Rh2AG095900

RRP12-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000835
Physical Location & Seq
Forward (+)
8094149 .. 8097211
3063 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG095900.1

Sequence Viewer

Length: 1701 bp
ATGGAAACCCTAACCGTCGTAGACGCCGCCAACATCGGCGCCTCAATTCTCATGCGCTTCACCGACTCCAACCGCGAACTCGACCTCGAAGTCCGCAAACTCATCGTCGTCATGTCTGGGGTATTCCGAGACCACAAGGCACCTCCGACGCCGGTGGACTACTTGGGGGCCACGTGCACCTCTCTCGACATCGCCACCGCCTCCATGCCCCAAGCTTCCGGTCACGTGCTCGACGCCCACCTCACGATTCTGTCCATCGTCATCCCAAAAGTCCCTGCTGCGTTTCTGATCAAGAATCTATGGCCTCTGTTTAATTCTATAGCACGACCTCTCCGGTCTTCGTCTCTGATTGACGAGAGTACCGGCTGCTTAGTAGTGAAATGCATAGCTGAATTCATCATTGCCGTCGCAAAAGTCGTCAACAATTGGTCAGATGTTTCAGAACTGTACAGCTTCTTCCTCAGCTTGGCTACCATTAAAGCCCTCGAGGTGAGAACGCAATTATGTTTGTGTCTTCCTGACGTACTGCAAAGATTTCAAGGAACACCGCTGTTTGACCCTGCAATCAAAAAGATTACCGACTTGTTGAATAAGTATCCTCCACTAGGGAACCATGATGTAAAGGCTAGTGCATCTGTTCTCTCCCAAAAAGAGAAGGCCTGGTTTACTTTGGATGTTGTGAAAGTATCTCTTTGCCTTATGTCAACCGAGGACAGAACTGCTGTGCTCATCTACTTTAAATCTCTCTTGGAACTGAACCAATTCCCTGTTACAGCACGGATAGTTGATTGTTTGTATGGACTTTGTCTCGACCCATCTGCTGATGTTTCTCCTGAACTGTTGCTAGATTTAATACGCTCAATATGTCTTTCTGTCACCCAACATAAGATGATGTACATCCCAGAAACTGCAGCTGGTTTGCTCAGTATTGGAGTGGCGAGAGTCTATTCCTTTAACCAGAAAATCTGCGAAACTAATCTCCCTATTGTGTTTGATGCACTCAAAGTTATATTGGGAGAGCCTAAAATAGACGAACTTCCTGATGCAGTGCATGCATTTAAGTGTCTAATTCATGCTTGTGTTGATGAAAGCTTGATCAAAGAGGGAGTTGACTGTGTGGTGATGAGTGCAAGTATGGATGATGGAAGCAAGTCTGAGGCAACTATAATTGAAAAATTGTGTGCTACTATTCAAAGCCTACTTGGTCATCGCAAAACTACTATCTGGGCCCTTGCTTTTGAAGTTGTTTCAACAATGTTCGATAAATTAGGGGCATACTCTTCTTATTTGATGAGGGGTACACTCAAGACCTTGGCAGACATGCAGAAATTGCCTGATCAAGAATTTTCTTTCAAGGAAGAGGTTAAGCTTCTTCTAAAAATGCTTGTTGAGAAATGTGGGTTTGATGCTATAATGGCCGTCATGCCTCAAGAACACAAGAAACTGCTTCTAGAGATCAATGAAATGGGTTCTAAATCTGTGGAAGTGATATCTCATGCTTCAGAAGCAACTACAGTCAGGTCCGAAAGTAGTGACAATCAAATGCATGATAAAGCACTTGGACCATGCAAGAATTCAAAACGGAAAATGGATGGTGGAGGTAATGAGTTTTGTGATCGGCATGCCAGGAGTATTGCTAAGAGGGAAATGACAAAAAGGATGTCAGGTGCAGCTCTGATGGCGAAGAAGCTAAAACTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NUC173

Protein Analysis

566

Amino Acids

62.39

Weight (kDa)

6.48

