Rroxscaffold_3G00245440

Benzyl alcohol

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000190
Physical Location & Seq
Forward (+)
38407770 .. 38409310
1541 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00245440.1

Sequence Viewer

Length: 963 bp
ATGGTACTATTTCAGGTTAATCGAACCCATCCACAACTTATAACTCCGGCAAGGCCAACTCCTCGTGAAACAAAGATGCTGTCAGATATAGATGACCAGCAAGGCCTTAAGTTTCAGGCGCCAGTCATTGCAGCCTTCAAGAACAATCCTTCAATGTCGAACCGAAAAGACCCTGTTCAGGTGATCAGGGAAGCAATAAGTAGAGCATTGGTGTATTACTACCCTTTGGCAGGTAGGCTGAGGGAAGGGCCTAACAGAAAGCTTTTGGTGGATTGCAACGGAGAAGGTGTCTTGTTCGTTGGGGCTAATGCTGACGTTACTCTCGAGGAAATTGGAGATGCTATTCTACCCCCTTGCCCTGTGTTAGAGGACTTCCTATGTAATGTCCCGGGCTCGGATGGCATTCTTGGTTGCCCTTTGTTGTTAGTTCAGGTGACCATTTTGAGATGCGGAGGTTTCATACTTGCATTGCGGGTGAACCACACAATGTGTGATGCGCCTGGATTTGTCCTGTTCTTGAACACGGTAGGGGAGATGGTTCAAGGAAAAAGTGCGCCATCTATTCCACCAGTGTGGGAGCGAGAGATCTTGAATGCCCGAGATCCACCACGAATTACATGTATACATCACGAATACGAGGAAATTATTGATGACTACTCAGATGAGGGCTCTGATGCGGCAGTAATAGTGCAAAAATCTGTCTACTTTGGTCCCAATGAGATAAGGGCCATCAAGAAACATCTTCCACCGCACCTTTCCAATTGCTCTACATTCGACCTTATAACATCCTGTTTGTGGAAGTGCCGCACAGTTGCACTAGAACTTAATCCGGAACAGGTTGTTCGGGTTTCATGCATAGTCAATGCACGTGGGGAAGCGCAACAGTCTACGTCTTCCTTTGGGTTACTACGGCAATGCATTCGCATACCCAGCTGCTGTTTCGGGAGTGAAACAATTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Transferase

Protein Analysis

320

Amino Acids

35.31

Weight (kDa)

5.74

Isoelectric Point (pI)

