCGNNNNNNNCGW 1 cut(s) 420
PdmI GAANNNNTTC 1 cut(s) 767
PfeI GAWTC 2 cut(s) 253, 301
PflFI GACNNNGTC 1 cut(s) 810
PkrI GCNGC 4 cut(s) 286, 374, 919, 1678
PleI GAGTC 2 cut(s) 59, 1112
PluTI GGCGCC 2 cut(s) 30, 42
PmaCI CACGTG 2 cut(s) 174, 232
PmlI CACGTG 2 cut(s) 174, 232
PpsI GAGTC 2 cut(s) 59, 1112
Ppu21I YACGTR 2 cut(s) 174, 232
Psp6I CCWGG 2 cut(s) 665, 1631
PspCI CACGTG 2 cut(s) 174, 232
PspGI CCWGG 2 cut(s) 665, 1631
PspN4I GGNNCC 6 cut(s) 28, 40, 141, 169, 617, 1235
PspOMI GGGCCC 1 cut(s) 1233
PspPI GGNCC 5 cut(s) 168, 1233, 1234, 1527, 1568
PspXI VCTCGAGB 1 cut(s) 491
PstI CTGCAG 1 cut(s) 919
PstNI CAGNNNCTG 1 cut(s) 914
PsyI GACNNNGTC 1 cut(s) 810
PvuII CAGCTG 1 cut(s) 920
RsaI GTAC 5 cut(s) 367, 455, 531, 902, 1306
RsaNI GTAC 5 cut(s) 366, 454, 530, 901, 1305
RseI CAYNNNNRTG 2 cut(s) 1066, 1083
SaqAI TTAA 7 cut(s) 318, 483, 744, 857, 960, 1065, 1371
SatI GCNGC 4 cut(s) 285, 373, 918, 1677
Sau3AI GATC 5 cut(s) 294, 1101, 1342, 1461, 1621
Sau96I GGNCC 5 cut(s) 168, 1233, 1234, 1527, 1568
ScaI AGTACT 1 cut(s) 367
SchI GAGTC 2 cut(s) 59, 1112
ScrFI CCNGG 3 cut(s) 118, 667, 1633
SduI GDGCHC 4 cut(s) 179, 237, 735, 1237
SfaNI GCATC 4 cut(s) 647, 991, 1039, 1402
SfcI CTRYAG 3 cut(s) 324, 915, 1518
SfoI GGCGCC 2 cut(s) 28, 40
Sfr274I CTCGAG 1 cut(s) 491
SgrAI CRCCGGYG 1 cut(s) 151
SinI GGWCC 2 cut(s) 1527, 1568
SlaI CTCGAG 1 cut(s) 491
SmiMI CAYNNNNRTG 2 cut(s) 1066, 1083
SmlI CTYRAG 3 cut(s) 491, 1310, 1434
SmoI CTYRAG 3 cut(s) 491, 1310, 1434
SpeI ACTAGT 1 cut(s) 1223
SphI GCATGC 2 cut(s) 1061, 1631
SseBI AGGCCT 1 cut(s) 665
SsiI CCGC 5 cut(s) 73, 94, 198, 204, 554
SspDI GGCGCC 2 cut(s) 26, 38
SspMI CTAG 6 cut(s) 611, 633, 851, 1224, 1457, 1705
StuI AGGCCT 1 cut(s) 665
StyD4I CCNGG 3 cut(s) 116, 665, 1631
StyI CCWWGG 1 cut(s) 1317
TaaI ACNGT 4 cut(s) 16, 453, 846, 1522
TaiI ACGT 2 cut(s) 176, 234
TaqI TCGA 7 cut(s) 81, 87, 186, 237, 492, 816, 1266
TatI WGTACW 4 cut(s) 365, 453, 529, 900
TfiI GAWTC 2 cut(s) 253, 301
Tru1I TTAA 7 cut(s) 318, 483, 744, 857, 960, 1065, 1371
Tru9I TTAA 7 cut(s) 318, 483, 744, 857, 960, 1065, 1371
TscAI CASTG 1 cut(s) 1059
TseFI GTSAC 4 cut(s) 227, 775, 880, 1538
TseI GCWGC 4 cut(s) 284, 372, 917, 1676
Tsp45I GTSAC 4 cut(s) 227, 775, 880, 1538
TspDTI ATGAA 4 cut(s) 391, 1067, 1107, 1482
TspGWI ACGGA 2 cut(s) 799, 1603
TspRI CASTG 1 cut(s) 1059
Tth111I GACNNNGTC 1 cut(s) 810
VneI GTGCAC 1 cut(s) 175
VpaK11BI GGWCC 2 cut(s) 1527, 1568
XagI CCTNNNNNAGG 1 cut(s) 609
XapI RAATTY 3 cut(s) 398, 1349, 1579
XbaI TCTAGA 1 cut(s) 1456
XceI RCATGY 3 cut(s) 1061, 1330, 1631
XhoI CTCGAG 1 cut(s) 491
XmiI GTMKAC 1 cut(s) 21
XmnI GAANNNNTTC 1 cut(s) 767
XspI CTAG 6 cut(s) 611, 633, 851, 1224, 1457, 1705
ZrmI AGTACT 1 cut(s) 367
Zsp2I ATGCAT 3 cut(s) 392, 1063, 1554
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.