Rorug02G0047900

RRP12-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000190
Physical Location & Seq
Forward (+)
3697528 .. 3699851
2324 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0047900.1

Sequence Viewer

Length: 1380 bp
ATGGTGTCAACAATTCTCTCACCCACATCCTCATTTCCCTCCAATTCCAACCCTTACTCTGATGCCTCTTCCACCTCTACCAGCTTCAACAAATCCAGACTACCCTTTGAACCTTCCAGAAGAACCCTTCAACTTCCCAAATCCCTAAAGCTACTTCCTTTCAGGGCCTCTGTTGGCCCAATTGAGGATGGCTCAGCTGAGCAGTTTTTGCAGAACAATTCTATTGGGGACTTCATGAGGTTCAAGACTGGCGTTGATGGAGGCACTGGGGAGTTGCAGACTGCTGTTGTTAGCTACAAGAAGAAGTTCCCTTGGTCTCTTTTGAAGCCTTTTCTTCAGGTTGATTTGGTTTCCACAATTCACATAGCGGATAAAGAGTACTTTTCCACCCTCCAAAAGGAGCTCGAGTCCTATGATGCTGTTCTTTTTGAGATGGTGACCAGCAGGGAGAGTTTGGAGAATAGAAGAAACCTTGCTGCCACAAGAAGACTCAAAGTCAAAAGTCCACGCTCAAGAAGCTTTAACATTCTGGGATGCATTCAGCGGCAGATGGCTCGTTCTCTGACGCTTGATTTCCAGTTAGACTGTATGGATTATGAGTCTGAGAAATGGTACCATGCAGATCTCGACTTCGAGACTTTCAAGTTGCTTCAGGATGAAAAAGGTGAAAGCTTCTTCAGCTTTGCAAGGGATATGACAATTAGATCCACGAAAGCTATGATGCAACCTGAAATTCCAGAAGACCTTGATCCTTGGAGATCTAAGCTTTTATGGGCCTCACGTGTGCTTCCGATGCCACTTGTTGGCCTCCTCATTATTGGAGGTGTTTGTGCAGACACAGGCAGCCGGCCATCAGAATTCCCAGAACTAGAAGCCTTATCCAGGCTTGATTTTGGTGGTGCAATGAAGGTCTTCTTGGCCAAAAGACTAACATCGGAATTCACACAGGCGACAGCTGATGTAGAAGAGAGTTCTGTGATCATTGGTGAGAGAAACAGAGCTGCCATGGAGGCTCTCACAAAAGCAATTGACGACGGGCACAATAGGATTGCAATATTATACGGAGGTGGTCACATGCCTGATCTAGGAAGGAGATTACAAGAGTTGGACCTGATCCCTTCTCGGGCGCAGTGGGTAACGGCGTGGTCCATAAAGAAGAGGAATTTTAACAGCAATTCCCTTCCATTTCTGAAGACAATGGCTGAAGTTTCAGGTTGGCCTTTGAATCGCTACCAGACTTTGGCATTGCTCATATTTTCGTCGGTGCTTGCAATAGATCTCTGGTTCTGGGAGCTCTTTTTTGGCACTGCTGTCGACTTTTTCTCTCTAGTTGGTTCACAGATTTCCCAGTATGTTGATAATCCACATATGATCTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NUC173

Protein Analysis

459

Amino Acids

51.89

Weight (kDa)

6.29

Isoelectric Point (pI)

51.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000190)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G03480 AT5G17540
fragaria_vesca FvH4_2g12510 FvH4_3g38880 FvH4_3g40890 FvH4_5g24240 FvH4_5g24250 FvH4_5g24270 FvH4_5g24273 FvH4_6g05391 FvH4_6g05392
malus_domestica MD00G1201900.v1.1 MD00G1202100.v1.1 MD02G1001400.v1.1 MD02G1013900.v1.1 MD02G1014800.v1.1 MD02G1015000.v1.1 MD02G1015200.v1.1 MD03G1080200.v1.1 MD06G1016200.v1.1 MD06G1016500.v1.1 MD06G1017700.v1.1 MD06G1018100.v1.1 MD06G1018200.v1.1 MD06G1018400.v1.1 MD06G1018700.v1.1 MD06G1018800.v1.1 MD06G1019000.v1.1 MD06G1019100.v1.1 MD06G1019300.v1.1 MD06G1019800.v1.1 MD06G1020400.v1.1 MD06G1020700.v1.1 MD06G1020800.v1.1 MD06G1020900.v1.1 MD12G1038300.v1.1 MD12G1039400.v1.1