39.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 5 - 292 4.8e-55 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000190)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G03480 AT5G17540
fragaria_vesca FvH4_2g12510 FvH4_3g38880 FvH4_3g40890 FvH4_5g24240 FvH4_5g24250 FvH4_5g24270 FvH4_5g24273 FvH4_6g05391 FvH4_6g05392
malus_domestica MD00G1201900.v1.1 MD00G1202100.v1.1 MD02G1001400.v1.1 MD02G1013900.v1.1 MD02G1014800.v1.1 MD02G1015000.v1.1 MD02G1015200.v1.1 MD03G1080200.v1.1 MD06G1016200.v1.1 MD06G1016500.v1.1 MD06G1017700.v1.1 MD06G1018100.v1.1 MD06G1018200.v1.1 MD06G1018400.v1.1 MD06G1018700.v1.1 MD06G1018800.v1.1 MD06G1019000.v1.1 MD06G1019100.v1.1 MD06G1019300.v1.1 MD06G1019800.v1.1 MD06G1020400.v1.1 MD06G1020700.v1.1 MD06G1020800.v1.1 MD06G1020900.v1.1 MD12G1038300.v1.1 MD12G1039400.v1.1
prunus_persica Prupe.5G017800_v2.0.a1 Prupe.5G017900_v2.0.a1 Prupe.5G018000_v2.0.a1 Prupe.5G018100_v2.0.a1 Prupe.5G018200_v2.0.a1 Prupe.8G000100_v2.0.a1
pyrus_communis pycom02g01330 pycom02g01390 pycom03g06420 pycom06g01300 pycom06g01320 pycom06g01340 pycom06g01500 pycom06g01510 pycom06g01520 pycom12g03300 pycom12g03320
rosa_chinensis RchiOBHm_Chr5g0051841 RchiOBHm_Chr6g0272991 RchiOBHm_Chr7g0213951 RchiOBHm_Chr7g0214051 RchiOBHm_Chr7g0214131 RchiOBHm_Chr7g0214161 RchiOBHm_Chr7g0214231 RchiOBHm_Chr7g0214321 RchiOBHm_Chr7g0214351 RchiOBHm_Chr7g0214391 RchiOBHm_Chr7g0214451 RchiOBHm_Chr7g0222591
rosa_laevigata RLG00000002044 RLG00000002744 RLG00000002751 RLG00000002752 RLG00000002755 RLG00000002756 RLG00000002757 RLG00000002758 RLG00000002762 RLG00000002763 RLG00000013652
rosa_multiflora Rmu_sc0000328.1_g000008 Rmu_sc0003764.1_g000001 Rmu_sc0003764.1_g000002 Rmu_sc0004199.1_g000004 Rmu_sc0004199.1_g000006 Rmu_sc0004199.1_g000014 Rmu_sc0004199.1_g000019 Rmu_sc0004199.1_g000022 Rmu_sc0005063.1_g000018 Rmu_sc0006422.1_g000030 Rmu_sc0006422.1_g000031 Rmu_sc0009579.1_g000011 Rmu_sc0009579.1_g000017 Rmu_sc0016182.1_g000005 Rmu_sc0016182.1_g000007 Rmu_sc0016279.1_g000002 Rmu_ssc0000387.1_g000031
rosa_roxburghii Rroxscaffold_1G00027390 Rroxscaffold_2G00146810 Rroxscaffold_3G00236600 Rroxscaffold_3G00236620 Rroxscaffold_3G00245350 Rroxscaffold_3G00245400 Rroxscaffold_3G00245440 Rroxscaffold_3G00245480 Rroxscaffold_3G00245560 Rroxscaffold_7G00195770
rosa_rugosa Rorug02G0047800 Rorug02G0047900 Rorug05G0276800 Rorug06G0071900 Rorug07G0145400 Rorug07G0145500 Rorug07G0145600 Rorug07G0145700 Rorug07G0145700 Rorug07G0145800 Rorug07G0211200
