Rh2CG097500

RRP12-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000835
Physical Location & Seq
Forward (+)
8090244 .. 8092815
2572 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG097500.1

Sequence Viewer

Length: 1752 bp
ATGGAAACACTAAACCCCACCACCAGCACCACCGTGGACGACGGTGACGACTCCGCGGGGAACATCGGCTTCTCAATCCTGATGCGCTTCTCTGACAGCCGTCGCGAAATCGACCTCGAAATCCGCAAGCTCATAACCGTCATGTGCCAGGTATTCCGAGACCACAAGGCTCCTCCGACGCCGCTGGCCTACTTGGGCGCAACGTGCTCCTCTCTCGACCTGATCGCCGCTTCGAAGCCCCGACCTTCCGATGACGTGCTCCACGCCCACATCATAATTCTGTCCATCGTCATCCCCAAAGTCCCGCCAGCATTTCTCATCAACAATCTCCAGTTGGTCTGCAATTCCTTAGCCCCAGCTCTTCGTTCTTCATCCCCAAGCTTCGACGGTGCCGCCTGCACAGGAGTTAAATGCATAGCTCAATTGCTCATTAGCAGCACTAACTGCGTCAACAACTGGTCACAAGTTTCGAAACCCTTCAGGCTCTTGTTCAGATTCGCTTATGTCTCCAGCATCGAGGTACGAGAACAAGCAGGTTTGTGTGTTCACGACACACTGCAAAGTTTTCGAGGAACTCCCCTGTTTGGCCCTGCAAGTAAAACCATTACTGACTTGTTAATGAAAAAATATCCTCCGCCACGTGTGGAATCAAATACTGATGGAGTTAATAGCATCGAACAACGCAAGGCCATGCATACTTTGAATCTTGTGATGCTATCCCTTGGCGCTATGTCAACCGTGGACAGAACTGCTGTGCTCGTCTACTTTATGGATCTCTTAGAACTGCACCATACCTATGTTACAAGACTCATCACAGATGCTCTGTACAGATTCTGCCTCAATCCATCATCACCAGATGTTGACCTCGAATTGTTGCTCGATCTAATATGCTCAATATGTCTTTCTGTCTCCCAACACAAGACGAATTACATCATGGAAACTATAGCTGGTTTGCTCAATTTTGGAGTGCCTAAAGTCTATTCCCTGAACAAGCAAATCTGCAAAATTAAACTCCCTATTATGTTTGATGCACTCATTGTTTTACTCGAACAGTCTGACTTAATGAACGTCCAAGATGCAGGAAACGCTTTTATGCGTCTTATTGCTTATATTGATGAAAGCATGATTAAACAGGGAGTTGACCGTGCTCTGATGAATGCAAATATGGATGATGGAAGCCAGTCTGAGCCAACTCCAATTGAAAAACTGTGTGCTACTTTTCCAAAGTTACTTTCTTATCGCTGCCCTACTATCCGGTACCTTGTTTTTGAAATAGTCTCAACAATGTTCAATAAATTAGGAGTATACTCTTCTTATTTGATGAGGGGTACAGTCAAGACCTTGGCAGACATGCAGATTTTGCCTGATAGAGAATTCCCTTTCAAGGAAGAGGTTAAGATTCTTCTAGAAATGGTTAGTGAGAAATGTGGGCTTGATGCTATTGCGGCCATTATCCCTCAAGAACACATGGAACTGCTTGCAGAGATCAATCAACAACTGGGTTCTAAATCTGTGGATGCGAGTTCTCATGTATCCCAAGCAACTACATCTGGGAATAACTTATCTCAGTCCAAGTATATGGACAATTATCGTCGATACTACAATATGAAACGGAAATTGGCTGGTAAAGAGAGTTTGTCTGATCGCCAGTGGAGAGCAGTTTTGGATAGGCAGGCTAGGAGAGATGCCAAGCAGGCTATCAGTAAAGGGATATTAGGTGCAGCCAGGATGGCAAAGAAGCTTAAACTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NUC173

Protein Analysis

583

Amino Acids

64.95

Weight (kDa)

8.4

Isoelectric Point (pI)