prunus_persica Prupe.5G017800_v2.0.a1 Prupe.5G017900_v2.0.a1 Prupe.5G018000_v2.0.a1 Prupe.5G018100_v2.0.a1 Prupe.5G018200_v2.0.a1 Prupe.8G000100_v2.0.a1
pyrus_communis pycom02g01330 pycom02g01390 pycom03g06420 pycom06g01300 pycom06g01320 pycom06g01340 pycom06g01500 pycom06g01510 pycom06g01520 pycom12g03300 pycom12g03320
rosa_chinensis RchiOBHm_Chr5g0051841 RchiOBHm_Chr6g0272991 RchiOBHm_Chr7g0213951 RchiOBHm_Chr7g0214051 RchiOBHm_Chr7g0214131 RchiOBHm_Chr7g0214161 RchiOBHm_Chr7g0214231 RchiOBHm_Chr7g0214321 RchiOBHm_Chr7g0214351 RchiOBHm_Chr7g0214391 RchiOBHm_Chr7g0214451 RchiOBHm_Chr7g0222591
rosa_laevigata RLG00000002044 RLG00000002744 RLG00000002751 RLG00000002752 RLG00000002755 RLG00000002756 RLG00000002757 RLG00000002758 RLG00000002762 RLG00000002763 RLG00000013652
rosa_multiflora Rmu_sc0000328.1_g000008 Rmu_sc0003764.1_g000001 Rmu_sc0003764.1_g000002 Rmu_sc0004199.1_g000004 Rmu_sc0004199.1_g000006 Rmu_sc0004199.1_g000014 Rmu_sc0004199.1_g000019 Rmu_sc0004199.1_g000022 Rmu_sc0005063.1_g000018 Rmu_sc0006422.1_g000030 Rmu_sc0006422.1_g000031 Rmu_sc0009579.1_g000011 Rmu_sc0009579.1_g000017 Rmu_sc0016182.1_g000005 Rmu_sc0016182.1_g000007 Rmu_sc0016279.1_g000002 Rmu_ssc0000387.1_g000031
rosa_roxburghii Rroxscaffold_1G00027390 Rroxscaffold_2G00146810 Rroxscaffold_3G00236600 Rroxscaffold_3G00236620 Rroxscaffold_3G00245350 Rroxscaffold_3G00245400 Rroxscaffold_3G00245440 Rroxscaffold_3G00245480 Rroxscaffold_3G00245560 Rroxscaffold_7G00195770
rosa_rugosa Rorug02G0047800 Rorug02G0047900 Rorug05G0276800 Rorug06G0071900 Rorug07G0145400 Rorug07G0145500 Rorug07G0145600 Rorug07G0145700 Rorug07G0145700 Rorug07G0145800 Rorug07G0211200
rosa_samantha Rh5BG359700 Rh6AG187600 Rh6DG181500 Rh7AG278000 Rh7AG278900 Rh7AG279800 Rh7AG279900 Rh7AG280100 Rh7AG280400 Rh7AG280700 Rh7AG281200 Rh7AG354300 Rh7AG354800 Rh7BG272300 Rh7BG272500 Rh7BG272600 Rh7BG272700 Rh7BG272800 Rh7BG273000 Rh7BG343200 Rh7CG297000 Rh7CG297900 Rh7CG298100 Rh7CG298800 Rh7CG299100 Rh7CG299300 Rh7CG299400 Rh7CG300000 Rh7CG300200 Rh7CG300600 Rh7CG371800 Rh7CG371900
rosa_wichuraiana Rw5G032880 Rw6G016270 Rw7G023930 Rw7G023980 Rw7G023990 Rw7G024000 Rw7G024010 Rw7G024020 Rw7G024030 Rw7G029800 Rw7G030090 Rw7G030140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 612