rosa_samantha Rh5BG359700 Rh6AG187600 Rh6DG181500 Rh7AG278000 Rh7AG278900 Rh7AG279800 Rh7AG279900 Rh7AG280100 Rh7AG280400 Rh7AG280700 Rh7AG281200 Rh7AG354300 Rh7AG354800 Rh7BG272300 Rh7BG272500 Rh7BG272600 Rh7BG272700 Rh7BG272800 Rh7BG273000 Rh7BG343200 Rh7CG297000 Rh7CG297900 Rh7CG298100 Rh7CG298800 Rh7CG299100 Rh7CG299300 Rh7CG299400 Rh7CG300000 Rh7CG300200 Rh7CG300600 Rh7CG371800 Rh7CG371900
rosa_wichuraiana Rw5G032880 Rw6G016270 Rw7G023930 Rw7G023980 Rw7G023990 Rw7G024000 Rw7G024010 Rw7G024020 Rw7G024030 Rw7G029800 Rw7G030090 Rw7G030140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 41, 782
Acc36I ACCTGC 1 cut(s) 221
AccB1I GGYRCC 1 cut(s) 118
AccI GTMKAC 3 cut(s) 622, 702, 887
AccIII TCCGGA 1 cut(s) 829
AciI CCGC 5 cut(s) 450, 472, 677, 749, 805
AclWI GGATC 1 cut(s) 596
AcvI CACGTG 1 cut(s) 869
AcyI GRCGYC 1 cut(s) 119
AdeI CACNNNGTG 1 cut(s) 489
AfaI GTAC 1 cut(s) 6
AfiI CCNNNNNNNGG 4 cut(s) 178, 230, 394, 795
AflII CTTAAG 1 cut(s) 107
AflIII ACRYGT 1 cut(s) 617
AgsI TTSAA 5 cut(s) 139, 153, 520, 542, 592
AjnI CCWGG 1 cut(s) 499
AleI CACNNNNGTG 1 cut(s) 571
AluBI AGCT 2 cut(s) 262, 933
AluI AGCT 2 cut(s) 262, 933
AlwI GGATC 1 cut(s) 596
AlwNI CAGNNNCTG 1 cut(s) 936
Ama87I CYCGRG 3 cut(s) 323, 388, 597
Aor13HI TCCGGA 1 cut(s) 829
AoxI GGCC 4 cut(s) 53, 103, 248, 726
ApeKI GCWGC 2 cut(s) 131, 933
ArsI GACNNNNNNTTYG 2 cut(s) 65, 97
AspLEI GCGC 4 cut(s) 121, 499, 556, 880
AspS9I GGNCC 3 cut(s) 248, 710, 726
AsuC2I CCSGG 2 cut(s) 389, 390
AsuHPI GGTGA 3 cut(s) 193, 445, 487
AvaI CYCGRG 3 cut(s) 323, 388, 597
AvaII GGWCC 1 cut(s) 710
BanI GGYRCC 1 cut(s) 118
BanII GRGCYC 2 cut(s) 395, 671
BauI CACGAG 1 cut(s) 63
BbrPI CACGTG 1 cut(s) 869
BbsI GAAGAC 1 cut(s) 885
BbvCI CCTCAGC 1 cut(s) 239
BbvI GCAGC 2 cut(s) 143, 920
BccI CCATC 5 cut(s) 36, 392, 529, 565, 737
BceAI ACGGC 1 cut(s) 926
BcgI CGANNNNNNTGC 2 cut(s) 902, 936
BciT130I CCWGG 1 cut(s) 501
BclI TGATCA 1 cut(s) 183
BcnI CCSGG 2 cut(s) 389, 390
BfaI CTAG 1 cut(s) 818
BfoI RGCGCY 1 cut(s) 122
BfrI CTTAAG 1 cut(s) 107
BfuAI ACCTGC 1 cut(s) 221
BglII AGATCT 1 cut(s) 585
BisI GCNGC 4 cut(s) 132, 678, 805, 934
BlsI GCNGC 4 cut(s) 133, 679, 806, 935
Bme1390I CCNGG 3 cut(s) 389, 390, 501
Bme18I GGWCC 1 cut(s) 710
BmeT110I CYCGRG 3 cut(s) 323, 388, 597
BmgT120I GGNCC 3 cut(s) 248, 710, 726
BmiI GGNNCC 2 cut(s) 120, 712
BmrFI CCNGG 3 cut(s) 389, 390, 501
BmsI GCATC 5 cut(s) 66, 328, 437, 484, 664
BpiI GAAGAC 1 cut(s) 885
Bpu10I CCTNAGC 1 cut(s) 239
BpuMI CCSGG 2 cut(s) 389, 390
BsaAI YACGTR 1 cut(s) 869
BsaHI GRCGYC 1 cut(s) 119
BsaJI CCNNGG 1 cut(s) 388
BsaWI WCCGGW 1 cut(s) 829
BsaXI ACNNNNNCTCC 2 cut(s) 273, 303
Bsc4I CCNNNNNNNGG 4 cut(s) 178, 230, 394, 795
Bse1I ACTGG 2 cut(s) 122, 569
Bse3DI GCAATG 3 cut(s) 126, 467, 920