40.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HEAT_RRP12_N PF25772 16 - 284 7.8e-55 RRP12-like, N-terminal HEAT repeats
RRP12_HEAT PF08161 362 - 488 1.8e-12 Ribosomal RNA-processing protein 12, HEAT repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 524
Acc65I GGTACC 1 cut(s) 1257
AccB1I GGYRCC 2 cut(s) 389, 1257
AccI GTMKAC 2 cut(s) 762, 1305
AccII CGCG 2 cut(s) 56, 105
AciI CCGC 9 cut(s) 54, 56, 124, 182, 228, 305, 393, 635, 1445
AclWI GGATC 1 cut(s) 780
AcoI YGGCCR 1 cut(s) 1446
AcsI RAATTY 1 cut(s) 1373
AcuI CTGAAG 1 cut(s) 463
AcvI CACGTG 1 cut(s) 641
AcyI GRCGYC 1 cut(s) 179
AfaI GTAC 4 cut(s) 522, 827, 1259, 1330
AfiI CCNNNNNNNGG 2 cut(s) 584, 1384
AflIII ACRYGT 1 cut(s) 640
AgsI TTSAA 5 cut(s) 703, 1202, 1271, 1291, 1384
AjiI CACGTC 1 cut(s) 256
AjnI CCWGG 2 cut(s) 147, 1724
AjuI GAANNNNNNNTTGG 4 cut(s) 1216, 1248, 1601, 1633
AleI CACNNNNGTG 1 cut(s) 32
AluBI AGCT 6 cut(s) 130, 359, 381, 419, 947, 1741
AluI AGCT 6 cut(s) 130, 359, 381, 419, 947, 1741
Alw21I GWGCWC 4 cut(s) 209, 261, 759, 1150
Alw26I GTCTC 4 cut(s) 153, 511, 913, 1282
AlwI GGATC 1 cut(s) 780
AlwNI CAGNNNCTG 1 cut(s) 834
AoxI GGCC 4 cut(s) 186, 586, 687, 1446
ApeKI GCWGC 3 cut(s) 435, 1242, 1721
ApoI RAATTY 1 cut(s) 1373
Asp700I GAANNNNTTC 1 cut(s) 476
Asp718I GGTACC 1 cut(s) 1257
AspLEI GCGC 3 cut(s) 87, 200, 728
AspS9I GGNCC 1 cut(s) 587
AsuHPI GGTGA 2 cut(s) 56, 843
AsuII TTCGAA 2 cut(s) 233, 470
BanI GGYRCC 2 cut(s) 389, 1257
BbrPI CACGTG 1 cut(s) 641
Bbv12I GWGCWC 4 cut(s) 209, 261, 759, 1150
BbvI GCAGC 3 cut(s) 447, 1229, 1733
BccI CCATC 5 cut(s) 293, 653, 853, 1166, 1723
BceAI ACGGC 1 cut(s) 84
BcgI CGANNNNNNTGC 2 cut(s) 548, 582
BciT130I CCWGG 2 cut(s) 149, 1726
BciVI GTATCC 1 cut(s) 1543
BcoDI GTCTC 4 cut(s) 153, 511, 913, 1282
BfaI CTAG 2 cut(s) 1406, 1677
BfmI CTRYAG 1 cut(s) 942
BfoI RGCGCY 1 cut(s) 729
BfuAI ACCTGC 1 cut(s) 524
BfuI GTATCC 1 cut(s) 1543
BglI GCCNNNNNGGC 2 cut(s) 1694, 1730
BisI GCNGC 7 cut(s) 182, 228, 393, 436, 1243, 1446, 1722
BlsI GCNGC 7 cut(s) 183, 229, 394, 437, 1244, 1447, 1723
Bme1390I CCNGG 2 cut(s) 149, 1726
BmgBI CACGTC 1 cut(s) 256
BmgT120I GGNCC 1 cut(s) 587
BmiI GGNNCC 3 cut(s) 171, 391, 1259
BmrFI CCNGG 2 cut(s) 149, 1726
BmrI ACTGGG 1 cut(s) 1508
BmuI ACTGGG 1 cut(s) 1508
BoxI GACNNNNGTC 1 cut(s) 99
BpmI CTGGAG 2 cut(s) 314, 493
Bpu10I CCTNAGC 1 cut(s) 349
Bpu14I TTCGAA 2 cut(s) 233, 470
BpuEI CTTGAG 1 cut(s) 1443