AccB1I GGYRCC 1 cut(s) 612
AccB7I CCANNNNNTGG 2 cut(s) 803, 1240
AccI GTMKAC 1 cut(s) 1314
AciI CCGC 2 cut(s) 368, 544
AclWI GGATC 3 cut(s) 699, 743, 1108
AcoI YGGCCR 2 cut(s) 848, 918
AcsI RAATTY 4 cut(s) 732, 857, 938, 1162
AcuI CTGAAG 5 cut(s) 320, 635, 661, 1211, 1224
AcvI CACGTG 1 cut(s) 782
AfaI GTAC 2 cut(s) 380, 614
AfiI CCNNNNNNNGG 7 cut(s) 184, 397, 803, 882, 1085, 1123, 1240
AflIII ACRYGT 1 cut(s) 781
AgsI TTSAA 7 cut(s) 88, 110, 131, 244, 325, 643, 1225
AhdI GACNNNNNGTC 1 cut(s) 494
AjnI CCWGG 1 cut(s) 881
AjuI GAANNNNNNNTTGG 2 cut(s) 899, 931
Alw21I GWGCWC 2 cut(s) 405, 1296
Alw26I GTCTC 2 cut(s) 321, 629
AlwI GGATC 3 cut(s) 699, 743, 1108
Ama87I CYCGRG 2 cut(s) 404, 1122
AoxI GGCC 7 cut(s) 165, 175, 774, 805, 848, 918, 1217
ApeKI GCWGC 3 cut(s) 476, 843, 1001
ApoI RAATTY 4 cut(s) 732, 857, 938, 1162
Asp700I GAANNNNTTC 2 cut(s) 305, 911
Asp718I GGTACC 1 cut(s) 612
AspLEI GCGC 1 cut(s) 1129
AspS9I GGNCC 5 cut(s) 165, 176, 774, 1108, 1146
AsuHPI GGTGA 4 cut(s) 12, 448, 677, 998
AvaI CYCGRG 2 cut(s) 404, 1122
AvaII GGWCC 2 cut(s) 1108, 1146
BaeGI GKGCMC 1 cut(s) 1041
BalI TGGCCA 1 cut(s) 920
BanI GGYRCC 1 cut(s) 612
BanII GRGCYC 2 cut(s) 405, 1296
BbrPI CACGTG 1 cut(s) 782
BbsI GAAGAC 4 cut(s) 493, 747, 904, 1199
Bbv12I GWGCWC 2 cut(s) 405, 1296
BbvI GCAGC 3 cut(s) 463, 855, 988
BccI CCATC 5 cut(s) 182, 251, 427, 544, 859
BceAI ACGGC 1 cut(s) 1155
BcgI CGANNNNNNTGC 4 cut(s) 536, 570, 1294, 1328
BciT130I CCWGG 1 cut(s) 883
BclI TGATCA 1 cut(s) 978
BcoDI GTCTC 2 cut(s) 321, 629
BfaI CTAG 3 cut(s) 869, 1085, 1328
BglI GCCNNNNNGGC 1 cut(s) 1010
BglII AGATCT 3 cut(s) 622, 758, 1276
BisI GCNGC 4 cut(s) 477, 545, 844, 1002
BlpI GCTNAGC 2 cut(s) 193, 198
BlsI GCNGC 4 cut(s) 478, 546, 845, 1003
BmcAI AGTACT 1 cut(s) 380
Bme1390I CCNGG 1 cut(s) 883
Bme18I GGWCC 2 cut(s) 1108, 1146
BmeRI GACNNNNNGTC 1 cut(s) 494
BmeT110I CYCGRG 2 cut(s) 404, 1122
BmgT120I GGNCC 5 cut(s) 165, 176, 774, 1108, 1146
BmiI GGNNCC 1 cut(s) 614
BmrFI CCNGG 1 cut(s) 883
BmrI ACTGGG 2 cut(s) 276, 1342
BmsI GCATC 5 cut(s) 52, 406, 524, 711, 783
BmuI ACTGGG 2 cut(s) 276, 1342
BpiI GAAGAC 4 cut(s) 493, 747, 904, 1199
BplI GAGNNNNNCTC 2 cut(s) 176, 208
Bpu1102I GCTNAGC 2 cut(s) 193, 198
BpuEI CTTGAG 1 cut(s) 496
BsaAI YACGTR 1 cut(s) 782
BsaI GGTCTC 1 cut(s) 321
BsaJI CCNNGG 3 cut(s) 311, 752, 1005