BseAI TCCGGA 1 cut(s) 829
BseBI CCWGG 1 cut(s) 501
BseDI CCNNGG 1 cut(s) 388
BseGI GGATG 3 cut(s) 28, 403, 785
BseLI CCNNNNNNNGG 4 cut(s) 178, 230, 394, 795
BseMI GCAATG 3 cut(s) 126, 467, 920
BseMII CTCAG 2 cut(s) 230, 672
BseNI ACTGG 2 cut(s) 122, 569
BseRI GAGGAG 1 cut(s) 51
BseXI GCAGC 2 cut(s) 143, 920
BseYI CCCAGC 1 cut(s) 929
BshFI GGCC 4 cut(s) 55, 105, 250, 728
BshNI GGYRCC 1 cut(s) 118
BsiHKCI CYCGRG 3 cut(s) 323, 388, 597
BsiSI CCGG 3 cut(s) 47, 389, 830
BslFI GGGAC 2 cut(s) 371, 696
BslI CCNNNNNNNGG 4 cut(s) 178, 230, 394, 795
BsmFI GGGAC 2 cut(s) 371, 696
BsmI GAATGC 3 cut(s) 402, 598, 918
BsnI GGCC 4 cut(s) 55, 105, 250, 728
BsoBI CYCGRG 3 cut(s) 323, 388, 597
Bsp1286I GDGCHC 2 cut(s) 395, 671
Bsp13I TCCGGA 1 cut(s) 829
Bsp143I GATC 3 cut(s) 183, 585, 601
BspACI CCGC 5 cut(s) 450, 472, 677, 749, 805
BspANI GGCC 4 cut(s) 55, 105, 250, 728
BspCNI CTCAG 2 cut(s) 231, 671
BspEI TCCGGA 1 cut(s) 829
BspLI GGNNCC 2 cut(s) 120, 712
BspMI ACCTGC 1 cut(s) 221
BspPI GGATC 1 cut(s) 596
BspT107I GGYRCC 1 cut(s) 118
BspTI CTTAAG 1 cut(s) 107
BsrDI GCAATG 3 cut(s) 126, 467, 920
BsrI ACTGG 2 cut(s) 122, 569
BssECI CCNNGG 1 cut(s) 388
BssMI GATC 3 cut(s) 183, 585, 601
BssNAI GTATAC 1 cut(s) 623
BssNI GRCGYC 1 cut(s) 119
BssSI CACGAG 1 cut(s) 63
Bst1107I GTATAC 1 cut(s) 623
Bst2BI CACGAG 1 cut(s) 63
Bst2UI CCWGG 1 cut(s) 501
Bst4CI ACNGT 3 cut(s) 526, 811, 885
BstACI GRCGYC 1 cut(s) 119
BstAFI CTTAAG 1 cut(s) 107
BstBAI YACGTR 1 cut(s) 869
BstDEI CTNAG 2 cut(s) 239, 658
BstEII GGTNACC 1 cut(s) 433
BstENI CCTNNNNNAGG 1 cut(s) 228
BstF5I GGATG 3 cut(s) 28, 403, 785
BstH2I RGCGCY 1 cut(s) 122
BstHHI GCGC 4 cut(s) 121, 499, 556, 880
BstKTI GATC 3 cut(s) 186, 588, 604
BstMBI GATC 3 cut(s) 183, 585, 601
BstMWI GCNNNNNNNGC 2 cut(s) 399, 930
BstNI CCWGG 1 cut(s) 501
BstNSI RCATGY 1 cut(s) 621
BstPI GGTNACC 1 cut(s) 433
BstSCI CCNGG 3 cut(s) 387, 388, 499
BstV1I GCAGC 2 cut(s) 143, 920
BstV2I GAAGAC 1 cut(s) 885
BstX2I RGATCY 2 cut(s) 585, 601
BstXI CCANNNNNNTGG 1 cut(s) 573
BstYI RGATCY 2 cut(s) 585, 601
BstZ17I GTATAC 1 cut(s) 623
BsuRI GGCC 4 cut(s) 55, 105, 250, 728
BtsCI GGATG 3 cut(s) 28, 403, 785
BtsIMutI CAGTG 1 cut(s) 576
BveI ACCTGC 1 cut(s) 221
CaiI CAGNNNCTG 1 cut(s) 936
CfoI GCGC 4 cut(s) 121, 499, 556, 880
Cfr13I GGNCC 3 cut(s) 248, 710, 726
Cfr9I CCCGGG 1 cut(s) 388
Csp6I GTAC 1 cut(s) 5
CspCI CAANNNNNGTGG 2 cut(s) 850, 885
CviAII CATG 2 cut(s) 618, 852
CviQI GTAC 1 cut(s) 5
DdeI CTNAG 2 cut(s) 239, 658
DinI GGCGCC 1 cut(s) 120
DpnI GATC 3 cut(s) 185, 587, 603
DpnII GATC 3 cut(s) 183, 585, 601
DraIII CACNNNGTG 1 cut(s) 489