Isoelectric Point (pI)

37.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HEAT_RRP12_N PF25772 7 - 276 8.8e-52 RRP12-like, N-terminal HEAT repeats
RRP12_HEAT PF08161 349 - 479 4.1e-18 Ribosomal RNA-processing protein 12, HEAT repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 89
AbsI CCTCGAGG 1 cut(s) 485
AccB1I GGYRCC 2 cut(s) 38, 139
AccI GTMKAC 1 cut(s) 21
AccII CGCG 1 cut(s) 75
AciI CCGC 5 cut(s) 27, 73, 94, 198, 548
AcoI YGGCCR 1 cut(s) 1416
AcsI RAATTY 3 cut(s) 392, 1343, 1573
AcuI CTGAAG 1 cut(s) 1485
AcvI CACGTG 2 cut(s) 174, 226
AcyI GRCGYC 4 cut(s) 24, 39, 149, 234
AfaI GTAC 5 cut(s) 361, 449, 525, 896, 1300
AfiI CCNNNNNNNGG 2 cut(s) 466, 605
AgsI TTSAA 8 cut(s) 539, 589, 1172, 1193, 1241, 1251, 1354, 1578
AjnI CCWGG 2 cut(s) 659, 1625
AluBI AGCT 9 cut(s) 215, 389, 453, 465, 914, 1092, 1369, 1673, 1690
AluI AGCT 9 cut(s) 215, 389, 453, 465, 914, 1092, 1369, 1673, 1690
Alw21I GWGCWC 3 cut(s) 179, 231, 729
Alw26I GTCTC 3 cut(s) 123, 348, 812
Alw44I GTGCAC 1 cut(s) 175
AlwNI CAGNNNCTG 1 cut(s) 908
Ama87I CYCGRG 1 cut(s) 485
AoxI GGCC 5 cut(s) 168, 302, 657, 1227, 1416
ApaI GGGCCC 1 cut(s) 1231
ApaLI GTGCAC 1 cut(s) 175
ApeKI GCWGC 4 cut(s) 278, 366, 911, 1670
ApoI RAATTY 3 cut(s) 392, 1343, 1573
ArsI GACNNNNNNTTYG 4 cut(s) 90, 122, 1646, 1678
Asp700I GAANNNNTTC 1 cut(s) 761
AspLEI GCGC 2 cut(s) 41, 57
AspS9I GGNCC 5 cut(s) 168, 1227, 1228, 1521, 1562
AsuHPI GGTGA 4 cut(s) 52, 502, 868, 1132
AvaI CYCGRG 1 cut(s) 485
AvaII GGWCC 2 cut(s) 1521, 1562
BaeGI GKGCMC 2 cut(s) 179, 1231
BaeI ACNNNNGTAYC 2 cut(s) 343, 376
BanI GGYRCC 2 cut(s) 38, 139
BanII GRGCYC 1 cut(s) 1231
BarI GAAGNNNNNNTAC 2 cut(s) 440, 472
BbrPI CACGTG 2 cut(s) 174, 226
BbsI GAAGAC 2 cut(s) 330, 506
Bbv12I GWGCWC 3 cut(s) 179, 231, 729
BbvCI CCTCAGC 1 cut(s) 461
BbvI GCAGC 4 cut(s) 265, 353, 923, 1682
BccI CCATC 5 cut(s) 263, 823, 1136, 1586, 1672
BceAI ACGGC 2 cut(s) 389, 1403
BcgI CGANNNNNNTGC 6 cut(s) 85, 119, 166, 200, 800, 834
BciT130I CCWGG 2 cut(s) 661, 1627
BciVI GTATCC 1 cut(s) 606
BclI TGATCA 3 cut(s) 288, 1095, 1336