BsaXI ACNNNNNCTCC 2 cut(s) 392, 422
Bsc4I CCNNNNNNNGG 7 cut(s) 184, 397, 803, 882, 1085, 1123, 1240
Bse118I RCCGGY 1 cut(s) 846
Bse1I ACTGG 4 cut(s) 253, 271, 577, 1348
Bse3DI GCAATG 2 cut(s) 909, 1244
BseBI CCWGG 1 cut(s) 883
BseDI CCNNGG 3 cut(s) 311, 752, 1005
BseGI GGATG 4 cut(s) 26, 193, 539, 661
BseLI CCNNNNNNNGG 7 cut(s) 184, 397, 803, 882, 1085, 1123, 1240
BseMI GCAATG 2 cut(s) 909, 1244
BseMII CTCAG 3 cut(s) 189, 207, 594
BseNI ACTGG 4 cut(s) 253, 271, 577, 1348
BseRI GAGGAG 1 cut(s) 800
BseSI GKGCMC 1 cut(s) 1041
BseXI GCAGC 3 cut(s) 463, 855, 988
BsgI GTGCAG 1 cut(s) 852
BshFI GGCC 7 cut(s) 167, 177, 776, 807, 850, 920, 1219
BshNI GGYRCC 1 cut(s) 612
BsiHKAI GWGCWC 2 cut(s) 405, 1296
BsiHKCI CYCGRG 2 cut(s) 404, 1122
BsiSI CCGG 1 cut(s) 847
BslFI GGGAC 1 cut(s) 242
BslI CCNNNNNNNGG 7 cut(s) 184, 397, 803, 882, 1085, 1123, 1240
BsmAI GTCTC 2 cut(s) 321, 629
BsmFI GGGAC 1 cut(s) 242
BsmI GAATGC 1 cut(s) 537
BsnI GGCC 7 cut(s) 167, 177, 776, 807, 850, 920, 1219
Bso31I GGTCTC 1 cut(s) 321
BsoBI CYCGRG 2 cut(s) 404, 1122
Bsp1286I GDGCHC 3 cut(s) 405, 1041, 1296
Bsp143I GATC 9 cut(s) 622, 704, 748, 758, 978, 1081, 1113, 1276, 1371
Bsp1720I GCTNAGC 2 cut(s) 193, 198
Bsp19I CCATGG 1 cut(s) 1005
BspACI CCGC 2 cut(s) 368, 544
BspANI GGCC 7 cut(s) 167, 177, 776, 807, 850, 920, 1219
BspCNI CTCAG 3 cut(s) 190, 206, 595
BspHI TCATGA 1 cut(s) 234
BspLI GGNNCC 1 cut(s) 614
BspPI GGATC 3 cut(s) 699, 743, 1108
BspT107I GGYRCC 1 cut(s) 612
BspTNI GGTCTC 1 cut(s) 321
BsrDI GCAATG 2 cut(s) 909, 1244
BsrFI RCCGGY 1 cut(s) 846
BsrI ACTGG 4 cut(s) 253, 271, 577, 1348
BssAI RCCGGY 1 cut(s) 846
BssECI CCNNGG 3 cut(s) 311, 752, 1005
BssMI GATC 9 cut(s) 622, 704, 748, 758, 978, 1081, 1113, 1276, 1371
BssT1I CCWWGG 3 cut(s) 311, 752, 1005
Bst2UI CCWGG 1 cut(s) 883
Bst4CI ACNGT 1 cut(s) 587
Bst6I CTCTTC 3 cut(s) 73, 960, 1151
BstAPI GCANNNNNTGC 1 cut(s) 208
BstBAI YACGTR 1 cut(s) 782
BstC8I GCNNGC 2 cut(s) 848, 1269
BstDEI CTNAG 4 cut(s) 193, 198, 603, 762
BstDSI CCRYGG 1 cut(s) 1005
BstEII GGTNACC 1 cut(s) 436
BstENI CCTNNNNNAGG 3 cut(s) 395, 880, 1083
BstF5I GGATG 4 cut(s) 26, 193, 539, 661
BstHHI GCGC 1 cut(s) 1129
BstKTI GATC 9 cut(s) 625, 707, 751, 761, 981, 1084, 1116, 1279, 1374
BstMAI GTCTC 2 cut(s) 321, 629
BstMBI GATC 9 cut(s) 622, 704, 748, 758, 978, 1081, 1113, 1276, 1371
BstMWI GCNNNNNNNGC 5 cut(s) 208, 516, 678, 793, 1010