Eco147I AGGCCT 1 cut(s) 105
Eco24I GRGCYC 2 cut(s) 395, 671
Eco47I GGWCC 1 cut(s) 710
Eco72I CACGTG 1 cut(s) 869
Eco88I CYCGRG 3 cut(s) 323, 388, 597
Eco91I GGTNACC 1 cut(s) 433
EcoNI CCTNNNNNAGG 1 cut(s) 228
EcoO109I RGGNCCY 1 cut(s) 248
EcoO65I GGTNACC 1 cut(s) 433
EcoRII CCWGG 1 cut(s) 499
EcoT22I ATGCAT 2 cut(s) 857, 920
EcoT38I GRGCYC 2 cut(s) 395, 671
EgeI GGCGCC 1 cut(s) 120
EheI GGCGCC 1 cut(s) 120
FaeI CATG 2 cut(s) 621, 855
FaqI GGGAC 2 cut(s) 371, 696
FatI CATG 2 cut(s) 617, 851
FauI CCCGC 1 cut(s) 465
FbaI TGATCA 1 cut(s) 183
FblI GTMKAC 3 cut(s) 622, 702, 887
Fnu4HI GCNGC 4 cut(s) 132, 678, 805, 934
FokI GGATG 3 cut(s) 15, 410, 772
FriOI GRGCYC 2 cut(s) 395, 671
Fsp4HI GCNGC 4 cut(s) 132, 678, 805, 934
FspBI CTAG 1 cut(s) 818
GlaI GCGC 4 cut(s) 120, 498, 555, 879
GluI GCNGC 4 cut(s) 132, 678, 805, 934
GsaI CCCAGC 1 cut(s) 933
HaeII RGCGCY 1 cut(s) 122
HaeIII GGCC 4 cut(s) 55, 105, 250, 728
HapII CCGG 3 cut(s) 47, 389, 830
HhaI GCGC 4 cut(s) 121, 499, 556, 880
Hin1I GRCGYC 1 cut(s) 119
Hin1II CATG 2 cut(s) 621, 855
Hin6I GCGC 4 cut(s) 119, 497, 554, 878
HinP1I GCGC 4 cut(s) 119, 497, 554, 878
HindIII AAGCTT 1 cut(s) 260
HpaII CCGG 3 cut(s) 47, 389, 830
HphI GGTGA 3 cut(s) 193, 445, 487
Hpy166II GTNNAC 4 cut(s) 478, 623, 703, 888
Hpy188I TCNGA 4 cut(s) 85, 397, 661, 673
Hpy188III TCNNGA 9 cut(s) 65, 139, 323, 517, 589, 629, 733, 830, 943
Hpy8I GTNNAC 4 cut(s) 478, 623, 703, 888
HpyAV CCTTC 4 cut(s) 145, 159, 239, 278
HpyCH4III ACNGT 3 cut(s) 526, 811, 885
HpyCH4IV ACGT 3 cut(s) 315, 868, 890
HpyCH4V TGCA 8 cut(s) 131, 276, 467, 691, 815, 855, 866, 918
HpyF10VI GCNNNNNNNGC 2 cut(s) 399, 930
HpyF3I CTNAG 2 cut(s) 239, 658
HpySE526I ACGT 3 cut(s) 315, 868, 890
Hsp92I GRCGYC 1 cut(s) 119
Hsp92II CATG 2 cut(s) 621, 855
HspAI GCGC 4 cut(s) 119, 497, 554, 878
KasI GGCGCC 1 cut(s) 118
Kpn2I TCCGGA 1 cut(s) 829
Ksp22I TGATCA 1 cut(s) 183
Kzo9I GATC 3 cut(s) 183, 585, 601
LmnI GCTCC 1 cut(s) 577
Lsp1109I GCAGC 2 cut(s) 143, 920
LweI GCATC 5 cut(s) 66, 328, 437, 484, 664
MaeI CTAG 1 cut(s) 818
MaeII ACGT 3 cut(s) 315, 868, 890
MaeIII GTNAC 3 cut(s) 316, 433, 903
MalI GATC 3 cut(s) 185, 587, 603
MboI GATC 3 cut(s) 183, 585, 601
MboII GAAGA 2 cut(s) 734, 885
MfeI CAATTG 2 cut(s) 760, 954
MflI RGATCY 2 cut(s) 585, 601
MhlI GDGCHC 2 cut(s) 395, 671
MluCI AATT 5 cut(s) 330, 612, 642, 760, 954
Mly113I GGCGCC 1 cut(s) 119
MnlI CCTC 7 cut(s) 72, 234, 319, 361, 446, 631, 658
Mph1103I ATGCAT 2 cut(s) 857, 920
MroI TCCGGA 1 cut(s) 829
MseI TTAA 3 cut(s) 18, 108, 825
MslI CAYNNNNRTG 1 cut(s) 571
MspA1I CMGCKG 1 cut(s) 933
MspCI CTTAAG 1 cut(s) 107