BsaAI YACGTR 1 cut(s) 641
BsaHI GRCGYC 1 cut(s) 179
BsaI GGTCTC 1 cut(s) 153
BsaJI CCNNGG 5 cut(s) 33, 54, 721, 738, 1341
BsaWI WCCGGW 1 cut(s) 1254
Bsc4I CCNNNNNNNGG 2 cut(s) 584, 1384
Bse1I ACTGG 5 cut(s) 331, 461, 1180, 1503, 1648
BseBI CCWGG 2 cut(s) 149, 1726
BseDI CCNNGG 5 cut(s) 33, 54, 721, 738, 1341
BseGI GGATG 5 cut(s) 291, 371, 1174, 1522, 1734
BseLI CCNNNNNNNGG 2 cut(s) 584, 1384
BseMII CTCAG 2 cut(s) 1176, 1580
BseNI ACTGG 5 cut(s) 331, 461, 1180, 1503, 1648
BseRI GAGGAG 2 cut(s) 162, 199
BseXI GCAGC 3 cut(s) 447, 1229, 1733
BseYI CCCAGC 1 cut(s) 355
BsgI GTGCAG 3 cut(s) 382, 770, 1740
Bsh1236I CGCG 2 cut(s) 56, 105
BshFI GGCC 4 cut(s) 188, 588, 689, 1448
BshNI GGYRCC 2 cut(s) 389, 1257
BsiHKAI GWGCWC 4 cut(s) 209, 261, 759, 1150
BsiSI CCGG 1 cut(s) 1255
BslFI GGGAC 1 cut(s) 287
BslI CCNNNNNNNGG 2 cut(s) 584, 1384
BsmAI GTCTC 4 cut(s) 153, 511, 913, 1282
BsmFI GGGAC 1 cut(s) 287
BsmI GAATGC 1 cut(s) 1162
BsnI GGCC 4 cut(s) 188, 588, 689, 1448
Bso31I GGTCTC 1 cut(s) 153
Bsp119I TTCGAA 2 cut(s) 233, 470
Bsp1286I GDGCHC 4 cut(s) 209, 261, 759, 1150
Bsp1407I TGTACA 1 cut(s) 825
Bsp143I GATC 5 cut(s) 222, 772, 880, 1485, 1642
Bsp68I TCGCGA 1 cut(s) 105
BspACI CCGC 9 cut(s) 54, 56, 124, 182, 228, 305, 393, 635, 1445
BspANI GGCC 4 cut(s) 188, 588, 689, 1448
BspCNI CTCAG 2 cut(s) 1177, 1579
BspFNI CGCG 2 cut(s) 56, 105
BspLI GGNNCC 3 cut(s) 171, 391, 1259
BspMI ACCTGC 1 cut(s) 524
BspPI GGATC 1 cut(s) 780
BspQI GCTCTTC 1 cut(s) 366
BspT104I TTCGAA 2 cut(s) 233, 470
BspT107I GGYRCC 2 cut(s) 389, 1257
BspTNI GGTCTC 1 cut(s) 153
BsrGI TGTACA 1 cut(s) 825
BsrI ACTGG 5 cut(s) 331, 461, 1180, 1503, 1648
BssECI CCNNGG 5 cut(s) 33, 54, 721, 738, 1341
BssMI GATC 5 cut(s) 222, 772, 880, 1485, 1642
BssNAI GTATAC 1 cut(s) 1306
BssNI GRCGYC 1 cut(s) 179
BssT1I CCWWGG 2 cut(s) 721, 1341
Bst1107I GTATAC 1 cut(s) 1306
Bst2UI CCWGG 2 cut(s) 149, 1726
Bst4CI ACNGT 9 cut(s) 34, 44, 139, 389, 739, 1053, 1145, 1209, 1333
Bst6I CTCTTC 3 cut(s) 366, 1315, 1383
BstACI GRCGYC 1 cut(s) 179
BstAPI GCANNNNNTGC 2 cut(s) 444, 1360
BstAUI TGTACA 1 cut(s) 825
BstBAI YACGTR 1 cut(s) 641
BstBI TTCGAA 2 cut(s) 233, 470
BstC8I GCNNGC 7 cut(s) 128, 186, 309, 397, 1479, 1674, 1695
BstDEI CTNAG 4 cut(s) 349, 778, 1185, 1566
BstDSI CCRYGG 3 cut(s) 33, 54, 738
BstF5I GGATG 5 cut(s) 291, 371, 1174, 1522, 1734
BstFNI CGCG 2 cut(s) 56, 105
BstH2I RGCGCY 1 cut(s) 729
BstHHI GCGC 3 cut(s) 87, 200, 728