BstNI CCWGG 1 cut(s) 883
BstNSI RCATGY 1 cut(s) 1078
BstPI GGTNACC 1 cut(s) 436
BstSCI CCNGG 1 cut(s) 881
BstSLI GKGCMC 1 cut(s) 1041
BstV1I GCAGC 3 cut(s) 463, 855, 988
BstV2I GAAGAC 4 cut(s) 493, 747, 904, 1199
BstX2I RGATCY 4 cut(s) 622, 704, 758, 1276
BstYI RGATCY 4 cut(s) 622, 704, 758, 1276
BsuRI GGCC 7 cut(s) 167, 177, 776, 807, 850, 920, 1219
BtgI CCRYGG 1 cut(s) 1005
BtsCI GGATG 4 cut(s) 26, 193, 539, 661
BtsI GCAGTG 2 cut(s) 1136, 1305
BtsIMutI CAGTG 3 cut(s) 264, 1136, 1305
Cac8I GCNNGC 2 cut(s) 848, 1269
CciI TCATGA 1 cut(s) 234
CfoI GCGC 1 cut(s) 1129
Cfr10I RCCGGY 1 cut(s) 846
Cfr13I GGNCC 5 cut(s) 165, 176, 774, 1108, 1146
CseI GACGC 1 cut(s) 574
Csp6I GTAC 2 cut(s) 379, 613
CviAII CATG 4 cut(s) 235, 617, 1006, 1075
CviQI GTAC 2 cut(s) 379, 613
DdeI CTNAG 4 cut(s) 193, 198, 603, 762
DpnI GATC 9 cut(s) 624, 706, 750, 760, 980, 1083, 1115, 1278, 1373
DpnII GATC 9 cut(s) 622, 704, 748, 758, 978, 1081, 1113, 1276, 1371
DriI GACNNNNNGTC 1 cut(s) 494
EaeI YGGCCR 2 cut(s) 848, 918
Eam1104I CTCTTC 3 cut(s) 73, 960, 1151
Eam1105I GACNNNNNGTC 1 cut(s) 494
EarI CTCTTC 3 cut(s) 73, 960, 1151
Ecl136II GAGCTC 2 cut(s) 403, 1294
Eco130I CCWWGG 3 cut(s) 311, 752, 1005
Eco24I GRGCYC 2 cut(s) 405, 1296
Eco31I GGTCTC 1 cut(s) 321
Eco47I GGWCC 2 cut(s) 1108, 1146
Eco53kI GAGCTC 2 cut(s) 403, 1294
Eco57I CTGAAG 5 cut(s) 320, 635, 661, 1211, 1224
Eco72I CACGTG 1 cut(s) 782
Eco88I CYCGRG 2 cut(s) 404, 1122
Eco91I GGTNACC 1 cut(s) 436
EcoICRI GAGCTC 2 cut(s) 403, 1294
EcoNI CCTNNNNNAGG 3 cut(s) 395, 880, 1083
EcoO109I RGGNCCY 1 cut(s) 165
EcoO65I GGTNACC 1 cut(s) 436
EcoRI GAATTC 2 cut(s) 857, 938
EcoRII CCWGG 1 cut(s) 881
EcoT14I CCWWGG 3 cut(s) 311, 752, 1005
EcoT22I ATGCAT 1 cut(s) 539
EcoT38I GRGCYC 2 cut(s) 405, 1296
ErhI CCWWGG 3 cut(s) 311, 752, 1005
FaeI CATG 4 cut(s) 238, 620, 1009, 1078
FalI AAGNNNNNCTT 2 cut(s) 899, 931
FaqI GGGAC 1 cut(s) 242
FatI CATG 4 cut(s) 234, 616, 1005, 1074
FauNDI CATATG 1 cut(s) 1368
FbaI TGATCA 1 cut(s) 978
FblI GTMKAC 1 cut(s) 1314
Fnu4HI GCNGC 4 cut(s) 477, 545, 844, 1002
FokI GGATG 4 cut(s) 13, 200, 546, 668
FriOI GRGCYC 2 cut(s) 405, 1296
Fsp4HI GCNGC 4 cut(s) 477, 545, 844, 1002
FspBI CTAG 3 cut(s) 869, 1085, 1328
GlaI GCGC 1 cut(s) 1128
GluI GCNGC 4 cut(s) 477, 545, 844, 1002
HaeIII GGCC 7 cut(s) 167, 177, 776, 807, 850, 920, 1219
HapII CCGG 1 cut(s) 847