MspI CCGG 3 cut(s) 47, 389, 830
MspR9I CCNGG 3 cut(s) 389, 390, 501
MunI CAATTG 2 cut(s) 760, 954
Mva1269I GAATGC 3 cut(s) 402, 598, 918
MvaI CCWGG 1 cut(s) 501
MwoI GCNNNNNNNGC 2 cut(s) 399, 930
NarI GGCGCC 1 cut(s) 119
NciI CCSGG 2 cut(s) 389, 390
NdeII GATC 3 cut(s) 183, 585, 601
NlaIII CATG 2 cut(s) 621, 855
NlaIV GGNNCC 2 cut(s) 120, 712
NmuCI GTSAC 1 cut(s) 433
NsiI ATGCAT 2 cut(s) 857, 920
NspI RCATGY 1 cut(s) 621
OliI CACNNNNGTG 1 cut(s) 571
PaeR7I CTCGAG 1 cut(s) 323
PceI AGGCCT 1 cut(s) 105
PciI ACATGT 1 cut(s) 617
PcsI WCGNNNNNNNCGW 1 cut(s) 321
PctI GAATGC 3 cut(s) 402, 598, 918
PkrI GCNGC 4 cut(s) 133, 679, 806, 935
PluTI GGCGCC 1 cut(s) 122
PmaCI CACGTG 1 cut(s) 869
PmlI CACGTG 1 cut(s) 869
Ppu21I YACGTR 1 cut(s) 869
PscI ACATGT 1 cut(s) 617
PsiI TTATAA 2 cut(s) 41, 782
Psp6I CCWGG 1 cut(s) 499
PspCI CACGTG 1 cut(s) 869
PspEI GGTNACC 1 cut(s) 433
PspFI CCCAGC 1 cut(s) 929
PspGI CCWGG 1 cut(s) 499
PspN4I GGNNCC 2 cut(s) 120, 712
PspPI GGNCC 3 cut(s) 248, 710, 726
PstNI CAGNNNCTG 1 cut(s) 936
PsuI RGATCY 2 cut(s) 585, 601
PvuII CAGCTG 1 cut(s) 933
RsaI GTAC 1 cut(s) 6
RsaNI GTAC 1 cut(s) 5
RseI CAYNNNNRTG 1 cut(s) 571
SaqAI TTAA 3 cut(s) 18, 108, 825
SatI GCNGC 4 cut(s) 132, 678, 805, 934
Sau3AI GATC 3 cut(s) 183, 585, 601
Sau96I GGNCC 3 cut(s) 248, 710, 726
ScrFI CCNGG 3 cut(s) 389, 390, 501
SduI GDGCHC 2 cut(s) 395, 671
SfaNI GCATC 5 cut(s) 66, 328, 437, 484, 664
SfoI GGCGCC 1 cut(s) 120
Sfr274I CTCGAG 1 cut(s) 323
SinI GGWCC 1 cut(s) 710
SlaI CTCGAG 1 cut(s) 323
SmaI CCCGGG 1 cut(s) 390
SmiMI CAYNNNNRTG 1 cut(s) 571
SmlI CTYRAG 2 cut(s) 107, 323
SmoI CTYRAG 2 cut(s) 107, 323
Sse9I AATT 5 cut(s) 330, 612, 642, 760, 954
SseBI AGGCCT 1 cut(s) 105
SsiI CCGC 5 cut(s) 450, 472, 677, 749, 805
SspDI GGCGCC 1 cut(s) 118
SspMI CTAG 1 cut(s) 818
StuI AGGCCT 1 cut(s) 105
StyD4I CCNGG 3 cut(s) 387, 388, 499
TaaI ACNGT 3 cut(s) 526, 811, 885
TaiI ACGT 3 cut(s) 318, 871, 893
TaqI TCGA 4 cut(s) 22, 158, 324, 774
TasI AATT 5 cut(s) 330, 612, 642, 760, 954
TauI GCSGC 2 cut(s) 680, 807
Tru1I TTAA 3 cut(s) 18, 108, 825
Tru9I TTAA 3 cut(s) 18, 108, 825
TscAI CASTG 1 cut(s) 576
TseFI GTSAC 1 cut(s) 433
TseI GCWGC 2 cut(s) 131, 933
Tsp45I GTSAC 1 cut(s) 433
TspDTI ATGAA 2 cut(s) 448, 840
TspGWI ACGGA 1 cut(s) 294
TspMI CCCGGG 1 cut(s) 388
TspRI CASTG 1 cut(s) 576
Vha464I CTTAAG 1 cut(s) 107
VpaK11BI GGWCC 1 cut(s) 710
XagI CCTNNNNNAGG 1 cut(s) 228
XceI RCATGY 1 cut(s) 621
XhoI CTCGAG 1 cut(s) 323
XmaI CCCGGG 1 cut(s) 388
XmiI GTMKAC 3 cut(s) 622, 702, 887
XspI CTAG 1 cut(s) 818
Zsp2I ATGCAT 2 cut(s) 857, 920
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.