BstKTI GATC 5 cut(s) 225, 775, 883, 1488, 1645
BstMAI GTCTC 4 cut(s) 153, 511, 913, 1282
BstMBI GATC 5 cut(s) 222, 772, 880, 1485, 1642
BstMWI GCNNNNNNNGC 7 cut(s) 204, 444, 1085, 1360, 1445, 1694, 1730
BstNI CCWGG 2 cut(s) 149, 1726
BstNSI RCATGY 1 cut(s) 1354
BstPAI GACNNNNGTC 1 cut(s) 99
BstSCI CCNGG 2 cut(s) 147, 1724
BstSFI CTRYAG 1 cut(s) 942
BstUI CGCG 2 cut(s) 56, 105
BstV1I GCAGC 3 cut(s) 447, 1229, 1733
BstX2I RGATCY 1 cut(s) 772
BstXI CCANNNNNNTGG 1 cut(s) 1579
BstYI RGATCY 1 cut(s) 772
BstZ17I GTATAC 1 cut(s) 1306
BsuI GTATCC 1 cut(s) 1543
BsuRI GGCC 4 cut(s) 188, 588, 689, 1448
BtgI CCRYGG 3 cut(s) 33, 54, 738
BtrI CACGTC 1 cut(s) 256
BtsCI GGATG 5 cut(s) 291, 371, 1174, 1522, 1734
BtsI GCAGTG 1 cut(s) 554
BtsIMutI CAGTG 2 cut(s) 554, 1655
BtuMI TCGCGA 1 cut(s) 105
BveI ACCTGC 1 cut(s) 524
Cac8I GCNNGC 7 cut(s) 128, 186, 309, 397, 1479, 1674, 1695
CaiI CAGNNNCTG 1 cut(s) 834
CfoI GCGC 3 cut(s) 87, 200, 728
Cfr13I GGNCC 1 cut(s) 587
Cfr42I CCGCGG 1 cut(s) 57
CseI GACGC 3 cut(s) 187, 436, 1085
Csp6I GTAC 4 cut(s) 521, 826, 1258, 1329
CviAII CATG 7 cut(s) 142, 691, 934, 1123, 1351, 1468, 1529
CviQI GTAC 4 cut(s) 521, 826, 1258, 1329
DdeI CTNAG 4 cut(s) 349, 778, 1185, 1566
DpnI GATC 5 cut(s) 224, 774, 882, 1487, 1644
DpnII GATC 5 cut(s) 222, 772, 880, 1485, 1642
EaeI YGGCCR 1 cut(s) 1446
Eam1104I CTCTTC 3 cut(s) 366, 1315, 1383
EarI CTCTTC 3 cut(s) 366, 1315, 1383
EciI GGCGGA 1 cut(s) 624
Eco130I CCWWGG 2 cut(s) 721, 1341
Eco31I GGTCTC 1 cut(s) 153
Eco57I CTGAAG 1 cut(s) 463
Eco72I CACGTG 1 cut(s) 641
EcoRI GAATTC 1 cut(s) 1373
EcoRII CCWGG 2 cut(s) 147, 1724
EcoT14I CCWWGG 2 cut(s) 721, 1341
EcoT22I ATGCAT 2 cut(s) 416, 696
ErhI CCWWGG 2 cut(s) 721, 1341
FaeI CATG 7 cut(s) 145, 694, 937, 1126, 1354, 1471, 1532
FaqI GGGAC 1 cut(s) 287
FatI CATG 7 cut(s) 141, 690, 933, 1122, 1350, 1467, 1528
FauI CCCGC 2 cut(s) 49, 312
FblI GTMKAC 2 cut(s) 762, 1305
Fnu4HI GCNGC 7 cut(s) 182, 228, 393, 436, 1243, 1446, 1722
FokI GGATG 5 cut(s) 278, 358, 1181, 1529, 1741
Fsp4HI GCNGC 7 cut(s) 182, 228, 393, 436, 1243, 1446, 1722
FspBI CTAG 2 cut(s) 1406, 1677
GlaI GCGC 3 cut(s) 86, 199, 727
GluI GCNGC 7 cut(s) 182, 228, 393, 436, 1243, 1446, 1722
GsaI CCCAGC 1 cut(s) 359
GsuI CTGGAG 2 cut(s) 314, 493
HaeII RGCGCY 1 cut(s) 729
HaeIII GGCC 4 cut(s) 188, 588, 689, 1448
HapII CCGG 1 cut(s) 1255
HgaI GACGC 3 cut(s) 187, 436, 1085