HgaI GACGC 1 cut(s) 574
HhaI GCGC 1 cut(s) 1129
Hin1II CATG 4 cut(s) 238, 620, 1009, 1078
Hin6I GCGC 1 cut(s) 1127
HinP1I GCGC 1 cut(s) 1127
HincII GTYRAC 2 cut(s) 9, 1315
HindII GTYRAC 2 cut(s) 9, 1315
HindIII AAGCTT 3 cut(s) 517, 670, 764
HinfI GANTC 4 cut(s) 407, 489, 599, 1225
HpaII CCGG 1 cut(s) 847
HphI GGTGA 4 cut(s) 12, 448, 677, 998
Hpy166II GTNNAC 4 cut(s) 9, 506, 1315, 1337
Hpy188I TCNGA 7 cut(s) 61, 564, 604, 792, 856, 937, 1191
Hpy188III TCNNGA 9 cut(s) 96, 117, 235, 244, 513, 626, 634, 653, 737
Hpy8I GTNNAC 4 cut(s) 9, 506, 1315, 1337
Hpy99I CGWCG 2 cut(s) 1037, 1264
HpyAV CCTTC 6 cut(s) 123, 137, 901, 1083, 1128, 1190
HpyCH4III ACNGT 1 cut(s) 587
HpyCH4IV ACGT 1 cut(s) 781
HpyF10VI GCNNNNNNNGC 5 cut(s) 208, 516, 678, 793, 1010
HpyF3I CTNAG 4 cut(s) 193, 198, 603, 762
HpySE526I ACGT 1 cut(s) 781
Hsp92II CATG 4 cut(s) 238, 620, 1009, 1078
HspAI GCGC 1 cut(s) 1127
KpnI GGTACC 1 cut(s) 616
KroI GCCGGC 1 cut(s) 846
KroNI GCCGGC 1 cut(s) 848
Ksp22I TGATCA 1 cut(s) 978
Kzo9I GATC 9 cut(s) 622, 704, 748, 758, 978, 1081, 1113, 1276, 1371
LmnI GCTCC 2 cut(s) 400, 1291
Lsp1109I GCAGC 3 cut(s) 463, 855, 988
LweI GCATC 5 cut(s) 52, 406, 524, 711, 783
MaeI CTAG 3 cut(s) 869, 1085, 1328
MaeII ACGT 1 cut(s) 781
MaeIII GTNAC 3 cut(s) 436, 1070, 1135
MalI GATC 9 cut(s) 624, 706, 750, 760, 980, 1083, 1115, 1278, 1373
MboI GATC 9 cut(s) 622, 704, 748, 758, 978, 1081, 1113, 1276, 1371
MfeI CAATTG 2 cut(s) 180, 1026
MflI RGATCY 4 cut(s) 622, 704, 758, 1276
MhlI GDGCHC 3 cut(s) 405, 1041, 1296
MlsI TGGCCA 1 cut(s) 920
MluNI TGGCCA 1 cut(s) 920
MlyI GAGTC 3 cut(s) 416, 483, 608
MmeI TCCRAC 2 cut(s) 72, 1086
Mox20I TGGCCA 1 cut(s) 920
Mph1103I ATGCAT 1 cut(s) 539
MroNI GCCGGC 1 cut(s) 846
MroXI GAANNNNTTC 2 cut(s) 305, 911
MscI TGGCCA 1 cut(s) 920
MseI TTAA 2 cut(s) 522, 1167
Msp20I TGGCCA 1 cut(s) 920
MspA1I CMGCKG 3 cut(s) 197, 544, 956
MspI CCGG 1 cut(s) 847
MspR9I CCNGG 1 cut(s) 883
MunI CAATTG 2 cut(s) 180, 1026
Mva1269I GAATGC 1 cut(s) 537
MvaI CCWGG 1 cut(s) 883
MwoI GCNNNNNNNGC 5 cut(s) 208, 516, 678, 793, 1010
NaeI GCCGGC 1 cut(s) 848
NcoI CCATGG 1 cut(s) 1005
NdeI CATATG 1 cut(s) 1368
NdeII GATC 9 cut(s) 622, 704, 748, 758, 978, 1081, 1113, 1276, 1371
NgoMIV GCCGGC 1 cut(s) 846
NlaIII CATG 4 cut(s) 238, 620, 1009, 1078
NlaIV GGNNCC 1 cut(s) 614
NmuCI GTSAC 2 cut(s) 436, 1070
NsiI ATGCAT 1 cut(s) 539
NspI RCATGY 1 cut(s) 1078