BcoDI GTCTC 3 cut(s) 123, 348, 812
BfaI CTAG 5 cut(s) 605, 627, 845, 1451, 1699
BfmI CTRYAG 3 cut(s) 318, 909, 1512
BfoI RGCGCY 1 cut(s) 42
BfuI GTATCC 1 cut(s) 606
BisI GCNGC 5 cut(s) 27, 279, 367, 912, 1671
BlsI GCNGC 5 cut(s) 28, 280, 368, 913, 1672
Bme1390I CCNGG 2 cut(s) 661, 1627
Bme18I GGWCC 2 cut(s) 1521, 1562
BmeT110I CYCGRG 1 cut(s) 485
BmgT120I GGNCC 5 cut(s) 168, 1227, 1228, 1521, 1562
BmiI GGNNCC 5 cut(s) 40, 141, 169, 611, 1229
BmrFI CCNGG 2 cut(s) 661, 1627
BmsI GCATC 4 cut(s) 641, 985, 1033, 1396
BpiI GAAGAC 2 cut(s) 330, 506
Bpu10I CCTNAGC 1 cut(s) 461
BpuEI CTTGAG 2 cut(s) 1289, 1413
BsaAI YACGTR 2 cut(s) 174, 226
BsaBI GATNNNNATC 1 cut(s) 896
BsaHI GRCGYC 4 cut(s) 24, 39, 149, 234
BsaI GGTCTC 1 cut(s) 123
BsaJI CCNNGG 2 cut(s) 708, 1311
BsaWI WCCGGW 2 cut(s) 218, 333
BsaXI ACNNNNNCTCC 2 cut(s) 315, 345
Bsc4I CCNNNNNNNGG 2 cut(s) 466, 605
Bse118I RCCGGY 2 cut(s) 151, 362
Bse3DI GCAATG 1 cut(s) 399
Bse8I GATNNNNATC 1 cut(s) 896
BseBI CCWGG 2 cut(s) 661, 1627
BseDI CCNNGG 2 cut(s) 708, 1311
BseGI GGATG 6 cut(s) 261, 679, 897, 1144, 1597, 1665
BseJI GATNNNNATC 1 cut(s) 896
BseLI CCNNNNNNNGG 2 cut(s) 466, 605
BseMI GCAATG 1 cut(s) 399
BseMII CTCAG 3 cut(s) 475, 937, 1146
BseSI GKGCMC 2 cut(s) 179, 1231
BseXI GCAGC 4 cut(s) 265, 353, 923, 1682
BsgI GTGCAG 1 cut(s) 1689
Bsh1236I CGCG 1 cut(s) 75
BshFI GGCC 5 cut(s) 170, 304, 659, 1229, 1418
BshNI GGYRCC 2 cut(s) 38, 139
BsiHKAI GWGCWC 3 cut(s) 179, 231, 729
BsiHKCI CYCGRG 1 cut(s) 485
BsiSI CCGG 4 cut(s) 152, 219, 334, 363
BslFI GGGAC 1 cut(s) 257
BslI CCNNNNNNNGG 2 cut(s) 466, 605
BsmAI GTCTC 3 cut(s) 123, 348, 812
BsmBI CGTCTC 1 cut(s) 348
BsmFI GGGAC 1 cut(s) 257
BsnI GGCC 5 cut(s) 170, 304, 659, 1229, 1418
Bso31I GGTCTC 1 cut(s) 123
BsoBI CYCGRG 1 cut(s) 485
Bsp120I GGGCCC 1 cut(s) 1227
Bsp1286I GDGCHC 4 cut(s) 179, 231, 729, 1231
Bsp1407I TGTACA 2 cut(s) 447, 894
Bsp143I GATC 5 cut(s) 288, 1095, 1336, 1455, 1615
BspACI CCGC 5 cut(s) 27, 73, 94, 198, 548
BspANI GGCC 5 cut(s) 170, 304, 659, 1229, 1418
BspCNI CTCAG 3 cut(s) 474, 936, 1147
BspFNI CGCG 1 cut(s) 75