HhaI GCGC 3 cut(s) 87, 200, 728
Hin1I GRCGYC 1 cut(s) 179
Hin1II CATG 7 cut(s) 145, 694, 937, 1126, 1354, 1471, 1532
Hin6I GCGC 3 cut(s) 85, 198, 726
HinP1I GCGC 3 cut(s) 85, 198, 726
HincII GTYRAC 4 cut(s) 451, 735, 862, 1141
HindII GTYRAC 4 cut(s) 451, 735, 862, 1141
HindIII AAGCTT 2 cut(s) 379, 1739
HinfI GANTC 7 cut(s) 50, 495, 647, 703, 807, 831, 1399
HpaII CCGG 1 cut(s) 1255
HphI GGTGA 2 cut(s) 56, 843
Hpy166II GTNNAC 9 cut(s) 37, 451, 547, 735, 742, 763, 862, 1141, 1306
Hpy188I TCNGA 9 cut(s) 94, 158, 177, 250, 494, 1057, 1152, 1186, 1642
Hpy188III TCNNGA 7 cut(s) 79, 104, 215, 548, 1336, 1406, 1460
Hpy8I GTNNAC 9 cut(s) 37, 451, 547, 735, 742, 763, 862, 1141, 1306
Hpy99I CGWCG 5 cut(s) 44, 105, 181, 389, 1596
HpyAV CCTTC 2 cut(s) 255, 487
HpyCH4III ACNGT 9 cut(s) 34, 44, 139, 389, 739, 1053, 1145, 1209, 1333
HpyCH4IV ACGT 4 cut(s) 203, 255, 640, 1068
HpyF10VI GCNNNNNNNGC 7 cut(s) 204, 444, 1085, 1360, 1445, 1694, 1730
HpyF3I CTNAG 4 cut(s) 349, 778, 1185, 1566
HpySE526I ACGT 4 cut(s) 203, 255, 640, 1068
Hsp92I GRCGYC 1 cut(s) 179
Hsp92II CATG 7 cut(s) 145, 694, 937, 1126, 1354, 1471, 1532
HspAI GCGC 3 cut(s) 85, 198, 726
KpnI GGTACC 1 cut(s) 1261
KspI CCGCGG 1 cut(s) 57
Kzo9I GATC 5 cut(s) 222, 772, 880, 1485, 1642
LguI GCTCTTC 1 cut(s) 366
LmnI GCTCC 3 cut(s) 175, 212, 264
Lsp1109I GCAGC 3 cut(s) 447, 1229, 1733
MaeI CTAG 2 cut(s) 1406, 1677
MaeII ACGT 4 cut(s) 203, 255, 640, 1068
MaeIII GTNAC 4 cut(s) 44, 459, 799, 1227
MalI GATC 5 cut(s) 224, 774, 882, 1487, 1644
MboI GATC 5 cut(s) 222, 772, 880, 1485, 1642
MboII GAAGA 5 cut(s) 353, 360, 1302, 1394, 1400
MfeI CAATTG 2 cut(s) 422, 1197
MflI RGATCY 1 cut(s) 772
MhlI GDGCHC 4 cut(s) 209, 261, 759, 1150
MlyI GAGTC 2 cut(s) 44, 801
MmeI TCCRAC 1 cut(s) 200
Mph1103I ATGCAT 2 cut(s) 416, 696
MroXI GAANNNNTTC 1 cut(s) 476
MseI TTAA 8 cut(s) 408, 617, 666, 1008, 1061, 1128, 1395, 1743
MslI CAYNNNNRTG 2 cut(s) 32, 795
MspA1I CMGCKG 2 cut(s) 56, 184
MspI CCGG 1 cut(s) 1255
MspR9I CCNGG 2 cut(s) 149, 1726
MunI CAATTG 2 cut(s) 422, 1197
Mva1269I GAATGC 1 cut(s) 1162
MvaI CCWGG 2 cut(s) 149, 1726
MvnI CGCG 2 cut(s) 56, 105
MwoI GCNNNNNNNGC 7 cut(s) 204, 444, 1085, 1360, 1445, 1694, 1730
NdeII GATC 5 cut(s) 222, 772, 880, 1485, 1642
NlaIII CATG 7 cut(s) 145, 694, 937, 1126, 1354, 1471, 1532
NlaIV GGNNCC 3 cut(s) 171, 391, 1259
NmuCI GTSAC 2 cut(s) 44, 459
NruI TCGCGA 1 cut(s) 105
NsiI ATGCAT 2 cut(s) 416, 696