PaeR7I CTCGAG 1 cut(s) 404
PagI TCATGA 1 cut(s) 234
PctI GAATGC 1 cut(s) 537
PdiI GCCGGC 1 cut(s) 848
PdmI GAANNNNTTC 2 cut(s) 305, 911
PfeI GAWTC 1 cut(s) 1225
PflMI CCANNNNNTGG 2 cut(s) 803, 1240
PkrI GCNGC 4 cut(s) 478, 546, 845, 1003
PleI GAGTC 3 cut(s) 415, 483, 607
PmaCI CACGTG 1 cut(s) 782
PmlI CACGTG 1 cut(s) 782
PpsI GAGTC 3 cut(s) 415, 483, 607
Ppu21I YACGTR 1 cut(s) 782
Psp124BI GAGCTC 2 cut(s) 405, 1296
Psp6I CCWGG 1 cut(s) 881
PspCI CACGTG 1 cut(s) 782
PspEI GGTNACC 1 cut(s) 436
PspGI CCWGG 1 cut(s) 881
PspN4I GGNNCC 1 cut(s) 614
PspPI GGNCC 5 cut(s) 165, 176, 774, 1108, 1146
PspXI VCTCGAGB 1 cut(s) 404
PsuI RGATCY 4 cut(s) 622, 704, 758, 1276
PvuII CAGCTG 2 cut(s) 197, 956
RsaI GTAC 2 cut(s) 380, 614
RsaNI GTAC 2 cut(s) 379, 613
SacI GAGCTC 2 cut(s) 405, 1296
SalI GTCGAC 1 cut(s) 1313
SaqAI TTAA 2 cut(s) 522, 1167
SatI GCNGC 4 cut(s) 477, 545, 844, 1002
Sau3AI GATC 9 cut(s) 622, 704, 748, 758, 978, 1081, 1113, 1276, 1371
Sau96I GGNCC 5 cut(s) 165, 176, 774, 1108, 1146
ScaI AGTACT 1 cut(s) 380
SchI GAGTC 3 cut(s) 416, 483, 608
ScrFI CCNGG 1 cut(s) 883
SduI GDGCHC 3 cut(s) 405, 1041, 1296
SfaNI GCATC 5 cut(s) 52, 406, 524, 711, 783
Sfr274I CTCGAG 1 cut(s) 404
SinI GGWCC 2 cut(s) 1108, 1146
SlaI CTCGAG 1 cut(s) 404
SmlI CTYRAG 2 cut(s) 404, 511
SmoI CTYRAG 2 cut(s) 404, 511
SsiI CCGC 2 cut(s) 368, 544
SspI AATATT 1 cut(s) 1056
SspMI CTAG 3 cut(s) 869, 1085, 1328
SstI GAGCTC 2 cut(s) 405, 1296
StyD4I CCNGG 1 cut(s) 881
StyI CCWWGG 3 cut(s) 311, 752, 1005
TaaI ACNGT 1 cut(s) 587
TaiI ACGT 1 cut(s) 784
TaqI TCGA 4 cut(s) 405, 627, 633, 1314
TatI WGTACW 1 cut(s) 378
TauI GCSGC 1 cut(s) 547
TfiI GAWTC 1 cut(s) 1225
Tru1I TTAA 2 cut(s) 522, 1167
Tru9I TTAA 2 cut(s) 522, 1167
TscAI CASTG 3 cut(s) 271, 1136, 1312
TseFI GTSAC 2 cut(s) 436, 1070
TseI GCWGC 3 cut(s) 476, 843, 1001
Tsp45I GTSAC 2 cut(s) 436, 1070
TspDTI ATGAA 3 cut(s) 223, 672, 920
TspGWI ACGGA 1 cut(s) 1077
TspRI CASTG 3 cut(s) 271, 1136, 1312
Van91I CCANNNNNTGG 2 cut(s) 803, 1240
VpaK11BI GGWCC 2 cut(s) 1108, 1146
XagI CCTNNNNNAGG 3 cut(s) 395, 880, 1083
XapI RAATTY 4 cut(s) 732, 857, 938, 1162
XceI RCATGY 1 cut(s) 1078
XhoI CTCGAG 1 cut(s) 404
XmiI GTMKAC 1 cut(s) 1314
XmnI GAANNNNTTC 2 cut(s) 305, 911
XspI CTAG 3 cut(s) 869, 1085, 1328
ZrmI AGTACT 1 cut(s) 380
Zsp2I ATGCAT 1 cut(s) 539
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.