BspLI GGNNCC 5 cut(s) 40, 141, 169, 611, 1229
BspMAI CTGCAG 1 cut(s) 913
BspT107I GGYRCC 2 cut(s) 38, 139
BspTNI GGTCTC 1 cut(s) 123
BsrDI GCAATG 1 cut(s) 399
BsrFI RCCGGY 2 cut(s) 151, 362
BsrGI TGTACA 2 cut(s) 447, 894
BssAI RCCGGY 2 cut(s) 151, 362
BssECI CCNNGG 2 cut(s) 708, 1311
BssMI GATC 5 cut(s) 288, 1095, 1336, 1455, 1615
BssNI GRCGYC 4 cut(s) 24, 39, 149, 234
BssT1I CCWWGG 1 cut(s) 1311
Bst2UI CCWGG 2 cut(s) 661, 1627
Bst4CI ACNGT 5 cut(s) 16, 447, 840, 1115, 1516
Bst6I CTCTTC 2 cut(s) 1285, 1353
BstACI GRCGYC 4 cut(s) 24, 39, 149, 234
BstAPI GCANNNNNTGC 2 cut(s) 1052, 1330
BstAUI TGTACA 2 cut(s) 447, 894
BstBAI YACGTR 2 cut(s) 174, 226
BstC8I GCNNGC 2 cut(s) 1053, 1623
BstDEI CTNAG 5 cut(s) 370, 461, 923, 1155, 1638
BstENI CCTNNNNNAGG 1 cut(s) 603
BstF5I GGATG 6 cut(s) 261, 679, 897, 1144, 1597, 1665
BstFNI CGCG 1 cut(s) 75
BstH2I RGCGCY 1 cut(s) 42
BstHHI GCGC 2 cut(s) 41, 57
BstKTI GATC 5 cut(s) 291, 1098, 1339, 1458, 1618
BstMAI GTCTC 3 cut(s) 123, 348, 812
BstMBI GATC 5 cut(s) 288, 1095, 1336, 1455, 1615
BstMWI GCNNNNNNNGC 5 cut(s) 1052, 1330, 1415, 1505, 1679
BstNI CCWGG 2 cut(s) 661, 1627
BstNSI RCATGY 3 cut(s) 1055, 1324, 1625
BstSCI CCNGG 2 cut(s) 659, 1625
BstSFI CTRYAG 3 cut(s) 318, 909, 1512
BstSLI GKGCMC 2 cut(s) 179, 1231
BstUI CGCG 1 cut(s) 75
BstV1I GCAGC 4 cut(s) 265, 353, 923, 1682
BstV2I GAAGAC 2 cut(s) 330, 506
BsuI GTATCC 1 cut(s) 606
BsuRI GGCC 5 cut(s) 170, 304, 659, 1229, 1418
BtgZI GCGATG 2 cut(s) 175, 1193
BtsCI GGATG 6 cut(s) 261, 679, 897, 1144, 1597, 1665
BtsI GCAGTG 1 cut(s) 1053
BtsIMutI CAGTG 1 cut(s) 1053
Cac8I GCNNGC 2 cut(s) 1053, 1623
CaiI CAGNNNCTG 1 cut(s) 908
CfoI GCGC 2 cut(s) 41, 57
Cfr10I RCCGGY 2 cut(s) 151, 362
Cfr13I GGNCC 5 cut(s) 168, 1227, 1228, 1521, 1562
CseI GACGC 3 cut(s) 32, 157, 242
Csp6I GTAC 5 cut(s) 360, 448, 524, 895, 1299
CviQI GTAC 5 cut(s) 360, 448, 524, 895, 1299
DdeI CTNAG 5 cut(s) 370, 461, 923, 1155, 1638
DinI GGCGCC 1 cut(s) 40
DpnI GATC 5 cut(s) 290, 1097, 1338, 1457, 1617
DpnII GATC 5 cut(s) 288, 1095, 1336, 1455, 1615
DraI TTTAAA 1 cut(s) 739