NspI RCATGY 1 cut(s) 1354
NspV TTCGAA 2 cut(s) 233, 470
OliI CACNNNNGTG 1 cut(s) 32
PciSI GCTCTTC 1 cut(s) 366
PcsI WCGNNNNNNNCGW 1 cut(s) 45
PctI GAATGC 1 cut(s) 1162
PdmI GAANNNNTTC 1 cut(s) 476
PfeI GAWTC 5 cut(s) 495, 647, 703, 831, 1399
PkrI GCNGC 7 cut(s) 183, 229, 394, 437, 1244, 1447, 1723
PleI GAGTC 2 cut(s) 44, 801
PmaCI CACGTG 1 cut(s) 641
PmlI CACGTG 1 cut(s) 641
PpsI GAGTC 2 cut(s) 44, 801
Ppu21I YACGTR 1 cut(s) 641
PshAI GACNNNNGTC 1 cut(s) 99
Psp6I CCWGG 2 cut(s) 147, 1724
PspCI CACGTG 1 cut(s) 641
PspFI CCCAGC 1 cut(s) 355
PspGI CCWGG 2 cut(s) 147, 1724
PspN4I GGNNCC 3 cut(s) 171, 391, 1259
PspPI GGNCC 1 cut(s) 587
PstNI CAGNNNCTG 1 cut(s) 834
PsuI RGATCY 1 cut(s) 772
RruI TCGCGA 1 cut(s) 105
RsaI GTAC 4 cut(s) 522, 827, 1259, 1330
RsaNI GTAC 4 cut(s) 521, 826, 1258, 1329
RseI CAYNNNNRTG 2 cut(s) 32, 795
SacII CCGCGG 1 cut(s) 57
SapI GCTCTTC 1 cut(s) 366
SaqAI TTAA 8 cut(s) 408, 617, 666, 1008, 1061, 1128, 1395, 1743
SatI GCNGC 7 cut(s) 182, 228, 393, 436, 1243, 1446, 1722
Sau3AI GATC 5 cut(s) 222, 772, 880, 1485, 1642
Sau96I GGNCC 1 cut(s) 587
SchI GAGTC 2 cut(s) 44, 801
ScrFI CCNGG 2 cut(s) 149, 1726
SduI GDGCHC 4 cut(s) 209, 261, 759, 1150
SfcI CTRYAG 1 cut(s) 942
Sfr303I CCGCGG 1 cut(s) 57
SfuI TTCGAA 2 cut(s) 233, 470
SgrBI CCGCGG 1 cut(s) 57
SmiMI CAYNNNNRTG 2 cut(s) 32, 795
SmlI CTYRAG 1 cut(s) 1458
SmoI CTYRAG 1 cut(s) 1458
SsiI CCGC 9 cut(s) 54, 56, 124, 182, 228, 305, 393, 635, 1445
SspMI CTAG 2 cut(s) 1406, 1677
StyD4I CCNGG 2 cut(s) 147, 1724
StyI CCWWGG 2 cut(s) 721, 1341
TaaI ACNGT 9 cut(s) 34, 44, 139, 389, 739, 1053, 1145, 1209, 1333
TaiI ACGT 4 cut(s) 206, 258, 643, 1071
TatI WGTACW 1 cut(s) 825
TauI GCSGC 4 cut(s) 184, 230, 395, 1448
TfiI GAWTC 5 cut(s) 495, 647, 703, 831, 1399
Tru1I TTAA 8 cut(s) 408, 617, 666, 1008, 1061, 1128, 1395, 1743
Tru9I TTAA 8 cut(s) 408, 617, 666, 1008, 1061, 1128, 1395, 1743
TscAI CASTG 2 cut(s) 561, 1655
TseFI GTSAC 2 cut(s) 44, 459
TseI GCWGC 3 cut(s) 435, 1242, 1721
Tsp45I GTSAC 2 cut(s) 44, 459
TspDTI ATGAA 6 cut(s) 360, 635, 1079, 1131, 1169, 1622
TspGWI ACGGA 1 cut(s) 1627
TspRI CASTG 2 cut(s) 561, 1655
XapI RAATTY 1 cut(s) 1373
XbaI TCTAGA 1 cut(s) 1405
XceI RCATGY 1 cut(s) 1354
XcmI CCANNNNNNNNNTGG 1 cut(s) 31
XmiI GTMKAC 2 cut(s) 762, 1305
XmnI GAANNNNTTC 1 cut(s) 476
XspI CTAG 2 cut(s) 1406, 1677
Zsp2I ATGCAT 2 cut(s) 416, 696
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.