DrdI GACNNNNNNGTC 1 cut(s) 89
DseDI GACNNNNNNGTC 1 cut(s) 89
EaeI YGGCCR 1 cut(s) 1416
Eam1104I CTCTTC 2 cut(s) 1285, 1353
EarI CTCTTC 2 cut(s) 1285, 1353
Eco130I CCWWGG 1 cut(s) 1311
Eco147I AGGCCT 1 cut(s) 659
Eco24I GRGCYC 1 cut(s) 1231
Eco31I GGTCTC 1 cut(s) 123
Eco32I GATATC 1 cut(s) 1491
Eco47I GGWCC 2 cut(s) 1521, 1562
Eco57I CTGAAG 1 cut(s) 1485
Eco72I CACGTG 2 cut(s) 174, 226
Eco88I CYCGRG 1 cut(s) 485
EcoNI CCTNNNNNAGG 1 cut(s) 603
EcoO109I RGGNCCY 1 cut(s) 1228
EcoRI GAATTC 2 cut(s) 392, 1573
EcoRII CCWGG 2 cut(s) 659, 1625
EcoRV GATATC 1 cut(s) 1491
EcoT14I CCWWGG 1 cut(s) 1311
EcoT22I ATGCAT 3 cut(s) 386, 1057, 1548
EcoT38I GRGCYC 1 cut(s) 1231
EgeI GGCGCC 1 cut(s) 40
EheI GGCGCC 1 cut(s) 40
ErhI CCWWGG 1 cut(s) 1311
Esp3I CGTCTC 1 cut(s) 348
FalI AAGNNNNNCTT 2 cut(s) 675, 707
FaqI GGGAC 1 cut(s) 257
FbaI TGATCA 3 cut(s) 288, 1095, 1336
FblI GTMKAC 1 cut(s) 21
Fnu4HI GCNGC 5 cut(s) 27, 279, 367, 912, 1671
FokI GGATG 6 cut(s) 248, 686, 884, 1151, 1604, 1672
FriOI GRGCYC 1 cut(s) 1231
Fsp4HI GCNGC 5 cut(s) 27, 279, 367, 912, 1671
FspBI CTAG 5 cut(s) 605, 627, 845, 1451, 1699
GlaI GCGC 2 cut(s) 40, 56
GluI GCNGC 5 cut(s) 27, 279, 367, 912, 1671
HaeII RGCGCY 1 cut(s) 42
HaeIII GGCC 5 cut(s) 170, 304, 659, 1229, 1418
HapII CCGG 4 cut(s) 152, 219, 334, 363
HgaI GACGC 3 cut(s) 32, 157, 242
HhaI GCGC 2 cut(s) 41, 57
Hin1I GRCGYC 4 cut(s) 24, 39, 149, 234
Hin6I GCGC 2 cut(s) 39, 55
HinP1I GCGC 2 cut(s) 39, 55
HincII GTYRAC 3 cut(s) 421, 705, 1111
HindII GTYRAC 3 cut(s) 421, 705, 1111
HindIII AAGCTT 3 cut(s) 213, 1090, 1367
HinfI GANTC 4 cut(s) 65, 247, 295, 942
HpaII CCGG 4 cut(s) 152, 219, 334, 363
HphI GGTGA 4 cut(s) 52, 502, 868, 1132
Hpy166II GTNNAC 8 cut(s) 22, 157, 177, 421, 666, 705, 1111, 1301
Hpy8I GTNNAC 8 cut(s) 22, 157, 177, 421, 666, 705, 1111, 1301
Hpy99I CGWCG 5 cut(s) 20, 110, 151, 236, 410
HpyAV CCTTC 1 cut(s) 649
HpyCH4III ACNGT 5 cut(s) 16, 447, 840, 1115, 1516
HpyCH4IV ACGT 3 cut(s) 173, 225, 522
HpyF10VI GCNNNNNNNGC 5 cut(s) 1052, 1330, 1415, 1505, 1679
HpyF3I CTNAG 5 cut(s) 370, 461, 923, 1155, 1638
HpySE526I ACGT 3 cut(s) 173, 225, 522
Hsp92I GRCGYC 4 cut(s) 24, 39, 149, 234
HspAI GCGC 2 cut(s) 39, 55
KasI GGCGCC 1 cut(s) 38
Ksp22I TGATCA 3 cut(s) 288, 1095, 1336
Kzo9I GATC 5 cut(s) 288, 1095, 1336, 1455, 1615
Lsp1109I GCAGC 4 cut(s) 265, 353, 923, 1682
LweI GCATC 4 cut(s) 641, 985, 1033, 1396
MaeI CTAG 5 cut(s) 605, 627, 845, 1451, 1699
MaeII ACGT 3 cut(s) 173, 225, 522
MaeIII GTNAC 4 cut(s) 221, 769, 874, 1532
MalI GATC 5 cut(s) 290, 1097, 1338, 1457, 1617
MboI GATC 5 cut(s) 288, 1095, 1336, 1455, 1615
MboII GAAGA 7 cut(s) 330, 448, 506, 1272, 1364, 1370, 1696
MfeI CAATTG 1 cut(s) 424
MhlI GDGCHC 4 cut(s) 179, 231, 729, 1231
Mly113I GGCGCC 1 cut(s) 39
MlyI GAGTC 2 cut(s) 59, 951
MmeI TCCRAC 2 cut(s) 93, 170
Mph1103I ATGCAT 3 cut(s) 386, 1057, 1548
MroXI GAANNNNTTC 1 cut(s) 761
MseI TTAA 7 cut(s) 312, 477, 738, 851, 954, 1059, 1365
MslI CAYNNNNRTG 2 cut(s) 1060, 1077
MspA1I CMGCKG 2 cut(s) 550, 914
MspI CCGG 4 cut(s) 152, 219, 334, 363
MspR9I CCNGG 2 cut(s) 661, 1627
MunI CAATTG 1 cut(s) 424
MvaI CCWGG 2 cut(s) 661, 1627
MvnI CGCG 1 cut(s) 75
MwoI GCNNNNNNNGC 5 cut(s) 1052, 1330, 1415, 1505, 1679
NarI GGCGCC 1 cut(s) 39
NdeII GATC 5 cut(s) 288, 1095, 1336, 1455, 1615
NlaIV GGNNCC 5 cut(s) 40, 141, 169, 611, 1229
NmuCI GTSAC 3 cut(s) 221, 874, 1532
NsiI ATGCAT 3 cut(s) 386, 1057, 1548
NspI RCATGY 3 cut(s) 1055, 1324, 1625
PaeI GCATGC 2 cut(s) 1055, 1625
PaeR7I CTCGAG 1 cut(s) 485
PceI AGGCCT 1 cut(s) 659
PcsI WCGNNNNNNNCGW 1 cut(s) 414
PdmI GAANNNNTTC 1 cut(s) 761
PfeI GAWTC 2 cut(s) 247, 295
PflFI GACNNNGTC 1 cut(s) 804
PkrI GCNGC 5 cut(s) 28, 280, 368, 913, 1672
PleI GAGTC 2 cut(s) 59, 950
PluTI GGCGCC 1 cut(s) 42
PmaCI CACGTG 2 cut(s) 174, 226
PmlI CACGTG 2 cut(s) 174, 226
PpsI GAGTC 2 cut(s) 59, 950
Ppu21I YACGTR 2 cut(s) 174, 226
Psp6I CCWGG 2 cut(s) 659, 1625
PspCI CACGTG 2 cut(s) 174, 226
PspGI CCWGG 2 cut(s) 659, 1625
PspN4I GGNNCC 5 cut(s) 40, 141, 169, 611, 1229
PspOMI GGGCCC 1 cut(s) 1227
PspPI GGNCC 5 cut(s) 168, 1227, 1228, 1521, 1562
PspXI VCTCGAGB 1 cut(s) 485
PstI CTGCAG 1 cut(s) 913
PstNI CAGNNNCTG 1 cut(s) 908
PsyI GACNNNGTC 1 cut(s) 804
PvuII CAGCTG 1 cut(s) 914
RsaI GTAC 5 cut(s) 361, 449, 525, 896, 1300
RsaNI GTAC 5 cut(s) 360, 448, 524, 895, 1299
RseI CAYNNNNRTG 2 cut(s) 1060, 1077
SaqAI TTAA 7 cut(s) 312, 477, 738, 851, 954, 1059, 1365
SatI GCNGC 5 cut(s) 27, 279, 367, 912, 1671
Sau3AI GATC 5 cut(s) 288, 1095, 1336, 1455, 1615
Sau96I GGNCC 5 cut(s) 168, 1227, 1228, 1521, 1562
SchI GAGTC 2 cut(s) 59, 951
ScrFI CCNGG 2 cut(s) 661, 1627
SduI GDGCHC 4 cut(s) 179, 231, 729, 1231
SfaNI GCATC 4 cut(s) 641, 985, 1033, 1396
SfcI CTRYAG 3 cut(s) 318, 909, 1512
SfoI GGCGCC 1 cut(s) 40
Sfr274I CTCGAG 1 cut(s) 485
SgrAI CRCCGGYG 1 cut(s) 151
SinI GGWCC 2 cut(s) 1521, 1562
SlaI CTCGAG 1 cut(s) 485
SmiMI CAYNNNNRTG 2 cut(s) 1060, 1077
SmlI CTYRAG 3 cut(s) 485, 1304, 1428
SmoI CTYRAG 3 cut(s) 485, 1304, 1428
SphI GCATGC 2 cut(s) 1055, 1625
SseBI AGGCCT 1 cut(s) 659
SsiI CCGC 5 cut(s) 27, 73, 94, 198, 548
SspDI GGCGCC 1 cut(s) 38
SspMI CTAG 5 cut(s) 605, 627, 845, 1451, 1699
StuI AGGCCT 1 cut(s) 659
StyD4I CCNGG 2 cut(s) 659, 1625
StyI CCWWGG 1 cut(s) 1311
TaaI ACNGT 5 cut(s) 16, 447, 840, 1115, 1516
TaiI ACGT 3 cut(s) 176, 228, 525
TaqI TCGA 7 cut(s) 81, 87, 186, 231, 486, 810, 1260
TatI WGTACW 2 cut(s) 447, 894
TauI GCSGC 1 cut(s) 29
TfiI GAWTC 2 cut(s) 247, 295
Tru1I TTAA 7 cut(s) 312, 477, 738, 851, 954, 1059, 1365
Tru9I TTAA 7 cut(s) 312, 477, 738, 851, 954, 1059, 1365
TscAI CASTG 1 cut(s) 1053
TseFI GTSAC 3 cut(s) 221, 874, 1532
TseI GCWGC 4 cut(s) 278, 366, 911, 1670
Tsp45I GTSAC 3 cut(s) 221, 874, 1532
TspDTI ATGAA 4 cut(s) 385, 1061, 1101, 1476
TspGWI ACGGA 2 cut(s) 793, 1597
TspRI CASTG 1 cut(s) 1053
Tth111I GACNNNGTC 1 cut(s) 804
VneI GTGCAC 1 cut(s) 175
VpaK11BI GGWCC 2 cut(s) 1521, 1562
XagI CCTNNNNNAGG 1 cut(s) 603
XapI RAATTY 3 cut(s) 392, 1343, 1573
XbaI TCTAGA 1 cut(s) 1450
XceI RCATGY 3 cut(s) 1055, 1324, 1625
XhoI CTCGAG 1 cut(s) 485
XmiI GTMKAC 1 cut(s) 21
XmnI GAANNNNTTC 1 cut(s) 761
XspI CTAG 5 cut(s) 605, 627, 845, 1451, 1699
Zsp2I ATGCAT 3 cut(s) 386, 1057, 1548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.